Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTTTTCCCTTCTTCCCCTTCCTCACGATTTTTCCATTCCTTCCAAAGTTAATCAAGCCTGCCCCCGTCGTCGCACCTCAGCCGATGCCTCATCGTATGCCTCCAATGCTAACTCCAGTCGCAAGCTCAACCAAATCAGACTCCTACTGCTACCGTGATGCTAATTCTAGCCATGCTGCAACATCTGACTCACCCAAATCTGACTCCAGTCGCCTCCTTCATCTCCACTAGCCCTAATTTCCAAATCCCACAATAACATCCCAATTTGA
mRNA sequence
ATGATTTTTCCCTTCTTCCCCTTCCTCACGATTTTTCCATTCCTTCCAAAGTTAATCAAGCCTGCCCCCGTCGTCGCACCTCAGCCGATGCCTCATCGTATGCCTCCAATGCTAACTCCAGTCGCAAGCTCAACCAAATCAGACTCCTACTGCTACCGTGATGCTAATTCTAGCCATGCTTCGCCTCCTTCATCTCCACTAGCCCTAATTTCCAAATCCCACAATAACATCCCAATTTGA
Coding sequence (CDS)
ATGATTTTTCCCTTCTTCCCCTTCCTCACGATTTTTCCATTCCTTCCAAAGTTAATCAAGCCTGCCCCCGTCGTCGCACCTCAGCCGATGCCTCATCGTATGCCTCCAATGCTAACTCCAGTCGCAAGCTCAACCAAATCAGACTCCTACTGCTACCGTGATGCTAATTCTAGCCATGCTTCGCCTCCTTCATCTCCACTAGCCCTAATTTCCAAATCCCACAATAACATCCCAATTTGA
Protein sequence
MIFPFFPFLTIFPFLPKLIKPAPVVAPQPMPHRMPPMLTPVASSTKSDSYCYRDANSSHASPPSSPLALISKSHNNIPI
Homology
BLAST of IVF0003739 vs. ExPASy TrEMBL
Match:
A0A5D3BWD1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold121G00060 PE=4 SV=1)
HSP 1 Score: 132.1 bits (331), Expect = 1.0e-27
Identity = 72/90 (80.00%), Postives = 74/90 (82.22%), Query Frame = 0
Query: 1 MIFPFFPFLTIFPFLPKLIKPAPVVAPQPMPHRMPPMLTPVASSTKSDSYCYRDANSSHA 60
MIFPFFPF TIFPFLPKLI PAP+ APQ MPHRMPPMLTPVASSTKSDSYCYRDANSSHA
Sbjct: 1 MIFPFFPFPTIFPFLPKLITPAPITAPQLMPHRMPPMLTPVASSTKSDSYCYRDANSSHA 60
Query: 61 S-----------PPSSPLALISKSHNNIPI 80
+ PPSSPLALI KSHNNIPI
Sbjct: 61 ATSNAAQIRLQPPPSSPLALICKSHNNIPI 90
BLAST of IVF0003739 vs. ExPASy TrEMBL
Match:
A0A5A7V9W6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold632G00010 PE=4 SV=1)
HSP 1 Score: 123.2 bits (308), Expect = 4.7e-25
Identity = 69/90 (76.67%), Postives = 71/90 (78.89%), Query Frame = 0
Query: 1 MIFPFFPFLTIFPFLPKLIKPAPVVAPQPMPHRMPPMLTPVASSTKSDSYCYRDANSSHA 60
MIFPFFPF TI FLPKLI AP+ PQPMPHRMPPMLTPVASSTKSDSYCYRDANSS A
Sbjct: 1 MIFPFFPFPTIVSFLPKLITSAPIDTPQPMPHRMPPMLTPVASSTKSDSYCYRDANSSRA 60
Query: 61 S-----------PPSSPLALISKSHNNIPI 80
+ PPSSPLALISKSHNNIPI
Sbjct: 61 ATSDAAQIRLQPPPSSPLALISKSHNNIPI 90
BLAST of IVF0003739 vs. ExPASy TrEMBL
Match:
A0A5A7U6M1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold323G00630 PE=4 SV=1)
HSP 1 Score: 121.7 bits (304), Expect = 1.4e-24
Identity = 62/66 (93.94%), Postives = 63/66 (95.45%), Query Frame = 0
Query: 1 MIFPFFPFLTIFPFLPKLIKPAPVVAPQPMPHRMPPMLTPVASSTKSDSYCYRDANSSHA 60
MIFPFFPFLTIFPFLPKLIKPAPVVAPQPMPHRMPPMLTPVASSTKSDSYCYRDANSSHA
Sbjct: 1 MIFPFFPFLTIFPFLPKLIKPAPVVAPQPMPHRMPPMLTPVASSTKSDSYCYRDANSSHA 60
Query: 61 SPPSSP 67
+ SP
Sbjct: 61 ATSDSP 66
BLAST of IVF0003739 vs. ExPASy TrEMBL
Match:
A0A5D3C069 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G001210 PE=4 SV=1)
HSP 1 Score: 112.5 bits (280), Expect = 8.3e-22
Identity = 62/80 (77.50%), Postives = 64/80 (80.00%), Query Frame = 0
Query: 11 IFPFLPKLIKPAPVVAPQPMPHRMPPMLTPVASSTKSDSYCYRDANSSHAS--------- 70
IFPFLPKLI PAPV APQ MPHRMPPM TP+ASSTKSDSYCYRDANSS A+
Sbjct: 2 IFPFLPKLIIPAPVAAPQSMPHRMPPMPTPIASSTKSDSYCYRDANSSRAATSDATQIRL 61
Query: 71 --PPSSPLALISKSHNNIPI 80
PPSSPLALISKSHNNIPI
Sbjct: 62 QPPPSSPLALISKSHNNIPI 81
BLAST of IVF0003739 vs. ExPASy TrEMBL
Match:
A0A5D3CSE0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold832G001680 PE=4 SV=1)
HSP 1 Score: 100.1 bits (248), Expect = 4.3e-18
Identity = 52/61 (85.25%), Postives = 54/61 (88.52%), Query Frame = 0
Query: 1 MIFPFFPFLTIFPFLPKLIKPAPVVAPQPMPHRMPPMLTPVASSTKSDSYCYRDANSSHA 60
MIFPFF F TIFPFLPK+I APV APQPMPHRMPPMLTPVASSTKSDSYCYRDANSS
Sbjct: 1 MIFPFFSFPTIFPFLPKVITLAPVAAPQPMPHRMPPMLTPVASSTKSDSYCYRDANSSRT 60
Query: 61 S 62
+
Sbjct: 61 A 61
BLAST of IVF0003739 vs. NCBI nr
Match:
KAA0033001.1 (uncharacterized protein E6C27_scaffold269G00940 [Cucumis melo var. makuwa] >TYK03410.1 uncharacterized protein E5676_scaffold121G00060 [Cucumis melo var. makuwa])
HSP 1 Score: 131 bits (330), Expect = 6.33e-38
Identity = 72/90 (80.00%), Postives = 74/90 (82.22%), Query Frame = 0
Query: 1 MIFPFFPFLTIFPFLPKLIKPAPVVAPQPMPHRMPPMLTPVASSTKSDSYCYRDANSSHA 60
MIFPFFPF TIFPFLPKLI PAP+ APQ MPHRMPPMLTPVASSTKSDSYCYRDANSSHA
Sbjct: 1 MIFPFFPFPTIFPFLPKLITPAPITAPQLMPHRMPPMLTPVASSTKSDSYCYRDANSSHA 60
Query: 61 S-----------PPSSPLALISKSHNNIPI 79
+ PPSSPLALI KSHNNIPI
Sbjct: 61 ATSNAAQIRLQPPPSSPLALICKSHNNIPI 90
BLAST of IVF0003739 vs. NCBI nr
Match:
KAA0062675.1 (uncharacterized protein E6C27_scaffold1576G00010 [Cucumis melo var. makuwa] >TYK08457.1 uncharacterized protein E5676_scaffold632G00010 [Cucumis melo var. makuwa])
HSP 1 Score: 122 bits (307), Expect = 2.04e-34
Identity = 69/90 (76.67%), Postives = 71/90 (78.89%), Query Frame = 0
Query: 1 MIFPFFPFLTIFPFLPKLIKPAPVVAPQPMPHRMPPMLTPVASSTKSDSYCYRDANSSHA 60
MIFPFFPF TI FLPKLI AP+ PQPMPHRMPPMLTPVASSTKSDSYCYRDANSS A
Sbjct: 1 MIFPFFPFPTIVSFLPKLITSAPIDTPQPMPHRMPPMLTPVASSTKSDSYCYRDANSSRA 60
Query: 61 S-----------PPSSPLALISKSHNNIPI 79
+ PPSSPLALISKSHNNIPI
Sbjct: 61 ATSDAAQIRLQPPPSSPLALISKSHNNIPI 90
BLAST of IVF0003739 vs. NCBI nr
Match:
KAA0050820.1 (uncharacterized protein E6C27_scaffold404G00780 [Cucumis melo var. makuwa] >TYK08525.1 uncharacterized protein E5676_scaffold323G00630 [Cucumis melo var. makuwa])
HSP 1 Score: 121 bits (304), Expect = 4.01e-34
Identity = 62/66 (93.94%), Postives = 63/66 (95.45%), Query Frame = 0
Query: 1 MIFPFFPFLTIFPFLPKLIKPAPVVAPQPMPHRMPPMLTPVASSTKSDSYCYRDANSSHA 60
MIFPFFPFLTIFPFLPKLIKPAPVVAPQPMPHRMPPMLTPVASSTKSDSYCYRDANSSHA
Sbjct: 1 MIFPFFPFLTIFPFLPKLIKPAPVVAPQPMPHRMPPMLTPVASSTKSDSYCYRDANSSHA 60
Query: 61 SPPSSP 66
+ SP
Sbjct: 61 ATSDSP 66
BLAST of IVF0003739 vs. NCBI nr
Match:
KAA0042899.1 (uncharacterized protein E6C27_scaffold44G004160 [Cucumis melo var. makuwa] >TYK05301.1 uncharacterized protein E5676_scaffold108G001210 [Cucumis melo var. makuwa])
HSP 1 Score: 111 bits (278), Expect = 4.15e-30
Identity = 62/80 (77.50%), Postives = 64/80 (80.00%), Query Frame = 0
Query: 11 IFPFLPKLIKPAPVVAPQPMPHRMPPMLTPVASSTKSDSYCYRDANSSHAS--------- 70
IFPFLPKLI PAPV APQ MPHRMPPM TP+ASSTKSDSYCYRDANSS A+
Sbjct: 2 IFPFLPKLIIPAPVAAPQSMPHRMPPMPTPIASSTKSDSYCYRDANSSRAATSDATQIRL 61
Query: 71 --PPSSPLALISKSHNNIPI 79
PPSSPLALISKSHNNIPI
Sbjct: 62 QPPPSSPLALISKSHNNIPI 81
BLAST of IVF0003739 vs. NCBI nr
Match:
KAA0037112.1 (uncharacterized protein E6C27_scaffold379G00130 [Cucumis melo var. makuwa] >TYK13964.1 uncharacterized protein E5676_scaffold832G001680 [Cucumis melo var. makuwa])
HSP 1 Score: 99.8 bits (247), Expect = 1.55e-25
Identity = 52/58 (89.66%), Postives = 53/58 (91.38%), Query Frame = 0
Query: 1 MIFPFFPFLTIFPFLPKLIKPAPVVAPQPMPHRMPPMLTPVASSTKSDSYCYRDANSS 58
MIFPFF F TIFPFLPK+I APV APQPMPHRMPPMLTPVASSTKSDSYCYRDANSS
Sbjct: 1 MIFPFFSFPTIFPFLPKVITLAPVAAPQPMPHRMPPMLTPVASSTKSDSYCYRDANSS 58
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3BWD1 | 1.0e-27 | 80.00 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7V9W6 | 4.7e-25 | 76.67 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7U6M1 | 1.4e-24 | 93.94 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5D3C069 | 8.3e-22 | 77.50 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5D3CSE0 | 4.3e-18 | 85.25 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
Match Name | E-value | Identity | Description | |
KAA0033001.1 | 6.33e-38 | 80.00 | uncharacterized protein E6C27_scaffold269G00940 [Cucumis melo var. makuwa] >TYK0... | [more] |
KAA0062675.1 | 2.04e-34 | 76.67 | uncharacterized protein E6C27_scaffold1576G00010 [Cucumis melo var. makuwa] >TYK... | [more] |
KAA0050820.1 | 4.01e-34 | 93.94 | uncharacterized protein E6C27_scaffold404G00780 [Cucumis melo var. makuwa] >TYK0... | [more] |
KAA0042899.1 | 4.15e-30 | 77.50 | uncharacterized protein E6C27_scaffold44G004160 [Cucumis melo var. makuwa] >TYK0... | [more] |
KAA0037112.1 | 1.55e-25 | 89.66 | uncharacterized protein E6C27_scaffold379G00130 [Cucumis melo var. makuwa] >TYK1... | [more] |
Match Name | E-value | Identity | Description | |