|
|
Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGCTACTACTCGATGGAACGACACGGCAAAAGACGACTGGTTACGATGCAGGAGACATGGCGGTCGATGGCGTTTCGTGGTGGCTGTCGAACAGAGACAATCGGTGAGTCAAGCGACGGGAAACGACAGATGGAGGAGAATGACGACGACGACGACGGCTCTTGATTTCTAG mRNA sequence ATGGCTACTACTCGATGGAACGACACGGCAAAAGACGACTGGTTACGATGCAGGAGACATGGCGGTCGATGGCGTTTCGTGGTGGCTGTCGAACAGAGACAATCGGTGAGTCAAGCGACGGGAAACGACAGATGGAGGAGAATGACGACGACGACGACGGCTCTTGATTTCTAG Coding sequence (CDS) ATGGCTACTACTCGATGGAACGACACGGCAAAAGACGACTGGTTACGATGCAGGAGACATGGCGGTCGATGGCGTTTCGTGGTGGCTGTCGAACAGAGACAATCGGTGAGTCAAGCGACGGGAAACGACAGATGGAGGAGAATGACGACGACGACGACGGCTCTTGATTTCTAG Protein sequence MATTRWNDTAKDDWLRCRRHGGRWRFVVAVEQRQSVSQATGNDRWRRMTTTTTALDF
Homology
BLAST of IVF0001615 vs. ExPASy TrEMBL
Match: A0A5A7VKU9 (Transformation/transcription domain-associated protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2484G00340 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 5.4e-07 Identity = 32/54 (59.26%), Postives = 38/54 (70.37%), Query Frame = 0
Query: 4 TRWNDTAKDDWLRCRRHGGRWRFVVAVEQRQSVSQATGNDRWRRMTTTTTALDF 58
TR +D D+WLR RRH GR F+VA E+R+SVS+ATGN R RR T ALDF
Sbjct: 218 TRQDDMVVDNWLRWRRHDGRRHFMVANERRRSVSRATGNGRQRRTMTPVAALDF 271
BLAST of IVF0001615 vs. NCBI nr
Match: KAA0067827.1 (transformation/transcription domain-associated protein-like [Cucumis melo var. makuwa]) HSP 1 Score: 60.8 bits (146), Expect = 4.59e-09 Identity = 32/54 (59.26%), Postives = 38/54 (70.37%), Query Frame = 0
Query: 4 TRWNDTAKDDWLRCRRHGGRWRFVVAVEQRQSVSQATGNDRWRRMTTTTTALDF 57
TR +D D+WLR RRH GR F+VA E+R+SVS+ATGN R RR T ALDF
Sbjct: 218 TRQDDMVVDNWLRWRRHDGRRHFMVANERRRSVSRATGNGRQRRTMTPVAALDF 271
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7VKU9 | 5.4e-07 | 59.26 | Transformation/transcription domain-associated protein-like OS=Cucumis melo var.... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAA0067827.1 | 4.59e-09 | 59.26 | transformation/transcription domain-associated protein-like [Cucumis melo var. m... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
|
