HG10021649 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATCTGCTTGGAGACGATCCTCTTGTACCTCCTCGGAATAACGTCCAACAAAATGGAGATCAACAACCACAACCACAACCAGTTGTAGACCCACGAAACCCCATCTTCATAGCAGATGATAGGGACAGAGCCATCAGAGATTATGCTGCGCCCACATTTCAAACTTTGGACACTAGCATCCTCGATCCACCAATTGATGTGCCCACATTTGAAATGAAACCACTTATGTTTCAAAACTCATTTGGTCAATTTGCCCAGCTACCTAATGAAGACCCCCACAAACGTCTTATACTTTTTATGAGAATCTACCATTCGTTTAAAGTTAATGGTGTTTCTGAAGAGGCATTGAGACTTAAGTTGTTTCCTTACTTTTTGCAAGGAGATGCTAAAGCATGA ATGAATCTGCTTGGAGACGATCCTCTTGTACCTCCTCGGAATAACGTCCAACAAAATGGAGATCAACAACCACAACCACAACCAGTTGTAGACCCACGAAACCCCATCTTCATAGCAGATGATAGGGACAGAGCCATCAGAGATTATGCTGCGCCCACATTTCAAACTTTGGACACTAGCATCCTCGATCCACCAATTGATGTGCCCACATTTGAAATGAAACCACTTATGTTTCAAAACTCATTTGGTCAATTTGCCCAGCTACCTAATGAAGACCCCCACAAACGTCTTATACTTTTTATGAGAATCTACCATTCGTTTAAAGTTAATGGTGTTTCTGAAGAGGCATTGAGACTTAAGTTGTTTCCTTACTTTTTGCAAGGAGATGCTAAAGCATGA ATGAATCTGCTTGGAGACGATCCTCTTGTACCTCCTCGGAATAACGTCCAACAAAATGGAGATCAACAACCACAACCACAACCAGTTGTAGACCCACGAAACCCCATCTTCATAGCAGATGATAGGGACAGAGCCATCAGAGATTATGCTGCGCCCACATTTCAAACTTTGGACACTAGCATCCTCGATCCACCAATTGATGTGCCCACATTTGAAATGAAACCACTTATGTTTCAAAACTCATTTGGTCAATTTGCCCAGCTACCTAATGAAGACCCCCACAAACGTCTTATACTTTTTATGAGAATCTACCATTCGTTTAAAGTTAATGGTGTTTCTGAAGAGGCATTGAGACTTAAGTTGTTTCCTTACTTTTTGCAAGGAGATGCTAAAGCATGA MNLLGDDPLVPPRNNVQQNGDQQPQPQPVVDPRNPIFIADDRDRAIRDYAAPTFQTLDTSILDPPIDVPTFEMKPLMFQNSFGQFAQLPNEDPHKRLILFMRIYHSFKVNGVSEEALRLKLFPYFLQGDAKA Homology
BLAST of HG10021649 vs. NCBI nr
Match: ERM93404.1 (hypothetical protein AMTR_s04947p00003620 [Amborella trichopoda]) HSP 1 Score: 114.0 bits (284), Expect = 9.8e-22 Identity = 55/101 (54.46%), Postives = 71/101 (70.30%), Query Frame = 0
BLAST of HG10021649 vs. NCBI nr
Match: XP_017216983.1 (PREDICTED: uncharacterized protein LOC108194534 [Daucus carota subsp. sativus]) HSP 1 Score: 113.6 bits (283), Expect = 1.3e-21 Identity = 55/97 (56.70%), Postives = 70/97 (72.16%), Query Frame = 0
BLAST of HG10021649 vs. NCBI nr
Match: ERM93434.1 (hypothetical protein AMTR_s03373p00007640 [Amborella trichopoda]) HSP 1 Score: 112.8 bits (281), Expect = 2.2e-21 Identity = 56/101 (55.45%), Postives = 71/101 (70.30%), Query Frame = 0
BLAST of HG10021649 vs. NCBI nr
Match: XP_030497803.1 (uncharacterized protein LOC115713460 [Cannabis sativa]) HSP 1 Score: 112.5 bits (280), Expect = 2.9e-21 Identity = 56/101 (55.45%), Postives = 70/101 (69.31%), Query Frame = 0
BLAST of HG10021649 vs. NCBI nr
Match: XP_030508936.1 (uncharacterized protein LOC115723589 [Cannabis sativa]) HSP 1 Score: 112.1 bits (279), Expect = 3.7e-21 Identity = 56/101 (55.45%), Postives = 70/101 (69.31%), Query Frame = 0
BLAST of HG10021649 vs. ExPASy TrEMBL
Match: U5CUI2 (Retrotrans_gag domain-containing protein OS=Amborella trichopoda OX=13333 GN=AMTR_s04947p00003620 PE=4 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 4.8e-22 Identity = 55/101 (54.46%), Postives = 71/101 (70.30%), Query Frame = 0
BLAST of HG10021649 vs. ExPASy TrEMBL
Match: U5CUK7 (Uncharacterized protein OS=Amborella trichopoda OX=13333 GN=AMTR_s03373p00007640 PE=4 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 1.1e-21 Identity = 56/101 (55.45%), Postives = 71/101 (70.30%), Query Frame = 0
BLAST of HG10021649 vs. ExPASy TrEMBL
Match: A0A2P5CXX0 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_113560 PE=4 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 9.3e-18 Identity = 52/106 (49.06%), Postives = 68/106 (64.15%), Query Frame = 0
BLAST of HG10021649 vs. ExPASy TrEMBL
Match: A0A1U8PGE2 (uncharacterized protein LOC107941998 OS=Gossypium hirsutum OX=3635 GN=LOC107958895 PE=4 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 1.2e-17 Identity = 54/114 (47.37%), Postives = 73/114 (64.04%), Query Frame = 0
BLAST of HG10021649 vs. ExPASy TrEMBL
Match: W9RHB3 (Putative disease resistance RPP13-like protein 1 OS=Morus notabilis OX=981085 GN=L484_000983 PE=4 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 2.7e-17 Identity = 51/112 (45.54%), Postives = 69/112 (61.61%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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