Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTCCTCAGCGCAGGGCATGGCTTTTTGACAAACATTTGCTAATCCTGGAAGAACCGAATGTTGACTTGAAGCTTTCAGATTTGAAATTCGACAAAGTAACATTCTGGATCCGCTTGTTGGATCTTCCCTTTGGTTTCCAGAATAAAACAATGGCAAGGAGGATTGGGGAAGCAATTGGTGTTTTTCTTGATGTGGACTGCAATCAAGATGGTTTGTGTTGGGGAGAGTCTATGAGAATCAAAGTTCAATTTGATATTTCTAAGCCACTCTGAAGTGGTATCAAGGTTCAAACTGCGGATGGAAAAGGAGAAAGATAGGTGTCAATTCGTTATGAAAGACTGCTTGATTTTTGTTACCTTTGTGGTTGTATTGACCATGTTGCCAAAGATTGTAATTCAGATTTATCTATTCTTGATGGAAAAAGAAGGAGCAACCCTCAGTTGGTCCTTGGCTAAGGTTTCAAGGGGCTACAAGATTACCAAAGAAATTATCCGACTCTCCTGAAGACCCCATCTTCCAGAATGATCTCCACTCCTCTCATCCTTCTAACCCAATTACTCCCCTTGTTGTTGAACAAGCTCCCTCAAACTCACCTGTAGTTAACCCTCCAAGTCCTCTTGTGATTGATCTAAATAAAACTCAAGTGTCTGAGATTCAGTGTGAGAATAGATCTTTATTTGATGCCCCCTTGGTCCCTTCGCTCTCCTCCACTTTATTAAACTCTGTTCACCCTTCCTTGGGTTCTTTTCATCAAGATTCTAACTGCTTCACCTTTCAAATGTCTGATACCTCCCTGGAAAAACCTGTTCAAGATGAACGTATTTATATTATTCTGCCTTGTAAAACCACTAAATCGAGGAAGAAAAAAAAACAAGTTCAATTTTTGGTTCTCCAACTCGTTACGTCTGCTTGGGTCAAGTTGGAAAAAAAACATCCTTGTGATGATGTACTAGATGTTCTCAGAAGAAAGAAATTGTGGGCCTCCTCTCTAGAACAATGA
mRNA sequence
ATGGGTCCTCAGCGCAGGGCATGGCTTTTTGACAAACATTTGCTAATCCTGGAAGAACCGAATGTTGACTTGAAGCTTTCAGATTTGAAATTCGACAAAGTAACATTCTGGATCCGCTTGTTGGATCTTCCCTTTGGTTTCCAGAATAAAACAATGGCAAGGAGGATTGGGGAAGCAATTGGTGTTTTTCTTGATGTGGACTGCAATCAAGATGGTTTGTGTTGGGGAGAGTCTATGAGAATCAAAAAGGAGCAACCCTCAGTTGGTCCTTGGCTAAGGTTTCAAGGGGCTACAAGATTACCAAAGAAATTATCCGACTCTCCTGAAGACCCCATCTTCCAGAATGATCTCCACTCCTCTCATCCTTCTAACCCAATTACTCCCCTTGTTGTTGAACAAGCTCCCTCAAACTCACCTGTAGTTAACCCTCCAAGTCCTCTTGTGATTGATCTAAATAAAACTCAAGTGTCTGAGATTCAGTGTGAGAATAGATCTTTATTTGATGCCCCCTTGGTCCCTTCGCTCTCCTCCACTTTATTAAACTCTGTTCACCCTTCCTTGGGTTCTTTTCATCAAGATTCTAACTGCTTCACCTTTCAAATGTCTGATACCTCCCTGGAAAAACCTGTTCAAGATGAACGTATTTATATTATTCTGCCTTGTAAAACCACTAAATCGAGGAAGAAAAAAAAACAAGTTCAATTTTTGGTTCTCCAACTCGTTACGTCTGCTTGGGTCAAGTTGGAAAAAAAACATCCTTGTGATGATGTACTAGATGTTCTCAGAAGAAAGAAATTGTGGGCCTCCTCTCTAGAACAATGA
Coding sequence (CDS)
ATGGGTCCTCAGCGCAGGGCATGGCTTTTTGACAAACATTTGCTAATCCTGGAAGAACCGAATGTTGACTTGAAGCTTTCAGATTTGAAATTCGACAAAGTAACATTCTGGATCCGCTTGTTGGATCTTCCCTTTGGTTTCCAGAATAAAACAATGGCAAGGAGGATTGGGGAAGCAATTGGTGTTTTTCTTGATGTGGACTGCAATCAAGATGGTTTGTGTTGGGGAGAGTCTATGAGAATCAAAAAGGAGCAACCCTCAGTTGGTCCTTGGCTAAGGTTTCAAGGGGCTACAAGATTACCAAAGAAATTATCCGACTCTCCTGAAGACCCCATCTTCCAGAATGATCTCCACTCCTCTCATCCTTCTAACCCAATTACTCCCCTTGTTGTTGAACAAGCTCCCTCAAACTCACCTGTAGTTAACCCTCCAAGTCCTCTTGTGATTGATCTAAATAAAACTCAAGTGTCTGAGATTCAGTGTGAGAATAGATCTTTATTTGATGCCCCCTTGGTCCCTTCGCTCTCCTCCACTTTATTAAACTCTGTTCACCCTTCCTTGGGTTCTTTTCATCAAGATTCTAACTGCTTCACCTTTCAAATGTCTGATACCTCCCTGGAAAAACCTGTTCAAGATGAACGTATTTATATTATTCTGCCTTGTAAAACCACTAAATCGAGGAAGAAAAAAAAACAAGTTCAATTTTTGGTTCTCCAACTCGTTACGTCTGCTTGGGTCAAGTTGGAAAAAAAACATCCTTGTGATGATGTACTAGATGTTCTCAGAAGAAAGAAATTGTGGGCCTCCTCTCTAGAACAATGA
Protein sequence
MGPQRRAWLFDKHLLILEEPNVDLKLSDLKFDKVTFWIRLLDLPFGFQNKTMARRIGEAIGVFLDVDCNQDGLCWGESMRIKKEQPSVGPWLRFQGATRLPKKLSDSPEDPIFQNDLHSSHPSNPITPLVVEQAPSNSPVVNPPSPLVIDLNKTQVSEIQCENRSLFDAPLVPSLSSTLLNSVHPSLGSFHQDSNCFTFQMSDTSLEKPVQDERIYIILPCKTTKSRKKKKQVQFLVLQLVTSAWVKLEKKHPCDDVLDVLRRKKLWASSLEQ
Homology
BLAST of HG10009771 vs. NCBI nr
Match:
XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia])
HSP 1 Score: 97.8 bits (242), Expect = 1.5e-16
Identity = 40/75 (53.33%), Postives = 55/75 (73.33%), Query Frame = 0
Query: 8 WLFDKHLLILEEPNVDLKLSDLKFDKVTFWIRLLDLPFGFQNKTMARRIGEAIGVFLDVD 67
W FDK L++L++P +S+L+F++V FWI L DLP + NKTMA R+G AIG F+DVD
Sbjct: 100 WFFDKALIVLQKPCSSKNISELEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVD 159
Query: 68 CNQDGLCWGESMRIK 83
CN+ G WG S+RI+
Sbjct: 160 CNEKGFSWGASLRIR 174
BLAST of HG10009771 vs. NCBI nr
Match:
XP_028063997.1 (uncharacterized protein LOC114267184 [Camellia sinensis])
HSP 1 Score: 83.2 bits (204), Expect = 3.8e-12
Identity = 40/106 (37.74%), Postives = 62/106 (58.49%), Query Frame = 0
Query: 8 WLFDKHLLILEEPNVDLKLSDLKFDKVTFWIRLLDLPFGFQNKTMARRIGEAIGVFLDVD 67
W FDKHLL+L E + ++ SD++ V FW+ + +LP NK + + IG ++G F+D+D
Sbjct: 98 WTFDKHLLMLGEMDPNIPPSDIRLTPVQFWVHVCNLPLILMNKEVGQIIGNSVGQFIDMD 157
Query: 68 CNQDGLCWGESMRIKKEQPSVGPWLRFQGATRLPKKLSDSPEDPIF 114
DG+ WG +MRI+K ++ W R KLS S DP++
Sbjct: 158 FEDDGIAWGRTMRIRK---AIDVW----KPLRPGMKLSLSSADPLW 196
BLAST of HG10009771 vs. NCBI nr
Match:
XP_035543571.1 (uncharacterized protein At4g02000-like [Juglans regia])
HSP 1 Score: 81.3 bits (199), Expect = 1.5e-11
Identity = 31/77 (40.26%), Postives = 50/77 (64.94%), Query Frame = 0
Query: 8 WLFDKHLLILEEPNVDLKLSDLKFDKVTFWIRLLDLPFGFQNKTMARRIGEAIGVFLDVD 67
WLFD HL +L++ + +++ S + FD WI++L+LP + NK M IG ++G L+VD
Sbjct: 9 WLFDNHLFVLKDFDGEMQPSKIDFDHACLWIQMLNLPLSYMNKEMGELIGRSLGEVLEVD 68
Query: 68 CNQDGLCWGESMRIKKE 85
+DGL WG +R++ E
Sbjct: 69 VQEDGLAWGRCLRVRVE 85
BLAST of HG10009771 vs. NCBI nr
Match:
XP_021770736.1 (uncharacterized protein LOC110734918 [Chenopodium quinoa])
HSP 1 Score: 81.3 bits (199), Expect = 1.5e-11
Identity = 36/77 (46.75%), Postives = 53/77 (68.83%), Query Frame = 0
Query: 6 RAWLFDKHLLILEEPNVDLKLSDLKFDKVTFWIRLLDLPFGFQNKTMARRIGEAIGVFLD 65
R W FD +L+L+E D + SD++F+ +FWIRL+D+PFG +NK AR +G+ IG L+
Sbjct: 42 RPWAFDNQILLLKETKADEQPSDVEFNSCSFWIRLIDVPFGRRNKQYAREVGDCIGECLE 101
Query: 66 VDCNQDGLCWGESMRIK 83
VD + D L W + MR+K
Sbjct: 102 VD-DFDSLGWEKFMRVK 117
BLAST of HG10009771 vs. NCBI nr
Match:
XP_021738182.1 (uncharacterized protein LOC110704671 [Chenopodium quinoa])
HSP 1 Score: 79.7 bits (195), Expect = 4.3e-11
Identity = 35/77 (45.45%), Postives = 52/77 (67.53%), Query Frame = 0
Query: 6 RAWLFDKHLLILEEPNVDLKLSDLKFDKVTFWIRLLDLPFGFQNKTMARRIGEAIGVFLD 65
R W FDK +L+L+ + D + S++ +K FW+R+LD+PFG +N+ AR +GEA+G FL+
Sbjct: 69 RTWTFDKQILLLKSMDGDEQPSEIVIEKCPFWVRVLDVPFGRRNEAFAREVGEAVGGFLE 128
Query: 66 VDCNQDGLCWGESMRIK 83
D +D W E MRIK
Sbjct: 129 FD-EEDPQGWDEFMRIK 144
BLAST of HG10009771 vs. ExPASy TrEMBL
Match:
A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1)
HSP 1 Score: 97.8 bits (242), Expect = 7.3e-17
Identity = 40/75 (53.33%), Postives = 55/75 (73.33%), Query Frame = 0
Query: 8 WLFDKHLLILEEPNVDLKLSDLKFDKVTFWIRLLDLPFGFQNKTMARRIGEAIGVFLDVD 67
W FDK L++L++P +S+L+F++V FWI L DLP + NKTMA R+G AIG F+DVD
Sbjct: 100 WFFDKALIVLQKPCSSKNISELEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVD 159
Query: 68 CNQDGLCWGESMRIK 83
CN+ G WG S+RI+
Sbjct: 160 CNEKGFSWGASLRIR 174
BLAST of HG10009771 vs. ExPASy TrEMBL
Match:
A0A6P9E8B9 (uncharacterized protein At4g02000-like OS=Juglans regia OX=51240 GN=LOC118347663 PE=4 SV=1)
HSP 1 Score: 81.3 bits (199), Expect = 7.1e-12
Identity = 31/77 (40.26%), Postives = 50/77 (64.94%), Query Frame = 0
Query: 8 WLFDKHLLILEEPNVDLKLSDLKFDKVTFWIRLLDLPFGFQNKTMARRIGEAIGVFLDVD 67
WLFD HL +L++ + +++ S + FD WI++L+LP + NK M IG ++G L+VD
Sbjct: 9 WLFDNHLFVLKDFDGEMQPSKIDFDHACLWIQMLNLPLSYMNKEMGELIGRSLGEVLEVD 68
Query: 68 CNQDGLCWGESMRIKKE 85
+DGL WG +R++ E
Sbjct: 69 VQEDGLAWGRCLRVRVE 85
BLAST of HG10009771 vs. ExPASy TrEMBL
Match:
A0A803MW53 (Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1)
HSP 1 Score: 80.5 bits (197), Expect = 1.2e-11
Identity = 36/77 (46.75%), Postives = 49/77 (63.64%), Query Frame = 0
Query: 6 RAWLFDKHLLILEEPNVDLKLSDLKFDKVTFWIRLLDLPFGFQNKTMARRIGEAIGVFLD 65
R W+FD +L+L+E + S++ FD FWIRLLD+PFG ++ +A IG IG +D
Sbjct: 98 RPWVFDNQILLLKEMCATEQPSEVSFDACPFWIRLLDVPFGMRSSRVAHEIGNCIGECID 157
Query: 66 VDCNQDGLCWGESMRIK 83
VD D LCW E MR+K
Sbjct: 158 VD-ESDPLCWDEFMRVK 173
BLAST of HG10009771 vs. ExPASy TrEMBL
Match:
A0A803MN93 (Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1)
HSP 1 Score: 79.7 bits (195), Expect = 2.1e-11
Identity = 35/77 (45.45%), Postives = 52/77 (67.53%), Query Frame = 0
Query: 6 RAWLFDKHLLILEEPNVDLKLSDLKFDKVTFWIRLLDLPFGFQNKTMARRIGEAIGVFLD 65
R W FDK +L+L+ + D + S++ +K FW+R+LD+PFG +N+ AR +GEA+G FL+
Sbjct: 151 RTWTFDKQILLLKSMDGDEQPSEIVIEKCPFWVRVLDVPFGRRNEAFAREVGEAVGGFLE 210
Query: 66 VDCNQDGLCWGESMRIK 83
D +D W E MRIK
Sbjct: 211 FD-EEDPQGWDEFMRIK 226
BLAST of HG10009771 vs. ExPASy TrEMBL
Match:
A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1)
HSP 1 Score: 79.0 bits (193), Expect = 3.5e-11
Identity = 34/82 (41.46%), Postives = 48/82 (58.54%), Query Frame = 0
Query: 1 MGPQRRAWLFDKHLLILEEPNVDLKLSDLKFDKVTFWIRLLDLPFGFQNKTMARRIGEAI 60
MGP W FD+ L+I++ P K D+ F V+ W+ DL NKTMA R+G AI
Sbjct: 98 MGP----WTFDRALIIIDNPVSLTKPLDMDFRNVSLWVHFFDLSLACMNKTMATRLGNAI 157
Query: 61 GVFLDVDCNQDGLCWGESMRIK 83
G+F DV+ N + CWG +R++
Sbjct: 158 GLFEDVESNANNFCWGSCLRVR 175
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022156185.1 | 1.5e-16 | 53.33 | uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncha... | [more] |
XP_028063997.1 | 3.8e-12 | 37.74 | uncharacterized protein LOC114267184 [Camellia sinensis] | [more] |
XP_035543571.1 | 1.5e-11 | 40.26 | uncharacterized protein At4g02000-like [Juglans regia] | [more] |
XP_021770736.1 | 1.5e-11 | 46.75 | uncharacterized protein LOC110734918 [Chenopodium quinoa] | [more] |
XP_021738182.1 | 4.3e-11 | 45.45 | uncharacterized protein LOC110704671 [Chenopodium quinoa] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DU55 | 7.3e-17 | 53.33 | uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A6P9E8B9 | 7.1e-12 | 40.26 | uncharacterized protein At4g02000-like OS=Juglans regia OX=51240 GN=LOC118347663... | [more] |
A0A803MW53 | 1.2e-11 | 46.75 | Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | [more] |
A0A803MN93 | 2.1e-11 | 45.45 | Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | [more] |
A0A6J1BSZ1 | 3.5e-11 | 41.46 | uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005... | [more] |
Match Name | E-value | Identity | Description | |