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HG10009771.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTCCTCAGCGCAGGGCATGGCTTTTTGACAAACATTTGCTAATCCTGGAAGAACCGAATGTTGACTTGAAGCTTTCAGATTTGAAATTCGACAAAGTAACATTCTGGATCCGCTTGTTGGATCTTCCCTTTGGTTTCCAGAATAAAACAATGGCAAGGAGGATTGGGGAAGCAATTGGTGTTTTTCTTGATGTGGACTGCAATCAAGATGGTTTGTGTTGGGGAGAGTCTATGAGAATCAAAGTTCAATTTGATATTTCTAAGCCACTCTGAAGTGGTATCAAGGTTCAAACTGCGGATGGAAAAGGAGAAAGATAGGTGTCAATTCGTTATGAAAGACTGCTTGATTTTTGTTACCTTTGTGGTTGTATTGACCATGTTGCCAAAGATTGTAATTCAGATTTATCTATTCTTGATGGAAAAAGAAGGAGCAACCCTCAGTTGGTCCTTGGCTAAGGTTTCAAGGGGCTACAAGATTACCAAAGAAATTATCCGACTCTCCTGAAGACCCCATCTTCCAGAATGATCTCCACTCCTCTCATCCTTCTAACCCAATTACTCCCCTTGTTGTTGAACAAGCTCCCTCAAACTCACCTGTAGTTAACCCTCCAAGTCCTCTTGTGATTGATCTAAATAAAACTCAAGTGTCTGAGATTCAGTGTGAGAATAGATCTTTATTTGATGCCCCCTTGGTCCCTTCGCTCTCCTCCACTTTATTAAACTCTGTTCACCCTTCCTTGGGTTCTTTTCATCAAGATTCTAACTGCTTCACCTTTCAAATGTCTGATACCTCCCTGGAAAAACCTGTTCAAGATGAACGTATTTATATTATTCTGCCTTGTAAAACCACTAAATCGAGGAAGAAAAAAAAACAAGTTCAATTTTTGGTTCTCCAACTCGTTACGTCTGCTTGGGTCAAGTTGGAAAAAAAACATCCTTGTGATGATGTACTAGATGTTCTCAGAAGAAAGAAATTGTGGGCCTCCTCTCTAGAACAATGA ATGGGTCCTCAGCGCAGGGCATGGCTTTTTGACAAACATTTGCTAATCCTGGAAGAACCGAATGTTGACTTGAAGCTTTCAGATTTGAAATTCGACAAAGTAACATTCTGGATCCGCTTGTTGGATCTTCCCTTTGGTTTCCAGAATAAAACAATGGCAAGGAGGATTGGGGAAGCAATTGGTGTTTTTCTTGATGTGGACTGCAATCAAGATGGTTTGTGTTGGGGAGAGTCTATGAGAATCAAAAAGGAGCAACCCTCAGTTGGTCCTTGGCTAAGGTTTCAAGGGGCTACAAGATTACCAAAGAAATTATCCGACTCTCCTGAAGACCCCATCTTCCAGAATGATCTCCACTCCTCTCATCCTTCTAACCCAATTACTCCCCTTGTTGTTGAACAAGCTCCCTCAAACTCACCTGTAGTTAACCCTCCAAGTCCTCTTGTGATTGATCTAAATAAAACTCAAGTGTCTGAGATTCAGTGTGAGAATAGATCTTTATTTGATGCCCCCTTGGTCCCTTCGCTCTCCTCCACTTTATTAAACTCTGTTCACCCTTCCTTGGGTTCTTTTCATCAAGATTCTAACTGCTTCACCTTTCAAATGTCTGATACCTCCCTGGAAAAACCTGTTCAAGATGAACGTATTTATATTATTCTGCCTTGTAAAACCACTAAATCGAGGAAGAAAAAAAAACAAGTTCAATTTTTGGTTCTCCAACTCGTTACGTCTGCTTGGGTCAAGTTGGAAAAAAAACATCCTTGTGATGATGTACTAGATGTTCTCAGAAGAAAGAAATTGTGGGCCTCCTCTCTAGAACAATGA ATGGGTCCTCAGCGCAGGGCATGGCTTTTTGACAAACATTTGCTAATCCTGGAAGAACCGAATGTTGACTTGAAGCTTTCAGATTTGAAATTCGACAAAGTAACATTCTGGATCCGCTTGTTGGATCTTCCCTTTGGTTTCCAGAATAAAACAATGGCAAGGAGGATTGGGGAAGCAATTGGTGTTTTTCTTGATGTGGACTGCAATCAAGATGGTTTGTGTTGGGGAGAGTCTATGAGAATCAAAAAGGAGCAACCCTCAGTTGGTCCTTGGCTAAGGTTTCAAGGGGCTACAAGATTACCAAAGAAATTATCCGACTCTCCTGAAGACCCCATCTTCCAGAATGATCTCCACTCCTCTCATCCTTCTAACCCAATTACTCCCCTTGTTGTTGAACAAGCTCCCTCAAACTCACCTGTAGTTAACCCTCCAAGTCCTCTTGTGATTGATCTAAATAAAACTCAAGTGTCTGAGATTCAGTGTGAGAATAGATCTTTATTTGATGCCCCCTTGGTCCCTTCGCTCTCCTCCACTTTATTAAACTCTGTTCACCCTTCCTTGGGTTCTTTTCATCAAGATTCTAACTGCTTCACCTTTCAAATGTCTGATACCTCCCTGGAAAAACCTGTTCAAGATGAACGTATTTATATTATTCTGCCTTGTAAAACCACTAAATCGAGGAAGAAAAAAAAACAAGTTCAATTTTTGGTTCTCCAACTCGTTACGTCTGCTTGGGTCAAGTTGGAAAAAAAACATCCTTGTGATGATGTACTAGATGTTCTCAGAAGAAAGAAATTGTGGGCCTCCTCTCTAGAACAATGA MGPQRRAWLFDKHLLILEEPNVDLKLSDLKFDKVTFWIRLLDLPFGFQNKTMARRIGEAIGVFLDVDCNQDGLCWGESMRIKKEQPSVGPWLRFQGATRLPKKLSDSPEDPIFQNDLHSSHPSNPITPLVVEQAPSNSPVVNPPSPLVIDLNKTQVSEIQCENRSLFDAPLVPSLSSTLLNSVHPSLGSFHQDSNCFTFQMSDTSLEKPVQDERIYIILPCKTTKSRKKKKQVQFLVLQLVTSAWVKLEKKHPCDDVLDVLRRKKLWASSLEQ Homology
BLAST of HG10009771.1 vs. NCBI nr
Match: XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia]) HSP 1 Score: 97.8 bits (242), Expect = 1.5e-16 Identity = 40/75 (53.33%), Postives = 55/75 (73.33%), Query Frame = 0
BLAST of HG10009771.1 vs. NCBI nr
Match: XP_028063997.1 (uncharacterized protein LOC114267184 [Camellia sinensis]) HSP 1 Score: 83.2 bits (204), Expect = 3.8e-12 Identity = 40/106 (37.74%), Postives = 62/106 (58.49%), Query Frame = 0
BLAST of HG10009771.1 vs. NCBI nr
Match: XP_035543571.1 (uncharacterized protein At4g02000-like [Juglans regia]) HSP 1 Score: 81.3 bits (199), Expect = 1.5e-11 Identity = 31/77 (40.26%), Postives = 50/77 (64.94%), Query Frame = 0
BLAST of HG10009771.1 vs. NCBI nr
Match: XP_021770736.1 (uncharacterized protein LOC110734918 [Chenopodium quinoa]) HSP 1 Score: 81.3 bits (199), Expect = 1.5e-11 Identity = 36/77 (46.75%), Postives = 53/77 (68.83%), Query Frame = 0
BLAST of HG10009771.1 vs. NCBI nr
Match: XP_021738182.1 (uncharacterized protein LOC110704671 [Chenopodium quinoa]) HSP 1 Score: 79.7 bits (195), Expect = 4.3e-11 Identity = 35/77 (45.45%), Postives = 52/77 (67.53%), Query Frame = 0
BLAST of HG10009771.1 vs. ExPASy TrEMBL
Match: A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 7.3e-17 Identity = 40/75 (53.33%), Postives = 55/75 (73.33%), Query Frame = 0
BLAST of HG10009771.1 vs. ExPASy TrEMBL
Match: A0A6P9E8B9 (uncharacterized protein At4g02000-like OS=Juglans regia OX=51240 GN=LOC118347663 PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 7.1e-12 Identity = 31/77 (40.26%), Postives = 50/77 (64.94%), Query Frame = 0
BLAST of HG10009771.1 vs. ExPASy TrEMBL
Match: A0A803MW53 (Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 1.2e-11 Identity = 36/77 (46.75%), Postives = 49/77 (63.64%), Query Frame = 0
BLAST of HG10009771.1 vs. ExPASy TrEMBL
Match: A0A803MN93 (Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 2.1e-11 Identity = 35/77 (45.45%), Postives = 52/77 (67.53%), Query Frame = 0
BLAST of HG10009771.1 vs. ExPASy TrEMBL
Match: A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 3.5e-11 Identity = 34/82 (41.46%), Postives = 48/82 (58.54%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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