Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGGTCAAGTCACTGAACACATTTACAATGAAGTTCGCACTAGTAATTCTTGTTTGCATAATCATTTTAGCACCATCGACAACAGCCCGCACGGTGGCGGCAACACCGGGTCTATCAGTACAACAAAATCTCTCTTTCTTAAGTTGTGCCCCATTTATTTTGGATGCTGCATTGTGTGTGGTCGATGTGATCAAGTTTCCAATTGCTCCTCATCCTTTTTGTTGCAAAGCCATTTTTAAGCTAGATGATTGTGCTCCCGAAATTTTCGAAAAGATTCCTCTTACTGACATGGATATAATTAAGAAGATTTGTGCTTTGTAA
mRNA sequence
ATGACGGTCAAGTCACTGAACACATTTACAATGAAGTTCGCACTAGTAATTCTTGTTTGCATAATCATTTTAGCACCATCGACAACAGCCCGCACGGTGGCGGCAACACCGGGTCTATCAGTACAACAAAATCTCTCTTTCTTAAGTTGTGCCCCATTTATTTTGGATGCTGCATTGTGTGTGGTCGATGTGATCAAGTTTCCAATTGCTCCTCATCCTTTTTGTTGCAAAGCCATTTTTAAGCTAGATGATTGTGCTCCCGAAATTTTCGAAAAGATTCCTCTTACTGACATGGATATAATTAAGAAGATTTGTGCTTTGTAA
Coding sequence (CDS)
ATGACGGTCAAGTCACTGAACACATTTACAATGAAGTTCGCACTAGTAATTCTTGTTTGCATAATCATTTTAGCACCATCGACAACAGCCCGCACGGTGGCGGCAACACCGGGTCTATCAGTACAACAAAATCTCTCTTTCTTAAGTTGTGCCCCATTTATTTTGGATGCTGCATTGTGTGTGGTCGATGTGATCAAGTTTCCAATTGCTCCTCATCCTTTTTGTTGCAAAGCCATTTTTAAGCTAGATGATTGTGCTCCCGAAATTTTCGAAAAGATTCCTCTTACTGACATGGATATAATTAAGAAGATTTGTGCTTTGTAA
Protein sequence
MTVKSLNTFTMKFALVILVCIIILAPSTTARTVAATPGLSVQQNLSFLSCAPFILDAALCVVDVIKFPIAPHPFCCKAIFKLDDCAPEIFEKIPLTDMDIIKKICAL
Homology
BLAST of HG10008105 vs. NCBI nr
Match:
KAA0050069.1 (hypothetical protein E6C27_scaffold675G00500 [Cucumis melo var. makuwa] >TYK10341.1 hypothetical protein E5676_scaffold367G00160 [Cucumis melo var. makuwa])
HSP 1 Score: 144.8 bits (364), Expect = 4.2e-31
Identity = 76/108 (70.37%), Postives = 83/108 (76.85%), Query Frame = 0
Query: 1 MTVKSLNTFTMKFALVILVCIIILAPSTT-ARTVAATPGLSVQQNLSFLSCAPFILDAAL 60
M +SLN MK LV LVCI ILAPSTT A T AA P SV QN FL CAPFIL+A L
Sbjct: 1 MAAQSLNVSAMKLVLVFLVCIAILAPSTTMADTTAAAPSPSVPQNFPFLKCAPFILEATL 60
Query: 61 CVVDVIKFPIAPHPFCCKAIFKLDDCAPEIFEKIPLTDMDIIKKICAL 108
CV DVIKFPIAPHP CCKAI KL+DCAPEI++KIP DMD+IKKIC+L
Sbjct: 61 CVTDVIKFPIAPHPSCCKAISKLNDCAPEIYQKIPSPDMDVIKKICSL 108
BLAST of HG10008105 vs. NCBI nr
Match:
KAE8653023.1 (hypothetical protein Csa_023561, partial [Cucumis sativus])
HSP 1 Score: 131.7 bits (330), Expect = 3.7e-27
Identity = 70/107 (65.42%), Postives = 81/107 (75.70%), Query Frame = 0
Query: 4 KSLNTFTMKFALVILVCIIILAPSTTA-RTVAATPGL--SVQQNLSFLSCAPFILDAALC 63
KSL MK ALV +V I ILA S TA RTV ++ L S+ Q+LSF SC PFILDA LC
Sbjct: 1 KSLKASPMKLALVFIVSIAILAASATAGRTVVSSTTLDPSISQDLSFFSCTPFILDATLC 60
Query: 64 VVDVIKFPIAPHPFCCKAIFKLDDCAPEIFEKIPLTDMDIIKKICAL 108
+VDV KFPIAPHPFCCKAIFKL+DCAP +F+ IP DMD++K ICAL
Sbjct: 61 LVDVFKFPIAPHPFCCKAIFKLNDCAPVVFQTIPSADMDVVKNICAL 107
BLAST of HG10008105 vs. NCBI nr
Match:
TYK10334.1 (hypothetical protein E5676_scaffold367G00080 [Cucumis melo var. makuwa])
HSP 1 Score: 131.3 bits (329), Expect = 4.8e-27
Identity = 68/98 (69.39%), Postives = 76/98 (77.55%), Query Frame = 0
Query: 11 MKFALVILVCIIILAPSTT-ARTVAATPGLSVQQNLSFLSCAPFILDAALCVVDVIKFPI 70
MK LV LVCI ILAPSTT A T AA P SV QN FL CAPFIL+A LCV VIKFPI
Sbjct: 1 MKLVLVFLVCIAILAPSTTMAGTTAAAPSPSVPQNFPFLKCAPFILEATLCVTGVIKFPI 60
Query: 71 APHPFCCKAIFKLDDCAPEIFEKIPLTDMDIIKKICAL 108
APHP CCKAI KL DCAP+I++KIP +DM++IKK C+L
Sbjct: 61 APHPSCCKAISKLKDCAPDIYQKIPSSDMNVIKKTCSL 98
BLAST of HG10008105 vs. NCBI nr
Match:
KAA0050072.1 (hypothetical protein E6C27_scaffold675G00540 [Cucumis melo var. makuwa] >TYK10333.1 hypothetical protein E5676_scaffold367G00060 [Cucumis melo var. makuwa])
HSP 1 Score: 126.3 bits (316), Expect = 1.6e-25
Identity = 69/108 (63.89%), Postives = 80/108 (74.07%), Query Frame = 0
Query: 1 MTVKSLNTFTMKFALVILVCIIILAPSTTA-RTVAATP-GLSVQQNLSFLSCAPFILDAA 60
M VKSL +K A V +V I ILA S TA RTV++T S+ QNLSF SCAPFI D
Sbjct: 1 MAVKSLKASPIKSASVFIVSIAILAASVTAGRTVSSTTLDPSMSQNLSFFSCAPFIFDVT 60
Query: 61 LCVVDVIKFPIAPHPFCCKAIFKLDDCAPEIFEKIPLTDMDIIKKICA 107
LC+VDV KFPI+PHP CCKAIFKL+DCAP +F+ IP DMD+IKKICA
Sbjct: 61 LCLVDVFKFPISPHPLCCKAIFKLNDCAPVVFQTIPPADMDVIKKICA 108
BLAST of HG10008105 vs. NCBI nr
Match:
KAE8653020.1 (hypothetical protein Csa_004576, partial [Cucumis sativus] >KGN65427.2 hypothetical protein Csa_004566, partial [Cucumis sativus])
HSP 1 Score: 123.2 bits (308), Expect = 1.3e-24
Identity = 67/103 (65.05%), Postives = 77/103 (74.76%), Query Frame = 0
Query: 1 MTVKSLNTFTMKFALVILVCIIILAPSTTA-RTVAATPGL--SVQQNLSFLSCAPFILDA 60
M VKSL MK ALV +V I ILA S TA RTV ++ L S+ Q+LSF SC PFILDA
Sbjct: 1 MAVKSLKASPMKLALVFIVSIAILAASATAGRTVVSSTTLDPSISQDLSFFSCTPFILDA 60
Query: 61 ALCVVDVIKFPIAPHPFCCKAIFKLDDCAPEIFEKIPLTDMDI 101
LC+VDV KFPIAPHPFCCKAIFKL+DCAP +F+ IP DMD+
Sbjct: 61 TLCLVDVFKFPIAPHPFCCKAIFKLNDCAPVVFQTIPSADMDV 103
BLAST of HG10008105 vs. ExPASy TrEMBL
Match:
A0A5A7U9A1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00160 PE=4 SV=1)
HSP 1 Score: 144.8 bits (364), Expect = 2.0e-31
Identity = 76/108 (70.37%), Postives = 83/108 (76.85%), Query Frame = 0
Query: 1 MTVKSLNTFTMKFALVILVCIIILAPSTT-ARTVAATPGLSVQQNLSFLSCAPFILDAAL 60
M +SLN MK LV LVCI ILAPSTT A T AA P SV QN FL CAPFIL+A L
Sbjct: 1 MAAQSLNVSAMKLVLVFLVCIAILAPSTTMADTTAAAPSPSVPQNFPFLKCAPFILEATL 60
Query: 61 CVVDVIKFPIAPHPFCCKAIFKLDDCAPEIFEKIPLTDMDIIKKICAL 108
CV DVIKFPIAPHP CCKAI KL+DCAPEI++KIP DMD+IKKIC+L
Sbjct: 61 CVTDVIKFPIAPHPSCCKAISKLNDCAPEIYQKIPSPDMDVIKKICSL 108
BLAST of HG10008105 vs. ExPASy TrEMBL
Match:
A0A5D3CGK9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00080 PE=4 SV=1)
HSP 1 Score: 131.3 bits (329), Expect = 2.3e-27
Identity = 68/98 (69.39%), Postives = 76/98 (77.55%), Query Frame = 0
Query: 11 MKFALVILVCIIILAPSTT-ARTVAATPGLSVQQNLSFLSCAPFILDAALCVVDVIKFPI 70
MK LV LVCI ILAPSTT A T AA P SV QN FL CAPFIL+A LCV VIKFPI
Sbjct: 1 MKLVLVFLVCIAILAPSTTMAGTTAAAPSPSVPQNFPFLKCAPFILEATLCVTGVIKFPI 60
Query: 71 APHPFCCKAIFKLDDCAPEIFEKIPLTDMDIIKKICAL 108
APHP CCKAI KL DCAP+I++KIP +DM++IKK C+L
Sbjct: 61 APHPSCCKAISKLKDCAPDIYQKIPSSDMNVIKKTCSL 98
BLAST of HG10008105 vs. ExPASy TrEMBL
Match:
A0A5A7U2L3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00060 PE=4 SV=1)
HSP 1 Score: 126.3 bits (316), Expect = 7.5e-26
Identity = 69/108 (63.89%), Postives = 80/108 (74.07%), Query Frame = 0
Query: 1 MTVKSLNTFTMKFALVILVCIIILAPSTTA-RTVAATP-GLSVQQNLSFLSCAPFILDAA 60
M VKSL +K A V +V I ILA S TA RTV++T S+ QNLSF SCAPFI D
Sbjct: 1 MAVKSLKASPIKSASVFIVSIAILAASVTAGRTVSSTTLDPSMSQNLSFFSCAPFIFDVT 60
Query: 61 LCVVDVIKFPIAPHPFCCKAIFKLDDCAPEIFEKIPLTDMDIIKKICA 107
LC+VDV KFPI+PHP CCKAIFKL+DCAP +F+ IP DMD+IKKICA
Sbjct: 61 LCLVDVFKFPISPHPLCCKAIFKLNDCAPVVFQTIPPADMDVIKKICA 108
BLAST of HG10008105 vs. ExPASy TrEMBL
Match:
A0A5A7U475 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00490 PE=4 SV=1)
HSP 1 Score: 121.7 bits (304), Expect = 1.9e-24
Identity = 61/104 (58.65%), Postives = 78/104 (75.00%), Query Frame = 0
Query: 4 KSLNTFTMKFALVILVCIIILAPSTTARTVAATPGLSVQQNLSFLSCAPFILDAALCVVD 63
+ ++TF MK +L LV + ILAPS TA TVAA P ++LSF +C PFILDA +CVV
Sbjct: 5 RGMSTFIMKISLTFLVGMAILAPSATATTVAAAPSPLALEDLSFSNCTPFILDATMCVVS 64
Query: 64 VIKFPIAPHPFCCKAIFKLDDCAPEIFEKIPLTDMDIIKKICAL 108
VIKFP+APHP CCKAI L+DC+PE+++ IP MD+IKKIC+L
Sbjct: 65 VIKFPVAPHPSCCKAISDLNDCSPEVYQHIP--GMDVIKKICSL 106
BLAST of HG10008105 vs. ExPASy TrEMBL
Match:
A0A5D3CGL7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00200 PE=4 SV=1)
HSP 1 Score: 121.3 bits (303), Expect = 2.4e-24
Identity = 63/107 (58.88%), Postives = 80/107 (74.77%), Query Frame = 0
Query: 4 KSLNTFTMKFALVILVCIIILAPSTTARTVAATPG---LSVQQNLSFLSCAPFILDAALC 63
KS + T++ ALV LVCI+ILAPS TA T+A P + + Q+ SF +CAPFIL+A +C
Sbjct: 5 KSTSASTIRLALVFLVCIVILAPSVTAHTMAEAPSPLLVLLDQDSSFSNCAPFILEATMC 64
Query: 64 VVDVIKFPIAPHPFCCKAIFKLDDCAPEIFEKIPLTDMDIIKKICAL 108
+VDVIK P+APHP CCKAI L+DCAPEI++ IP MD+IKKIC L
Sbjct: 65 MVDVIKLPVAPHPSCCKAISDLNDCAPEIYQHIP--GMDVIKKICGL 109
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAA0050069.1 | 4.2e-31 | 70.37 | hypothetical protein E6C27_scaffold675G00500 [Cucumis melo var. makuwa] >TYK1034... | [more] |
| KAE8653023.1 | 3.7e-27 | 65.42 | hypothetical protein Csa_023561, partial [Cucumis sativus] | [more] |
| TYK10334.1 | 4.8e-27 | 69.39 | hypothetical protein E5676_scaffold367G00080 [Cucumis melo var. makuwa] | [more] |
| KAA0050072.1 | 1.6e-25 | 63.89 | hypothetical protein E6C27_scaffold675G00540 [Cucumis melo var. makuwa] >TYK1033... | [more] |
| KAE8653020.1 | 1.3e-24 | 65.05 | hypothetical protein Csa_004576, partial [Cucumis sativus] >KGN65427.2 hypotheti... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7U9A1 | 2.0e-31 | 70.37 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5D3CGK9 | 2.3e-27 | 69.39 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5A7U2L3 | 7.5e-26 | 63.89 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5A7U475 | 1.9e-24 | 58.65 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| A0A5D3CGL7 | 2.4e-24 | 58.88 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
