Cucsat.G8884 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G8884
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	APO protein 1, chloroplastic
Location	ctg1635: 1276299 .. 1279817 (-)
RNA-Seq Expression	Cucsat.G8884
Synteny	Cucsat.G8884

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGATGAATGTAGTTTTACTGGCTCACACTTTCGGTTCTTTTCACCCTCCTTTTGTTATAATACATTTGAAAAAAATAATTAAAAAAAAGCGTCCATTTAAAAATTTTCGCAGCCTCCACATTTCTCAGATTATTTTTCGCTCCACCTCTGCTCCGGCGGTAACAACCACTCCTTCTTCAACTTCATAGTTTATCTTCTTCAAATTTCTCTAATTGAAGCACTTAAATCTTTGATTTGTTCGAAATTATTGTTATATAATACCTTAGCTCTCAATTTCTCCATCGTTTTTGTTTCTGGTAATTTGAAGTTTGCTATACATCGTCGTTGTAGTTGTAACTACCATGCTTCCTGTTTTTTCGGTTCTGTTGGGACTGATATATGTTTGGTTTCTTTTTCAAGGCAACAAGGCAGCTAGAGAATCGGTGACTTGATGCTCCAGATACTTCCGGCGGTTTCTACTTGTTCTTGGGACCCATCTCAAATGGGTAGGTTTGTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTTATTTTTTGTATTGATACCTAAATTTGTAATCTCTGGGAGGAATTGAAAGGACGAGGACAATAGATGATAACTCACCATTCATATCGGTGTGGTGCTTGGTCACCATCACTCATTGGATTGGATCAAGTCAGCATTCGTTTAGAGAGCTAAAGAGTAGAGCATACCTCAAATATCGTTACCTCTCATGATTGTCTAGAAATAGGTTTTGTAACTGTCATTTGCTCATTAACTTTCCGAGTCATTAAGGAGGGTCGGTCTCCCTACACTAAGTGAAATTTACTTATGGCTACATGAACAACCCTATAGGTAGGTTTCTATATTTTGACAGATTAACTTATGACTTCATGGCTGACTCCATAGGTTGATCTCTTCCAAATTAAGCTCTTCTATTGGAATGATCCATTGGGAATTTGGTCGTCCGAGCTAACTATTTAGTCATACTTCTTACCCACAGCATTTTGAATTATAGAAAGAGTGTCCTTCATTGCTCCATTGTTGTTCACTAATTGGAGGCGTTGTTCATCCATAACTGCGTAGTAGCTACTGCCATTTGATTCCAATTGAAGTCTGAAAGATGTTTTGTTGTTGAACAATGGCTTGAGCTTATATCGGACTGATTTTATTGAATGTTTTAGGTATCCTCATTGGTAATGTGGAGTTTACAAGCCGGCACCTTTCTGCACTTGGATCATATACTCTTCGACCGAAGGTTCAAATGCTTATCCAAATCATCTCTACGAAATTTCAGTACTCTCTTGCTTGATTTTCTCTTGATTCTAGTGATCCTGTTGATGAAATGACATGCCTGGCTATGGATTTTGGATCATTTACCAAGACATGTTTATATTACCAGATCATATCTTGGTTTGTAATCCTACTTCGAAATCATTACCCTTCCAAATGGTTAAAACATGAATACTCTCAGTTTAAGTAAAATGATGTTTCTGTTACATCTTGTATTTGTATCTCAGATTTTGAGGGCATCCTTCTATGCGAGTCACTATCTCACTTTATTCTTGAAGATAATTACTATTGATTTTTAATGGTTCTCCTACTTCCTATGAGAAACTCTGAGAGAAATAAGATCTTGCAATATTCTTCTATTGCAGTTTGCGCATAAACTGTTGTCTCAAAAAGTGCCAACAGCATTAAGGACTTTATCCTATACCAGTCAGGAATATGGAAAAGAACCTGTTTCGAAGAAACAAGACATGTATCGCCAGAATGTGGATCTTCCAGCCATATTGCCTAAAAAGAAAAAGAAACCTTATCCTATTCCCATAAAGCAAATAAAGCGGGCTGCGAGAGCTGACAAAGAGCTTGCACAAAGGGGTATAGAGAAACCACTTGAACCTGGGAAAAATGGTTTACTTGTACCTGATTTGATACCTGTTGCTCATCAAGTAATGGATGCTTGGAAAATTTTGATTAAGGGCCTTTCACATCTTTTACATGTTATTCCAGTATATGCTTGCAGGTTGTTCTTTTCTGGTCAAGAAGTTTTAATATGAAATATTTTTAGCGAGCTCGTTTGGCTCTGTCCTTCTAGTCTTTCAGCATGCTAAATTTAAAATCCATAGTTATGCTGAATAGCAAATGTCTTTTGATTCTGTGTAGGGAATGTTCAGAAGTTCATGTAGCCCATTCAGGCCACCATATTCAAGATTGTCTTGGTGCTACCAGTGCAACGCGTCGAAGCTTCCACTCATGGGTCACAGGTTCTATTAATGATGTCTTAGTCCCTATTGAGTCATACCATCTTTATGATCCTTTTGGCCGGCGCATTAAGCATGAAACACGATTCGAATATGATAGAATTCCAGCTGTTGTAGAGCTCTGCATCCAGGCCGGTGTGGATATACCGGAGTATCCTTCACGTAGAAGAACTAAACCCATCCAAATGATTGGAAAGAAGGTAATTGATCGAGGTGGAAATATGGAGGAGCCTAAACCTTGGAAATCTTGTGATTCTTACCCTCTTCTTGATTTCGATACACAAGGGGCTCCTCAACGATTTGCACCTCCTCTACCTGAAGATGTCCCTAGAATTGCTCAAGAAACAATCGCAGCATATGAAACTGTTAGGTATGGTGTAAGGATGTTGATGAAGAAGTATACAGTGAAGGCTTGTGGGTACTGCCCTGAGGTTCATGTAGGACCATGGGGTCATAATGCTAAACTATGTGGAGAATTTAAGCACCAGTGGAGGGATGGAAAGCATGGTTGGCAGGATGCAACTTTAGACGAAGTACTGCCTCGCAATTATGTTTGGCATGTCCGTGATCCAAAAGGTCCGCCATTGATTGGTACATTGAAGAGGTTTTATGGTAAAGCTCCTGCTGTAGTTGAAGTGTGTATTCAGGCAGGCGCAACGATCCCCAAGAAATACTTGCCAATGATGAGGCTAGACATAGTCCTTCCTGATAGCGAGGAGGCGCGATCTGTTGCATAATTGCGTTGGCCAAAGTCATGGCGATTTCATCTGCACAGGTCTGTCCCAAGACCTCTATTCTTATCTTCGAGTTTCTGAAGAGATAAATTTTAAACATCAACAGTTGATGGAACTACAGCTTAGATGCTACATTAAGAGCAGTTAGAAAAGTGAGGATATCAGATGTATATTAAGGTTTGACTAGATTTCCTTGTTACAGTGTCTTCCTTGATCCCCTTGTTTGTATAGTTAAGATTTCCTGACCTTCAACCATTTGAATACTTGATAGATGCCGCTTTAACTTGTTGATTGACTTCGAGATCTATAATTGTGAAATTCAGAATGAAAATATGAAGTAGAAGGAGCCTCTTACAGTTATGTTGTATGTTGTGACGAGTCTTGAAATTGGAAATTTGTAATGTCAGCAAAGGATATTGACAAGTAAAAAAATCAGTAGCTCAAGTTTATTTTTTGTATGAACTTCTTTTTGCCTTTCTGTTTGTCATCATATCAAAGATGTTCCTGTGGCTGTGGCTTCCTTTTAAACGAAGAATTTCTCTTACCAAATTCAATTTAAAGCTACCTTCAACGACAAAGTTAGGATTGAAACGTTACCTTGGCAACTTAATGGAAAAATGAGAGGCATTGAAGGACTTTGAAGACAAGACGAGAAGATGCCAAGTTCTTGTGTTCAGAAGAAGGTCCCTTTTAGTACGAATATTCGATCGATCATTAATATTTCAGCTGTATTAATTTTCTGTAATCTGTTTAGGTTGACATGATTTCCATCACTTTTTTTTTTTTCTTTTTCTCATCAATAAAAGTTTATTTTCT

Coding sequence (CDS)

ATGCTCCAGATACTTCCGGCGGTTTCTACTTGTTCTTGGGACCCATCTCAAATGGGTATCCTCATTGGTAATGTGGAGTTTACAAGCCGGCACCTTTCTGCACTTGGATCATATACTCTTCGACCGAAGTTTGCGCATAAACTGTTGTCTCAAAAAGTGCCAACAGCATTAAGGACTTTATCCTATACCAGTCAGGAATATGGAAAAGAACCTGTTTCGAAGAAACAAGACATGTATCGCCAGAATGTGGATCTTCCAGCCATATTGCCTAAAAAGAAAAAGAAACCTTATCCTATTCCCATAAAGCAAATAAAGCGGGCTGCGAGAGCTGACAAAGAGCTTGCACAAAGGGGTATAGAGAAACCACTTGAACCTGGGAAAAATGGTTTACTTGTACCTGATTTGATACCTGTTGCTCATCAAGTAATGGATGCTTGGAAAATTTTGATTAAGGGCCTTTCACATCTTTTACATGTTATTCCAGTATATGCTTGCAGGGAATGTTCAGAAGTTCATGTAGCCCATTCAGGCCACCATATTCAAGATTGTCTTGGTGCTACCAGTGCAACGCGTCGAAGCTTCCACTCATGGGTCACAGGTTCTATTAATGATGTCTTAGTCCCTATTGAGTCATACCATCTTTATGATCCTTTTGGCCGGCGCATTAAGCATGAAACACGATTCGAATATGATAGAATTCCAGCTGTTGTAGAGCTCTGCATCCAGGCCGGTGTGGATATACCGGAGTATCCTTCACGTAGAAGAACTAAACCCATCCAAATGATTGGAAAGAAGGTAATTGATCGAGGTGGAAATATGGAGGAGCCTAAACCTTGGAAATCTTGTGATTCTTACCCTCTTCTTGATTTCGATACACAAGGGGCTCCTCAACGATTTGCACCTCCTCTACCTGAAGATGTCCCTAGAATTGCTCAAGAAACAATCGCAGCATATGAAACTGTTAGGTATGGTGTAAGGATGTTGATGAAGAAGTATACAGTGAAGGCTTGTGGGTACTGCCCTGAGGTTCATGTAGGACCATGGGGTCATAATGCTAAACTATGTGGAGAATTTAAGCACCAGTGGAGGGATGGAAAGCATGGTTGGCAGGATGCAACTTTAGACGAAGTACTGCCTCGCAATTATGTTTGGCATGTCCGTGATCCAAAAGGTCCGCCATTGATTGGTACATTGAAGAGGTTTTATGGTAAAGCTCCTGCTGTAGTTGAAGTGTGTATTCAGGCAGGCGCAACGATCCCCAAGAAATACTTGCCAATGATGAGGCTAGACATAGTCCTTCCTGATAGCGAGGAGGCGCGATCTGTTGCATAA

Protein sequence

MLQILPAVSTCSWDPSQMGILIGNVEFTSRHLSALGSYTLRPKFAHKLLSQKVPTALRTLSYTSQEYGKEPVSKKQDMYRQNVDLPAILPKKKKKPYPIPIKQIKRAARADKELAQRGIEKPLEPGKNGLLVPDLIPVAHQVMDAWKILIKGLSHLLHVIPVYACRECSEVHVAHSGHHIQDCLGATSATRRSFHSWVTGSINDVLVPIESYHLYDPFGRRIKHETRFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPIQMIGKKVIDRGGNMEEPKPWKSCDSYPLLDFDTQGAPQRFAPPLPEDVPRIAQETIAAYETVRYGVRMLMKKYTVKACGYCPEVHVGPWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYGKAPAVVEVCIQAGATIPKKYLPMMRLDIVLPDSEEARSVA

Homology

[Close]

BLAST of Cucsat.G8884 vs. ExPASy Swiss-Prot
Match: Q9XIR4 (APO protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APO1 PE=2 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 1.7e-120
Identity = 199/298 (66.78%), Postives = 240/298 (80.54%), Query Frame = 0


Query: 2   LNLKSIVMLNSKCLLILCRECSEVHVAHSGHHIQDCLGATSATRRSFHSWVTGSINDVLV 61
           L +K +  L     +  C EC  VHVA+ GH+I+DC G T++ RR  HSWV G+INDVL+
Sbjct: 139 LLIKGLAQLLHVVPVFACSECGAVHVANVGHNIRDCNGPTNSQRRGSHSWVKGTINDVLI 198

Query: 62  PIESYHLYDPFGRRIKHETRFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPIQMIGKKVI 121
           P+ESYH+YDPFGRRIKHETRFEY+RIPA+VELCIQAGV+IPEYP RRRT+PI+M+GK+VI
Sbjct: 199 PVESYHMYDPFGRRIKHETRFEYERIPALVELCIQAGVEIPEYPCRRRTQPIRMMGKRVI 258

Query: 122 DRGGNMEEP-KPWKSCD-SYPLLDFDTQGAPQRFAPPLPEDVPRIAQETIAAYETVRYGV 181
           DRGG  +EP KP  S   S PL + DT G  +R+ PP PED+P+IAQET+ AYE VR GV
Sbjct: 259 DRGGYHKEPEKPQTSSSLSSPLAELDTLGVFERYPPPTPEDIPKIAQETMDAYEKVRLGV 318

Query: 182 RMLMKKYTVKACGYCPEVHVGPWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWH 241
             LM+K+TVKACGYC EVHVGPWGH+ KLCGEFKHQWRDGKHGWQDA +DEV P NYVWH
Sbjct: 319 TKLMRKFTVKACGYCSEVHVGPWGHSVKLCGEFKHQWRDGKHGWQDALVDEVFPPNYVWH 378

Query: 242 VRDPKGPPLIGTLKRFYGKAPAVVEVCIQAGATIPKKYLPMMRLDIVLPDSEEARSVA 298
           VRD KG PL G L+RFYGKAPA+VE+C+ +GA +P++Y  MMRLDI++PDS+EA  VA
Sbjct: 379 VRDLKGNPLTGNLRRFYGKAPALVEICMHSGARVPQRYKAMMRLDIIVPDSQEADMVA 436

[Close]

BLAST of Cucsat.G8884 vs. ExPASy Swiss-Prot
Match: Q8W4A5 (APO protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APO2 PE=2 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 7.0e-79
Identity = 137/280 (48.93%), Postives = 181/280 (64.64%), Query Frame = 0


Query: 19  CRECSEVHVAHSGHHIQDCLGATSATRRSFHSWVTGSINDVLVPIESYHLYDPFGRRIKH 78
           C  C+E+HV   GH  + C G  ++ R+  H W    I DV+VP+E+YHL+D  G+RI+H
Sbjct: 163 CGWCNEIHVGPYGHPFKSCKGPNTSQRKGLHEWTNSVIEDVIVPLEAYHLFDRLGKRIRH 222

Query: 79  ETRFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPIQMIGKKVIDRGGNMEEPKPWKSCDS 138
           + RF   R+PAVVELCIQ GV+IPE+P++RR KPI  IGK         E P P      
Sbjct: 223 DERFSIPRVPAVVELCIQGGVEIPEFPAKRRRKPIIRIGKSEFVDADETELPDPEPQPPP 282

Query: 139 YPLLDFDTQGAPQRFAPP-LPEDVPRIAQETIAAYETVRYGVRMLMKKYTVKACGYCPEV 198
            PLL   T+       PP   E+   +A+ET+ A+E +R G + LM+ Y V+ CGYCPEV
Sbjct: 283 VPLL---TELPVSEITPPSSEEETVSLAEETLQAWEEMRAGAKKLMRMYRVRVCGYCPEV 342

Query: 199 HVGPWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYG 258
           HVGP GH A+ CG FKHQ R+G+HGWQ A LD+++P  YVWHV D  GPP+   L+ FYG
Sbjct: 343 HVGPTGHKAQNCGAFKHQQRNGQHGWQSAVLDDLIPPRYVWHVPDVNGPPMQRELRSFYG 402

Query: 259 KAPAVVEVCIQAGATIPKKYLPMMRLDIVLPDS-EEARSV 297
           +APAVVE+C QAGA +P+ Y   MRL++ +P S +EA  V
Sbjct: 403 QAPAVVEICAQAGAVVPEHYRATMRLEVGIPSSVKEAEMV 439

[Close]

BLAST of Cucsat.G8884 vs. ExPASy Swiss-Prot
Match: Q9FH50 (APO protein 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=APO3 PE=2 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 1.5e-65
Identity = 120/281 (42.70%), Postives = 176/281 (62.63%), Query Frame = 0


Query: 19  CRECSEVHVAHSGHHIQDCLGATSATRRSFHSWVTGSINDVLVPIESYHLYDPFGR-RIK 78
           CR C+EVH+   GH I+ C G  S +R + H W  G ++DV++  + +HLYD   + R+ 
Sbjct: 128 CRLCAEVHIGKQGHEIRTCTGPGSGSRSATHVWKRGRVSDVVLFPKCFHLYDRAVKPRVI 187

Query: 79  HETRFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPIQMIGKKVIDRGGNMEEPKPWKSCD 138
           H+ RF   +I AV+ELCIQAGVD+ ++PS+RR+KP+  I  +++D     +         
Sbjct: 188 HDERFTVPKISAVLELCIQAGVDLEKFPSKRRSKPVYSIEGRIVDFEDVNDGNSELAVTS 247

Query: 139 SYPLLDFDTQGAPQRFAPPLPEDVPRIAQETIAAYETVRYGVRMLMKKYTVKACGYCPEV 198
           +  L+  D +   ++      + +  ++ ET+ ++  +  GVR LM++Y V  CGYCPE+
Sbjct: 248 TTTLIQEDDRCKEEK------KSLKELSFETMESWFEMVLGVRKLMERYRVWTCGYCPEI 307

Query: 199 HVGPWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDP-KGPPLIGTLKRFY 258
            VGP GH  ++C   KHQ RDG H WQ+AT+D+V+   YVWHVRDP  G  L  +LKRFY
Sbjct: 308 QVGPKGHKVRMCKATKHQMRDGMHAWQEATIDDVVGPTYVWHVRDPTDGSVLDNSLKRFY 367

Query: 259 GKAPAVVEVCIQAGATIPKKYLPMMRLDIVLPDSEEARSVA 298
           GKAPAV+E+C+Q GA +P +Y  MMRLD+V P  +E   VA
Sbjct: 368 GKAPAVIEMCVQGGAPVPDQYNSMMRLDVVYPQRDEVDLVA 402

[Close]

BLAST of Cucsat.G8884 vs. ExPASy Swiss-Prot
Match: Q9LSZ0 (APO protein 4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=APO4 PE=2 SV=2)

HSP 1 Score: 184.9 bits (468), Expect = 1.3e-45
Identity = 95/267 (35.58%), Postives = 139/267 (52.06%), Query Frame = 0


Query: 16  LILCRECSEVHVAHSGHHIQDCLGATSATRRSFHSWVTGSINDVLVPIESYHLYDPFGRR 75
           ++ C+ CSEV V   GH I+ C           H WV GSIND+LVP+ESYHL++     
Sbjct: 85  VLTCKFCSEVFVGKEGHLIETCRSYIRRGNNRLHEWVPGSINDILVPVESYHLHNISQGV 144

Query: 76  IKHETRFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPIQMIGKKVIDRGGNMEEPKPWKS 135
           I+H+ RF+YDR+PA++ELC QAG   PE               +++      + P+    
Sbjct: 145 IRHQERFDYDRVPAILELCCQAGAIHPE---------------EILQYSEIHDNPQ---- 204

Query: 136 CDSYPLLDFDTQGAPQRFAPPLPEDVPRIAQETIAAYETVRYGVRMLMKKYTVKACGYCP 195
                + + D +  P         D+  +    + A+E VR GV+ L+  Y  K C  C 
Sbjct: 205 -----ISEEDIRSLP-------AGDLKYVGANALMAWEKVRAGVKKLLLVYPSKVCKRCK 264

Query: 196 EVHVGPWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRF 255
           EVHVGP GH A+LCG FK++   G H W+ A +++++P   VWH R      L+   + +
Sbjct: 265 EVHVGPSGHKARLCGVFKYESWRGTHYWEKAGVNDLVPEKMVWHRRPQDPVVLVDEGRSY 320

Query: 256 YGKAPAVVEVCIQAGATIPKKYLPMMR 283
           YG APA+V +C   GA +P KY   M+
Sbjct: 325 YGHAPAIVSLCSHTGAIVPVKYACKMK 320

[Close]

BLAST of Cucsat.G8884 vs. NCBI nr
Match: XP_004149527.1 (APO protein 1, chloroplastic [Cucumis sativus] >KGN54971.1 hypothetical protein Csa_012644 [Cucumis sativus])

HSP 1 Score: 601 bits (1550), Expect = 1.28e-214
Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 0


Query: 19  CRECSEVHVAHSGHHIQDCLGATSATRRSFHSWVTGSINDVLVPIESYHLYDPFGRRIKH 78
           CRECSEVHVAHSGHHIQDCLGATSATRRSFHSWVTGSINDVLVPIESYHLYDPFGRRIKH
Sbjct: 165 CRECSEVHVAHSGHHIQDCLGATSATRRSFHSWVTGSINDVLVPIESYHLYDPFGRRIKH 224

Query: 79  ETRFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPIQMIGKKVIDRGGNMEEPKPWKSCDS 138
           ETRFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPIQMIGKKVIDRGGNMEEPKPWKSCDS
Sbjct: 225 ETRFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPIQMIGKKVIDRGGNMEEPKPWKSCDS 284

Query: 139 YPLLDFDTQGAPQRFAPPLPEDVPRIAQETIAAYETVRYGVRMLMKKYTVKACGYCPEVH 198
           YPLLDFDTQGAPQRFAPPLPEDVPRIAQETIAAYETVRYGVRMLMKKYTVKACGYCPEVH
Sbjct: 285 YPLLDFDTQGAPQRFAPPLPEDVPRIAQETIAAYETVRYGVRMLMKKYTVKACGYCPEVH 344

Query: 199 VGPWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYGK 258
           VGPWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYGK
Sbjct: 345 VGPWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYGK 404

Query: 259 APAVVEVCIQAGATIPKKYLPMMRLDIVLPDSEEARSVA 297
           APAVVEVCIQAGATIPKKYLPMMRLDIVLPDSEEARSVA
Sbjct: 405 APAVVEVCIQAGATIPKKYLPMMRLDIVLPDSEEARSVA 443

[Close]

BLAST of Cucsat.G8884 vs. NCBI nr
Match: XP_008464665.1 (PREDICTED: APO protein 1, chloroplastic [Cucumis melo])

HSP 1 Score: 584 bits (1506), Expect = 6.42e-208
Identity = 269/279 (96.42%), Postives = 275/279 (98.57%), Query Frame = 0


Query: 19  CRECSEVHVAHSGHHIQDCLGATSATRRSFHSWVTGSINDVLVPIESYHLYDPFGRRIKH 78
           CRECSEVHVAHSGHHIQDCLG+TSA RRSFHSWVTGSINDVLVPIESYHLYDPFGRRIKH
Sbjct: 165 CRECSEVHVAHSGHHIQDCLGSTSAMRRSFHSWVTGSINDVLVPIESYHLYDPFGRRIKH 224

Query: 79  ETRFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPIQMIGKKVIDRGGNMEEPKPWKSCDS 138
           ETRFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPI+MIGKKVIDRGGNMEEPKPW+SC+S
Sbjct: 225 ETRFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPIRMIGKKVIDRGGNMEEPKPWQSCES 284

Query: 139 YPLLDFDTQGAPQRFAPPLPEDVPRIAQETIAAYETVRYGVRMLMKKYTVKACGYCPEVH 198
           YPLLDFDTQGA QRFAPPLP+DVPRIAQETI AYETVRYGVRMLMKKYTVKACGYCPEVH
Sbjct: 285 YPLLDFDTQGASQRFAPPLPDDVPRIAQETIEAYETVRYGVRMLMKKYTVKACGYCPEVH 344

Query: 199 VGPWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYGK 258
           VGPWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYGK
Sbjct: 345 VGPWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYGK 404

Query: 259 APAVVEVCIQAGATIPKKYLPMMRLDIVLPDSEEARSVA 297
           APAVVEVC+QAGATIPKKYLPMMRLDIVLPD EEARSVA
Sbjct: 405 APAVVEVCMQAGATIPKKYLPMMRLDIVLPDGEEARSVA 443

[Close]

BLAST of Cucsat.G8884 vs. NCBI nr
Match: TYK28069.1 (APO protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 584 bits (1506), Expect = 2.09e-207
Identity = 269/279 (96.42%), Postives = 275/279 (98.57%), Query Frame = 0


Query: 19  CRECSEVHVAHSGHHIQDCLGATSATRRSFHSWVTGSINDVLVPIESYHLYDPFGRRIKH 78
           CRECSEVHVAHSGHHIQDCLG+TSA RRSFHSWVTGSINDVLVPIESYHLYDPFGRRIKH
Sbjct: 198 CRECSEVHVAHSGHHIQDCLGSTSAMRRSFHSWVTGSINDVLVPIESYHLYDPFGRRIKH 257

Query: 79  ETRFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPIQMIGKKVIDRGGNMEEPKPWKSCDS 138
           ETRFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPI+MIGKKVIDRGGNMEEPKPW+SC+S
Sbjct: 258 ETRFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPIRMIGKKVIDRGGNMEEPKPWQSCES 317

Query: 139 YPLLDFDTQGAPQRFAPPLPEDVPRIAQETIAAYETVRYGVRMLMKKYTVKACGYCPEVH 198
           YPLLDFDTQGA QRFAPPLP+DVPRIAQETI AYETVRYGVRMLMKKYTVKACGYCPEVH
Sbjct: 318 YPLLDFDTQGASQRFAPPLPDDVPRIAQETIEAYETVRYGVRMLMKKYTVKACGYCPEVH 377

Query: 199 VGPWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYGK 258
           VGPWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYGK
Sbjct: 378 VGPWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYGK 437

Query: 259 APAVVEVCIQAGATIPKKYLPMMRLDIVLPDSEEARSVA 297
           APAVVEVC+QAGATIPKKYLPMMRLDIVLPD EEARSVA
Sbjct: 438 APAVVEVCMQAGATIPKKYLPMMRLDIVLPDGEEARSVA 476

[Close]

BLAST of Cucsat.G8884 vs. NCBI nr
Match: KAA0063366.1 (APO protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 580 bits (1494), Expect = 1.30e-205
Identity = 269/280 (96.07%), Postives = 275/280 (98.21%), Query Frame = 0


Query: 19  CR-ECSEVHVAHSGHHIQDCLGATSATRRSFHSWVTGSINDVLVPIESYHLYDPFGRRIK 78
           CR ECSEVHVAHSGHHIQDCLG+TSA RRSFHSWVTGSINDVLVPIESYHLYDPFGRRIK
Sbjct: 195 CRSECSEVHVAHSGHHIQDCLGSTSAMRRSFHSWVTGSINDVLVPIESYHLYDPFGRRIK 254

Query: 79  HETRFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPIQMIGKKVIDRGGNMEEPKPWKSCD 138
           HETRFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPI+MIGKKVIDRGGNMEEPKPW+SC+
Sbjct: 255 HETRFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPIRMIGKKVIDRGGNMEEPKPWQSCE 314

Query: 139 SYPLLDFDTQGAPQRFAPPLPEDVPRIAQETIAAYETVRYGVRMLMKKYTVKACGYCPEV 198
           SYPLLDFDTQGA QRFAPPLP+DVPRIAQETI AYETVRYGVRMLMKKYTVKACGYCPEV
Sbjct: 315 SYPLLDFDTQGASQRFAPPLPDDVPRIAQETIEAYETVRYGVRMLMKKYTVKACGYCPEV 374

Query: 199 HVGPWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYG 258
           HVGPWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYG
Sbjct: 375 HVGPWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYG 434

Query: 259 KAPAVVEVCIQAGATIPKKYLPMMRLDIVLPDSEEARSVA 297
           KAPAVVEVC+QAGATIPKKYLPMMRLDIVLPD EEARSVA
Sbjct: 435 KAPAVVEVCMQAGATIPKKYLPMMRLDIVLPDGEEARSVA 474

[Close]

BLAST of Cucsat.G8884 vs. NCBI nr
Match: XP_038897981.1 (APO protein 1, chloroplastic [Benincasa hispida] >XP_038897983.1 APO protein 1, chloroplastic [Benincasa hispida] >XP_038897984.1 APO protein 1, chloroplastic [Benincasa hispida])

HSP 1 Score: 561 bits (1447), Expect = 6.13e-199
Identity = 260/279 (93.19%), Postives = 268/279 (96.06%), Query Frame = 0


Query: 19  CRECSEVHVAHSGHHIQDCLGATSATRRSFHSWVTGSINDVLVPIESYHLYDPFGRRIKH 78
           CRECSEVHVAHSGHHIQDCLG TSA RRSFHSWVTGSINDVLVPIESYHLYDPFGRRIKH
Sbjct: 165 CRECSEVHVAHSGHHIQDCLGPTSAMRRSFHSWVTGSINDVLVPIESYHLYDPFGRRIKH 224

Query: 79  ETRFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPIQMIGKKVIDRGGNMEEPKPWKSCDS 138
           ETRFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPI+MIGKKVIDRGGN+EEPKPW++ DS
Sbjct: 225 ETRFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPIRMIGKKVIDRGGNIEEPKPWQAADS 284

Query: 139 YPLLDFDTQGAPQRFAPPLPEDVPRIAQETIAAYETVRYGVRMLMKKYTVKACGYCPEVH 198
           YPLLDFDTQ A QRFAPPLPEDVPRIAQET+ AYETVRYGVR LM+KYTVKACGYC EVH
Sbjct: 285 YPLLDFDTQRASQRFAPPLPEDVPRIAQETMEAYETVRYGVRRLMRKYTVKACGYCSEVH 344

Query: 199 VGPWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYGK 258
           VGPWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLP NYVWHVRDPKGP LIG LKRFYGK
Sbjct: 345 VGPWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPPNYVWHVRDPKGPTLIGALKRFYGK 404

Query: 259 APAVVEVCIQAGATIPKKYLPMMRLDIVLPDSEEARSVA 297
           APAVVEVC+QAGATIP+KYLPMMRLDIVLPDSEEARSVA
Sbjct: 405 APAVVEVCMQAGATIPEKYLPMMRLDIVLPDSEEARSVA 443

[Close]

BLAST of Cucsat.G8884 vs. ExPASy TrEMBL
Match: A0A0A0L4B9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G617380 PE=4 SV=1)

HSP 1 Score: 601 bits (1550), Expect = 6.22e-215
Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 0


Query: 19  CRECSEVHVAHSGHHIQDCLGATSATRRSFHSWVTGSINDVLVPIESYHLYDPFGRRIKH 78
           CRECSEVHVAHSGHHIQDCLGATSATRRSFHSWVTGSINDVLVPIESYHLYDPFGRRIKH
Sbjct: 165 CRECSEVHVAHSGHHIQDCLGATSATRRSFHSWVTGSINDVLVPIESYHLYDPFGRRIKH 224

Query: 79  ETRFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPIQMIGKKVIDRGGNMEEPKPWKSCDS 138
           ETRFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPIQMIGKKVIDRGGNMEEPKPWKSCDS
Sbjct: 225 ETRFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPIQMIGKKVIDRGGNMEEPKPWKSCDS 284

Query: 139 YPLLDFDTQGAPQRFAPPLPEDVPRIAQETIAAYETVRYGVRMLMKKYTVKACGYCPEVH 198
           YPLLDFDTQGAPQRFAPPLPEDVPRIAQETIAAYETVRYGVRMLMKKYTVKACGYCPEVH
Sbjct: 285 YPLLDFDTQGAPQRFAPPLPEDVPRIAQETIAAYETVRYGVRMLMKKYTVKACGYCPEVH 344

Query: 199 VGPWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYGK 258
           VGPWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYGK
Sbjct: 345 VGPWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYGK 404

Query: 259 APAVVEVCIQAGATIPKKYLPMMRLDIVLPDSEEARSVA 297
           APAVVEVCIQAGATIPKKYLPMMRLDIVLPDSEEARSVA
Sbjct: 405 APAVVEVCIQAGATIPKKYLPMMRLDIVLPDSEEARSVA 443

[Close]

BLAST of Cucsat.G8884 vs. ExPASy TrEMBL
Match: A0A1S3CM36 (APO protein 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502498 PE=4 SV=1)

HSP 1 Score: 584 bits (1506), Expect = 3.11e-208
Identity = 269/279 (96.42%), Postives = 275/279 (98.57%), Query Frame = 0


Query: 19  CRECSEVHVAHSGHHIQDCLGATSATRRSFHSWVTGSINDVLVPIESYHLYDPFGRRIKH 78
           CRECSEVHVAHSGHHIQDCLG+TSA RRSFHSWVTGSINDVLVPIESYHLYDPFGRRIKH
Sbjct: 165 CRECSEVHVAHSGHHIQDCLGSTSAMRRSFHSWVTGSINDVLVPIESYHLYDPFGRRIKH 224

Query: 79  ETRFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPIQMIGKKVIDRGGNMEEPKPWKSCDS 138
           ETRFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPI+MIGKKVIDRGGNMEEPKPW+SC+S
Sbjct: 225 ETRFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPIRMIGKKVIDRGGNMEEPKPWQSCES 284

Query: 139 YPLLDFDTQGAPQRFAPPLPEDVPRIAQETIAAYETVRYGVRMLMKKYTVKACGYCPEVH 198
           YPLLDFDTQGA QRFAPPLP+DVPRIAQETI AYETVRYGVRMLMKKYTVKACGYCPEVH
Sbjct: 285 YPLLDFDTQGASQRFAPPLPDDVPRIAQETIEAYETVRYGVRMLMKKYTVKACGYCPEVH 344

Query: 199 VGPWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYGK 258
           VGPWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYGK
Sbjct: 345 VGPWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYGK 404

Query: 259 APAVVEVCIQAGATIPKKYLPMMRLDIVLPDSEEARSVA 297
           APAVVEVC+QAGATIPKKYLPMMRLDIVLPD EEARSVA
Sbjct: 405 APAVVEVCMQAGATIPKKYLPMMRLDIVLPDGEEARSVA 443

[Close]

BLAST of Cucsat.G8884 vs. ExPASy TrEMBL
Match: A0A5D3DXA7 (APO protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G003310 PE=4 SV=1)

HSP 1 Score: 584 bits (1506), Expect = 1.01e-207
Identity = 269/279 (96.42%), Postives = 275/279 (98.57%), Query Frame = 0


Query: 19  CRECSEVHVAHSGHHIQDCLGATSATRRSFHSWVTGSINDVLVPIESYHLYDPFGRRIKH 78
           CRECSEVHVAHSGHHIQDCLG+TSA RRSFHSWVTGSINDVLVPIESYHLYDPFGRRIKH
Sbjct: 198 CRECSEVHVAHSGHHIQDCLGSTSAMRRSFHSWVTGSINDVLVPIESYHLYDPFGRRIKH 257

Query: 79  ETRFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPIQMIGKKVIDRGGNMEEPKPWKSCDS 138
           ETRFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPI+MIGKKVIDRGGNMEEPKPW+SC+S
Sbjct: 258 ETRFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPIRMIGKKVIDRGGNMEEPKPWQSCES 317

Query: 139 YPLLDFDTQGAPQRFAPPLPEDVPRIAQETIAAYETVRYGVRMLMKKYTVKACGYCPEVH 198
           YPLLDFDTQGA QRFAPPLP+DVPRIAQETI AYETVRYGVRMLMKKYTVKACGYCPEVH
Sbjct: 318 YPLLDFDTQGASQRFAPPLPDDVPRIAQETIEAYETVRYGVRMLMKKYTVKACGYCPEVH 377

Query: 199 VGPWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYGK 258
           VGPWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYGK
Sbjct: 378 VGPWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYGK 437

Query: 259 APAVVEVCIQAGATIPKKYLPMMRLDIVLPDSEEARSVA 297
           APAVVEVC+QAGATIPKKYLPMMRLDIVLPD EEARSVA
Sbjct: 438 APAVVEVCMQAGATIPKKYLPMMRLDIVLPDGEEARSVA 476

[Close]

BLAST of Cucsat.G8884 vs. ExPASy TrEMBL
Match: A0A5A7VAB0 (APO protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1505G00410 PE=4 SV=1)

HSP 1 Score: 580 bits (1494), Expect = 6.31e-206
Identity = 269/280 (96.07%), Postives = 275/280 (98.21%), Query Frame = 0


Query: 19  CR-ECSEVHVAHSGHHIQDCLGATSATRRSFHSWVTGSINDVLVPIESYHLYDPFGRRIK 78
           CR ECSEVHVAHSGHHIQDCLG+TSA RRSFHSWVTGSINDVLVPIESYHLYDPFGRRIK
Sbjct: 195 CRSECSEVHVAHSGHHIQDCLGSTSAMRRSFHSWVTGSINDVLVPIESYHLYDPFGRRIK 254

Query: 79  HETRFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPIQMIGKKVIDRGGNMEEPKPWKSCD 138
           HETRFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPI+MIGKKVIDRGGNMEEPKPW+SC+
Sbjct: 255 HETRFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPIRMIGKKVIDRGGNMEEPKPWQSCE 314

Query: 139 SYPLLDFDTQGAPQRFAPPLPEDVPRIAQETIAAYETVRYGVRMLMKKYTVKACGYCPEV 198
           SYPLLDFDTQGA QRFAPPLP+DVPRIAQETI AYETVRYGVRMLMKKYTVKACGYCPEV
Sbjct: 315 SYPLLDFDTQGASQRFAPPLPDDVPRIAQETIEAYETVRYGVRMLMKKYTVKACGYCPEV 374

Query: 199 HVGPWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYG 258
           HVGPWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYG
Sbjct: 375 HVGPWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYG 434

Query: 259 KAPAVVEVCIQAGATIPKKYLPMMRLDIVLPDSEEARSVA 297
           KAPAVVEVC+QAGATIPKKYLPMMRLDIVLPD EEARSVA
Sbjct: 435 KAPAVVEVCMQAGATIPKKYLPMMRLDIVLPDGEEARSVA 474

[Close]

BLAST of Cucsat.G8884 vs. ExPASy TrEMBL
Match: A0A6J1C0M4 (APO protein 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111006980 PE=4 SV=1)

HSP 1 Score: 556 bits (1434), Expect = 2.82e-197
Identity = 259/279 (92.83%), Postives = 266/279 (95.34%), Query Frame = 0


Query: 19  CRECSEVHVAHSGHHIQDCLGATSATRRSFHSWVTGSINDVLVPIESYHLYDPFGRRIKH 78
           CRECSEVHVA SGH IQDCLG+TSA RRSFH WVTGSINDVLVPIESYHLYDPFGRRI H
Sbjct: 165 CRECSEVHVAQSGHRIQDCLGSTSAIRRSFHLWVTGSINDVLVPIESYHLYDPFGRRIMH 224

Query: 79  ETRFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPIQMIGKKVIDRGGNMEEPKPWKSCDS 138
           ETRFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPI+MIGKKVIDRGGN+EEPKPWKS DS
Sbjct: 225 ETRFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPIRMIGKKVIDRGGNIEEPKPWKSVDS 284

Query: 139 YPLLDFDTQGAPQRFAPPLPEDVPRIAQETIAAYETVRYGVRMLMKKYTVKACGYCPEVH 198
           YPLLDFDTQGA QRFAPPLP DVPRIAQETI AYETVR GVRMLM+KYTVKACGYC E+H
Sbjct: 285 YPLLDFDTQGASQRFAPPLPLDVPRIAQETIEAYETVRSGVRMLMRKYTVKACGYCSEIH 344

Query: 199 VGPWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYGK 258
           VGPWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLP NYVWHVRDPKGPPL+GTLKRFYGK
Sbjct: 345 VGPWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPPNYVWHVRDPKGPPLMGTLKRFYGK 404

Query: 259 APAVVEVCIQAGATIPKKYLPMMRLDIVLPDSEEARSVA 297
           APAVVEVC+QAGA IPKKYLPMMRLDIVLPDSEEARSVA
Sbjct: 405 APAVVEVCMQAGAQIPKKYLPMMRLDIVLPDSEEARSVA 443

The following BLAST results are available for this feature:

BLAST of Cucsat.G8884 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XIR4	1.7e-120	66.78	APO protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APO1 PE=2 SV=1	[more]
Q8W4A5	7.0e-79	48.93	APO protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APO2 PE=2 SV=1	[more]
Q9FH50	1.5e-65	42.70	APO protein 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=APO3 PE=2 SV=1	[more]
Q9LSZ0	1.3e-45	35.58	APO protein 4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=APO4 PE=2 SV=2	[more]

BLAST of Cucsat.G8884 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149527.1	1.28e-214	100.00	APO protein 1, chloroplastic [Cucumis sativus] >KGN54971.1 hypothetical protein ...	[more]
XP_008464665.1	6.42e-208	96.42	PREDICTED: APO protein 1, chloroplastic [Cucumis melo]	[more]
TYK28069.1	2.09e-207	96.42	APO protein 1 [Cucumis melo var. makuwa]	[more]
KAA0063366.1	1.30e-205	96.07	APO protein 1 [Cucumis melo var. makuwa]	[more]
XP_038897981.1	6.13e-199	93.19	APO protein 1, chloroplastic [Benincasa hispida] >XP_038897983.1 APO protein 1, ...	[more]

BLAST of Cucsat.G8884 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4B9	6.22e-215	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G617380 PE=4 SV=1	[more]
A0A1S3CM36	3.11e-208	96.42	APO protein 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502498 PE=4 SV=1	[more]
A0A5D3DXA7	1.01e-207	96.42	APO protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G003310...	[more]
A0A5A7VAB0	6.31e-206	96.07	APO protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1505G00410...	[more]
A0A6J1C0M4	2.82e-197	92.83	APO protein 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111006980 PE=4...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023342	APO domain	PFAM	PF05634	APO_RNA-bind	coord: 49..161 e-value: 9.3E-23 score: 80.7
IPR023342	APO domain	PROSITE	PS51499	APO	coord: 76..161 score: 26.555983
None	No IPR available	PANTHER	PTHR10388:SF53	APO PROTEIN 1, CHLOROPLASTIC	coord: 1..183
None	No IPR available	PANTHER	PTHR10388	EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1	coord: 1..183

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G8884.T1	Cucsat.G8884.T1	mRNA
Cucsat.G8884.T3	Cucsat.G8884.T3	mRNA
Cucsat.G8884.T12	Cucsat.G8884.T12	mRNA
Cucsat.G8884.T9	Cucsat.G8884.T9	mRNA
Cucsat.G8884.T13	Cucsat.G8884.T13	mRNA
Cucsat.G8884.T5	Cucsat.G8884.T5	mRNA
Cucsat.G8884.T4	Cucsat.G8884.T4	mRNA
Cucsat.G8884.T7	Cucsat.G8884.T7	mRNA
Cucsat.G8884.T6	Cucsat.G8884.T6	mRNA
Cucsat.G8884.T2	Cucsat.G8884.T2	mRNA
Cucsat.G8884.T15	Cucsat.G8884.T15	mRNA
Cucsat.G8884.T11	Cucsat.G8884.T11	mRNA
Cucsat.G8884.T16	Cucsat.G8884.T16	mRNA
Cucsat.G8884.T14	Cucsat.G8884.T14	mRNA
Cucsat.G8884.T8	Cucsat.G8884.T8	mRNA
Cucsat.G8884.T10	Cucsat.G8884.T10	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding