Cucsat.G8884.T10 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AGATGAATGTAGTTTTACTGGCTCACACTTTCGGTTCTTTTCACCCTCCTTTTGTTATAATACATTTGAAAAAAATAATTAAAAAAAAGCGTCCATTTAAAAATTTTCGCAGCCTCCACATTTCTCAGATTATTTTTCGCTCCACCTCTGCTCCGGCGGTAACAACCACTCCTTCTTCAACTTCATAGTTTATCTTCTTCAAATTTCTCTAATTGAAGCACTTAAATCTTTGATTTGTTCGAAATTATTGTTATATAATACCTTAGCTCTCAATTTCTCCATCGTTTTTGTTTCTGGTAATTTGAAGTTTGCTATACATCGTCGTTGTAGTTGTAACTACCATGCTTCCTGTTTTTTCGGTTCTGTTGGGACTGATATATGTTTGGTTTCTTTTTCAAGGCAACAAGGCAGCTAGAGAATCGGTGACTTGATGCTCCAGATACTTCCGGCGGTTTCTACTTGTTCTTGGGACCCATCTCAAATGGGTAGGTTTGTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTTATTTTTTGTATTGATACCTAAATTTGTAATCTCTGGGAGGAATTGAAAGGACGAGGACAATAGATGATAACTCACCATTCATATCGGTGTGGTGCTTGGTCACCATCACTCATTGGATTGGATCAAGTCAGCATTCGTTTAGAGAGCTAAAGAGTAGAGCATACCTCAAATATCGTTACCTCTCATGATTGTCTAGAAATAGGTTTTGTAACTGTCATTTGCTCATTAACTTTCCGAGTCATTAAGGAGGGTCGGTCTCCCTACACTAAGTGAAATTTACTTATGGCTACATGAACAACCCTATAGGTAGGTTTCTATATTTTGACAGATTAACTTATGACTTCATGGCTGACTCCATAGGTTGATCTCTTCCAAATTAAGCTCTTCTATTGGAATGATCCATTGGGAATTTGGTCGTCCGAGCTAACTATTTAGTCATACTTCTTACCCACAGCATTTTGAATTATAGAAAGAGTGTCCTTCATTGCTCCATTGTTGTTCACTAATTGGAGGCGTTGTTCATCCATAACTGCGTAGTAGCTACTGCCATTTGATTCCAATTGAAGTCTGAAAGATGTTTTGTTGTTGAACAATGGCTTGAGCTTATATCGGACTGATTTTATTGAATGTTTTAGGTATCCTCATTGGTAATGTGGAGTTTACAAGCCGGCACCTTTCTGCACTTGGATCATATACTCTTCGACCGAAGGTTCAAATGCTTATCCAAATCATCTCTACGAAATTTCAGTACTCTCTTGCTTGATTTTCTCTTGATTCTAGTGATCCTGTTGATGAAATGACATGCCTGGCTATGGATTTTGGATCATTTACCAAGACATGTTTATATTACCAGATCATATCTTGGTTTGTAATCCTACTTCGAAATCATTACCCTTCCAAATGGTTAAAACATGAATACTCTCAGTTTAAGTAAAATGATGTTTCTGTTACATCTTGTATTTGTATCTCAGATTTTGAGGGCATCCTTCTATGCGAGTCACTATCTCACTTTATTCTTGAAGATAATTACTATTGATTTTTAATGGTTCTCCTACTTCCTATGAGAAACTCTGAGAGAAATAAGATCTTGCAATATTCTTCTATTGCAGTTTGCGCATAAACTGTTGTCTCAAAAAGTGCCAACAGCATTAAGGACTTTATCCTATACCAGTCAGGAATATGGAAAAGAACCTGTTTCGAAGAAACAAGACATGTATCGCCAGAATGTGGATCTTCCAGCCATATTGCCTAAAAAGAAAAAGAAACCTTATCCTATTCCCATAAAGCAAATAAAGCGGGCTGCGAGAGCTGACAAAGAGCTTGCACAAAGGGGTATAGAGAAACCACTTGAACCTGGGAAAAATGGTTTACTTGTACCTGATTTGATACCTGTTGCTCATCAAGTAATGGATGCTTGGAAAATTTTGATTAAGGGCCTTTCACATCTTTTACATGTTATTCCAGTATATGCTTGCAGGTTGTTCTTTTCTGGTCAAGAAGTTTTAATATGAAATATTTTTAGCGAGCTCGTTTGGCTCTGTCCTTCTAGTCTTTCAGCATGCTAAATTTAAAATCCATAGTTATGCTGAATAGCAAATGTCTTTTGATTCTGTGTAGGGAATGTTCAGAAGTTCATGTAGCCCATTCAGGCCACCATATTCAAGATTGTCTTGGTGCTACCAGTGCAACGCGTCGAAGCTTCCACTCATGGGTCACAGGTTCTATTAATGATGTCTTAGTCCCTATTGAGTCATACCATCTTTATGATCCTTTTGGCCGGCGCATTAAGCATGAAACACGATTCGAATATGATAGAATTCCAGCTGTTGTAGAGCTCTGCATCCAGGCCGGTGTGGATATACCGGAGTATCCTTCACGTAGAAGAACTAAACCCATCCAAATGATTGGAAAGAAGGTAATTGATCGAGGTGGAAATATGGAGGAGCCTAAACCTTGGAAATCTTGTGATTCTTACCCTCTTCTTGATTTCGATACACAAGGGGCTCCTCAACGATTTGCACCTCCTCTACCTGAAGATGTCCCTAGAATTGCTCAAGAAACAATCGCAGCATATGAAACTGTTAGGTATGGTGTAAGGATGTTGATGAAGAAGTATACAGTGAAGGCTTGTGGGTACTGCCCTGAGGTTCATGTAGGACCATGGGGTCATAATGCTAAACTATGTGGAGAATTTAAGCACCAGTGGAGGGATGGAAAGCATGGTTGGCAGGATGCAACTTTAGACGAAGTACTGCCTCGCAATTATGTTTGGCATGTCCGTGATCCAAAAGGTCCGCCATTGATTGGTACATTGAAGAGGTTTTATGGTAAAGCTCCTGCTGTAGTTGAAGTGTGTATTCAGGCAGGCGCAACGATCCCCAAGAAATACTTGCCAATGATGAGGCTAGACATAGTCCTTCCTGATAGCGAGGAGGCGCGATCTGTTGCATAATTGCGTTGGCCAAAGTCATGGCGATTTCATCTGCACAGGTCTGTCCCAAGACCTCTATTCTTATCTTCGAGTTTCTGAAGAGATAAATTTTAAACATCAACAGTTGATGGAACTACAGCTTAGATGCTACATTAAGAGCAGTTAGAAAAGTGAGGATATCAGATGTATATTAAGGTTTGACTAGATTTCCTTGTTACAGTGTCTTCCTTGATCCCCTTGTTTGTATAGTTAAGATTTCCTGACCTTCAACCATTTGAATACTTGATAGATGCCGCTTTAACTTGTTGATTGACTTCGAGATCTATAATTGTGAAATTCAGAATGAAAATATGAAGTAGAAGGAGCCTCTTACAGTTATGTTGTATGTTGTGACGAGTCTTGAAATTGGAAATTTGTAATGTCAGCAAAGGATATTGACAAGTAAAA ATGACATGCCTGGCTATGGATTTTGGATCATTTACCAAGACATGTTTATATTACCAGATCATATCTTGGGAATGTTCAGAAGTTCATGTAGCCCATTCAGGCCACCATATTCAAGATTGTCTTGGTGCTACCAGTGCAACGCGTCGAAGCTTCCACTCATGGGTCACAGGTTCTATTAATGATGTCTTAGTCCCTATTGAGTCATACCATCTTTATGATCCTTTTGGCCGGCGCATTAAGCATGAAACACGATTCGAATATGATAGAATTCCAGCTGTTGTAGAGCTCTGCATCCAGGCCGGTGTGGATATACCGGAGTATCCTTCACGTAGAAGAACTAAACCCATCCAAATGATTGGAAAGAAGGTAATTGATCGAGGTGGAAATATGGAGGAGCCTAAACCTTGGAAATCTTGTGATTCTTACCCTCTTCTTGATTTCGATACACAAGGGGCTCCTCAACGATTTGCACCTCCTCTACCTGAAGATGTCCCTAGAATTGCTCAAGAAACAATCGCAGCATATGAAACTGTTAGGTATGGTGTAAGGATGTTGATGAAGAAGTATACAGTGAAGGCTTGTGGGTACTGCCCTGAGGTTCATGTAGGACCATGGGGTCATAATGCTAAACTATGTGGAGAATTTAAGCACCAGTGGAGGGATGGAAAGCATGGTTGGCAGGATGCAACTTTAGACGAAGTACTGCCTCGCAATTATGTTTGGCATGTCCGTGATCCAAAAGGTCCGCCATTGATTGGTACATTGAAGAGGTTTTATGGTAAAGCTCCTGCTGTAGTTGAAGTGTGTATTCAGGCAGGCGCAACGATCCCCAAGAAATACTTGCCAATGATGAGGCTAGACATAGTCCTTCCTGATAGCGAGGAGGCGCGATCTGTTGCATAA MTCLAMDFGSFTKTCLYYQIISWECSEVHVAHSGHHIQDCLGATSATRRSFHSWVTGSINDVLVPIESYHLYDPFGRRIKHETRFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPIQMIGKKVIDRGGNMEEPKPWKSCDSYPLLDFDTQGAPQRFAPPLPEDVPRIAQETIAAYETVRYGVRMLMKKYTVKACGYCPEVHVGPWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYGKAPAVVEVCIQAGATIPKKYLPMMRLDIVLPDSEEARSVA Homology
BLAST of Cucsat.G8884.T10 vs. ExPASy Swiss-Prot
Match: Q9XIR4 (APO protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APO1 PE=2 SV=1) HSP 1 Score: 431.8 bits (1109), Expect = 6.4e-120 Identity = 195/279 (69.89%), Postives = 233/279 (83.51%), Query Frame = 0
BLAST of Cucsat.G8884.T10 vs. ExPASy Swiss-Prot
Match: Q8W4A5 (APO protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APO2 PE=2 SV=1) HSP 1 Score: 293.5 bits (750), Expect = 2.7e-78 Identity = 136/277 (49.10%), Postives = 180/277 (64.98%), Query Frame = 0
BLAST of Cucsat.G8884.T10 vs. ExPASy Swiss-Prot
Match: Q9FH50 (APO protein 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=APO3 PE=2 SV=1) HSP 1 Score: 246.9 bits (629), Expect = 2.9e-64 Identity = 118/278 (42.45%), Postives = 174/278 (62.59%), Query Frame = 0
BLAST of Cucsat.G8884.T10 vs. ExPASy Swiss-Prot
Match: Q9LSZ0 (APO protein 4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=APO4 PE=2 SV=2) HSP 1 Score: 181.4 bits (459), Expect = 1.5e-44 Identity = 94/261 (36.02%), Postives = 135/261 (51.72%), Query Frame = 0
BLAST of Cucsat.G8884.T10 vs. NCBI nr
Match: XP_004149527.1 (APO protein 1, chloroplastic [Cucumis sativus] >KGN54971.1 hypothetical protein Csa_012644 [Cucumis sativus]) HSP 1 Score: 595 bits (1533), Expect = 5.62e-212 Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 0
BLAST of Cucsat.G8884.T10 vs. NCBI nr
Match: XP_008464665.1 (PREDICTED: APO protein 1, chloroplastic [Cucumis melo]) HSP 1 Score: 578 bits (1489), Expect = 2.80e-205 Identity = 267/277 (96.39%), Postives = 273/277 (98.56%), Query Frame = 0
BLAST of Cucsat.G8884.T10 vs. NCBI nr
Match: KAA0063366.1 (APO protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 578 bits (1489), Expect = 8.48e-205 Identity = 267/277 (96.39%), Postives = 273/277 (98.56%), Query Frame = 0
BLAST of Cucsat.G8884.T10 vs. NCBI nr
Match: TYK28069.1 (APO protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 578 bits (1489), Expect = 9.11e-205 Identity = 267/277 (96.39%), Postives = 273/277 (98.56%), Query Frame = 0
BLAST of Cucsat.G8884.T10 vs. NCBI nr
Match: XP_038897981.1 (APO protein 1, chloroplastic [Benincasa hispida] >XP_038897983.1 APO protein 1, chloroplastic [Benincasa hispida] >XP_038897984.1 APO protein 1, chloroplastic [Benincasa hispida]) HSP 1 Score: 555 bits (1430), Expect = 2.67e-196 Identity = 258/277 (93.14%), Postives = 266/277 (96.03%), Query Frame = 0
BLAST of Cucsat.G8884.T10 vs. ExPASy TrEMBL
Match: A0A0A0L4B9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G617380 PE=4 SV=1) HSP 1 Score: 595 bits (1533), Expect = 2.72e-212 Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 0
BLAST of Cucsat.G8884.T10 vs. ExPASy TrEMBL
Match: A0A1S3CM36 (APO protein 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502498 PE=4 SV=1) HSP 1 Score: 578 bits (1489), Expect = 1.36e-205 Identity = 267/277 (96.39%), Postives = 273/277 (98.56%), Query Frame = 0
BLAST of Cucsat.G8884.T10 vs. ExPASy TrEMBL
Match: A0A5A7VAB0 (APO protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1505G00410 PE=4 SV=1) HSP 1 Score: 578 bits (1489), Expect = 4.11e-205 Identity = 267/277 (96.39%), Postives = 273/277 (98.56%), Query Frame = 0
BLAST of Cucsat.G8884.T10 vs. ExPASy TrEMBL
Match: A0A5D3DXA7 (APO protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G003310 PE=4 SV=1) HSP 1 Score: 578 bits (1489), Expect = 4.41e-205 Identity = 267/277 (96.39%), Postives = 273/277 (98.56%), Query Frame = 0
BLAST of Cucsat.G8884.T10 vs. ExPASy TrEMBL
Match: A0A6J1C0M4 (APO protein 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111006980 PE=4 SV=1) HSP 1 Score: 550 bits (1417), Expect = 1.23e-194 Identity = 257/277 (92.78%), Postives = 264/277 (95.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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