Cucsat.G8884.T10 (mRNA) Cucumber (B10) v3

Overview
NameCucsat.G8884.T10
TypemRNA
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionAPO protein 1, chloroplastic
Locationctg1635: 1276586 .. 1279996 (-)
RNA-Seq ExpressionCucsat.G8884.T10
SyntenyCucsat.G8884.T10
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGATGAATGTAGTTTTACTGGCTCACACTTTCGGTTCTTTTCACCCTCCTTTTGTTATAATACATTTGAAAAAAATAATTAAAAAAAAGCGTCCATTTAAAAATTTTCGCAGCCTCCACATTTCTCAGATTATTTTTCGCTCCACCTCTGCTCCGGCGGTAACAACCACTCCTTCTTCAACTTCATAGTTTATCTTCTTCAAATTTCTCTAATTGAAGCACTTAAATCTTTGATTTGTTCGAAATTATTGTTATATAATACCTTAGCTCTCAATTTCTCCATCGTTTTTGTTTCTGGTAATTTGAAGTTTGCTATACATCGTCGTTGTAGTTGTAACTACCATGCTTCCTGTTTTTTCGGTTCTGTTGGGACTGATATATGTTTGGTTTCTTTTTCAAGGCAACAAGGCAGCTAGAGAATCGGTGACTTGATGCTCCAGATACTTCCGGCGGTTTCTACTTGTTCTTGGGACCCATCTCAAATGGGTAGGTTTGTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTTATTTTTTGTATTGATACCTAAATTTGTAATCTCTGGGAGGAATTGAAAGGACGAGGACAATAGATGATAACTCACCATTCATATCGGTGTGGTGCTTGGTCACCATCACTCATTGGATTGGATCAAGTCAGCATTCGTTTAGAGAGCTAAAGAGTAGAGCATACCTCAAATATCGTTACCTCTCATGATTGTCTAGAAATAGGTTTTGTAACTGTCATTTGCTCATTAACTTTCCGAGTCATTAAGGAGGGTCGGTCTCCCTACACTAAGTGAAATTTACTTATGGCTACATGAACAACCCTATAGGTAGGTTTCTATATTTTGACAGATTAACTTATGACTTCATGGCTGACTCCATAGGTTGATCTCTTCCAAATTAAGCTCTTCTATTGGAATGATCCATTGGGAATTTGGTCGTCCGAGCTAACTATTTAGTCATACTTCTTACCCACAGCATTTTGAATTATAGAAAGAGTGTCCTTCATTGCTCCATTGTTGTTCACTAATTGGAGGCGTTGTTCATCCATAACTGCGTAGTAGCTACTGCCATTTGATTCCAATTGAAGTCTGAAAGATGTTTTGTTGTTGAACAATGGCTTGAGCTTATATCGGACTGATTTTATTGAATGTTTTAGGTATCCTCATTGGTAATGTGGAGTTTACAAGCCGGCACCTTTCTGCACTTGGATCATATACTCTTCGACCGAAGGTTCAAATGCTTATCCAAATCATCTCTACGAAATTTCAGTACTCTCTTGCTTGATTTTCTCTTGATTCTAGTGATCCTGTTGATGAAATGACATGCCTGGCTATGGATTTTGGATCATTTACCAAGACATGTTTATATTACCAGATCATATCTTGGTTTGTAATCCTACTTCGAAATCATTACCCTTCCAAATGGTTAAAACATGAATACTCTCAGTTTAAGTAAAATGATGTTTCTGTTACATCTTGTATTTGTATCTCAGATTTTGAGGGCATCCTTCTATGCGAGTCACTATCTCACTTTATTCTTGAAGATAATTACTATTGATTTTTAATGGTTCTCCTACTTCCTATGAGAAACTCTGAGAGAAATAAGATCTTGCAATATTCTTCTATTGCAGTTTGCGCATAAACTGTTGTCTCAAAAAGTGCCAACAGCATTAAGGACTTTATCCTATACCAGTCAGGAATATGGAAAAGAACCTGTTTCGAAGAAACAAGACATGTATCGCCAGAATGTGGATCTTCCAGCCATATTGCCTAAAAAGAAAAAGAAACCTTATCCTATTCCCATAAAGCAAATAAAGCGGGCTGCGAGAGCTGACAAAGAGCTTGCACAAAGGGGTATAGAGAAACCACTTGAACCTGGGAAAAATGGTTTACTTGTACCTGATTTGATACCTGTTGCTCATCAAGTAATGGATGCTTGGAAAATTTTGATTAAGGGCCTTTCACATCTTTTACATGTTATTCCAGTATATGCTTGCAGGTTGTTCTTTTCTGGTCAAGAAGTTTTAATATGAAATATTTTTAGCGAGCTCGTTTGGCTCTGTCCTTCTAGTCTTTCAGCATGCTAAATTTAAAATCCATAGTTATGCTGAATAGCAAATGTCTTTTGATTCTGTGTAGGGAATGTTCAGAAGTTCATGTAGCCCATTCAGGCCACCATATTCAAGATTGTCTTGGTGCTACCAGTGCAACGCGTCGAAGCTTCCACTCATGGGTCACAGGTTCTATTAATGATGTCTTAGTCCCTATTGAGTCATACCATCTTTATGATCCTTTTGGCCGGCGCATTAAGCATGAAACACGATTCGAATATGATAGAATTCCAGCTGTTGTAGAGCTCTGCATCCAGGCCGGTGTGGATATACCGGAGTATCCTTCACGTAGAAGAACTAAACCCATCCAAATGATTGGAAAGAAGGTAATTGATCGAGGTGGAAATATGGAGGAGCCTAAACCTTGGAAATCTTGTGATTCTTACCCTCTTCTTGATTTCGATACACAAGGGGCTCCTCAACGATTTGCACCTCCTCTACCTGAAGATGTCCCTAGAATTGCTCAAGAAACAATCGCAGCATATGAAACTGTTAGGTATGGTGTAAGGATGTTGATGAAGAAGTATACAGTGAAGGCTTGTGGGTACTGCCCTGAGGTTCATGTAGGACCATGGGGTCATAATGCTAAACTATGTGGAGAATTTAAGCACCAGTGGAGGGATGGAAAGCATGGTTGGCAGGATGCAACTTTAGACGAAGTACTGCCTCGCAATTATGTTTGGCATGTCCGTGATCCAAAAGGTCCGCCATTGATTGGTACATTGAAGAGGTTTTATGGTAAAGCTCCTGCTGTAGTTGAAGTGTGTATTCAGGCAGGCGCAACGATCCCCAAGAAATACTTGCCAATGATGAGGCTAGACATAGTCCTTCCTGATAGCGAGGAGGCGCGATCTGTTGCATAATTGCGTTGGCCAAAGTCATGGCGATTTCATCTGCACAGGTCTGTCCCAAGACCTCTATTCTTATCTTCGAGTTTCTGAAGAGATAAATTTTAAACATCAACAGTTGATGGAACTACAGCTTAGATGCTACATTAAGAGCAGTTAGAAAAGTGAGGATATCAGATGTATATTAAGGTTTGACTAGATTTCCTTGTTACAGTGTCTTCCTTGATCCCCTTGTTTGTATAGTTAAGATTTCCTGACCTTCAACCATTTGAATACTTGATAGATGCCGCTTTAACTTGTTGATTGACTTCGAGATCTATAATTGTGAAATTCAGAATGAAAATATGAAGTAGAAGGAGCCTCTTACAGTTATGTTGTATGTTGTGACGAGTCTTGAAATTGGAAATTTGTAATGTCAGCAAAGGATATTGACAAGTAAAA

Coding sequence (CDS)

ATGACATGCCTGGCTATGGATTTTGGATCATTTACCAAGACATGTTTATATTACCAGATCATATCTTGGGAATGTTCAGAAGTTCATGTAGCCCATTCAGGCCACCATATTCAAGATTGTCTTGGTGCTACCAGTGCAACGCGTCGAAGCTTCCACTCATGGGTCACAGGTTCTATTAATGATGTCTTAGTCCCTATTGAGTCATACCATCTTTATGATCCTTTTGGCCGGCGCATTAAGCATGAAACACGATTCGAATATGATAGAATTCCAGCTGTTGTAGAGCTCTGCATCCAGGCCGGTGTGGATATACCGGAGTATCCTTCACGTAGAAGAACTAAACCCATCCAAATGATTGGAAAGAAGGTAATTGATCGAGGTGGAAATATGGAGGAGCCTAAACCTTGGAAATCTTGTGATTCTTACCCTCTTCTTGATTTCGATACACAAGGGGCTCCTCAACGATTTGCACCTCCTCTACCTGAAGATGTCCCTAGAATTGCTCAAGAAACAATCGCAGCATATGAAACTGTTAGGTATGGTGTAAGGATGTTGATGAAGAAGTATACAGTGAAGGCTTGTGGGTACTGCCCTGAGGTTCATGTAGGACCATGGGGTCATAATGCTAAACTATGTGGAGAATTTAAGCACCAGTGGAGGGATGGAAAGCATGGTTGGCAGGATGCAACTTTAGACGAAGTACTGCCTCGCAATTATGTTTGGCATGTCCGTGATCCAAAAGGTCCGCCATTGATTGGTACATTGAAGAGGTTTTATGGTAAAGCTCCTGCTGTAGTTGAAGTGTGTATTCAGGCAGGCGCAACGATCCCCAAGAAATACTTGCCAATGATGAGGCTAGACATAGTCCTTCCTGATAGCGAGGAGGCGCGATCTGTTGCATAA

Protein sequence

MTCLAMDFGSFTKTCLYYQIISWECSEVHVAHSGHHIQDCLGATSATRRSFHSWVTGSINDVLVPIESYHLYDPFGRRIKHETRFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPIQMIGKKVIDRGGNMEEPKPWKSCDSYPLLDFDTQGAPQRFAPPLPEDVPRIAQETIAAYETVRYGVRMLMKKYTVKACGYCPEVHVGPWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYGKAPAVVEVCIQAGATIPKKYLPMMRLDIVLPDSEEARSVA
Homology
BLAST of Cucsat.G8884.T10 vs. ExPASy Swiss-Prot
Match: Q9XIR4 (APO protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APO1 PE=2 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 6.4e-120
Identity = 195/279 (69.89%), Postives = 233/279 (83.51%), Query Frame = 0

Query: 24  ECSEVHVAHSGHHIQDCLGATSATRRSFHSWVTGSINDVLVPIESYHLYDPFGRRIKHET 83
           EC  VHVA+ GH+I+DC G T++ RR  HSWV G+INDVL+P+ESYH+YDPFGRRIKHET
Sbjct: 158 ECGAVHVANVGHNIRDCNGPTNSQRRGSHSWVKGTINDVLIPVESYHMYDPFGRRIKHET 217

Query: 84  RFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPIQMIGKKVIDRGGNMEEP-KPWKSCD-S 143
           RFEY+RIPA+VELCIQAGV+IPEYP RRRT+PI+M+GK+VIDRGG  +EP KP  S   S
Sbjct: 218 RFEYERIPALVELCIQAGVEIPEYPCRRRTQPIRMMGKRVIDRGGYHKEPEKPQTSSSLS 277

Query: 144 YPLLDFDTQGAPQRFAPPLPEDVPRIAQETIAAYETVRYGVRMLMKKYTVKACGYCPEVH 203
            PL + DT G  +R+ PP PED+P+IAQET+ AYE VR GV  LM+K+TVKACGYC EVH
Sbjct: 278 SPLAELDTLGVFERYPPPTPEDIPKIAQETMDAYEKVRLGVTKLMRKFTVKACGYCSEVH 337

Query: 204 VGPWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYGK 263
           VGPWGH+ KLCGEFKHQWRDGKHGWQDA +DEV P NYVWHVRD KG PL G L+RFYGK
Sbjct: 338 VGPWGHSVKLCGEFKHQWRDGKHGWQDALVDEVFPPNYVWHVRDLKGNPLTGNLRRFYGK 397

Query: 264 APAVVEVCIQAGATIPKKYLPMMRLDIVLPDSEEARSVA 301
           APA+VE+C+ +GA +P++Y  MMRLDI++PDS+EA  VA
Sbjct: 398 APALVEICMHSGARVPQRYKAMMRLDIIVPDSQEADMVA 436

BLAST of Cucsat.G8884.T10 vs. ExPASy Swiss-Prot
Match: Q8W4A5 (APO protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APO2 PE=2 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 2.7e-78
Identity = 136/277 (49.10%), Postives = 180/277 (64.98%), Query Frame = 0

Query: 25  CSEVHVAHSGHHIQDCLGATSATRRSFHSWVTGSINDVLVPIESYHLYDPFGRRIKHETR 84
           C+E+HV   GH  + C G  ++ R+  H W    I DV+VP+E+YHL+D  G+RI+H+ R
Sbjct: 166 CNEIHVGPYGHPFKSCKGPNTSQRKGLHEWTNSVIEDVIVPLEAYHLFDRLGKRIRHDER 225

Query: 85  FEYDRIPAVVELCIQAGVDIPEYPSRRRTKPIQMIGKKVIDRGGNMEEPKPWKSCDSYPL 144
           F   R+PAVVELCIQ GV+IPE+P++RR KPI  IGK         E P P       PL
Sbjct: 226 FSIPRVPAVVELCIQGGVEIPEFPAKRRRKPIIRIGKSEFVDADETELPDPEPQPPPVPL 285

Query: 145 LDFDTQGAPQRFAPP-LPEDVPRIAQETIAAYETVRYGVRMLMKKYTVKACGYCPEVHVG 204
           L   T+       PP   E+   +A+ET+ A+E +R G + LM+ Y V+ CGYCPEVHVG
Sbjct: 286 L---TELPVSEITPPSSEEETVSLAEETLQAWEEMRAGAKKLMRMYRVRVCGYCPEVHVG 345

Query: 205 PWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYGKAP 264
           P GH A+ CG FKHQ R+G+HGWQ A LD+++P  YVWHV D  GPP+   L+ FYG+AP
Sbjct: 346 PTGHKAQNCGAFKHQQRNGQHGWQSAVLDDLIPPRYVWHVPDVNGPPMQRELRSFYGQAP 405

Query: 265 AVVEVCIQAGATIPKKYLPMMRLDIVLPDS-EEARSV 300
           AVVE+C QAGA +P+ Y   MRL++ +P S +EA  V
Sbjct: 406 AVVEICAQAGAVVPEHYRATMRLEVGIPSSVKEAEMV 439

BLAST of Cucsat.G8884.T10 vs. ExPASy Swiss-Prot
Match: Q9FH50 (APO protein 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=APO3 PE=2 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 2.9e-64
Identity = 118/278 (42.45%), Postives = 174/278 (62.59%), Query Frame = 0

Query: 25  CSEVHVAHSGHHIQDCLGATSATRRSFHSWVTGSINDVLVPIESYHLYDPFGR-RIKHET 84
           C+EVH+   GH I+ C G  S +R + H W  G ++DV++  + +HLYD   + R+ H+ 
Sbjct: 131 CAEVHIGKQGHEIRTCTGPGSGSRSATHVWKRGRVSDVVLFPKCFHLYDRAVKPRVIHDE 190

Query: 85  RFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPIQMIGKKVIDRGGNMEEPKPWKSCDSYP 144
           RF   +I AV+ELCIQAGVD+ ++PS+RR+KP+  I  +++D     +         +  
Sbjct: 191 RFTVPKISAVLELCIQAGVDLEKFPSKRRSKPVYSIEGRIVDFEDVNDGNSELAVTSTTT 250

Query: 145 LLDFDTQGAPQRFAPPLPEDVPRIAQETIAAYETVRYGVRMLMKKYTVKACGYCPEVHVG 204
           L+  D +   ++      + +  ++ ET+ ++  +  GVR LM++Y V  CGYCPE+ VG
Sbjct: 251 LIQEDDRCKEEK------KSLKELSFETMESWFEMVLGVRKLMERYRVWTCGYCPEIQVG 310

Query: 205 PWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDP-KGPPLIGTLKRFYGKA 264
           P GH  ++C   KHQ RDG H WQ+AT+D+V+   YVWHVRDP  G  L  +LKRFYGKA
Sbjct: 311 PKGHKVRMCKATKHQMRDGMHAWQEATIDDVVGPTYVWHVRDPTDGSVLDNSLKRFYGKA 370

Query: 265 PAVVEVCIQAGATIPKKYLPMMRLDIVLPDSEEARSVA 301
           PAV+E+C+Q GA +P +Y  MMRLD+V P  +E   VA
Sbjct: 371 PAVIEMCVQGGAPVPDQYNSMMRLDVVYPQRDEVDLVA 402

BLAST of Cucsat.G8884.T10 vs. ExPASy Swiss-Prot
Match: Q9LSZ0 (APO protein 4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=APO4 PE=2 SV=2)

HSP 1 Score: 181.4 bits (459), Expect = 1.5e-44
Identity = 94/261 (36.02%), Postives = 135/261 (51.72%), Query Frame = 0

Query: 25  CSEVHVAHSGHHIQDCLGATSATRRSFHSWVTGSINDVLVPIESYHLYDPFGRRIKHETR 84
           CSEV V   GH I+ C           H WV GSIND+LVP+ESYHL++     I+H+ R
Sbjct: 91  CSEVFVGKEGHLIETCRSYIRRGNNRLHEWVPGSINDILVPVESYHLHNISQGVIRHQER 150

Query: 85  FEYDRIPAVVELCIQAGVDIPEYPSRRRTKPIQMIGKKVIDRGGNMEEPKPWKSCDSYPL 144
           F+YDR+PA++ELC QAG   PE               +++      + P+         +
Sbjct: 151 FDYDRVPAILELCCQAGAIHPE---------------EILQYSEIHDNPQ---------I 210

Query: 145 LDFDTQGAPQRFAPPLPEDVPRIAQETIAAYETVRYGVRMLMKKYTVKACGYCPEVHVGP 204
            + D +  P         D+  +    + A+E VR GV+ L+  Y  K C  C EVHVGP
Sbjct: 211 SEEDIRSLP-------AGDLKYVGANALMAWEKVRAGVKKLLLVYPSKVCKRCKEVHVGP 270

Query: 205 WGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYGKAPA 264
            GH A+LCG FK++   G H W+ A +++++P   VWH R      L+   + +YG APA
Sbjct: 271 SGHKARLCGVFKYESWRGTHYWEKAGVNDLVPEKMVWHRRPQDPVVLVDEGRSYYGHAPA 320

Query: 265 VVEVCIQAGATIPKKYLPMMR 286
           +V +C   GA +P KY   M+
Sbjct: 331 IVSLCSHTGAIVPVKYACKMK 320

BLAST of Cucsat.G8884.T10 vs. NCBI nr
Match: XP_004149527.1 (APO protein 1, chloroplastic [Cucumis sativus] >KGN54971.1 hypothetical protein Csa_012644 [Cucumis sativus])

HSP 1 Score: 595 bits (1533), Expect = 5.62e-212
Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 0

Query: 24  ECSEVHVAHSGHHIQDCLGATSATRRSFHSWVTGSINDVLVPIESYHLYDPFGRRIKHET 83
           ECSEVHVAHSGHHIQDCLGATSATRRSFHSWVTGSINDVLVPIESYHLYDPFGRRIKHET
Sbjct: 167 ECSEVHVAHSGHHIQDCLGATSATRRSFHSWVTGSINDVLVPIESYHLYDPFGRRIKHET 226

Query: 84  RFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPIQMIGKKVIDRGGNMEEPKPWKSCDSYP 143
           RFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPIQMIGKKVIDRGGNMEEPKPWKSCDSYP
Sbjct: 227 RFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPIQMIGKKVIDRGGNMEEPKPWKSCDSYP 286

Query: 144 LLDFDTQGAPQRFAPPLPEDVPRIAQETIAAYETVRYGVRMLMKKYTVKACGYCPEVHVG 203
           LLDFDTQGAPQRFAPPLPEDVPRIAQETIAAYETVRYGVRMLMKKYTVKACGYCPEVHVG
Sbjct: 287 LLDFDTQGAPQRFAPPLPEDVPRIAQETIAAYETVRYGVRMLMKKYTVKACGYCPEVHVG 346

Query: 204 PWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYGKAP 263
           PWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYGKAP
Sbjct: 347 PWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYGKAP 406

Query: 264 AVVEVCIQAGATIPKKYLPMMRLDIVLPDSEEARSVA 300
           AVVEVCIQAGATIPKKYLPMMRLDIVLPDSEEARSVA
Sbjct: 407 AVVEVCIQAGATIPKKYLPMMRLDIVLPDSEEARSVA 443

BLAST of Cucsat.G8884.T10 vs. NCBI nr
Match: XP_008464665.1 (PREDICTED: APO protein 1, chloroplastic [Cucumis melo])

HSP 1 Score: 578 bits (1489), Expect = 2.80e-205
Identity = 267/277 (96.39%), Postives = 273/277 (98.56%), Query Frame = 0

Query: 24  ECSEVHVAHSGHHIQDCLGATSATRRSFHSWVTGSINDVLVPIESYHLYDPFGRRIKHET 83
           ECSEVHVAHSGHHIQDCLG+TSA RRSFHSWVTGSINDVLVPIESYHLYDPFGRRIKHET
Sbjct: 167 ECSEVHVAHSGHHIQDCLGSTSAMRRSFHSWVTGSINDVLVPIESYHLYDPFGRRIKHET 226

Query: 84  RFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPIQMIGKKVIDRGGNMEEPKPWKSCDSYP 143
           RFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPI+MIGKKVIDRGGNMEEPKPW+SC+SYP
Sbjct: 227 RFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPIRMIGKKVIDRGGNMEEPKPWQSCESYP 286

Query: 144 LLDFDTQGAPQRFAPPLPEDVPRIAQETIAAYETVRYGVRMLMKKYTVKACGYCPEVHVG 203
           LLDFDTQGA QRFAPPLP+DVPRIAQETI AYETVRYGVRMLMKKYTVKACGYCPEVHVG
Sbjct: 287 LLDFDTQGASQRFAPPLPDDVPRIAQETIEAYETVRYGVRMLMKKYTVKACGYCPEVHVG 346

Query: 204 PWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYGKAP 263
           PWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYGKAP
Sbjct: 347 PWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYGKAP 406

Query: 264 AVVEVCIQAGATIPKKYLPMMRLDIVLPDSEEARSVA 300
           AVVEVC+QAGATIPKKYLPMMRLDIVLPD EEARSVA
Sbjct: 407 AVVEVCMQAGATIPKKYLPMMRLDIVLPDGEEARSVA 443

BLAST of Cucsat.G8884.T10 vs. NCBI nr
Match: KAA0063366.1 (APO protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 578 bits (1489), Expect = 8.48e-205
Identity = 267/277 (96.39%), Postives = 273/277 (98.56%), Query Frame = 0

Query: 24  ECSEVHVAHSGHHIQDCLGATSATRRSFHSWVTGSINDVLVPIESYHLYDPFGRRIKHET 83
           ECSEVHVAHSGHHIQDCLG+TSA RRSFHSWVTGSINDVLVPIESYHLYDPFGRRIKHET
Sbjct: 198 ECSEVHVAHSGHHIQDCLGSTSAMRRSFHSWVTGSINDVLVPIESYHLYDPFGRRIKHET 257

Query: 84  RFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPIQMIGKKVIDRGGNMEEPKPWKSCDSYP 143
           RFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPI+MIGKKVIDRGGNMEEPKPW+SC+SYP
Sbjct: 258 RFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPIRMIGKKVIDRGGNMEEPKPWQSCESYP 317

Query: 144 LLDFDTQGAPQRFAPPLPEDVPRIAQETIAAYETVRYGVRMLMKKYTVKACGYCPEVHVG 203
           LLDFDTQGA QRFAPPLP+DVPRIAQETI AYETVRYGVRMLMKKYTVKACGYCPEVHVG
Sbjct: 318 LLDFDTQGASQRFAPPLPDDVPRIAQETIEAYETVRYGVRMLMKKYTVKACGYCPEVHVG 377

Query: 204 PWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYGKAP 263
           PWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYGKAP
Sbjct: 378 PWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYGKAP 437

Query: 264 AVVEVCIQAGATIPKKYLPMMRLDIVLPDSEEARSVA 300
           AVVEVC+QAGATIPKKYLPMMRLDIVLPD EEARSVA
Sbjct: 438 AVVEVCMQAGATIPKKYLPMMRLDIVLPDGEEARSVA 474

BLAST of Cucsat.G8884.T10 vs. NCBI nr
Match: TYK28069.1 (APO protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 578 bits (1489), Expect = 9.11e-205
Identity = 267/277 (96.39%), Postives = 273/277 (98.56%), Query Frame = 0

Query: 24  ECSEVHVAHSGHHIQDCLGATSATRRSFHSWVTGSINDVLVPIESYHLYDPFGRRIKHET 83
           ECSEVHVAHSGHHIQDCLG+TSA RRSFHSWVTGSINDVLVPIESYHLYDPFGRRIKHET
Sbjct: 200 ECSEVHVAHSGHHIQDCLGSTSAMRRSFHSWVTGSINDVLVPIESYHLYDPFGRRIKHET 259

Query: 84  RFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPIQMIGKKVIDRGGNMEEPKPWKSCDSYP 143
           RFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPI+MIGKKVIDRGGNMEEPKPW+SC+SYP
Sbjct: 260 RFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPIRMIGKKVIDRGGNMEEPKPWQSCESYP 319

Query: 144 LLDFDTQGAPQRFAPPLPEDVPRIAQETIAAYETVRYGVRMLMKKYTVKACGYCPEVHVG 203
           LLDFDTQGA QRFAPPLP+DVPRIAQETI AYETVRYGVRMLMKKYTVKACGYCPEVHVG
Sbjct: 320 LLDFDTQGASQRFAPPLPDDVPRIAQETIEAYETVRYGVRMLMKKYTVKACGYCPEVHVG 379

Query: 204 PWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYGKAP 263
           PWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYGKAP
Sbjct: 380 PWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYGKAP 439

Query: 264 AVVEVCIQAGATIPKKYLPMMRLDIVLPDSEEARSVA 300
           AVVEVC+QAGATIPKKYLPMMRLDIVLPD EEARSVA
Sbjct: 440 AVVEVCMQAGATIPKKYLPMMRLDIVLPDGEEARSVA 476

BLAST of Cucsat.G8884.T10 vs. NCBI nr
Match: XP_038897981.1 (APO protein 1, chloroplastic [Benincasa hispida] >XP_038897983.1 APO protein 1, chloroplastic [Benincasa hispida] >XP_038897984.1 APO protein 1, chloroplastic [Benincasa hispida])

HSP 1 Score: 555 bits (1430), Expect = 2.67e-196
Identity = 258/277 (93.14%), Postives = 266/277 (96.03%), Query Frame = 0

Query: 24  ECSEVHVAHSGHHIQDCLGATSATRRSFHSWVTGSINDVLVPIESYHLYDPFGRRIKHET 83
           ECSEVHVAHSGHHIQDCLG TSA RRSFHSWVTGSINDVLVPIESYHLYDPFGRRIKHET
Sbjct: 167 ECSEVHVAHSGHHIQDCLGPTSAMRRSFHSWVTGSINDVLVPIESYHLYDPFGRRIKHET 226

Query: 84  RFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPIQMIGKKVIDRGGNMEEPKPWKSCDSYP 143
           RFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPI+MIGKKVIDRGGN+EEPKPW++ DSYP
Sbjct: 227 RFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPIRMIGKKVIDRGGNIEEPKPWQAADSYP 286

Query: 144 LLDFDTQGAPQRFAPPLPEDVPRIAQETIAAYETVRYGVRMLMKKYTVKACGYCPEVHVG 203
           LLDFDTQ A QRFAPPLPEDVPRIAQET+ AYETVRYGVR LM+KYTVKACGYC EVHVG
Sbjct: 287 LLDFDTQRASQRFAPPLPEDVPRIAQETMEAYETVRYGVRRLMRKYTVKACGYCSEVHVG 346

Query: 204 PWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYGKAP 263
           PWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLP NYVWHVRDPKGP LIG LKRFYGKAP
Sbjct: 347 PWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPPNYVWHVRDPKGPTLIGALKRFYGKAP 406

Query: 264 AVVEVCIQAGATIPKKYLPMMRLDIVLPDSEEARSVA 300
           AVVEVC+QAGATIP+KYLPMMRLDIVLPDSEEARSVA
Sbjct: 407 AVVEVCMQAGATIPEKYLPMMRLDIVLPDSEEARSVA 443

BLAST of Cucsat.G8884.T10 vs. ExPASy TrEMBL
Match: A0A0A0L4B9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G617380 PE=4 SV=1)

HSP 1 Score: 595 bits (1533), Expect = 2.72e-212
Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 0

Query: 24  ECSEVHVAHSGHHIQDCLGATSATRRSFHSWVTGSINDVLVPIESYHLYDPFGRRIKHET 83
           ECSEVHVAHSGHHIQDCLGATSATRRSFHSWVTGSINDVLVPIESYHLYDPFGRRIKHET
Sbjct: 167 ECSEVHVAHSGHHIQDCLGATSATRRSFHSWVTGSINDVLVPIESYHLYDPFGRRIKHET 226

Query: 84  RFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPIQMIGKKVIDRGGNMEEPKPWKSCDSYP 143
           RFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPIQMIGKKVIDRGGNMEEPKPWKSCDSYP
Sbjct: 227 RFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPIQMIGKKVIDRGGNMEEPKPWKSCDSYP 286

Query: 144 LLDFDTQGAPQRFAPPLPEDVPRIAQETIAAYETVRYGVRMLMKKYTVKACGYCPEVHVG 203
           LLDFDTQGAPQRFAPPLPEDVPRIAQETIAAYETVRYGVRMLMKKYTVKACGYCPEVHVG
Sbjct: 287 LLDFDTQGAPQRFAPPLPEDVPRIAQETIAAYETVRYGVRMLMKKYTVKACGYCPEVHVG 346

Query: 204 PWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYGKAP 263
           PWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYGKAP
Sbjct: 347 PWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYGKAP 406

Query: 264 AVVEVCIQAGATIPKKYLPMMRLDIVLPDSEEARSVA 300
           AVVEVCIQAGATIPKKYLPMMRLDIVLPDSEEARSVA
Sbjct: 407 AVVEVCIQAGATIPKKYLPMMRLDIVLPDSEEARSVA 443

BLAST of Cucsat.G8884.T10 vs. ExPASy TrEMBL
Match: A0A1S3CM36 (APO protein 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502498 PE=4 SV=1)

HSP 1 Score: 578 bits (1489), Expect = 1.36e-205
Identity = 267/277 (96.39%), Postives = 273/277 (98.56%), Query Frame = 0

Query: 24  ECSEVHVAHSGHHIQDCLGATSATRRSFHSWVTGSINDVLVPIESYHLYDPFGRRIKHET 83
           ECSEVHVAHSGHHIQDCLG+TSA RRSFHSWVTGSINDVLVPIESYHLYDPFGRRIKHET
Sbjct: 167 ECSEVHVAHSGHHIQDCLGSTSAMRRSFHSWVTGSINDVLVPIESYHLYDPFGRRIKHET 226

Query: 84  RFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPIQMIGKKVIDRGGNMEEPKPWKSCDSYP 143
           RFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPI+MIGKKVIDRGGNMEEPKPW+SC+SYP
Sbjct: 227 RFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPIRMIGKKVIDRGGNMEEPKPWQSCESYP 286

Query: 144 LLDFDTQGAPQRFAPPLPEDVPRIAQETIAAYETVRYGVRMLMKKYTVKACGYCPEVHVG 203
           LLDFDTQGA QRFAPPLP+DVPRIAQETI AYETVRYGVRMLMKKYTVKACGYCPEVHVG
Sbjct: 287 LLDFDTQGASQRFAPPLPDDVPRIAQETIEAYETVRYGVRMLMKKYTVKACGYCPEVHVG 346

Query: 204 PWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYGKAP 263
           PWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYGKAP
Sbjct: 347 PWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYGKAP 406

Query: 264 AVVEVCIQAGATIPKKYLPMMRLDIVLPDSEEARSVA 300
           AVVEVC+QAGATIPKKYLPMMRLDIVLPD EEARSVA
Sbjct: 407 AVVEVCMQAGATIPKKYLPMMRLDIVLPDGEEARSVA 443

BLAST of Cucsat.G8884.T10 vs. ExPASy TrEMBL
Match: A0A5A7VAB0 (APO protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1505G00410 PE=4 SV=1)

HSP 1 Score: 578 bits (1489), Expect = 4.11e-205
Identity = 267/277 (96.39%), Postives = 273/277 (98.56%), Query Frame = 0

Query: 24  ECSEVHVAHSGHHIQDCLGATSATRRSFHSWVTGSINDVLVPIESYHLYDPFGRRIKHET 83
           ECSEVHVAHSGHHIQDCLG+TSA RRSFHSWVTGSINDVLVPIESYHLYDPFGRRIKHET
Sbjct: 198 ECSEVHVAHSGHHIQDCLGSTSAMRRSFHSWVTGSINDVLVPIESYHLYDPFGRRIKHET 257

Query: 84  RFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPIQMIGKKVIDRGGNMEEPKPWKSCDSYP 143
           RFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPI+MIGKKVIDRGGNMEEPKPW+SC+SYP
Sbjct: 258 RFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPIRMIGKKVIDRGGNMEEPKPWQSCESYP 317

Query: 144 LLDFDTQGAPQRFAPPLPEDVPRIAQETIAAYETVRYGVRMLMKKYTVKACGYCPEVHVG 203
           LLDFDTQGA QRFAPPLP+DVPRIAQETI AYETVRYGVRMLMKKYTVKACGYCPEVHVG
Sbjct: 318 LLDFDTQGASQRFAPPLPDDVPRIAQETIEAYETVRYGVRMLMKKYTVKACGYCPEVHVG 377

Query: 204 PWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYGKAP 263
           PWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYGKAP
Sbjct: 378 PWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYGKAP 437

Query: 264 AVVEVCIQAGATIPKKYLPMMRLDIVLPDSEEARSVA 300
           AVVEVC+QAGATIPKKYLPMMRLDIVLPD EEARSVA
Sbjct: 438 AVVEVCMQAGATIPKKYLPMMRLDIVLPDGEEARSVA 474

BLAST of Cucsat.G8884.T10 vs. ExPASy TrEMBL
Match: A0A5D3DXA7 (APO protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G003310 PE=4 SV=1)

HSP 1 Score: 578 bits (1489), Expect = 4.41e-205
Identity = 267/277 (96.39%), Postives = 273/277 (98.56%), Query Frame = 0

Query: 24  ECSEVHVAHSGHHIQDCLGATSATRRSFHSWVTGSINDVLVPIESYHLYDPFGRRIKHET 83
           ECSEVHVAHSGHHIQDCLG+TSA RRSFHSWVTGSINDVLVPIESYHLYDPFGRRIKHET
Sbjct: 200 ECSEVHVAHSGHHIQDCLGSTSAMRRSFHSWVTGSINDVLVPIESYHLYDPFGRRIKHET 259

Query: 84  RFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPIQMIGKKVIDRGGNMEEPKPWKSCDSYP 143
           RFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPI+MIGKKVIDRGGNMEEPKPW+SC+SYP
Sbjct: 260 RFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPIRMIGKKVIDRGGNMEEPKPWQSCESYP 319

Query: 144 LLDFDTQGAPQRFAPPLPEDVPRIAQETIAAYETVRYGVRMLMKKYTVKACGYCPEVHVG 203
           LLDFDTQGA QRFAPPLP+DVPRIAQETI AYETVRYGVRMLMKKYTVKACGYCPEVHVG
Sbjct: 320 LLDFDTQGASQRFAPPLPDDVPRIAQETIEAYETVRYGVRMLMKKYTVKACGYCPEVHVG 379

Query: 204 PWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYGKAP 263
           PWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYGKAP
Sbjct: 380 PWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYGKAP 439

Query: 264 AVVEVCIQAGATIPKKYLPMMRLDIVLPDSEEARSVA 300
           AVVEVC+QAGATIPKKYLPMMRLDIVLPD EEARSVA
Sbjct: 440 AVVEVCMQAGATIPKKYLPMMRLDIVLPDGEEARSVA 476

BLAST of Cucsat.G8884.T10 vs. ExPASy TrEMBL
Match: A0A6J1C0M4 (APO protein 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111006980 PE=4 SV=1)

HSP 1 Score: 550 bits (1417), Expect = 1.23e-194
Identity = 257/277 (92.78%), Postives = 264/277 (95.31%), Query Frame = 0

Query: 24  ECSEVHVAHSGHHIQDCLGATSATRRSFHSWVTGSINDVLVPIESYHLYDPFGRRIKHET 83
           ECSEVHVA SGH IQDCLG+TSA RRSFH WVTGSINDVLVPIESYHLYDPFGRRI HET
Sbjct: 167 ECSEVHVAQSGHRIQDCLGSTSAIRRSFHLWVTGSINDVLVPIESYHLYDPFGRRIMHET 226

Query: 84  RFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPIQMIGKKVIDRGGNMEEPKPWKSCDSYP 143
           RFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPI+MIGKKVIDRGGN+EEPKPWKS DSYP
Sbjct: 227 RFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPIRMIGKKVIDRGGNIEEPKPWKSVDSYP 286

Query: 144 LLDFDTQGAPQRFAPPLPEDVPRIAQETIAAYETVRYGVRMLMKKYTVKACGYCPEVHVG 203
           LLDFDTQGA QRFAPPLP DVPRIAQETI AYETVR GVRMLM+KYTVKACGYC E+HVG
Sbjct: 287 LLDFDTQGASQRFAPPLPLDVPRIAQETIEAYETVRSGVRMLMRKYTVKACGYCSEIHVG 346

Query: 204 PWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYGKAP 263
           PWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLP NYVWHVRDPKGPPL+GTLKRFYGKAP
Sbjct: 347 PWGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPPNYVWHVRDPKGPPLMGTLKRFYGKAP 406

Query: 264 AVVEVCIQAGATIPKKYLPMMRLDIVLPDSEEARSVA 300
           AVVEVC+QAGA IPKKYLPMMRLDIVLPDSEEARSVA
Sbjct: 407 AVVEVCMQAGAQIPKKYLPMMRLDIVLPDSEEARSVA 443

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9XIR46.4e-12069.89APO protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APO1 PE=2 SV=1[more]
Q8W4A52.7e-7849.10APO protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APO2 PE=2 SV=1[more]
Q9FH502.9e-6442.45APO protein 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=APO3 PE=2 SV=1[more]
Q9LSZ01.5e-4436.02APO protein 4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=APO4 PE=2 SV=2[more]
Match NameE-valueIdentityDescription
XP_004149527.15.62e-212100.00APO protein 1, chloroplastic [Cucumis sativus] >KGN54971.1 hypothetical protein ... [more]
XP_008464665.12.80e-20596.39PREDICTED: APO protein 1, chloroplastic [Cucumis melo][more]
KAA0063366.18.48e-20596.39APO protein 1 [Cucumis melo var. makuwa][more]
TYK28069.19.11e-20596.39APO protein 1 [Cucumis melo var. makuwa][more]
XP_038897981.12.67e-19693.14APO protein 1, chloroplastic [Benincasa hispida] >XP_038897983.1 APO protein 1, ... [more]
Match NameE-valueIdentityDescription
A0A0A0L4B92.72e-212100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G617380 PE=4 SV=1[more]
A0A1S3CM361.36e-20596.39APO protein 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502498 PE=4 SV=1[more]
A0A5A7VAB04.11e-20596.39APO protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1505G00410... [more]
A0A5D3DXA74.41e-20596.39APO protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G003310... [more]
A0A6J1C0M41.23e-19492.78APO protein 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111006980 PE=4... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023342APO domainPFAMPF05634APO_RNA-bindcoord: 24..125
e-value: 9.4E-56
score: 188.4
coord: 166..278
e-value: 3.6E-22
score: 78.8
IPR023342APO domainPROSITEPS51499APOcoord: 21..106
score: 27.048954
IPR023342APO domainPROSITEPS51499APOcoord: 193..278
score: 26.555983
NoneNo IPR availablePANTHERPTHR10388:SF53APO PROTEIN 1, CHLOROPLASTICcoord: 24..300
NoneNo IPR availablePANTHERPTHR10388EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1coord: 24..300

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsat.G8884Cucsat.G8884gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G8884.T10.E1Cucsat.G8884.T10.E1exon
Cucsat.G8884.T10.E2Cucsat.G8884.T10.E2exon
Cucsat.G8884.T10.E3Cucsat.G8884.T10.E3exon
Cucsat.G8884.T10.E4Cucsat.G8884.T10.E4exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G8884.T10.C2Cucsat.G8884.T10.C2CDS
Cucsat.G8884.T10.C1Cucsat.G8884.T10.C1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsat.G8884.T10Cucsat.G8884.T10-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003723 RNA binding