Cucsat.G6450 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G6450
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	glycolipid transfer protein 3-like
Location	ctg1449: 952949 .. 954835 (-)
RNA-Seq Expression	Cucsat.G6450
Synteny	Cucsat.G6450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAATAGCATAAAGCTTTCTCTCTTTTCCTCTCTATGTCTATTACTTACAATAAAATGGTGGTGTAAAATGCAGAGGTTGGAGAACATGTATGAGTCTGATCCTTCGATGTATTCCAATATGGTAGAAATTTTGAAGAAAGAGACAAATGAAGGAAATGCAAGGAAGCTTACCAGTTGTAGCAGAGCCTTTCTTTGGTTGACGAGGTAACTTTTTCATTCTTCAACTTGTTTCATAGATTTACGGTGGAAGTGTATTAAATTTACCTTTGCCCGTCAGCTTAAATTTTGGGTCAATTGGTGTTTTAACAAGTGTTTCTCCCTGCTAGCTGGTTCCTTCTCTGGCTTTTGTTGTGCTGTTCTCTGTTCTGTTTTTAGTAACTGTTTCATCATTCTCTGAGAAAGACCAGAAGATATCTGTTAAGTTCTATCCATTATTCTCTCTCTCTATCTCTCTCTCTCTCTCCCCTTTTCTATGGAGTTGTTGATTATATATTATAAATGAACATAAAATAACATTGATTGATTCTTTTATGAGTTTATTTAAGGTTAGGACTTAAGGAGTTAGGAAACGAATAAAGTAACTCAAAGCTGTGAGAATGATGACAAGCAAGATATGTATTATAATATGAATGAGAACAAGGAGGAAAACAAACCTAAAGTTCATAAAGAGACCAACTTTATTAAAAATTGCATCTGTATTTAATGATCATACTGACTTTTCATTCACCTGTGAAGAATAGAGAGAAAGACTTGATGATAACACTAATTATGGTGTTTTTACTTAGGTCACTGGATTTTACAGTGTCTTTATTACAAAAGTCAAAAGAAGAACCTAGGCTGAGCATGGAGCAAGCGGTTGAGGATGCTTACAACCTTACTCTAAAGCCATGGCATGGATGGATTTCATCTGCTGCTTTCAAAGTAATTATACTCTTTAAGTAATTCTACGTGTTTATCCCTATACCTGTTTCAAACAAGGATTAAATCTTGTGTATTGAAGCAGTTACAACGGGTCAAATTGACCCCTTTCTGCTTTATTTTACTTTACATCTAATCTGATGATCATAGTGGTTTAATATAAACAAAAATTAATATTATGGTTTGTGCAGATAGCTCTGAAACTTGTGCCAGATAGTGAAACCTTTGCTAATCTTCTAATGGCCAAAGACGAAAACAACGATGCCCTTGTGGAGGAAATAGACTCCTTCATTTCCCAACTCGCACCTTTTCTAGAAGATATCCATAATATTCTGGTAAACTCAAGTATTACTTTCAGCATTAGAACCAACTTAATCACGGTTTACCTACTGATCACGTTCATGGATTTCTTTTCCAGAGACTGTACAGGTTAGATCGCTTAAAGTCTGCATAAAGAAAGACCAATGGACAAAAGAAGAATAGTTTCCCAAGTTTTGAGTTCTCTTTGTTTCATTTACATTTTCTTATGTATAGAAAACATGTAAATACAACTGCCATAGGTAGCACAGGAAAGTTTCTTTTCCATCTAAACTTCCTGAAGGTATTTTATTCATACACTTCTCATCTTTCTGCTTCATACAGATATAACAGTTAGGCTTGTAATGTAACTGGTAGAATTACTACTTTACTACCGCACGTCAAGTCTGTAATCTTTAACTGTATAATATATGGTGTTTTCTGTTTGGTCAATGTCAACAAAACAATTATCT

Coding sequence (CDS)

AATAGCATAAAGCTTTCTCTCTTTTCCTCTCTATGTCTATTACTTACAATAAAATGGTGGTGTAAAATGCAGAGGTTGGAGAACATGTATGAGTCTGATCCTTCGATGTATTCCAATATGGTAGAAATTTTGAAGAAAGAGACAAATGAAGGAAATGCAAGGAAGCTTACCAGTTGTAGCAGAGCCTTTCTTTGGTTGACGAGGTCACTGGATTTTACAGTGTCTTTATTACAAAAGTCAAAAGAAGAACCTAGGCTGAGCATGGAGCAAGCGGTTGAGGATGCTTACAACCTTACTCTAAAGCCATGGCATGGATGGATTTCATCTGCTGCTTTCAAAATAGCTCTGAAACTTGTGCCAGATAGTGAAACCTTTGCTAATCTTCTAATGGCCAAAGACGAAAACAACGATGCCCTTGTGGAGGAAATAGACTCCTTCATTTCCCAACTCGCACCTTTTCTAGAAGATATCCATAATATTCTGAGACTGTACAGGTTAGATCGCTTAAAGTCTGCATAA

Protein sequence

NSIKLSLFSSLCLLLTIKWWCKMQRLENMYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFTVSLLQKSKEEPRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETFANLLMAKDENNDALVEEIDSFISQLAPFLEDIHNILRLYRLDRLKSA

Homology

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BLAST of Cucsat.G6450 vs. ExPASy Swiss-Prot
Match: Q9LU33 (Glycolipid transfer protein 3 OS=Arabidopsis thaliana OX=3702 GN=GLTP3 PE=2 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 1.2e-57
Identity = 120/222 (54.05%), Postives = 158/222 (71.17%), Query Frame = 0


Query: 1   MKRKR-------EVEKESEMRSSTAELSVLAKFKPVDHAAS-------SIPTNHFLSICN 60
           MKRKR       + +K +E+ S+  ELSVL+  K              ++P    LS CN
Sbjct: 1   MKRKRCEMEETTKKKKMTEIGSAIEELSVLSIAKTTIVTTEKEAINIINLPLKPLLSFCN 60

Query: 61  LILQFLDKVGPTMTVLRQDIYQNIQRLENMYESDPSMYSNMVEILKKETNEGNARKLTSC 120
           +I+Q LDK+GPTM VLR DI QNIQRLE M+ESDP +YSN+VEIL+KE  EG++RK  SC
Sbjct: 61  IIVQVLDKIGPTMAVLRHDIDQNIQRLEKMWESDPLVYSNLVEILRKEAKEGSSRKPKSC 120

Query: 121 SRAFLWLTRSLDFTVSLLQKSKEEPRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLV 180
           SRA LWLTR++DFT++LLQ+  ++   +MEQA+E+ YNLT+KPWHGWISSAAFK+ALKLV
Sbjct: 121 SRAALWLTRAMDFTLALLQRLVKDMSQNMEQAIEECYNLTIKPWHGWISSAAFKVALKLV 180

Query: 181 PDSETFANLLMAKDENNDALVEEIDSFISQLAPFLEDIHNIL 209
           P++ TF N+L AKDE +  + ++I S IS L P L  +H+IL
Sbjct: 181 PNNNTFINVLAAKDETHQMVQDDITSLISLLIPLLSQLHSIL 222

[Close]

BLAST of Cucsat.G6450 vs. ExPASy Swiss-Prot
Match: Q6NLQ3 (Glycolipid transfer protein 2 OS=Arabidopsis thaliana OX=3702 GN=GLTP2 PE=2 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 1.1e-53
Identity = 112/212 (52.83%), Postives = 148/212 (69.81%), Query Frame = 0


Query: 1   MKRKR---EVEKESEMRSSTAELSVLAKFKPVDHA-ASSIPTNHFLSICNLILQFLDKVG 60
           MKRKR   E +K++E++++  ELSV    KP D   A+ IP    LS C+LI+Q LDK+G
Sbjct: 1   MKRKRYEMEKKKKTEIQTAIEELSVFIVTKPADKTEATHIPLRPILSFCSLIIQVLDKIG 60

Query: 61  PTMTVLRQDIYQNIQRLENMYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRS 120
           PTM VLRQDI QNIQRLE  YE+D  +YSN+ EILKKE  EG ++ + SC RA  WLTR+
Sbjct: 61  PTMAVLRQDIDQNIQRLEKFYETDSCVYSNLAEILKKEKEEGTSKMVASCGRALFWLTRT 120

Query: 121 LDFTVSLLQKSKEEPRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETFANLL 180
           +DFT  LL+   +E    ME+ VE+ Y  TLKP HGWI+SAAFK+ LKLVPD++TF   +
Sbjct: 121 MDFTAGLLRLLSKEMSSKMEELVEECYMTTLKPHHGWIASAAFKVCLKLVPDNKTFMEAI 180

Query: 181 MAKDENNDALVEEIDSFISQLAPFLEDIHNIL 209
            A+DE+ D L E+ID+  S L P L++I+ +L
Sbjct: 181 GARDESYDTLREDIDTLSSLLTPILKEIYFVL 212

[Close]

BLAST of Cucsat.G6450 vs. ExPASy Swiss-Prot
Match: O22797 (Glycolipid transfer protein 1 OS=Arabidopsis thaliana OX=3702 GN=GLTP1 PE=2 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 2.7e-28
Identity = 67/188 (35.64%), Postives = 100/188 (53.19%), Query Frame = 0


Query: 23  LAKFKPVDHAASSIPTNHFLSICNLILQFLDKVGPTMTVLRQDIYQNIQRLENMYESDPS 82
           L   K V      + T  FL +C  IL  +DK G  MT+++ DI  NI RLE  Y SDP 
Sbjct: 10  LEGMKHVKSDQGEMLTKPFLELCKTILPVIDKFGAAMTLVKSDIGGNITRLEKNYLSDPD 69

Query: 83  MYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFTVSLLQKSKEEPRLSMEQAVEDA 142
            +  +   ++ E     A+  +SC+   LWLTR++DF V L +        SM QA  D+
Sbjct: 70  KFKYLYTFVQVEIESKIAKGSSSCTNGLLWLTRAMDFLVELFRNLVAHQDWSMPQACADS 129

Query: 143 YNLTLKPWHGWISSAAFKIALKLVPDSETFANLLMAKDENNDALVEEIDSFISQLAPFLE 202
           Y  TLK WHGW++S+ F +ALKL PD + F +++      +  +  +++ F ++  PFL 
Sbjct: 130 YQKTLKKWHGWLASSTFSMALKLAPDRKKFMDVI----SGSGNIQADMERFCAEFGPFLH 189

Query: 203 DIHNILVN 211
           D H  L +
Sbjct: 190 DNHKFLAS 193

[Close]

BLAST of Cucsat.G6450 vs. ExPASy Swiss-Prot
Match: D3ZY60 (Pleckstrin homology domain-containing family A member 8 OS=Rattus norvegicus OX=10116 GN=Plekha8 PE=1 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 5.2e-16
Identity = 52/172 (30.23%), Postives = 85/172 (49.42%), Query Frame = 0


Query: 34  SSIPTNHFLSICNLILQFLDKVGPTM-TVLRQDIYQNIQRLENMYESDPSMYSNMVEILK 93
           S IPT  FL+ C  ++  LDK+GPT+   ++ D+  NI+++   Y ++   ++ + +I+ 
Sbjct: 329 SGIPTEAFLASCYAVVPVLDKLGPTVFAPVKMDLVGNIKKVNQKYITNKEEFTTLQKIVL 388

Query: 94  KETNEGNARKLTSCSRAFLWLTRSLDFTVSLLQKSKEEPRLSMEQAVEDAYNLTLKPWHG 153
            E     AR   S + A LWL R L F    L + K   +  ++ A+ +AY  TL+  HG
Sbjct: 389 HEVEADVARVRNSATEALLWLKRGLKFLKGFLTEVKNGEK-DIQTALNNAYGKTLRQHHG 448

Query: 154 WISSAAFKIALKLVPDSETFANLLMAK--DENNDALVEEIDSFISQLAPFLE 203
           W+    F +AL+  P  E F   L  K  D   +A    +   +S   P +E
Sbjct: 449 WVVRGVFALALRAAPSYEDFVAALTIKEGDHQKEAFSAGMQRDLSLYLPAME 499

[Close]

BLAST of Cucsat.G6450 vs. ExPASy Swiss-Prot
Match: O95397 (Putative protein PLEKHA9 OS=Homo sapiens OX=9606 GN=PLEKHA8P1 PE=5 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 8.9e-16
Identity = 46/148 (31.08%), Postives = 78/148 (52.70%), Query Frame = 0


Query: 34  SSIPTNHFLSICNLILQFLDKVGPTM-TVLRQDIYQNIQRLENMYESDPSMYSNMVEILK 93
           S IPT  FL+ C  ++  LDK+GPT+   ++ D+ +NI+++   Y ++   ++ + +I+ 
Sbjct: 212 SGIPTEAFLASCCAVVPVLDKLGPTVFAPVKMDLVENIKKVNQKYITNKEEFTTLQKIVL 271

Query: 94  KETNEGNARKLTSCSRAFLWLTRSLDFTVSLLQKSKEEPRLSMEQAVEDAYNLTLKPWHG 153
            E     A+   S + A LWL R L F    L + K   +  ++ A+ +AY  TL+  HG
Sbjct: 272 HEVEADVAQVRNSATEALLWLKRGLKFLKGFLTEVKNGEK-DIQTALNNAYGKTLRQHHG 331

Query: 154 WISSAAFKIALKLVPDSETFANLLMAKD 181
           W+    F +AL+  P  E F   L  K+
Sbjct: 332 WVVRGVFALALRATPSYEDFVAALTVKE 358

[Close]

BLAST of Cucsat.G6450 vs. NCBI nr
Match: XP_031743313.1 (glycolipid transfer protein 3 isoform X1 [Cucumis sativus])

HSP 1 Score: 464 bits (1194), Expect = 1.37e-164
Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 0


Query: 1   MKRKREVEKESEMRSSTAELSVLAKFKPVDHAASSIPTNHFLSICNLILQFLDKVGPTMT 60
           MKRKREVEKESEMRSSTAELSVLAKFKPVDHAASSIPTNHFLSICNLILQFLDKVGPTMT
Sbjct: 1   MKRKREVEKESEMRSSTAELSVLAKFKPVDHAASSIPTNHFLSICNLILQFLDKVGPTMT 60

Query: 61  VLRQDIYQNIQRLENMYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFT 120
           VLRQDIYQNIQRLENMYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFT
Sbjct: 61  VLRQDIYQNIQRLENMYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFT 120

Query: 121 VSLLQKSKEEPRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETFANLLMAKD 180
           VSLLQKSKEEPRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETFANLLMAKD
Sbjct: 121 VSLLQKSKEEPRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETFANLLMAKD 180

Query: 181 ENNDALVEEIDSFISQLAPFLEDIHNILVNSSITFSIRTNLITVYLLITFMDFFSRDCTG 240
           ENNDALVEEIDSFISQLAPFLEDIHNILVNSSITFSIRTNLITVYLLITFMDFFSRDCTG
Sbjct: 181 ENNDALVEEIDSFISQLAPFLEDIHNILVNSSITFSIRTNLITVYLLITFMDFFSRDCTG 240

[Close]

BLAST of Cucsat.G6450 vs. NCBI nr
Match: XP_038885263.1 (glycolipid transfer protein 3-like isoform X1 [Benincasa hispida])

HSP 1 Score: 417 bits (1072), Expect = 5.58e-146
Identity = 218/241 (90.46%), Postives = 227/241 (94.19%), Query Frame = 0


Query: 1   MKRKREVEKESEMRSSTAELSVLAKFKPVDHAASSIPTNHFLSICNLILQFLDKVGPTMT 60
           MKRKREVEKESEMR++TAELSVLAKFKPVD+AAS IPTN FLSICNLILQFLDKVGPTMT
Sbjct: 1   MKRKREVEKESEMRAATAELSVLAKFKPVDYAASDIPTNQFLSICNLILQFLDKVGPTMT 60

Query: 61  VLRQDIYQNIQRLENMYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFT 120
           VLRQDIYQNIQRLE MYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFT
Sbjct: 61  VLRQDIYQNIQRLETMYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFT 120

Query: 121 VSLLQKSKEEPRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETFANLLMAKD 180
           VSLLQKSKEEPRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETFANLLMAKD
Sbjct: 121 VSLLQKSKEEPRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETFANLLMAKD 180

Query: 181 ENNDALVEEIDSFISQLAPFLEDIHNILVNSSITFSIRTNLITVYLL-ITFMDFFSRDCT 240
           E +D LVEEIDSF+SQL+PFLEDIHNILVN+SITFSIRT  +TVYLL  +   FF R CT
Sbjct: 181 EKSDTLVEEIDSFVSQLSPFLEDIHNILVNTSITFSIRTTSMTVYLLSCSCFFFFPRHCT 240

[Close]

BLAST of Cucsat.G6450 vs. NCBI nr
Match: XP_004148812.1 (glycolipid transfer protein 3 isoform X2 [Cucumis sativus] >KAE8647183.1 hypothetical protein Csa_018912 [Cucumis sativus])

HSP 1 Score: 404 bits (1039), Expect = 2.70e-141
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0


Query: 1   MKRKREVEKESEMRSSTAELSVLAKFKPVDHAASSIPTNHFLSICNLILQFLDKVGPTMT 60
           MKRKREVEKESEMRSSTAELSVLAKFKPVDHAASSIPTNHFLSICNLILQFLDKVGPTMT
Sbjct: 1   MKRKREVEKESEMRSSTAELSVLAKFKPVDHAASSIPTNHFLSICNLILQFLDKVGPTMT 60

Query: 61  VLRQDIYQNIQRLENMYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFT 120
           VLRQDIYQNIQRLENMYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFT
Sbjct: 61  VLRQDIYQNIQRLENMYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFT 120

Query: 121 VSLLQKSKEEPRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETFANLLMAKD 180
           VSLLQKSKEEPRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETFANLLMAKD
Sbjct: 121 VSLLQKSKEEPRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETFANLLMAKD 180

Query: 181 ENNDALVEEIDSFISQLAPFLEDIHNIL 208
           ENNDALVEEIDSFISQLAPFLEDIHNIL
Sbjct: 181 ENNDALVEEIDSFISQLAPFLEDIHNIL 208

[Close]

BLAST of Cucsat.G6450 vs. NCBI nr
Match: XP_008441542.1 (PREDICTED: glycolipid transfer protein 3-like [Cucumis melo])

HSP 1 Score: 397 bits (1019), Expect = 3.02e-138
Identity = 203/208 (97.60%), Postives = 206/208 (99.04%), Query Frame = 0


Query: 1   MKRKREVEKESEMRSSTAELSVLAKFKPVDHAASSIPTNHFLSICNLILQFLDKVGPTMT 60
           MKRKREVEKESEMRSSTAELSVLAKFKPVDHAAS+IPTNHFL+ICNLILQFLDKVGPTMT
Sbjct: 1   MKRKREVEKESEMRSSTAELSVLAKFKPVDHAASNIPTNHFLAICNLILQFLDKVGPTMT 60

Query: 61  VLRQDIYQNIQRLENMYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFT 120
           VLRQDIYQNIQRLE MYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFT
Sbjct: 61  VLRQDIYQNIQRLETMYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFT 120

Query: 121 VSLLQKSKEEPRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETFANLLMAKD 180
           VSLLQKSKEEPRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETF NLLMAKD
Sbjct: 121 VSLLQKSKEEPRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETFTNLLMAKD 180

Query: 181 ENNDALVEEIDSFISQLAPFLEDIHNIL 208
           ENNDALV+EIDSFISQLAPFLEDIHNIL
Sbjct: 181 ENNDALVKEIDSFISQLAPFLEDIHNIL 208

[Close]

BLAST of Cucsat.G6450 vs. NCBI nr
Match: XP_038885264.1 (glycolipid transfer protein 3-like isoform X2 [Benincasa hispida])

HSP 1 Score: 385 bits (990), Expect = 7.92e-134
Identity = 197/208 (94.71%), Postives = 203/208 (97.60%), Query Frame = 0


Query: 1   MKRKREVEKESEMRSSTAELSVLAKFKPVDHAASSIPTNHFLSICNLILQFLDKVGPTMT 60
           MKRKREVEKESEMR++TAELSVLAKFKPVD+AAS IPTN FLSICNLILQFLDKVGPTMT
Sbjct: 1   MKRKREVEKESEMRAATAELSVLAKFKPVDYAASDIPTNQFLSICNLILQFLDKVGPTMT 60

Query: 61  VLRQDIYQNIQRLENMYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFT 120
           VLRQDIYQNIQRLE MYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFT
Sbjct: 61  VLRQDIYQNIQRLETMYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFT 120

Query: 121 VSLLQKSKEEPRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETFANLLMAKD 180
           VSLLQKSKEEPRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETFANLLMAKD
Sbjct: 121 VSLLQKSKEEPRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETFANLLMAKD 180

Query: 181 ENNDALVEEIDSFISQLAPFLEDIHNIL 208
           E +D LVEEIDSF+SQL+PFLEDIHNIL
Sbjct: 181 EKSDTLVEEIDSFVSQLSPFLEDIHNIL 208

[Close]

BLAST of Cucsat.G6450 vs. ExPASy TrEMBL
Match: A0A1S3B383 (glycolipid transfer protein 3-like OS=Cucumis melo OX=3656 GN=LOC103485646 PE=4 SV=1)

HSP 1 Score: 397 bits (1019), Expect = 1.46e-138
Identity = 203/208 (97.60%), Postives = 206/208 (99.04%), Query Frame = 0


Query: 1   MKRKREVEKESEMRSSTAELSVLAKFKPVDHAASSIPTNHFLSICNLILQFLDKVGPTMT 60
           MKRKREVEKESEMRSSTAELSVLAKFKPVDHAAS+IPTNHFL+ICNLILQFLDKVGPTMT
Sbjct: 1   MKRKREVEKESEMRSSTAELSVLAKFKPVDHAASNIPTNHFLAICNLILQFLDKVGPTMT 60

Query: 61  VLRQDIYQNIQRLENMYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFT 120
           VLRQDIYQNIQRLE MYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFT
Sbjct: 61  VLRQDIYQNIQRLETMYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFT 120

Query: 121 VSLLQKSKEEPRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETFANLLMAKD 180
           VSLLQKSKEEPRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETF NLLMAKD
Sbjct: 121 VSLLQKSKEEPRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETFTNLLMAKD 180

Query: 181 ENNDALVEEIDSFISQLAPFLEDIHNIL 208
           ENNDALV+EIDSFISQLAPFLEDIHNIL
Sbjct: 181 ENNDALVKEIDSFISQLAPFLEDIHNIL 208

[Close]

BLAST of Cucsat.G6450 vs. ExPASy TrEMBL
Match: A0A5A7UUW0 (Glycolipid transfer protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold98G00710 PE=4 SV=1)

HSP 1 Score: 380 bits (977), Expect = 2.96e-132
Identity = 193/199 (96.98%), Postives = 196/199 (98.49%), Query Frame = 0


Query: 13  MRSSTAELSVLAKFKPVDHAASSIPTNHFLSICNLILQFLDKVGPTMTVLRQDIYQNIQR 72
           MRSSTAELSVLAKFKPVDHAAS+IPTNHFL+ICNLILQFLDKVGPTMTVLRQDIYQNIQR
Sbjct: 1   MRSSTAELSVLAKFKPVDHAASNIPTNHFLAICNLILQFLDKVGPTMTVLRQDIYQNIQR 60

Query: 73  LENMYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFTVSLLQKSKEEPR 132
           LE MYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFTVSLLQKSKEEPR
Sbjct: 61  LETMYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFTVSLLQKSKEEPR 120

Query: 133 LSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETFANLLMAKDENNDALVEEIDS 192
           LSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETF NLLMAKDENNDALV+EIDS
Sbjct: 121 LSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETFTNLLMAKDENNDALVKEIDS 180

Query: 193 FISQLAPFLEDIHNILVNS 211
           FISQLAPFLEDIHNILV S
Sbjct: 181 FISQLAPFLEDIHNILVRS 199

[Close]

BLAST of Cucsat.G6450 vs. ExPASy TrEMBL
Match: A0A6J1FGL0 (glycolipid transfer protein 3-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445490 PE=4 SV=1)

HSP 1 Score: 364 bits (935), Expect = 1.35e-125
Identity = 186/211 (88.15%), Postives = 200/211 (94.79%), Query Frame = 0


Query: 1   MKRKREVEKESEMRSSTAELSVLAKFKPVDHAASSIPTNHFLSICNLILQFLDKVGPTMT 60
           MKRKREVEKE EMRS+TAELSVLA+FKPVDHAAS IPT  FLS+CNLILQFLDKVGPTMT
Sbjct: 1   MKRKREVEKEPEMRSATAELSVLAQFKPVDHAASDIPTKPFLSVCNLILQFLDKVGPTMT 60

Query: 61  VLRQDIYQNIQRLENMYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFT 120
           VLRQDI+QNIQRLE++YESDPSMYSNMVEILKKETNEG+ RKLTSCSRAFLWLTRSLDF 
Sbjct: 61  VLRQDIHQNIQRLESIYESDPSMYSNMVEILKKETNEGSTRKLTSCSRAFLWLTRSLDFI 120

Query: 121 VSLLQKSKEEPRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETFANLLMAKD 180
           VSLLQK KEEPR+SMEQAVE+AY+LTLKPWHGWISSAAFKIALKLVPDSETFANLLMAKD
Sbjct: 121 VSLLQKLKEEPRMSMEQAVEEAYSLTLKPWHGWISSAAFKIALKLVPDSETFANLLMAKD 180

Query: 181 ENNDALVEEIDSFISQLAPFLEDIHNILVNS 211
           + ND L EEIDSFIS+L+PFLEDIH+ILV S
Sbjct: 181 KKNDTLSEEIDSFISRLSPFLEDIHSILVRS 211

[Close]

BLAST of Cucsat.G6450 vs. ExPASy TrEMBL
Match: A0A6J1FHG5 (glycolipid transfer protein 3-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111445490 PE=4 SV=1)

HSP 1 Score: 362 bits (928), Expect = 1.07e-124
Identity = 184/208 (88.46%), Postives = 198/208 (95.19%), Query Frame = 0


Query: 1   MKRKREVEKESEMRSSTAELSVLAKFKPVDHAASSIPTNHFLSICNLILQFLDKVGPTMT 60
           MKRKREVEKE EMRS+TAELSVLA+FKPVDHAAS IPT  FLS+CNLILQFLDKVGPTMT
Sbjct: 1   MKRKREVEKEPEMRSATAELSVLAQFKPVDHAASDIPTKPFLSVCNLILQFLDKVGPTMT 60

Query: 61  VLRQDIYQNIQRLENMYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFT 120
           VLRQDI+QNIQRLE++YESDPSMYSNMVEILKKETNEG+ RKLTSCSRAFLWLTRSLDF 
Sbjct: 61  VLRQDIHQNIQRLESIYESDPSMYSNMVEILKKETNEGSTRKLTSCSRAFLWLTRSLDFI 120

Query: 121 VSLLQKSKEEPRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETFANLLMAKD 180
           VSLLQK KEEPR+SMEQAVE+AY+LTLKPWHGWISSAAFKIALKLVPDSETFANLLMAKD
Sbjct: 121 VSLLQKLKEEPRMSMEQAVEEAYSLTLKPWHGWISSAAFKIALKLVPDSETFANLLMAKD 180

Query: 181 ENNDALVEEIDSFISQLAPFLEDIHNIL 208
           + ND L EEIDSFIS+L+PFLEDIH+IL
Sbjct: 181 KKNDTLSEEIDSFISRLSPFLEDIHSIL 208

[Close]

BLAST of Cucsat.G6450 vs. ExPASy TrEMBL
Match: A0A6J1JZV8 (glycolipid transfer protein 3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489777 PE=4 SV=1)

HSP 1 Score: 360 bits (923), Expect = 9.09e-124
Identity = 183/211 (86.73%), Postives = 199/211 (94.31%), Query Frame = 0


Query: 1   MKRKREVEKESEMRSSTAELSVLAKFKPVDHAASSIPTNHFLSICNLILQFLDKVGPTMT 60
           MKRKREVEKE EMRS+TAELSVL++FKPVDHAAS IPT  FLS+C+LILQFLDKVGPTMT
Sbjct: 1   MKRKREVEKEPEMRSATAELSVLSQFKPVDHAASDIPTKPFLSVCHLILQFLDKVGPTMT 60

Query: 61  VLRQDIYQNIQRLENMYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFT 120
           VLRQDI+QNIQRLE++YESDPSMYSNMVEILKKETNEG+ RKLTSCSRAFLWLTRSLDF 
Sbjct: 61  VLRQDIHQNIQRLESLYESDPSMYSNMVEILKKETNEGSTRKLTSCSRAFLWLTRSLDFI 120

Query: 121 VSLLQKSKEEPRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETFANLLMAKD 180
           VSLL K KEEPR+SMEQAVE+AY+LTLKPWHGWISSAAFKIALKLVPDSETFANLLMAKD
Sbjct: 121 VSLLHKLKEEPRMSMEQAVEEAYSLTLKPWHGWISSAAFKIALKLVPDSETFANLLMAKD 180

Query: 181 ENNDALVEEIDSFISQLAPFLEDIHNILVNS 211
           + ND L EEIDSFIS+L+PFLEDIH+ILV S
Sbjct: 181 KKNDTLSEEIDSFISRLSPFLEDIHSILVRS 211

[Close]

BLAST of Cucsat.G6450 vs. TAIR 10
Match: AT3G21260.3 (Glycolipid transfer protein (GLTP) family protein )

HSP 1 Score: 224.6 bits (571), Expect = 8.8e-59
Identity = 120/222 (54.05%), Postives = 158/222 (71.17%), Query Frame = 0


Query: 1   MKRKR-------EVEKESEMRSSTAELSVLAKFKPVDHAAS-------SIPTNHFLSICN 60
           MKRKR       + +K +E+ S+  ELSVL+  K              ++P    LS CN
Sbjct: 1   MKRKRCEMEETTKKKKMTEIGSAIEELSVLSIAKTTIVTTEKEAINIINLPLKPLLSFCN 60

Query: 61  LILQFLDKVGPTMTVLRQDIYQNIQRLENMYESDPSMYSNMVEILKKETNEGNARKLTSC 120
           +I+Q LDK+GPTM VLR DI QNIQRLE M+ESDP +YSN+VEIL+KE  EG++RK  SC
Sbjct: 61  IIVQVLDKIGPTMAVLRHDIDQNIQRLEKMWESDPLVYSNLVEILRKEAKEGSSRKPKSC 120

Query: 121 SRAFLWLTRSLDFTVSLLQKSKEEPRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLV 180
           SRA LWLTR++DFT++LLQ+  ++   +MEQA+E+ YNLT+KPWHGWISSAAFK+ALKLV
Sbjct: 121 SRAALWLTRAMDFTLALLQRLVKDMSQNMEQAIEECYNLTIKPWHGWISSAAFKVALKLV 180

Query: 181 PDSETFANLLMAKDENNDALVEEIDSFISQLAPFLEDIHNIL 209
           P++ TF N+L AKDE +  + ++I S IS L P L  +H+IL
Sbjct: 181 PNNNTFINVLAAKDETHQMVQDDITSLISLLIPLLSQLHSIL 222

[Close]

BLAST of Cucsat.G6450 vs. TAIR 10
Match: AT1G21360.1 (glycolipid transfer protein 2 )

HSP 1 Score: 211.5 bits (537), Expect = 7.7e-55
Identity = 112/212 (52.83%), Postives = 148/212 (69.81%), Query Frame = 0


Query: 1   MKRKR---EVEKESEMRSSTAELSVLAKFKPVDHA-ASSIPTNHFLSICNLILQFLDKVG 60
           MKRKR   E +K++E++++  ELSV    KP D   A+ IP    LS C+LI+Q LDK+G
Sbjct: 1   MKRKRYEMEKKKKTEIQTAIEELSVFIVTKPADKTEATHIPLRPILSFCSLIIQVLDKIG 60

Query: 61  PTMTVLRQDIYQNIQRLENMYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRS 120
           PTM VLRQDI QNIQRLE  YE+D  +YSN+ EILKKE  EG ++ + SC RA  WLTR+
Sbjct: 61  PTMAVLRQDIDQNIQRLEKFYETDSCVYSNLAEILKKEKEEGTSKMVASCGRALFWLTRT 120

Query: 121 LDFTVSLLQKSKEEPRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETFANLL 180
           +DFT  LL+   +E    ME+ VE+ Y  TLKP HGWI+SAAFK+ LKLVPD++TF   +
Sbjct: 121 MDFTAGLLRLLSKEMSSKMEELVEECYMTTLKPHHGWIASAAFKVCLKLVPDNKTFMEAI 180

Query: 181 MAKDENNDALVEEIDSFISQLAPFLEDIHNIL 209
            A+DE+ D L E+ID+  S L P L++I+ +L
Sbjct: 181 GARDESYDTLREDIDTLSSLLTPILKEIYFVL 212

[Close]

BLAST of Cucsat.G6450 vs. TAIR 10
Match: AT3G21260.2 (Glycolipid transfer protein (GLTP) family protein )

HSP 1 Score: 175.6 bits (444), Expect = 4.7e-44
Identity = 83/137 (60.58%), Postives = 110/137 (80.29%), Query Frame = 0


Query: 72  RLENMYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFTVSLLQKSKEEP 131
           RLE M+ESDP +YSN+VEIL+KE  EG++RK  SCSRA LWLTR++DFT++LLQ+  ++ 
Sbjct: 2   RLEKMWESDPLVYSNLVEILRKEAKEGSSRKPKSCSRAALWLTRAMDFTLALLQRLVKDM 61

Query: 132 RLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETFANLLMAKDENNDALVEEID 191
             +MEQA+E+ YNLT+KPWHGWISSAAFK+ALKLVP++ TF N+L AKDE +  + ++I 
Sbjct: 62  SQNMEQAIEECYNLTIKPWHGWISSAAFKVALKLVPNNNTFINVLAAKDETHQMVQDDIT 121

Query: 192 SFISQLAPFLEDIHNIL 209
           S IS L P L  +H+IL
Sbjct: 122 SLISLLIPLLSQLHSIL 138

[Close]

BLAST of Cucsat.G6450 vs. TAIR 10
Match: AT3G21260.1 (Glycolipid transfer protein (GLTP) family protein )

HSP 1 Score: 170.6 bits (431), Expect = 1.5e-42
Identity = 80/133 (60.15%), Postives = 107/133 (80.45%), Query Frame = 0


Query: 76  MYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFTVSLLQKSKEEPRLSM 135
           M+ESDP +YSN+VEIL+KE  EG++RK  SCSRA LWLTR++DFT++LLQ+  ++   +M
Sbjct: 1   MWESDPLVYSNLVEILRKEAKEGSSRKPKSCSRAALWLTRAMDFTLALLQRLVKDMSQNM 60

Query: 136 EQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETFANLLMAKDENNDALVEEIDSFIS 195
           EQA+E+ YNLT+KPWHGWISSAAFK+ALKLVP++ TF N+L AKDE +  + ++I S IS
Sbjct: 61  EQAIEECYNLTIKPWHGWISSAAFKVALKLVPNNNTFINVLAAKDETHQMVQDDITSLIS 120

Query: 196 QLAPFLEDIHNIL 209
            L P L  +H+IL
Sbjct: 121 LLIPLLSQLHSIL 133

[Close]

BLAST of Cucsat.G6450 vs. TAIR 10
Match: AT2G33470.1 (glycolipid transfer protein 1 )

HSP 1 Score: 127.1 bits (318), Expect = 1.9e-29
Identity = 67/188 (35.64%), Postives = 100/188 (53.19%), Query Frame = 0


Query: 23  LAKFKPVDHAASSIPTNHFLSICNLILQFLDKVGPTMTVLRQDIYQNIQRLENMYESDPS 82
           L   K V      + T  FL +C  IL  +DK G  MT+++ DI  NI RLE  Y SDP 
Sbjct: 10  LEGMKHVKSDQGEMLTKPFLELCKTILPVIDKFGAAMTLVKSDIGGNITRLEKNYLSDPD 69

Query: 83  MYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFTVSLLQKSKEEPRLSMEQAVEDA 142
            +  +   ++ E     A+  +SC+   LWLTR++DF V L +        SM QA  D+
Sbjct: 70  KFKYLYTFVQVEIESKIAKGSSSCTNGLLWLTRAMDFLVELFRNLVAHQDWSMPQACADS 129

Query: 143 YNLTLKPWHGWISSAAFKIALKLVPDSETFANLLMAKDENNDALVEEIDSFISQLAPFLE 202
           Y  TLK WHGW++S+ F +ALKL PD + F +++      +  +  +++ F ++  PFL 
Sbjct: 130 YQKTLKKWHGWLASSTFSMALKLAPDRKKFMDVI----SGSGNIQADMERFCAEFGPFLH 189

Query: 203 DIHNILVN 211
           D H  L +
Sbjct: 190 DNHKFLAS 193

The following BLAST results are available for this feature:

BLAST of Cucsat.G6450 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LU33	1.2e-57	54.05	Glycolipid transfer protein 3 OS=Arabidopsis thaliana OX=3702 GN=GLTP3 PE=2 SV=1	[more]
Q6NLQ3	1.1e-53	52.83	Glycolipid transfer protein 2 OS=Arabidopsis thaliana OX=3702 GN=GLTP2 PE=2 SV=1	[more]
O22797	2.7e-28	35.64	Glycolipid transfer protein 1 OS=Arabidopsis thaliana OX=3702 GN=GLTP1 PE=2 SV=1	[more]
D3ZY60	5.2e-16	30.23	Pleckstrin homology domain-containing family A member 8 OS=Rattus norvegicus OX=...	[more]
O95397	8.9e-16	31.08	Putative protein PLEKHA9 OS=Homo sapiens OX=9606 GN=PLEKHA8P1 PE=5 SV=1	[more]

BLAST of Cucsat.G6450 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031743313.1	1.37e-164	100.00	glycolipid transfer protein 3 isoform X1 [Cucumis sativus]	[more]
XP_038885263.1	5.58e-146	90.46	glycolipid transfer protein 3-like isoform X1 [Benincasa hispida]	[more]
XP_004148812.1	2.70e-141	100.00	glycolipid transfer protein 3 isoform X2 [Cucumis sativus] >KAE8647183.1 hypothe...	[more]
XP_008441542.1	3.02e-138	97.60	PREDICTED: glycolipid transfer protein 3-like [Cucumis melo]	[more]
XP_038885264.1	7.92e-134	94.71	glycolipid transfer protein 3-like isoform X2 [Benincasa hispida]	[more]

BLAST of Cucsat.G6450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B383	1.46e-138	97.60	glycolipid transfer protein 3-like OS=Cucumis melo OX=3656 GN=LOC103485646 PE=4 ...	[more]
A0A5A7UUW0	2.96e-132	96.98	Glycolipid transfer protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]
A0A6J1FGL0	1.35e-125	88.15	glycolipid transfer protein 3-like isoform X1 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1FHG5	1.07e-124	88.46	glycolipid transfer protein 3-like isoform X2 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1JZV8	9.09e-124	86.73	glycolipid transfer protein 3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]

BLAST of Cucsat.G6450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G21260.3	8.8e-59	54.05	Glycolipid transfer protein (GLTP) family protein	[more]
AT1G21360.1	7.7e-55	52.83	glycolipid transfer protein 2	[more]
AT3G21260.2	4.7e-44	60.58	Glycolipid transfer protein (GLTP) family protein	[more]
AT3G21260.1	1.5e-42	60.15	Glycolipid transfer protein (GLTP) family protein	[more]
AT2G33470.1	1.9e-29	35.64	glycolipid transfer protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036497	Glycolipid transfer protein superfamily	GENE3D	1.10.3520.10	Glycolipid transfer protein	coord: 35..209 e-value: 7.1E-49 score: 168.2
IPR036497	Glycolipid transfer protein superfamily	SUPERFAMILY	110004	Glycolipid transfer protein, GLTP	coord: 31..216
IPR014830	Glycolipid transfer protein domain	PFAM	PF08718	GLTP	coord: 36..177 e-value: 1.8E-39 score: 135.4
None	No IPR available	PANTHER	PTHR10219:SF34	GLYCOLIPID TRANSFER PROTEIN 3	coord: 6..216
None	No IPR available	PANTHER	PTHR10219	GLYCOLIPID TRANSFER PROTEIN-RELATED	coord: 6..216

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G6450.T2	Cucsat.G6450.T2	mRNA
Cucsat.G6450.T1	Cucsat.G6450.T1	mRNA
Cucsat.G6450.T3	Cucsat.G6450.T3	mRNA
Cucsat.G6450.T4	Cucsat.G6450.T4	mRNA
Cucsat.G6450.T5	Cucsat.G6450.T5	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0120009	intermembrane lipid transfer
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0120013	lipid transfer activity