Cucsat.G6450.T2 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G6450.T2
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	glycolipid transfer protein 3-like
Location	ctg1449: 952619 .. 954307 (-)
RNA-Seq Expression	Cucsat.G6450.T2
Synteny	Cucsat.G6450.T2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAATAGCATAAAGCTTTCTCTCTTTTCCTCTCTATGTCTATTACTTACAATAAAATGGTGGTGTAAAATGCAGAGGTTGGAGAACATGTATGAGTCTGATCCTTCGATGTATTCCAATATGGTAGAAATTTTGAAGAAAGAGACAAATGAAGGAAATGCAAGGAAGCTTACCAGTTGTAGCAGAGCCTTTCTTTGGTTGACGAGGTAACTTTTTCATTCTTCAACTTGTTTCATAGATTTACGGTGGAAGTGTATTAAATTTACCTTTGCCCGTCAGCTTAAATTTTGGGTCAATTGGTGTTTTAACAAGTGTTTCTCCCTGCTAGCTGGTTCCTTCTCTGGCTTTTGTTGTGCTGTTCTCTGTTCTGTTTTTAGTAACTGTTTCATCATTCTCTGAGAAAGACCAGAAGATATCTGTTAAGTTCTATCCATTATTCTCTCTCTCTATCTCTCTCTCTCTCTCCCCTTTTCTATGGAGTTGTTGATTATATATTATAAATGAACATAAAATAACATTGATTGATTCTTTTATGAGTTTATTTAAGGTTAGGACTTAAGGAGTTAGGAAACGAATAAAGTAACTCAAAGCTGTGAGAATGATGACAAGCAAGATATGTATTATAATATGAATGAGAACAAGGAGGAAAACAAACCTAAAGTTCATAAAGAGACCAACTTTATTAAAAATTGCATCTGTATTTAATGATCATACTGACTTTTCATTCACCTGTGAAGAATAGAGAGAAAGACTTGATGATAACACTAATTATGGTGTTTTTACTTAGGTCACTGGATTTTACAGTGTCTTTATTACAAAAGTCAAAAGAAGAACCTAGGCTGAGCATGGAGCAAGCGGTTGAGGATGCTTACAACCTTACTCTAAAGCCATGGCATGGATGGATTTCATCTGCTGCTTTCAAAGTAATTATACTCTTTAAGTAATTCTACGTGTTTATCCCTATACCTGTTTCAAACAAGGATTAAATCTTGTGTATTGAAGCAGTTACAACGGGTCAAATTGACCCCTTTCTGCTTTATTTTACTTTACATCTAATCTGATGATCATAGTGGTTTAATATAAACAAAAATTAATATTATGGTTTGTGCAGATAGCTCTGAAACTTGTGCCAGATAGTGAAACCTTTGCTAATCTTCTAATGGCCAAAGACGAAAACAACGATGCCCTTGTGGAGGAAATAGACTCCTTCATTTCCCAACTCGCACCTTTTCTAGAAGATATCCATAATATTCTGGTAAACTCAAGTATTACTTTCAGCATTAGAACCAACTTAATCACGGTTTACCTACTGATCACGTTCATGGATTTCTTTTCCAGAGACTGTACAGGTTAGATCGCTTAAAGTCTGCATAAAGAAAGACCAATGGACAAAAGAAGAATAGTTTCCCAAGTTTTGAGTTCTCTTTGTTTCATTTACATTTTCTTATGTATAGAAAACATGTAAATACAACTGCCATAGGTAGCACAGGAAAGTTTCTTTTCCATCTAAACTTCCTGAAGGTATTTTATTCATACACTTCTCATCTTTCTGCTTCATACAGATATAACAGTTAGGCTTGTAATGTAACTGGTAGAATTACTACTTTACTACCGCACGTCAAGTCTGTAATCTTTAACTGTATAATATATGGTGTTTTCTGTTTGGTCAATGTCAACAAAACAATTATCT

Coding sequence (CDS)

AATAGCATAAAGCTTTCTCTCTTTTCCTCTCTATGTCTATTACTTACAATAAAATGGTGGTGTAAAATGCAGAGGTTGGAGAACATGTATGAGTCTGATCCTTCGATGTATTCCAATATGGTAGAAATTTTGAAGAAAGAGACAAATGAAGGAAATGCAAGGAAGCTTACCAGTTGTAGCAGAGCCTTTCTTTGGTTGACGAGGTCACTGGATTTTACAGTGTCTTTATTACAAAAGTCAAAAGAAGAACCTAGGCTGAGCATGGAGCAAGCGGTTGAGGATGCTTACAACCTTACTCTAAAGCCATGGCATGGATGGATTTCATCTGCTGCTTTCAAAATAGCTCTGAAACTTGTGCCAGATAGTGAAACCTTTGCTAATCTTCTAATGGCCAAAGACGAAAACAACGATGCCCTTGTGGAGGAAATAGACTCCTTCATTTCCCAACTCGCACCTTTTCTAGAAGATATCCATAATATTCTGAGACTGTACAGGTTAGATCGCTTAAAGTCTGCATAA

Protein sequence

NSIKLSLFSSLCLLLTIKWWCKMQRLENMYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFTVSLLQKSKEEPRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETFANLLMAKDENNDALVEEIDSFISQLAPFLEDIHNILRLYRLDRLKSA

Homology

[Close]

BLAST of Cucsat.G6450.T2 vs. ExPASy Swiss-Prot
Match: Q9LU33 (Glycolipid transfer protein 3 OS=Arabidopsis thaliana OX=3702 GN=GLTP3 PE=2 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 2.4e-47
Identity = 89/149 (59.73%), Postives = 119/149 (79.87%), Query Frame = 0


Query: 23  MQRLENMYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFTVSLLQKSKE 82
           +QRLE M+ESDP +YSN+VEIL+KE  EG++RK  SCSRA LWLTR++DFT++LLQ+  +
Sbjct: 84  IQRLEKMWESDPLVYSNLVEILRKEAKEGSSRKPKSCSRAALWLTRAMDFTLALLQRLVK 143

Query: 83  EPRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETFANLLMAKDENNDALVEE 142
           +   +MEQA+E+ YNLT+KPWHGWISSAAFK+ALKLVP++ TF N+L AKDE +  + ++
Sbjct: 144 DMSQNMEQAIEECYNLTIKPWHGWISSAAFKVALKLVPNNNTFINVLAAKDETHQMVQDD 203

Query: 143 IDSFISQLAPFLEDIHNILRLYRLDRLKS 172
           I S IS L P L  +H+IL LY + +LKS
Sbjct: 204 ITSLISLLIPLLSQLHSILELYEVSKLKS 232

[Close]

BLAST of Cucsat.G6450.T2 vs. ExPASy Swiss-Prot
Match: Q6NLQ3 (Glycolipid transfer protein 2 OS=Arabidopsis thaliana OX=3702 GN=GLTP2 PE=2 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 2.7e-38
Identity = 77/149 (51.68%), Postives = 104/149 (69.80%), Query Frame = 0


Query: 23  MQRLENMYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFTVSLLQKSKE 82
           +QRLE  YE+D  +YSN+ EILKKE  EG ++ + SC RA  WLTR++DFT  LL+   +
Sbjct: 74  IQRLEKFYETDSCVYSNLAEILKKEKEEGTSKMVASCGRALFWLTRTMDFTAGLLRLLSK 133

Query: 83  EPRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETFANLLMAKDENNDALVEE 142
           E    ME+ VE+ Y  TLKP HGWI+SAAFK+ LKLVPD++TF   + A+DE+ D L E+
Sbjct: 134 EMSSKMEELVEECYMTTLKPHHGWIASAAFKVCLKLVPDNKTFMEAIGARDESYDTLRED 193

Query: 143 IDSFISQLAPFLEDIHNILRLYRLDRLKS 172
           ID+  S L P L++I+ +L  Y L RL+S
Sbjct: 194 IDTLSSLLTPILKEIYFVLEQYGLSRLRS 222

[Close]

BLAST of Cucsat.G6450.T2 vs. ExPASy Swiss-Prot
Match: O22797 (Glycolipid transfer protein 1 OS=Arabidopsis thaliana OX=3702 GN=GLTP1 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 3.9e-21
Identity = 51/148 (34.46%), Postives = 81/148 (54.73%), Query Frame = 0


Query: 25  RLENMYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFTVSLLQKSKEEP 84
           RLE  Y SDP  +  +   ++ E     A+  +SC+   LWLTR++DF V L +      
Sbjct: 59  RLEKNYLSDPDKFKYLYTFVQVEIESKIAKGSSSCTNGLLWLTRAMDFLVELFRNLVAHQ 118

Query: 85  RLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETFANLLMAKDENNDALVEEID 144
             SM QA  D+Y  TLK WHGW++S+ F +ALKL PD + F +++      +  +  +++
Sbjct: 119 DWSMPQACADSYQKTLKKWHGWLASSTFSMALKLAPDRKKFMDVI----SGSGNIQADME 178

Query: 145 SFISQLAPFLEDIHNILRLYRLDRLKSA 173
            F ++  PFL D H  L    +D +K++
Sbjct: 179 RFCAEFGPFLHDNHKFLASVGMDDMKAS 202

[Close]

BLAST of Cucsat.G6450.T2 vs. ExPASy Swiss-Prot
Match: D3ZY60 (Pleckstrin homology domain-containing family A member 8 OS=Rattus norvegicus OX=10116 GN=Plekha8 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.7e-08
Identity = 42/152 (27.63%), Postives = 70/152 (46.05%), Query Frame = 0


Query: 23  MQRLENMYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFTVSLLQKSKE 82
           ++++   Y ++   ++ + +I+  E     AR   S + A LWL R L F    L + K 
Sbjct: 366 IKKVNQKYITNKEEFTTLQKIVLHEVEADVARVRNSATEALLWLKRGLKFLKGFLTEVKN 425

Query: 83  EPRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETFANLLMAK--DENNDALV 142
             +  ++ A+ +AY  TL+  HGW+    F +AL+  P  E F   L  K  D   +A  
Sbjct: 426 GEK-DIQTALNNAYGKTLRQHHGWVVRGVFALALRAAPSYEDFVAALTIKEGDHQKEAFS 485

Query: 143 EEIDSFISQLAPFLEDIHNIL-RLYRLDRLKS 172
             +   +S   P +E    IL  LY +  L+S
Sbjct: 486 AGMQRDLSLYLPAMEKQLAILDTLYEIHGLES 516

[Close]

BLAST of Cucsat.G6450.T2 vs. ExPASy Swiss-Prot
Match: Q80W71 (Pleckstrin homology domain-containing family A member 8 OS=Mus musculus OX=10090 GN=Plekha8 PE=1 SV=2)

HSP 1 Score: 59.3 bits (142), Expect = 4.9e-08
Identity = 41/152 (26.97%), Postives = 70/152 (46.05%), Query Frame = 0


Query: 23  MQRLENMYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFTVSLLQKSKE 82
           ++++   Y ++   ++ + +I+  E     A+   S + A LWL R L F    L + K 
Sbjct: 365 IKKVNQKYITNKEEFTTLQKIVLHEVEADVAQVRNSATEALLWLKRGLKFLKGFLTEVKN 424

Query: 83  EPRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETFANLLMAK--DENNDALV 142
             +  ++ A+ +AY  TL+  HGW+    F +AL+  P  E F   L  K  D   +A  
Sbjct: 425 GEK-DIQTALNNAYGKTLRQHHGWVVRGVFALALRAAPSYEDFVAALTIKEGDHQKEAFS 484

Query: 143 EEIDSFISQLAPFLEDIHNIL-RLYRLDRLKS 172
             +   +S   P +E    IL  LY +  L+S
Sbjct: 485 AGMQRDLSLYLPAMEKQLAILDTLYEIHGLES 515

[Close]

BLAST of Cucsat.G6450.T2 vs. NCBI nr
Match: XP_004148812.1 (glycolipid transfer protein 3 isoform X2 [Cucumis sativus] >KAE8647183.1 hypothetical protein Csa_018912 [Cucumis sativus])

HSP 1 Score: 295 bits (755), Expect = 3.27e-99
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 24  QRLENMYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFTVSLLQKSKEE 83
           QRLENMYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFTVSLLQKSKEE
Sbjct: 71  QRLENMYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFTVSLLQKSKEE 130

Query: 84  PRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETFANLLMAKDENNDALVEEI 143
           PRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETFANLLMAKDENNDALVEEI
Sbjct: 131 PRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETFANLLMAKDENNDALVEEI 190

Query: 144 DSFISQLAPFLEDIHNILRLYRLDRLKSA 172
           DSFISQLAPFLEDIHNILRLYRLDRLKSA
Sbjct: 191 DSFISQLAPFLEDIHNILRLYRLDRLKSA 219

[Close]

BLAST of Cucsat.G6450.T2 vs. NCBI nr
Match: XP_008441542.1 (PREDICTED: glycolipid transfer protein 3-like [Cucumis melo])

HSP 1 Score: 290 bits (741), Expect = 4.43e-97
Identity = 146/149 (97.99%), Postives = 147/149 (98.66%), Query Frame = 0


Query: 24  QRLENMYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFTVSLLQKSKEE 83
           QRLE MYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFTVSLLQKSKEE
Sbjct: 71  QRLETMYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFTVSLLQKSKEE 130

Query: 84  PRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETFANLLMAKDENNDALVEEI 143
           PRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETF NLLMAKDENNDALV+EI
Sbjct: 131 PRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETFTNLLMAKDENNDALVKEI 190

Query: 144 DSFISQLAPFLEDIHNILRLYRLDRLKSA 172
           DSFISQLAPFLEDIHNILRLYRLDRLKSA
Sbjct: 191 DSFISQLAPFLEDIHNILRLYRLDRLKSA 219

[Close]

BLAST of Cucsat.G6450.T2 vs. NCBI nr
Match: XP_038885264.1 (glycolipid transfer protein 3-like isoform X2 [Benincasa hispida])

HSP 1 Score: 283 bits (724), Expect = 1.72e-94
Identity = 142/149 (95.30%), Postives = 145/149 (97.32%), Query Frame = 0


Query: 24  QRLENMYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFTVSLLQKSKEE 83
           QRLE MYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFTVSLLQKSKEE
Sbjct: 71  QRLETMYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFTVSLLQKSKEE 130

Query: 84  PRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETFANLLMAKDENNDALVEEI 143
           PRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETFANLLMAKDE +D LVEEI
Sbjct: 131 PRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETFANLLMAKDEKSDTLVEEI 190

Query: 144 DSFISQLAPFLEDIHNILRLYRLDRLKSA 172
           DSF+SQL+PFLEDIHNIL LYRLDRLKSA
Sbjct: 191 DSFVSQLSPFLEDIHNILTLYRLDRLKSA 219

[Close]

BLAST of Cucsat.G6450.T2 vs. NCBI nr
Match: XP_022141722.1 (glycolipid transfer protein 3-like [Momordica charantia])

HSP 1 Score: 275 bits (704), Expect = 1.90e-91
Identity = 137/149 (91.95%), Postives = 145/149 (97.32%), Query Frame = 0


Query: 24  QRLENMYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFTVSLLQKSKEE 83
           QRLE+MYESDPS+YSN+VEILKKETNEGNARKLTSCSRAFLWLTR+LDFTV+LLQKSKEE
Sbjct: 71  QRLESMYESDPSVYSNVVEILKKETNEGNARKLTSCSRAFLWLTRTLDFTVALLQKSKEE 130

Query: 84  PRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETFANLLMAKDENNDALVEEI 143
           PRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPD+ETFANLLMAKDE ND LVEEI
Sbjct: 131 PRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDTETFANLLMAKDEKNDTLVEEI 190

Query: 144 DSFISQLAPFLEDIHNILRLYRLDRLKSA 172
           DSFI  L+PFLEDIH+ILRLYRLDRLKSA
Sbjct: 191 DSFILMLSPFLEDIHSILRLYRLDRLKSA 219

[Close]

BLAST of Cucsat.G6450.T2 vs. NCBI nr
Match: XP_031743313.1 (glycolipid transfer protein 3 isoform X1 [Cucumis sativus])

HSP 1 Score: 275 bits (702), Expect = 7.78e-91
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 24  QRLENMYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFTVSLLQKSKEE 83
           QRLENMYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFTVSLLQKSKEE
Sbjct: 71  QRLENMYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFTVSLLQKSKEE 130

Query: 84  PRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETFANLLMAKDENNDALVEEI 143
           PRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETFANLLMAKDENNDALVEEI
Sbjct: 131 PRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETFANLLMAKDENNDALVEEI 190

Query: 144 DSFISQLAPFLEDIHNIL 161
           DSFISQLAPFLEDIHNIL
Sbjct: 191 DSFISQLAPFLEDIHNIL 208

[Close]

BLAST of Cucsat.G6450.T2 vs. ExPASy TrEMBL
Match: A0A1S3B383 (glycolipid transfer protein 3-like OS=Cucumis melo OX=3656 GN=LOC103485646 PE=4 SV=1)

HSP 1 Score: 290 bits (741), Expect = 2.14e-97
Identity = 146/149 (97.99%), Postives = 147/149 (98.66%), Query Frame = 0


Query: 24  QRLENMYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFTVSLLQKSKEE 83
           QRLE MYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFTVSLLQKSKEE
Sbjct: 71  QRLETMYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFTVSLLQKSKEE 130

Query: 84  PRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETFANLLMAKDENNDALVEEI 143
           PRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETF NLLMAKDENNDALV+EI
Sbjct: 131 PRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETFTNLLMAKDENNDALVKEI 190

Query: 144 DSFISQLAPFLEDIHNILRLYRLDRLKSA 172
           DSFISQLAPFLEDIHNILRLYRLDRLKSA
Sbjct: 191 DSFISQLAPFLEDIHNILRLYRLDRLKSA 219

[Close]

BLAST of Cucsat.G6450.T2 vs. ExPASy TrEMBL
Match: A0A6J1CKM9 (glycolipid transfer protein 3-like OS=Momordica charantia OX=3673 GN=LOC111012011 PE=4 SV=1)

HSP 1 Score: 275 bits (704), Expect = 9.21e-92
Identity = 137/149 (91.95%), Postives = 145/149 (97.32%), Query Frame = 0


Query: 24  QRLENMYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFTVSLLQKSKEE 83
           QRLE+MYESDPS+YSN+VEILKKETNEGNARKLTSCSRAFLWLTR+LDFTV+LLQKSKEE
Sbjct: 71  QRLESMYESDPSVYSNVVEILKKETNEGNARKLTSCSRAFLWLTRTLDFTVALLQKSKEE 130

Query: 84  PRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETFANLLMAKDENNDALVEEI 143
           PRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPD+ETFANLLMAKDE ND LVEEI
Sbjct: 131 PRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDTETFANLLMAKDEKNDTLVEEI 190

Query: 144 DSFISQLAPFLEDIHNILRLYRLDRLKSA 172
           DSFI  L+PFLEDIH+ILRLYRLDRLKSA
Sbjct: 191 DSFILMLSPFLEDIHSILRLYRLDRLKSA 219

[Close]

BLAST of Cucsat.G6450.T2 vs. ExPASy TrEMBL
Match: A0A5D3DJY9 (Glycolipid transfer protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G00330 PE=4 SV=1)

HSP 1 Score: 269 bits (688), Expect = 1.36e-89
Identity = 135/138 (97.83%), Postives = 136/138 (98.55%), Query Frame = 0


Query: 24  QRLENMYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFTVSLLQKSKEE 83
           QRLE MYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFTVSLLQKSKEE
Sbjct: 47  QRLETMYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFTVSLLQKSKEE 106

Query: 84  PRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETFANLLMAKDENNDALVEEI 143
           PRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETF NLLMAKDENNDALV+EI
Sbjct: 107 PRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETFTNLLMAKDENNDALVKEI 166

Query: 144 DSFISQLAPFLEDIHNIL 161
           DSFISQLAPFLEDIHNIL
Sbjct: 167 DSFISQLAPFLEDIHNIL 184

[Close]

BLAST of Cucsat.G6450.T2 vs. ExPASy TrEMBL
Match: A0A5A7UUW0 (Glycolipid transfer protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold98G00710 PE=4 SV=1)

HSP 1 Score: 269 bits (688), Expect = 2.05e-89
Identity = 135/138 (97.83%), Postives = 136/138 (98.55%), Query Frame = 0


Query: 24  QRLENMYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFTVSLLQKSKEE 83
           QRLE MYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFTVSLLQKSKEE
Sbjct: 59  QRLETMYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFTVSLLQKSKEE 118

Query: 84  PRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETFANLLMAKDENNDALVEEI 143
           PRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETF NLLMAKDENNDALV+EI
Sbjct: 119 PRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETFTNLLMAKDENNDALVKEI 178

Query: 144 DSFISQLAPFLEDIHNIL 161
           DSFISQLAPFLEDIHNIL
Sbjct: 179 DSFISQLAPFLEDIHNIL 196

[Close]

BLAST of Cucsat.G6450.T2 vs. ExPASy TrEMBL
Match: A0A6J1FHG5 (glycolipid transfer protein 3-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111445490 PE=4 SV=1)

HSP 1 Score: 267 bits (682), Expect = 2.05e-88
Identity = 133/149 (89.26%), Postives = 143/149 (95.97%), Query Frame = 0


Query: 24  QRLENMYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFTVSLLQKSKEE 83
           QRLE++YESDPSMYSNMVEILKKETNEG+ RKLTSCSRAFLWLTRSLDF VSLLQK KEE
Sbjct: 71  QRLESIYESDPSMYSNMVEILKKETNEGSTRKLTSCSRAFLWLTRSLDFIVSLLQKLKEE 130

Query: 84  PRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETFANLLMAKDENNDALVEEI 143
           PR+SMEQAVE+AY+LTLKPWHGWISSAAFKIALKLVPDSETFANLLMAKD+ ND L EEI
Sbjct: 131 PRMSMEQAVEEAYSLTLKPWHGWISSAAFKIALKLVPDSETFANLLMAKDKKNDTLSEEI 190

Query: 144 DSFISQLAPFLEDIHNILRLYRLDRLKSA 172
           DSFIS+L+PFLEDIH+ILRLYRLDRLKSA
Sbjct: 191 DSFISRLSPFLEDIHSILRLYRLDRLKSA 219

[Close]

BLAST of Cucsat.G6450.T2 vs. TAIR 10
Match: AT3G21260.3 (Glycolipid transfer protein (GLTP) family protein )

HSP 1 Score: 189.9 bits (481), Expect = 1.7e-48
Identity = 89/149 (59.73%), Postives = 119/149 (79.87%), Query Frame = 0


Query: 23  MQRLENMYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFTVSLLQKSKE 82
           +QRLE M+ESDP +YSN+VEIL+KE  EG++RK  SCSRA LWLTR++DFT++LLQ+  +
Sbjct: 84  IQRLEKMWESDPLVYSNLVEILRKEAKEGSSRKPKSCSRAALWLTRAMDFTLALLQRLVK 143

Query: 83  EPRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETFANLLMAKDENNDALVEE 142
           +   +MEQA+E+ YNLT+KPWHGWISSAAFK+ALKLVP++ TF N+L AKDE +  + ++
Sbjct: 144 DMSQNMEQAIEECYNLTIKPWHGWISSAAFKVALKLVPNNNTFINVLAAKDETHQMVQDD 203

Query: 143 IDSFISQLAPFLEDIHNILRLYRLDRLKS 172
           I S IS L P L  +H+IL LY + +LKS
Sbjct: 204 ITSLISLLIPLLSQLHSILELYEVSKLKS 232

[Close]

BLAST of Cucsat.G6450.T2 vs. TAIR 10
Match: AT3G21260.2 (Glycolipid transfer protein (GLTP) family protein )

HSP 1 Score: 187.6 bits (475), Expect = 8.5e-48
Identity = 88/147 (59.86%), Postives = 117/147 (79.59%), Query Frame = 0


Query: 25  RLENMYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFTVSLLQKSKEEP 84
           RLE M+ESDP +YSN+VEIL+KE  EG++RK  SCSRA LWLTR++DFT++LLQ+  ++ 
Sbjct: 2   RLEKMWESDPLVYSNLVEILRKEAKEGSSRKPKSCSRAALWLTRAMDFTLALLQRLVKDM 61

Query: 85  RLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETFANLLMAKDENNDALVEEID 144
             +MEQA+E+ YNLT+KPWHGWISSAAFK+ALKLVP++ TF N+L AKDE +  + ++I 
Sbjct: 62  SQNMEQAIEECYNLTIKPWHGWISSAAFKVALKLVPNNNTFINVLAAKDETHQMVQDDIT 121

Query: 145 SFISQLAPFLEDIHNILRLYRLDRLKS 172
           S IS L P L  +H+IL LY + +LKS
Sbjct: 122 SLISLLIPLLSQLHSILELYEVSKLKS 148

[Close]

BLAST of Cucsat.G6450.T2 vs. TAIR 10
Match: AT3G21260.1 (Glycolipid transfer protein (GLTP) family protein )

HSP 1 Score: 182.2 bits (461), Expect = 3.6e-46
Identity = 85/143 (59.44%), Postives = 114/143 (79.72%), Query Frame = 0


Query: 29  MYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFTVSLLQKSKEEPRLSM 88
           M+ESDP +YSN+VEIL+KE  EG++RK  SCSRA LWLTR++DFT++LLQ+  ++   +M
Sbjct: 1   MWESDPLVYSNLVEILRKEAKEGSSRKPKSCSRAALWLTRAMDFTLALLQRLVKDMSQNM 60

Query: 89  EQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETFANLLMAKDENNDALVEEIDSFIS 148
           EQA+E+ YNLT+KPWHGWISSAAFK+ALKLVP++ TF N+L AKDE +  + ++I S IS
Sbjct: 61  EQAIEECYNLTIKPWHGWISSAAFKVALKLVPNNNTFINVLAAKDETHQMVQDDITSLIS 120

Query: 149 QLAPFLEDIHNILRLYRLDRLKS 172
            L P L  +H+IL LY + +LKS
Sbjct: 121 LLIPLLSQLHSILELYEVSKLKS 143

[Close]

BLAST of Cucsat.G6450.T2 vs. TAIR 10
Match: AT1G21360.1 (glycolipid transfer protein 2 )

HSP 1 Score: 159.8 bits (403), Expect = 1.9e-39
Identity = 77/149 (51.68%), Postives = 104/149 (69.80%), Query Frame = 0


Query: 23  MQRLENMYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFTVSLLQKSKE 82
           +QRLE  YE+D  +YSN+ EILKKE  EG ++ + SC RA  WLTR++DFT  LL+   +
Sbjct: 74  IQRLEKFYETDSCVYSNLAEILKKEKEEGTSKMVASCGRALFWLTRTMDFTAGLLRLLSK 133

Query: 83  EPRLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETFANLLMAKDENNDALVEE 142
           E    ME+ VE+ Y  TLKP HGWI+SAAFK+ LKLVPD++TF   + A+DE+ D L E+
Sbjct: 134 EMSSKMEELVEECYMTTLKPHHGWIASAAFKVCLKLVPDNKTFMEAIGARDESYDTLRED 193

Query: 143 IDSFISQLAPFLEDIHNILRLYRLDRLKS 172
           ID+  S L P L++I+ +L  Y L RL+S
Sbjct: 194 IDTLSSLLTPILKEIYFVLEQYGLSRLRS 222

[Close]

BLAST of Cucsat.G6450.T2 vs. TAIR 10
Match: AT2G33470.1 (glycolipid transfer protein 1 )

HSP 1 Score: 102.8 bits (255), Expect = 2.8e-22
Identity = 51/148 (34.46%), Postives = 81/148 (54.73%), Query Frame = 0


Query: 25  RLENMYESDPSMYSNMVEILKKETNEGNARKLTSCSRAFLWLTRSLDFTVSLLQKSKEEP 84
           RLE  Y SDP  +  +   ++ E     A+  +SC+   LWLTR++DF V L +      
Sbjct: 59  RLEKNYLSDPDKFKYLYTFVQVEIESKIAKGSSSCTNGLLWLTRAMDFLVELFRNLVAHQ 118

Query: 85  RLSMEQAVEDAYNLTLKPWHGWISSAAFKIALKLVPDSETFANLLMAKDENNDALVEEID 144
             SM QA  D+Y  TLK WHGW++S+ F +ALKL PD + F +++      +  +  +++
Sbjct: 119 DWSMPQACADSYQKTLKKWHGWLASSTFSMALKLAPDRKKFMDVI----SGSGNIQADME 178

Query: 145 SFISQLAPFLEDIHNILRLYRLDRLKSA 173
            F ++  PFL D H  L    +D +K++
Sbjct: 179 RFCAEFGPFLHDNHKFLASVGMDDMKAS 202

The following BLAST results are available for this feature:

BLAST of Cucsat.G6450.T2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LU33	2.4e-47	59.73	Glycolipid transfer protein 3 OS=Arabidopsis thaliana OX=3702 GN=GLTP3 PE=2 SV=1	[more]
Q6NLQ3	2.7e-38	51.68	Glycolipid transfer protein 2 OS=Arabidopsis thaliana OX=3702 GN=GLTP2 PE=2 SV=1	[more]
O22797	3.9e-21	34.46	Glycolipid transfer protein 1 OS=Arabidopsis thaliana OX=3702 GN=GLTP1 PE=2 SV=1	[more]
D3ZY60	1.7e-08	27.63	Pleckstrin homology domain-containing family A member 8 OS=Rattus norvegicus OX=...	[more]
Q80W71	4.9e-08	26.97	Pleckstrin homology domain-containing family A member 8 OS=Mus musculus OX=10090...	[more]

BLAST of Cucsat.G6450.T2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148812.1	3.27e-99	100.00	glycolipid transfer protein 3 isoform X2 [Cucumis sativus] >KAE8647183.1 hypothe...	[more]
XP_008441542.1	4.43e-97	97.99	PREDICTED: glycolipid transfer protein 3-like [Cucumis melo]	[more]
XP_038885264.1	1.72e-94	95.30	glycolipid transfer protein 3-like isoform X2 [Benincasa hispida]	[more]
XP_022141722.1	1.90e-91	91.95	glycolipid transfer protein 3-like [Momordica charantia]	[more]
XP_031743313.1	7.78e-91	100.00	glycolipid transfer protein 3 isoform X1 [Cucumis sativus]	[more]

BLAST of Cucsat.G6450.T2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B383	2.14e-97	97.99	glycolipid transfer protein 3-like OS=Cucumis melo OX=3656 GN=LOC103485646 PE=4 ...	[more]
A0A6J1CKM9	9.21e-92	91.95	glycolipid transfer protein 3-like OS=Momordica charantia OX=3673 GN=LOC11101201...	[more]
A0A5D3DJY9	1.36e-89	97.83	Glycolipid transfer protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A5A7UUW0	2.05e-89	97.83	Glycolipid transfer protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]
A0A6J1FHG5	2.05e-88	89.26	glycolipid transfer protein 3-like isoform X2 OS=Cucurbita moschata OX=3662 GN=L...	[more]

BLAST of Cucsat.G6450.T2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G21260.3	1.7e-48	59.73	Glycolipid transfer protein (GLTP) family protein	[more]
AT3G21260.2	8.5e-48	59.86	Glycolipid transfer protein (GLTP) family protein	[more]
AT3G21260.1	3.6e-46	59.44	Glycolipid transfer protein (GLTP) family protein	[more]
AT1G21360.1	1.9e-39	51.68	glycolipid transfer protein 2	[more]
AT2G33470.1	2.8e-22	34.46	glycolipid transfer protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036497	Glycolipid transfer protein superfamily	GENE3D	1.10.3520.10	Glycolipid transfer protein	coord: 7..162 e-value: 2.1E-36 score: 127.5
IPR036497	Glycolipid transfer protein superfamily	SUPERFAMILY	110004	Glycolipid transfer protein, GLTP	coord: 17..169
IPR014830	Glycolipid transfer protein domain	PFAM	PF08718	GLTP	coord: 22..130 e-value: 4.9E-28 score: 98.3
None	No IPR available	PANTHER	PTHR10219	GLYCOLIPID TRANSFER PROTEIN-RELATED	coord: 23..169
None	No IPR available	PANTHER	PTHR10219:SF34	GLYCOLIPID TRANSFER PROTEIN 3	coord: 23..169

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G6450	Cucsat.G6450	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G6450.T2.E1	Cucsat.G6450.T2.E1	exon
Cucsat.G6450.T2.E2	Cucsat.G6450.T2.E2	exon
Cucsat.G6450.T2.E3	Cucsat.G6450.T2.E3	exon
Cucsat.G6450.T2.E4	Cucsat.G6450.T2.E4	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G6450.T2.C4	Cucsat.G6450.T2.C4	CDS
Cucsat.G6450.T2.C3	Cucsat.G6450.T2.C3	CDS
Cucsat.G6450.T2.C2	Cucsat.G6450.T2.C2	CDS
Cucsat.G6450.T2.C1	Cucsat.G6450.T2.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G6450.T2	Cucsat.G6450.T2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0120009	intermembrane lipid transfer
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0120013	lipid transfer activity