Cucsat.G4856 (gene) Cucumber (B10) v3

Overview
NameCucsat.G4856
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionTraB domain-containing protein
Locationctg1227: 5187188 .. 5191002 (+)
RNA-Seq ExpressionCucsat.G4856
SyntenyCucsat.G4856
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATATATATATATATATATATATATTGAATCTTGAAATTCAGGTAAGAAGGGAAAGGCGAGGTGTATGAATCGATTAACTCGTTGTGCAACTCAGCTCAACTTGACCGAGTCACACCGGTTCATCGTAACAGCCACCGTCAAACCTCATCGCCGGCGTCTCAATTATGCCCTAACTTTCAAACCGCACCGGCATTTTTCAGCTCCATTCGATTTCGGGATTTTCTTCTCCCAAAACTCTGACCGTCCTCGGCGTCTACCCCGTTTGCCTCAGGTGATGGACCCGGTTCCTCCGGAATCTGATTCCCCTGCCGTTGAAGATTTTGTCCACATCGAGGACCCTAACATCGAGAGTTTGTGCGAGAGTATTGTTAGTACTACTGATGAACAGATCAACGACGAGGCAGCCTCTGTGATTTCCCCTGAGGCCGAGGAGGGTTTGGCGGAGCAGAGGAGAGTACTACCGGAGGAGCTTTCTAGAAGCGTGTTGGTATTGACTTGCGAGACCACTGGTGAAGGTGGCATTTGTGACGTATACCTAGTTGGAACGGCACACGTTTCTCAAGTAACTTCTTGATTTTCGATTGTGATAAATTGTCTTGTATTTGTGGCATTTGGTTCTTGAAATTTTGGAGGATATGGGGTGAAAAAGTATCGATTACAGTGAGAGTTCTTAACCCTTTCCGAATTTATTTGATTGAGGAATTCGAGTTAGAACTGAAGTAGATCACTTTTATGGATGCAGGAATCGTGCAGAGAAGTTCAAGCTGTAATCAGTTATTTGAAACCTCAGGCACTTCCTCTTTTTTGAATCTCGATTGTTTTAGATGGTTTGTTTTGCAGGCTATTTTCCTTCTTTCATGTGTTTACAATGTTGCTTGTGCGTTTGCTTATGTGAATGCAGGTCGTCTTCTTGGAGCTATGCGCAAGCCGAGTGGCAGTCCTCACCCCTCAGAATTTGAAGGTGGTGTTGTAATTTGTTTATAGAGATAATTTCAAATTCAAGCAAATAGCTTGTTGATTGAAGTTCACATTTTTTTTCTTTTTTTTTTCTTTTTAAGTTGCTTTGAACATGAAGTCTTGAACTATTACAAATTATGATTGCTGGTTAAAATCGATTACACAAATTCAGTGCCATACAGCATATGTGTCTCTTTTATCCCTCAATTTTTGCTCTCCCTGACCCTTAGTTCTTCAGGTTCCAACTATGGGAGAAATGGTTGAAATGTGGAAGAAAAAGCATAACATCTTTGGTATACTTTACAGTTGGTTTCTTGCGAAGGCAAGTTCTTTTTAGTTTTCTGTAGGTTTTATAGTGCATTTTTTGTTTTGTTTTTTTTGACAATTTTATTTGAAAGATTGCCTCTAATTTTACTTCCTTACTTTTATCTTAGGTAGCCAACAAACTCGAAGTATTCCCTGGTTCAGAGTTTCGTGTAGCCTATGAAGAAGCAATGAAGTATCGTGGTAAGGTAATTCTTGGTGATCGTCCAGTGCAGGTATGATCTCTTTCTCTCTCTCTCTTAAAGATTAAAACTTTTTCTTTTTTAAATAGAGCCTGTGATAGGATTTCTTGAACAAATATCTATTCTCATAACCTTTCTTACACAATTATATTTGCTTCAAAATCAATATGATTGTCTCAACTACCCTTCTTGAGAACTTATTCTGAAAAAGTGTCTGCTGTGGGATAAGTCTGTTCACCGGGTACGGTCGGCTGGTGTCAAGCCTCAAACGTACTTGAGAGCTTTTAATTGTTTTCCGATGTGATATTCACCTTAAAGGTGCTTTACATTCTGTTGGCCCTGACATCCACATGTGCATTCTATTGTGTGCTTTGATTGGTCCTGGATTAGTTTGAACGTATATTCATTTGCTACATGTGCCACTGCTCAATTTACATCACATCCTATTACTATTGTATTTTTCCTGTGTTAGTTTTTGAGCATACCTTTTGATTTGTATCCTTACCATTCTTTTTCTGTCTTTTGATCATGTTAATTTGCAACAAATAACCTTAATCCTCAATGAGGTGACATTTAGTTTGTCATTTTAATATAGCTGAACATACTGTAATATTTTGACGTTTACTCAACAGATTACAATTAGAAGAGCATGGGCGAAAATGCCCCTTTGGCATAAGATAAAATTGCTTTATTCCTTCGTTTTTCAAGCATTCTTTTTGCCAAGCCCCGAGGAATTAACCAAGATGGTATAATTTCATTAACTCTCTCTTTATCCTCACAGGAGAGGATTTTTCTCTATTTTTCTGTTTAATTGTGAGACAAATTGAAACGATTTGCTGTACTAATGCTATTTCTATCTTCAGTTGAAGGATATGGACGATGTTGACATGCTCACGCTCATAATTCAAGAAATGAGCAAGGAATTTCCCACATTAATGGACACTCTTGTGCACGAGCGAGATCGGTTAGTACATTTACCTTTGTGCTGTGTGAAGGCCATTGCGTTTTTCCTCTTTCAATGTGTTTTCTTTATTCAAATAGGAAGAAGTTTAGGAACTATTTGCAGTTGACTTTTTTTTTTATGACAAAATCTTTATTCTTTTCTTTCTGTGCAGTAAATACATGTTTGCATAACATTTTTTTTCTTTTTTAAAAAATAATAAATAAGTTTTCTTTTCTTTTTTTCCATTGGTTATTTTCCAATAGATTTAACAAGTTTTTTTTTCTCACTTTGACACCCAAATGTTGTCTTGTGAGATTAGTCGAAGTGTCCATAGGCTGATCCAAGATAATAATATTGTGTTTTCCTCCTGACGTATACTTCGTGGAATTATAAGATGATTCTTCAAAGGATTGGCAACACTTTGGAAAGTCCTAACTTCATAAATTAAAATCAGTTTTCTGCTCAACAATGTGTTCTGATTTCATGTTATATCCATCATTGTTGCACAATAGTTTTTTATCTTCCATTCGTGTTCTTGACTCACCCATATGTCTATAACTGTTTCAGGTACATGTCAACAACGTTACTAGGAGTAGCCAAGGAGCATCAATCGGTCGTTGCAGTTGTGGGGAAAGGTCATCTAAGTGGAATTAAGAAGAATTGGCAGCAGCCTGTTACTGTAGGTTTCACTCTCCCATTTCTTGAGAAATTTGATTGGTATTCCCTCTCTTCTCTTTACACAAGTATACATTTTCTTAAAATTGCAGCTCGAGGATCTTTTGGAAATGCCTCCCCAAAAAGGAGTCCCTGTCATCAAGATCTTTTCGTCAATAGGTGTTGCAGTTGCTGGAGTTGCCATCATATCAGGTGTTTACCTTGCATGCAAAAAATAACACTATTGAAACTCACCTCAAAGGCTAATCTGATGCAAAGAATGCTCGCTTGATCGTCAAATCTGAAGTTACTATTGGATTAGTTTGTACTTTTTAAACGAGTCCTCCTTGATTGAGGTTTGCCTTCACAGAATGAGTTAACCACAAATAATTTTTTCTCGTTATAGTTTCCTTCCCTTCTCTAGCTGTCTGGTCTAGCAAACTTGGAATCATCACAATGATGAGAAGTTTAACATTAGGCTAATAAAGTTAGAACGATTGAAAGTACTATAGCTACATTTCTTGAAACATTAATATATAATTGTTCAAAACAGAAAAAAGATATTTTTGTCTGCCCAGCTTGTTTGAGACTTCATCAATGAGACAGATTCCAAATGGAATGGCTTGCTAAGGATGCTCTTGTAAGCACTTGGGGCATCTGCATTCGAACCCATAATCTGCAAGTAATGCTCGTCTCTGATCAAATGGTAGATCTTCGTCTATATATGAAATTGTCACCTGAAAAAAATGCACTAATTGCATCAATATATTTTCACACAAGTTTCTTTGTGACTTGT

Coding sequence (CDS)

ATGAATCGATTAACTCGTTGTGCAACTCAGCTCAACTTGACCGAGTCACACCGGTTCATCGTAACAGCCACCGTCAAACCTCATCGCCGGCGTCTCAATTATGCCCTAACTTTCAAACCGCACCGGCATTTTTCAGCTCCATTCGATTTCGGGATTTTCTTCTCCCAAAACTCTGACCGTCCTCGGCGTCTACCCCGTTTGCCTCAGGTGATGGACCCGGTTCCTCCGGAATCTGATTCCCCTGCCGTTGAAGATTTTGTCCACATCGAGGACCCTAACATCGAGAGTTTGTGCGAGAGTATTGTTAGTACTACTGATGAACAGATCAACGACGAGGCAGCCTCTGTGATTTCCCCTGAGGCCGAGGAGGGTTTGGCGGAGCAGAGGAGAGTACTACCGGAGGAGCTTTCTAGAAGCGTGTTGGTATTGACTTGCGAGACCACTGGTGAAGGTGGCATTTGTGACGTATACCTAGTTGGAACGGCACACGTTTCTCAAGAATCGTGCAGAGAAGTTCAAGCTGTAATCAGTTATTTGAAACCTCAGGTCGTCTTCTTGGAGCTATGCGCAAGCCGAGTGGCAGTCCTCACCCCTCAGAATTTGAAGGTTCCAACTATGGGAGAAATGGTTGAAATGTGGAAGAAAAAGCATAACATCTTTGGTATACTTTACAGTTGGTTTCTTGCGAAGGTAGCCAACAAACTCGAAGTATTCCCTGGTTCAGAGTTTCGTGTAGCCTATGAAGAAGCAATGAAGTATCGTGGTAAGGTAATTCTTGGTGATCGTCCAGTGCAGGTATGA

Protein sequence

MNRLTRCATQLNLTESHRFIVTATVKPHRRRLNYALTFKPHRHFSAPFDFGIFFSQNSDRPRRLPRLPQVMDPVPPESDSPAVEDFVHIEDPNIESLCESIVSTTDEQINDEAASVISPEAEEGLAEQRRVLPEELSRSVLVLTCETTGEGGICDVYLVGTAHVSQESCREVQAVISYLKPQVVFLELCASRVAVLTPQNLKVPTMGEMVEMWKKKHNIFGILYSWFLAKVANKLEVFPGSEFRVAYEEAMKYRGKVILGDRPVQV
Homology
[Close]
BLAST of Cucsat.G4856 vs. ExPASy Swiss-Prot
Match: Q58DF3 (TraB domain-containing protein OS=Bos taurus OX=9913 GN=TRABD PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.2e-07
Identity = 38/124 (30.65%), Postives = 62/124 (50.00%), Query Frame = 0 

Query: 1   MPLWHKIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEFPTLMDTLVHE 60
           + LW K+KL +   F +   P  ++  +  K     D+L  ++ EM  EFP L  T+V E
Sbjct: 204 LSLWQKVKLAWGLCFLSD--PISKDDVERCKQK---DLLEQMMAEMVGEFPDLHRTIVSE 263

Query: 61  RDRYMSTTLLGVAKEHQ---------------SVVAVVGKGHLSGIKKNWQQPVTLEDLL 110
           RD Y++  L   A+  +                VV VVG GH+ GI+KNW   + +++++
Sbjct: 264 RDVYLTYMLRQAARRLELPRASDAEPRKCVPSVVVGVVGMGHVPGIEKNWTTDLNIQEIM 322

[Close]
BLAST of Cucsat.G4856 vs. ExPASy Swiss-Prot
Match: Q99JY4 (TraB domain-containing protein OS=Mus musculus OX=10090 GN=Trabd PE=1 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.6e-07
Identity = 37/124 (29.84%), Postives = 61/124 (49.19%), Query Frame = 0 

Query: 1   MPLWHKIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEFPTLMDTLVHE 60
           +  W K+KL +   F +   P  ++  +  K     D+L  ++ EM  EFP L  T+V E
Sbjct: 203 LSFWQKVKLAWGLCFLSD--PISKDDVERCKQK---DLLEQMMAEMIGEFPDLHRTIVSE 262

Query: 61  RDRYMSTTLLGVAKEHQ---------------SVVAVVGKGHLSGIKKNWQQPVTLEDLL 110
           RD Y++  L   A+  +                VV VVG GH+ GI+KNW   + +++++
Sbjct: 263 RDVYLTYMLRQAARRLELPRASDAEPRKCVPSVVVGVVGMGHVPGIEKNWSTDLNIQEIM 321

[Close]
BLAST of Cucsat.G4856 vs. ExPASy Swiss-Prot
Match: Q9H4I3 (TraB domain-containing protein OS=Homo sapiens OX=9606 GN=TRABD PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 5.8e-07
Identity = 36/124 (29.03%), Postives = 61/124 (49.19%), Query Frame = 0 

Query: 1   MPLWHKIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEFPTLMDTLVHE 60
           +  W K++L +   F +   P  ++  +  K     D+L  ++ EM  EFP L  T+V E
Sbjct: 204 LSFWQKVRLAWGLCFLSD--PISKDDVERCKQK---DLLEQMMAEMIGEFPDLHRTIVSE 263

Query: 61  RDRYMSTTLLGVAKEHQ---------------SVVAVVGKGHLSGIKKNWQQPVTLEDLL 110
           RD Y++  L   A+  +                VV VVG GH+ GI+KNW   + +++++
Sbjct: 264 RDVYLTYMLRQAARRLELPRASDAEPRKCVPSVVVGVVGMGHVPGIEKNWSTDLNIQEIM 322

[Close]
BLAST of Cucsat.G4856 vs. ExPASy Swiss-Prot
Match: Q58760 (Uncharacterized protein MJ1365 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ1365 PE=4 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 2.1e-04
Identity = 34/123 (27.64%), Postives = 65/123 (52.85%), Query Frame = 0 

Query: 22  SPEELTKMLKDMDDVDMLTLIIQEMSKEFPTLMDTLVHERDRYMSTTLLGVAKEHQSVVA 81
           +PE+  K+LK++                 PT+ + LV ERDR+M+  L  ++K   S+VA
Sbjct: 171 NPEKFIKLLKEIS----------------PTIYEVLVDERDRFMAKRLFELSKNKNSLVA 230

Query: 82  VVGKGHLSGIKKNWQQ-----PVTLEDLLEMPPQKGVPVIKIFSSIGVAVAGVAIISGVY 140
           VVG GH+ GI +  ++      + L +L+++  +K    +K   + G+++  ++I   +Y
Sbjct: 231 VVGAGHVEGIVRYLKKLENGNDIDLMELIKVKKRK--KSLKKLLTYGISLTIISIF--LY 273

[Close]
BLAST of Cucsat.G4856 vs. NCBI nr
Match: XP_004151877.1 (traB domain-containing protein [Cucumis sativus])

HSP 1 Score: 270 bits (691), Expect = 2.58e-87
Identity = 139/141 (98.58%), Postives = 140/141 (99.29%), Query Frame = 0 

Query: 1   MPLWHKIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEFPTLMDTLVHE 60
           MPLWHKIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEFPTLMDTLVHE
Sbjct: 275 MPLWHKIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEFPTLMDTLVHE 334

Query: 61  RDRYMSTTLLGVAKEHQSVVAVVGKGHLSGIKKNWQQPVTLEDLLEMPPQKGVPVIKIFS 120
           RDRYMSTTLLGVAKEHQSVVAVVGKGHLSGIKKNWQQPVTLEDLLEMP QKGVPV+KIFS
Sbjct: 335 RDRYMSTTLLGVAKEHQSVVAVVGKGHLSGIKKNWQQPVTLEDLLEMPTQKGVPVVKIFS 394

Query: 121 SIGVAVAGVAIISGVYLACKK 141
           SIGVAVAGVAIISGVYLACKK
Sbjct: 395 SIGVAVAGVAIISGVYLACKK 415

[Close]
BLAST of Cucsat.G4856 vs. NCBI nr
Match: KAE8652300.1 (hypothetical protein Csa_022184 [Cucumis sativus])

HSP 1 Score: 270 bits (691), Expect = 2.58e-87
Identity = 139/141 (98.58%), Postives = 140/141 (99.29%), Query Frame = 0 

Query: 1   MPLWHKIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEFPTLMDTLVHE 60
           MPLWHKIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEFPTLMDTLVHE
Sbjct: 275 MPLWHKIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEFPTLMDTLVHE 334

Query: 61  RDRYMSTTLLGVAKEHQSVVAVVGKGHLSGIKKNWQQPVTLEDLLEMPPQKGVPVIKIFS 120
           RDRYMSTTLLGVAKEHQSVVAVVGKGHLSGIKKNWQQPVTLEDLLEMP QKGVPV+KIFS
Sbjct: 335 RDRYMSTTLLGVAKEHQSVVAVVGKGHLSGIKKNWQQPVTLEDLLEMPTQKGVPVVKIFS 394

Query: 121 SIGVAVAGVAIISGVYLACKK 141
           SIGVAVAGVAIISGVYLACKK
Sbjct: 395 SIGVAVAGVAIISGVYLACKK 415

[Close]
BLAST of Cucsat.G4856 vs. NCBI nr
Match: KAA0042435.1 (traB domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 258 bits (659), Expect = 1.75e-82
Identity = 134/141 (95.04%), Postives = 138/141 (97.87%), Query Frame = 0 

Query: 1   MPLWHKIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEFPTLMDTLVHE 60
           MPL  KIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKE+PTLMDTLVHE
Sbjct: 275 MPLCQKIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEYPTLMDTLVHE 334

Query: 61  RDRYMSTTLLGVAKEHQSVVAVVGKGHLSGIKKNWQQPVTLEDLLEMPPQKGVPVIKIFS 120
           RD+YMSTTLLGVAKEHQSVVAVVGKGHLSGIKKNWQQPVTLEDLLEMPPQK VPV+KIF+
Sbjct: 335 RDQYMSTTLLGVAKEHQSVVAVVGKGHLSGIKKNWQQPVTLEDLLEMPPQKRVPVLKIFT 394

Query: 121 SIGVAVAGVAIISGVYLACKK 141
           SIGVAVAGVAIISGVYLACKK
Sbjct: 395 SIGVAVAGVAIISGVYLACKK 415

[Close]
BLAST of Cucsat.G4856 vs. NCBI nr
Match: KAG7034961.1 (TraB domain-containing protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 251 bits (640), Expect = 2.22e-82
Identity = 126/141 (89.36%), Postives = 136/141 (96.45%), Query Frame = 0 

Query: 1   MPLWHKIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEFPTLMDTLVHE 60
           MPLWHKIKLLYSFVFQAFFLP PEELTKMLKDMDDVDMLTLIIQEMSKEFPTLMDTLVHE
Sbjct: 70  MPLWHKIKLLYSFVFQAFFLPGPEELTKMLKDMDDVDMLTLIIQEMSKEFPTLMDTLVHE 129

Query: 61  RDRYMSTTLLGVAKEHQSVVAVVGKGHLSGIKKNWQQPVTLEDLLEMPPQKGVPVIKIFS 120
           RD+YMSTTLL VAKEH+SVVAVVGKGHL+GIKKNWQQPV L+DLLEMP QK VPV+KIF+
Sbjct: 130 RDQYMSTTLLRVAKEHRSVVAVVGKGHLNGIKKNWQQPVKLKDLLEMPEQKRVPVVKIFT 189

Query: 121 SIGVAVAGVAIISGVYLACKK 141
           S+G+AVAGVAIISG+YLAC+K
Sbjct: 190 SLGIAVAGVAIISGIYLACRK 210

[Close]
BLAST of Cucsat.G4856 vs. NCBI nr
Match: XP_008455837.1 (PREDICTED: traB domain-containing protein [Cucumis melo])

HSP 1 Score: 257 bits (657), Expect = 3.51e-82
Identity = 133/141 (94.33%), Postives = 138/141 (97.87%), Query Frame = 0 

Query: 1   MPLWHKIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEFPTLMDTLVHE 60
           MPL  KIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKE+PTLMDTLVHE
Sbjct: 275 MPLCKKIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEYPTLMDTLVHE 334

Query: 61  RDRYMSTTLLGVAKEHQSVVAVVGKGHLSGIKKNWQQPVTLEDLLEMPPQKGVPVIKIFS 120
           RD+YMSTTLLGVAKEHQSVVAVVGKGHLSGIKKNWQQPVTLEDLLEMPPQK VPV+KIF+
Sbjct: 335 RDQYMSTTLLGVAKEHQSVVAVVGKGHLSGIKKNWQQPVTLEDLLEMPPQKRVPVLKIFT 394

Query: 121 SIGVAVAGVAIISGVYLACKK 141
           SIGVAVAGVAI+SGVYLACKK
Sbjct: 395 SIGVAVAGVAIVSGVYLACKK 415

[Close]
BLAST of Cucsat.G4856 vs. ExPASy TrEMBL
Match: A0A0A0LTA7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G422020 PE=4 SV=1)

HSP 1 Score: 270 bits (691), Expect = 1.25e-87
Identity = 139/141 (98.58%), Postives = 140/141 (99.29%), Query Frame = 0 

Query: 1   MPLWHKIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEFPTLMDTLVHE 60
           MPLWHKIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEFPTLMDTLVHE
Sbjct: 275 MPLWHKIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEFPTLMDTLVHE 334

Query: 61  RDRYMSTTLLGVAKEHQSVVAVVGKGHLSGIKKNWQQPVTLEDLLEMPPQKGVPVIKIFS 120
           RDRYMSTTLLGVAKEHQSVVAVVGKGHLSGIKKNWQQPVTLEDLLEMP QKGVPV+KIFS
Sbjct: 335 RDRYMSTTLLGVAKEHQSVVAVVGKGHLSGIKKNWQQPVTLEDLLEMPTQKGVPVVKIFS 394

Query: 121 SIGVAVAGVAIISGVYLACKK 141
           SIGVAVAGVAIISGVYLACKK
Sbjct: 395 SIGVAVAGVAIISGVYLACKK 415

[Close]
BLAST of Cucsat.G4856 vs. ExPASy TrEMBL
Match: A0A5A7TLX0 (TraB domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold266G00140 PE=4 SV=1)

HSP 1 Score: 258 bits (659), Expect = 8.49e-83
Identity = 134/141 (95.04%), Postives = 138/141 (97.87%), Query Frame = 0 

Query: 1   MPLWHKIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEFPTLMDTLVHE 60
           MPL  KIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKE+PTLMDTLVHE
Sbjct: 275 MPLCQKIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEYPTLMDTLVHE 334

Query: 61  RDRYMSTTLLGVAKEHQSVVAVVGKGHLSGIKKNWQQPVTLEDLLEMPPQKGVPVIKIFS 120
           RD+YMSTTLLGVAKEHQSVVAVVGKGHLSGIKKNWQQPVTLEDLLEMPPQK VPV+KIF+
Sbjct: 335 RDQYMSTTLLGVAKEHQSVVAVVGKGHLSGIKKNWQQPVTLEDLLEMPPQKRVPVLKIFT 394

Query: 121 SIGVAVAGVAIISGVYLACKK 141
           SIGVAVAGVAIISGVYLACKK
Sbjct: 395 SIGVAVAGVAIISGVYLACKK 415

[Close]
BLAST of Cucsat.G4856 vs. ExPASy TrEMBL
Match: A0A5D3BJE9 (TraB domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold232G00240 PE=4 SV=1)

HSP 1 Score: 257 bits (657), Expect = 1.70e-82
Identity = 133/141 (94.33%), Postives = 138/141 (97.87%), Query Frame = 0 

Query: 1   MPLWHKIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEFPTLMDTLVHE 60
           MPL  KIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKE+PTLMDTLVHE
Sbjct: 275 MPLCKKIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEYPTLMDTLVHE 334

Query: 61  RDRYMSTTLLGVAKEHQSVVAVVGKGHLSGIKKNWQQPVTLEDLLEMPPQKGVPVIKIFS 120
           RD+YMSTTLLGVAKEHQSVVAVVGKGHLSGIKKNWQQPVTLEDLLEMPPQK VPV+KIF+
Sbjct: 335 RDQYMSTTLLGVAKEHQSVVAVVGKGHLSGIKKNWQQPVTLEDLLEMPPQKRVPVLKIFT 394

Query: 121 SIGVAVAGVAIISGVYLACKK 141
           SIGVAVAGVAI+SGVYLACKK
Sbjct: 395 SIGVAVAGVAIVSGVYLACKK 415

[Close]
BLAST of Cucsat.G4856 vs. ExPASy TrEMBL
Match: A0A1S3C338 (traB domain-containing protein OS=Cucumis melo OX=3656 GN=LOC103495939 PE=4 SV=1)

HSP 1 Score: 257 bits (657), Expect = 1.70e-82
Identity = 133/141 (94.33%), Postives = 138/141 (97.87%), Query Frame = 0 

Query: 1   MPLWHKIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEFPTLMDTLVHE 60
           MPL  KIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKE+PTLMDTLVHE
Sbjct: 275 MPLCKKIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEYPTLMDTLVHE 334

Query: 61  RDRYMSTTLLGVAKEHQSVVAVVGKGHLSGIKKNWQQPVTLEDLLEMPPQKGVPVIKIFS 120
           RD+YMSTTLLGVAKEHQSVVAVVGKGHLSGIKKNWQQPVTLEDLLEMPPQK VPV+KIF+
Sbjct: 335 RDQYMSTTLLGVAKEHQSVVAVVGKGHLSGIKKNWQQPVTLEDLLEMPPQKRVPVLKIFT 394

Query: 121 SIGVAVAGVAIISGVYLACKK 141
           SIGVAVAGVAI+SGVYLACKK
Sbjct: 395 SIGVAVAGVAIVSGVYLACKK 415

[Close]
BLAST of Cucsat.G4856 vs. ExPASy TrEMBL
Match: A0A6J1CGW1 (traB domain-containing protein OS=Momordica charantia OX=3673 GN=LOC111011104 PE=4 SV=1)

HSP 1 Score: 254 bits (650), Expect = 1.88e-81
Identity = 129/141 (91.49%), Postives = 137/141 (97.16%), Query Frame = 0 

Query: 1   MPLWHKIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEFPTLMDTLVHE 60
           MPLWHKIKLLYSF+FQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEFPTLMDTLVHE
Sbjct: 274 MPLWHKIKLLYSFLFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEFPTLMDTLVHE 333

Query: 61  RDRYMSTTLLGVAKEHQSVVAVVGKGHLSGIKKNWQQPVTLEDLLEMPPQKGVPVIKIFS 120
           RD+YMS+TLL VAKEH SVVAVVGKGHLSGIKKNWQQPVTL+DLLEMP QK VPV+KIF+
Sbjct: 334 RDQYMSSTLLRVAKEHHSVVAVVGKGHLSGIKKNWQQPVTLKDLLEMPEQKRVPVVKIFT 393

Query: 121 SIGVAVAGVAIISGVYLACKK 141
           SIGVAVAGVAI+SG+YLACKK
Sbjct: 394 SIGVAVAGVAIVSGIYLACKK 414

[Close]
BLAST of Cucsat.G4856 vs. TAIR 10
Match: AT1G05270.1 (TraB family protein )

HSP 1 Score: 198.0 bits (502), Expect = 5.2e-51
Identity = 96/142 (67.61%), Postives = 121/142 (85.21%), Query Frame = 0 

Query: 1   MPLWHKIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEFPTLMDTLVHE 60
           MPLWHK+K LYS +FQA FLP  EEL KMLKDMD+VDM+TL+IQEMSKEFPTLMDT+VHE
Sbjct: 230 MPLWHKVKFLYSILFQAVFLPGAEELEKMLKDMDNVDMVTLVIQEMSKEFPTLMDTIVHE 289

Query: 61  RDRYMSTTLLGVAKEHQSVVAVVGKGHLSGIKKNWQQPVTLEDLLEMPPQKGVPVIK-IF 120
           RD+YM+++LL VA +H SVVAV+GKGH++GIKKNW+QP+T+ DL+E+P  K V  +K I 
Sbjct: 290 RDQYMASSLLRVASDHSSVVAVIGKGHINGIKKNWKQPITMNDLMEIPSDKSVFTLKRII 349

Query: 121 SSIGVAVAGVAIISGVYLACKK 142
           SS+ VAVAG AI+SG+ L+ +K
Sbjct: 350 SSVAVAVAGTAIVSGILLSRRK 371

[Close]
BLAST of Cucsat.G4856 vs. TAIR 10
Match: AT2G32340.1 (TraB family protein )

HSP 1 Score: 174.5 bits (441), Expect = 6.1e-44
Identity = 88/139 (63.31%), Postives = 109/139 (78.42%), Query Frame = 0 

Query: 1   MPLWHKIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEFPTLMDTLVHE 60
           MPLWHKIKL+YS V QA FLP+P+EL KMLKD+ D DMLTL IQEMS EFPTLM+TLVHE
Sbjct: 221 MPLWHKIKLVYSIVSQAVFLPNPKELEKMLKDLGDGDMLTLAIQEMSTEFPTLMETLVHE 280

Query: 61  RDRYMSTTLLGVAKEHQSVVAVVGKGHLSGIKKNWQQPVTLEDLLEMPPQKGVPVIK-IF 120
           RD+YM+  LL +A EH SVVAVVG+GHL GIKKNW Q + +++L+E+P  + +  +K I 
Sbjct: 281 RDKYMAYQLLRIASEHSSVVAVVGRGHLQGIKKNWNQTINIKELMELPTNESIFTVKNIL 340

Query: 121 SSIGVAVAGVAIISGVYLA 139
             + V V G AI+SG+YLA
Sbjct: 341 KYMVVVVVGTAIVSGMYLA 359

The following BLAST results are available for this feature:
BLAST of Cucsat.G4856 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q58DF31.2e-0730.65TraB domain-containing protein OS=Bos taurus OX=9913 GN=TRABD PE=2 SV=1[more]
Q99JY42.6e-0729.84TraB domain-containing protein OS=Mus musculus OX=10090 GN=Trabd PE=1 SV=1[more]
Q9H4I35.8e-0729.03TraB domain-containing protein OS=Homo sapiens OX=9606 GN=TRABD PE=1 SV=1[more]
Q587602.1e-0427.64Uncharacterized protein MJ1365 OS=Methanocaldococcus jannaschii (strain ATCC 430... [more]
BLAST of Cucsat.G4856 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004151877.12.58e-8798.58traB domain-containing protein [Cucumis sativus][more]
KAE8652300.12.58e-8798.58hypothetical protein Csa_022184 [Cucumis sativus][more]
KAA0042435.11.75e-8295.04traB domain-containing protein [Cucumis melo var. makuwa][more]
KAG7034961.12.22e-8289.36TraB domain-containing protein [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_008455837.13.51e-8294.33PREDICTED: traB domain-containing protein [Cucumis melo][more]
BLAST of Cucsat.G4856 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LTA71.25e-8798.58Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G422020 PE=4 SV=1[more]
A0A5A7TLX08.49e-8395.04TraB domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s... [more]
A0A5D3BJE91.70e-8294.33TraB domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A1S3C3381.70e-8294.33traB domain-containing protein OS=Cucumis melo OX=3656 GN=LOC103495939 PE=4 SV=1[more]
A0A6J1CGW11.88e-8191.49traB domain-containing protein OS=Momordica charantia OX=3673 GN=LOC111011104 PE... [more]
BLAST of Cucsat.G4856 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G05270.15.2e-5167.61TraB family protein [more]
AT2G32340.16.1e-4463.31TraB family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002816TraB/PrgY/GumN familyPFAMPF01963TraBcoord: 8..121
e-value: 1.2E-19
score: 71.3
NoneNo IPR availablePANTHERPTHR21530PHEROMONE SHUTDOWN PROTEINcoord: 1..165
NoneNo IPR availablePANTHERPTHR21530:SF7TRAB FAMILY PROTEINcoord: 1..165
NoneNo IPR availableCDDcd14726TraB_PrgY-likecoord: 1..119
e-value: 1.30009E-31
score: 109.97

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G4856.T2Cucsat.G4856.T2mRNA
Cucsat.G4856.T3Cucsat.G4856.T3mRNA
Cucsat.G4856.T1Cucsat.G4856.T1mRNA
Cucsat.G4856.T6Cucsat.G4856.T6mRNA
Cucsat.G4856.T7Cucsat.G4856.T7mRNA
Cucsat.G4856.T4Cucsat.G4856.T4mRNA
Cucsat.G4856.T5Cucsat.G4856.T5mRNA
Cucsat.G4856.T10Cucsat.G4856.T10mRNA
Cucsat.G4856.T11Cucsat.G4856.T11mRNA
Cucsat.G4856.T12Cucsat.G4856.T12mRNA
Cucsat.G4856.T14Cucsat.G4856.T14mRNA
Cucsat.G4856.T8Cucsat.G4856.T8mRNA
Cucsat.G4856.T9Cucsat.G4856.T9mRNA
Cucsat.G4856.T13Cucsat.G4856.T13mRNA
Cucsat.G4856.T15Cucsat.G4856.T15mRNA
Cucsat.G4856.T16Cucsat.G4856.T16mRNA
Cucsat.G4856.T17Cucsat.G4856.T17mRNA
Cucsat.G4856.T18Cucsat.G4856.T18mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0031307 integral component of mitochondrial outer membrane