Cucsat.G4856.T8 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G4856.T8
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	TraB domain-containing protein
Location	ctg1227: 5187188 .. 5191002 (+)
RNA-Seq Expression	Cucsat.G4856.T8
Synteny	Cucsat.G4856.T8

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTAAGAAGGGAAAGGCGAGGTGTATGAATCGATTAACTCGTTGTGCAACTCAGCTCAACTTGACCGAGTCACACCGGTTCATCGTAACAGCCACCGTCAAACCTCATCGCCGGCGTCTCAATTATGCCCTAACTTTCAAACCGCACCGGCATTTTTCAGCTCCATTCGATTTCGGGATTTTCTTCTCCCAAAACTCTGACCGTCCTCGGCGTCTACCCCGTTTGCCTCAGGTGATGGACCCGGTTCCTCCGGAATCTGATTCCCCTGCCGTTGAAGATTTTGTCCACATCGAGGACCCTAACATCGAGAGTTTGTGCGAGAGTATTGTTAGTACTACTGATGAACAGATCAACGACGAGGCAGCCTCTGTGATTTCCCCTGAGGCCGAGGAGGGTTTGGCGGAGCAGAGGAGAGTACTACCGGAGGAGCTTTCTAGAAGCGTGTTGGTATTGACTTGCGAGACCACTGGTGAAGGTGGCATTTGTGACGTATACCTAGTTGGAACGGCACACGTTTCTCAAGTAACTTCTTGATTTTCGATTGTGATAAATTGTCTTGTATTTGTGGCATTTGGTTCTTGAAATTTTGGAGGATATGGGGTGAAAAAGTATCGATTACAGTGAGAGTTCTTAACCCTTTCCGAATTTATTTGATTGAGGAATTCGAGTTAGAACTGAAGTAGATCACTTTTATGGATGCAGGAATCGTGCAGAGAAGTTCAAGCTGTAATCAGTTATTTGAAACCTCAGGCACTTCCTCTTTTTTGAATCTCGATTGTTTTAGATGGTTTGTTTTGCAGGCTATTTTCCTTCTTTCATGTGTTTACAATGTTGCTTGTGCGTTTGCTTATGTGAATGCAGGTCGTCTTCTTGGAGCTATGCGCAAGCCGAGTGGCAGTCCTCACCCCTCAGAATTTGAAGGTGGTGTTGTAATTTGTTTATAGAGATAATTTCAAATTCAAGCAAATAGCTTGTTGATTGAAGTTCACATTTTTTTTCTTTTTTTTTTCTTTTTAAGTTGCTTTGAACATGAAGTCTTGAACTATTACAAATTATGATTGCTGGTTAAAATCGATTACACAAATTCAGTGCCATACAGCATATGTGTCTCTTTTATCCCTCAATTTTTGCTCTCCCTGACCCTTAGTTCTTCAGGTTCCAACTATGGGAGAAATGGTTGAAATGTGGAAGAAAAAGCATAACATCTTTGGTATACTTTACAGTTGGTTTCTTGCGAAGGCAAGTTCTTTTTAGTTTTCTGTAGGTTTTATAGTGCATTTTTTGTTTTGTTTTTTTTGACAATTTTATTTGAAAGATTGCCTCTAATTTTACTTCCTTACTTTTATCTTAGGTAGCCAACAAACTCGAAGTATTCCCTGGTTCAGAGTTTCGTGTAGCCTATGAAGAAGCAATGAAGTATCGTGGTAAGGTAATTCTTGGTGATCGTCCAGTGCAGGTATGATCTCTTTCTCTCTCTCTCTTAAAGATTAAAACTTTTTCTTTTTTAAATAGAGCCTGTGATAGGATTTCTTGAACAAATATCTATTCTCATAACCTTTCTTACACAATTATATTTGCTTCAAAATCAATATGATTGTCTCAACTACCCTTCTTGAGAACTTATTCTGAAAAAGTGTCTGCTGTGGGATAAGTCTGTTCACCGGGTACGGTCGGCTGGTGTCAAGCCTCAAACGTACTTGAGAGCTTTTAATTGTTTTCCGATGTGATATTCACCTTAAAGGTGCTTTACATTCTGTTGGCCCTGACATCCACATGTGCATTCTATTGTGTGCTTTGATTGGTCCTGGATTAGTTTGAACGTATATTCATTTGCTACATGTGCCACTGCTCAATTTACATCACATCCTATTACTATTGTATTTTTCCTGTGTTAGTTTTTGAGCATACCTTTTGATTTGTATCCTTACCATTCTTTTTCTGTCTTTTGATCATGTTAATTTGCAACAAATAACCTTAATCCTCAATGAGGTGACATTTAGTTTGTCATTTTAATATAGCTGAACATACTGTAATATTTTGACGTTTACTCAACAGATTACAATTAGAAGAGCATGGGCGAAAATGCCCCTTTGGCATAAGATAAAATTGCTTTATTCCTTCGTTTTTCAAGCATTCTTTTTGCCAAGCCCCGAGGAATTAACCAAGATGGTATAATTTCATTAACTCTCTCTTTATCCTCACAGGAGAGGATTTTTCTCTATTTTTCTGTTTAATTGTGAGACAAATTGAAACGATTTGCTGTACTAATGCTATTTCTATCTTCAGTTGAAGGATATGGACGATGTTGACATGCTCACGCTCATAATTCAAGAAATGAGCAAGGAATTTCCCACATTAATGGACACTCTTGTGCACGAGCGAGATCGGTTAGTACATTTACCTTTGTGCTGTGTGAAGGCCATTGCGTTTTTCCTCTTTCAATGTGTTTTCTTTATTCAAATAGGAAGAAGTTTAGGAACTATTTGCAGTTGACTTTTTTTTTTATGACAAAATCTTTATTCTTTTCTTTCTGTGCAGTAAATACATGTTTGCATAACATTTTTTTTCTTTTTTAAAAAATAATAAATAAGTTTTCTTTTCTTTTTTTCCATTGGTTATTTTCCAATAGATTTAACAAGTTTTTTTTTCTCACTTTGACACCCAAATGTTGTCTTGTGAGATTAGTCGAAGTGTCCATAGGCTGATCCAAGATAATAATATTGTGTTTTCCTCCTGACGTATACTTCGTGGAATTATAAGATGATTCTTCAAAGGATTGGCAACACTTTGGAAAGTCCTAACTTCATAAATTAAAATCAGTTTTCTGCTCAACAATGTGTTCTGATTTCATGTTATATCCATCATTGTTGCACAATAGTTTTTTATCTTCCATTCGTGTTCTTGACTCACCCATATGTCTATAACTGTTTCAGGTACATGTCAACAACGTTACTAGGAGTAGCCAAGGAGCATCAATCGGTCGTTGCAGTTGTGGGGAAAGGTCATCTAAGTGGAATTAAGAAGAATTGGCAGCAGCCTGTTACTGTAGGTTTCACTCTCCCATTTCTTGAGAAATTTGATTGGTATTCCCTCTCTTCTCTTTACACAAGTATACATTTTCTTAAAATTGCAGCTCGAGGATCTTTTGGAAATGCCTCCCCAAAAAGGAGTCCCTGTCATCAAGATCTTTTCGTCAATAGGTGTTGCAGTTGCTGGAGTTGCCATCATATCAGGTGTTTACCTTGCATGCAAAAAATAACACTATTGAAACTCACCTCAAAGGCTAATCTGATGCAAAGAATGCTCGCTTGATCGTCAAATCTGAAGTTACTATTGGATTAGTTTGTACTTTTTAAACGAGTCCTCCTTGATTGAGGTTTGCCTTCACAGAATGAGTTAACCACAAATAATTTTTTCTCGTTATAGTTTCCTTCCCTTCTCTAGCTGTCTGGTCTAGCAAACTTGGAATCATCACAATGATGAGAAGTTTAACATTAGGCTAATAAAGTTAGAACGATTGAAAGTACTATAGCTACATTTCTTGAAACATTAATATATAATTGTTCAAAACAGAAAAAAGATATTTTTGTCTGCCCAGCTTGTTTGAGACTTCATCAATGAGACAGATTCCAAATGGAATGGCTTGCTAAGGATGCTCTTGTAAGCACTTGGGGCATCTGCATTCGAACCCATAATCTGCAAGTAATGCTCGTCTCTGATCAAATGGTAGATCTTCGTCTATATATGAAATTGTCACCTGAAAAAAATGCACTAATTGCATCAATATATTTTCACACAAGTTTCTTTGTGACTTGT

Coding sequence (CDS)

ATGCCCCTTTGGCATAAGATAAAATTGCTTTATTCCTTCGTTTTTCAAGCATTCTTTTTGCCAAGCCCCGAGGAATTAACCAAGATGTTGAAGGATATGGACGATGTTGACATGCTCACGCTCATAATTCAAGAAATGAGCAAGGAATTTCCCACATTAATGGACACTCTTGTGCACGAGCGAGATCGGTACATGTCAACAACGTTACTAGGAGTAGCCAAGGAGCATCAATCGGTCGTTGCAGTTGTGGGGAAAGGTCATCTAAGTGGAATTAAGAAGAATTGGCAGCAGCCTGTTACTCTCGAGGATCTTTTGGAAATGCCTCCCCAAAAAGGAGTCCCTGTCATCAAGATCTTTTCGTCAATAGGTGTTGCAGTTGCTGGAGTTGCCATCATATCAGGTGTTTACCTTGCATGCAAAAAATAA

Protein sequence

MPLWHKIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEFPTLMDTLVHERDRYMSTTLLGVAKEHQSVVAVVGKGHLSGIKKNWQQPVTLEDLLEMPPQKGVPVIKIFSSIGVAVAGVAIISGVYLACKK

Homology

[Close]

BLAST of Cucsat.G4856.T8 vs. ExPASy Swiss-Prot
Match: Q58DF3 (TraB domain-containing protein OS=Bos taurus OX=9913 GN=TRABD PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.2e-07
Identity = 38/124 (30.65%), Postives = 62/124 (50.00%), Query Frame = 0


Query: 1   MPLWHKIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEFPTLMDTLVHE 60
           + LW K+KL +   F +   P  ++  +  K     D+L  ++ EM  EFP L  T+V E
Sbjct: 204 LSLWQKVKLAWGLCFLSD--PISKDDVERCKQK---DLLEQMMAEMVGEFPDLHRTIVSE 263

Query: 61  RDRYMSTTLLGVAKEHQ---------------SVVAVVGKGHLSGIKKNWQQPVTLEDLL 110
           RD Y++  L   A+  +                VV VVG GH+ GI+KNW   + +++++
Sbjct: 264 RDVYLTYMLRQAARRLELPRASDAEPRKCVPSVVVGVVGMGHVPGIEKNWTTDLNIQEIM 322

[Close]

BLAST of Cucsat.G4856.T8 vs. ExPASy Swiss-Prot
Match: Q99JY4 (TraB domain-containing protein OS=Mus musculus OX=10090 GN=Trabd PE=1 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.6e-07
Identity = 37/124 (29.84%), Postives = 61/124 (49.19%), Query Frame = 0


Query: 1   MPLWHKIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEFPTLMDTLVHE 60
           +  W K+KL +   F +   P  ++  +  K     D+L  ++ EM  EFP L  T+V E
Sbjct: 203 LSFWQKVKLAWGLCFLSD--PISKDDVERCKQK---DLLEQMMAEMIGEFPDLHRTIVSE 262

Query: 61  RDRYMSTTLLGVAKEHQ---------------SVVAVVGKGHLSGIKKNWQQPVTLEDLL 110
           RD Y++  L   A+  +                VV VVG GH+ GI+KNW   + +++++
Sbjct: 263 RDVYLTYMLRQAARRLELPRASDAEPRKCVPSVVVGVVGMGHVPGIEKNWSTDLNIQEIM 321

[Close]

BLAST of Cucsat.G4856.T8 vs. ExPASy Swiss-Prot
Match: Q9H4I3 (TraB domain-containing protein OS=Homo sapiens OX=9606 GN=TRABD PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 5.8e-07
Identity = 36/124 (29.03%), Postives = 61/124 (49.19%), Query Frame = 0


Query: 1   MPLWHKIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEFPTLMDTLVHE 60
           +  W K++L +   F +   P  ++  +  K     D+L  ++ EM  EFP L  T+V E
Sbjct: 204 LSFWQKVRLAWGLCFLSD--PISKDDVERCKQK---DLLEQMMAEMIGEFPDLHRTIVSE 263

Query: 61  RDRYMSTTLLGVAKEHQ---------------SVVAVVGKGHLSGIKKNWQQPVTLEDLL 110
           RD Y++  L   A+  +                VV VVG GH+ GI+KNW   + +++++
Sbjct: 264 RDVYLTYMLRQAARRLELPRASDAEPRKCVPSVVVGVVGMGHVPGIEKNWSTDLNIQEIM 322

[Close]

BLAST of Cucsat.G4856.T8 vs. ExPASy Swiss-Prot
Match: Q58760 (Uncharacterized protein MJ1365 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ1365 PE=4 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 2.1e-04
Identity = 34/123 (27.64%), Postives = 65/123 (52.85%), Query Frame = 0


Query: 22  SPEELTKMLKDMDDVDMLTLIIQEMSKEFPTLMDTLVHERDRYMSTTLLGVAKEHQSVVA 81
           +PE+  K+LK++                 PT+ + LV ERDR+M+  L  ++K   S+VA
Sbjct: 171 NPEKFIKLLKEIS----------------PTIYEVLVDERDRFMAKRLFELSKNKNSLVA 230

Query: 82  VVGKGHLSGIKKNWQQ-----PVTLEDLLEMPPQKGVPVIKIFSSIGVAVAGVAIISGVY 140
           VVG GH+ GI +  ++      + L +L+++  +K    +K   + G+++  ++I   +Y
Sbjct: 231 VVGAGHVEGIVRYLKKLENGNDIDLMELIKVKKRK--KSLKKLLTYGISLTIISIF--LY 273

[Close]

BLAST of Cucsat.G4856.T8 vs. NCBI nr
Match: XP_004151877.1 (traB domain-containing protein [Cucumis sativus])

HSP 1 Score: 270 bits (691), Expect = 2.58e-87
Identity = 139/141 (98.58%), Postives = 140/141 (99.29%), Query Frame = 0


Query: 1   MPLWHKIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEFPTLMDTLVHE 60
           MPLWHKIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEFPTLMDTLVHE
Sbjct: 275 MPLWHKIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEFPTLMDTLVHE 334

Query: 61  RDRYMSTTLLGVAKEHQSVVAVVGKGHLSGIKKNWQQPVTLEDLLEMPPQKGVPVIKIFS 120
           RDRYMSTTLLGVAKEHQSVVAVVGKGHLSGIKKNWQQPVTLEDLLEMP QKGVPV+KIFS
Sbjct: 335 RDRYMSTTLLGVAKEHQSVVAVVGKGHLSGIKKNWQQPVTLEDLLEMPTQKGVPVVKIFS 394

Query: 121 SIGVAVAGVAIISGVYLACKK 141
           SIGVAVAGVAIISGVYLACKK
Sbjct: 395 SIGVAVAGVAIISGVYLACKK 415

[Close]

BLAST of Cucsat.G4856.T8 vs. NCBI nr
Match: KAE8652300.1 (hypothetical protein Csa_022184 [Cucumis sativus])

HSP 1 Score: 270 bits (691), Expect = 2.58e-87
Identity = 139/141 (98.58%), Postives = 140/141 (99.29%), Query Frame = 0


Query: 1   MPLWHKIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEFPTLMDTLVHE 60
           MPLWHKIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEFPTLMDTLVHE
Sbjct: 275 MPLWHKIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEFPTLMDTLVHE 334

Query: 61  RDRYMSTTLLGVAKEHQSVVAVVGKGHLSGIKKNWQQPVTLEDLLEMPPQKGVPVIKIFS 120
           RDRYMSTTLLGVAKEHQSVVAVVGKGHLSGIKKNWQQPVTLEDLLEMP QKGVPV+KIFS
Sbjct: 335 RDRYMSTTLLGVAKEHQSVVAVVGKGHLSGIKKNWQQPVTLEDLLEMPTQKGVPVVKIFS 394

Query: 121 SIGVAVAGVAIISGVYLACKK 141
           SIGVAVAGVAIISGVYLACKK
Sbjct: 395 SIGVAVAGVAIISGVYLACKK 415

[Close]

BLAST of Cucsat.G4856.T8 vs. NCBI nr
Match: KAA0042435.1 (traB domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 258 bits (659), Expect = 1.75e-82
Identity = 134/141 (95.04%), Postives = 138/141 (97.87%), Query Frame = 0


Query: 1   MPLWHKIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEFPTLMDTLVHE 60
           MPL  KIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKE+PTLMDTLVHE
Sbjct: 275 MPLCQKIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEYPTLMDTLVHE 334

Query: 61  RDRYMSTTLLGVAKEHQSVVAVVGKGHLSGIKKNWQQPVTLEDLLEMPPQKGVPVIKIFS 120
           RD+YMSTTLLGVAKEHQSVVAVVGKGHLSGIKKNWQQPVTLEDLLEMPPQK VPV+KIF+
Sbjct: 335 RDQYMSTTLLGVAKEHQSVVAVVGKGHLSGIKKNWQQPVTLEDLLEMPPQKRVPVLKIFT 394

Query: 121 SIGVAVAGVAIISGVYLACKK 141
           SIGVAVAGVAIISGVYLACKK
Sbjct: 395 SIGVAVAGVAIISGVYLACKK 415

[Close]

BLAST of Cucsat.G4856.T8 vs. NCBI nr
Match: KAG7034961.1 (TraB domain-containing protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 251 bits (640), Expect = 2.22e-82
Identity = 126/141 (89.36%), Postives = 136/141 (96.45%), Query Frame = 0


Query: 1   MPLWHKIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEFPTLMDTLVHE 60
           MPLWHKIKLLYSFVFQAFFLP PEELTKMLKDMDDVDMLTLIIQEMSKEFPTLMDTLVHE
Sbjct: 70  MPLWHKIKLLYSFVFQAFFLPGPEELTKMLKDMDDVDMLTLIIQEMSKEFPTLMDTLVHE 129

Query: 61  RDRYMSTTLLGVAKEHQSVVAVVGKGHLSGIKKNWQQPVTLEDLLEMPPQKGVPVIKIFS 120
           RD+YMSTTLL VAKEH+SVVAVVGKGHL+GIKKNWQQPV L+DLLEMP QK VPV+KIF+
Sbjct: 130 RDQYMSTTLLRVAKEHRSVVAVVGKGHLNGIKKNWQQPVKLKDLLEMPEQKRVPVVKIFT 189

Query: 121 SIGVAVAGVAIISGVYLACKK 141
           S+G+AVAGVAIISG+YLAC+K
Sbjct: 190 SLGIAVAGVAIISGIYLACRK 210

[Close]

BLAST of Cucsat.G4856.T8 vs. NCBI nr
Match: XP_008455837.1 (PREDICTED: traB domain-containing protein [Cucumis melo])

HSP 1 Score: 257 bits (657), Expect = 3.51e-82
Identity = 133/141 (94.33%), Postives = 138/141 (97.87%), Query Frame = 0


Query: 1   MPLWHKIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEFPTLMDTLVHE 60
           MPL  KIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKE+PTLMDTLVHE
Sbjct: 275 MPLCKKIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEYPTLMDTLVHE 334

Query: 61  RDRYMSTTLLGVAKEHQSVVAVVGKGHLSGIKKNWQQPVTLEDLLEMPPQKGVPVIKIFS 120
           RD+YMSTTLLGVAKEHQSVVAVVGKGHLSGIKKNWQQPVTLEDLLEMPPQK VPV+KIF+
Sbjct: 335 RDQYMSTTLLGVAKEHQSVVAVVGKGHLSGIKKNWQQPVTLEDLLEMPPQKRVPVLKIFT 394

Query: 121 SIGVAVAGVAIISGVYLACKK 141
           SIGVAVAGVAI+SGVYLACKK
Sbjct: 395 SIGVAVAGVAIVSGVYLACKK 415

[Close]

BLAST of Cucsat.G4856.T8 vs. ExPASy TrEMBL
Match: A0A0A0LTA7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G422020 PE=4 SV=1)

HSP 1 Score: 270 bits (691), Expect = 1.25e-87
Identity = 139/141 (98.58%), Postives = 140/141 (99.29%), Query Frame = 0


Query: 1   MPLWHKIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEFPTLMDTLVHE 60
           MPLWHKIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEFPTLMDTLVHE
Sbjct: 275 MPLWHKIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEFPTLMDTLVHE 334

Query: 61  RDRYMSTTLLGVAKEHQSVVAVVGKGHLSGIKKNWQQPVTLEDLLEMPPQKGVPVIKIFS 120
           RDRYMSTTLLGVAKEHQSVVAVVGKGHLSGIKKNWQQPVTLEDLLEMP QKGVPV+KIFS
Sbjct: 335 RDRYMSTTLLGVAKEHQSVVAVVGKGHLSGIKKNWQQPVTLEDLLEMPTQKGVPVVKIFS 394

Query: 121 SIGVAVAGVAIISGVYLACKK 141
           SIGVAVAGVAIISGVYLACKK
Sbjct: 395 SIGVAVAGVAIISGVYLACKK 415

[Close]

BLAST of Cucsat.G4856.T8 vs. ExPASy TrEMBL
Match: A0A5A7TLX0 (TraB domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold266G00140 PE=4 SV=1)

HSP 1 Score: 258 bits (659), Expect = 8.49e-83
Identity = 134/141 (95.04%), Postives = 138/141 (97.87%), Query Frame = 0


Query: 1   MPLWHKIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEFPTLMDTLVHE 60
           MPL  KIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKE+PTLMDTLVHE
Sbjct: 275 MPLCQKIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEYPTLMDTLVHE 334

Query: 61  RDRYMSTTLLGVAKEHQSVVAVVGKGHLSGIKKNWQQPVTLEDLLEMPPQKGVPVIKIFS 120
           RD+YMSTTLLGVAKEHQSVVAVVGKGHLSGIKKNWQQPVTLEDLLEMPPQK VPV+KIF+
Sbjct: 335 RDQYMSTTLLGVAKEHQSVVAVVGKGHLSGIKKNWQQPVTLEDLLEMPPQKRVPVLKIFT 394

Query: 121 SIGVAVAGVAIISGVYLACKK 141
           SIGVAVAGVAIISGVYLACKK
Sbjct: 395 SIGVAVAGVAIISGVYLACKK 415

[Close]

BLAST of Cucsat.G4856.T8 vs. ExPASy TrEMBL
Match: A0A5D3BJE9 (TraB domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold232G00240 PE=4 SV=1)

HSP 1 Score: 257 bits (657), Expect = 1.70e-82
Identity = 133/141 (94.33%), Postives = 138/141 (97.87%), Query Frame = 0


Query: 1   MPLWHKIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEFPTLMDTLVHE 60
           MPL  KIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKE+PTLMDTLVHE
Sbjct: 275 MPLCKKIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEYPTLMDTLVHE 334

Query: 61  RDRYMSTTLLGVAKEHQSVVAVVGKGHLSGIKKNWQQPVTLEDLLEMPPQKGVPVIKIFS 120
           RD+YMSTTLLGVAKEHQSVVAVVGKGHLSGIKKNWQQPVTLEDLLEMPPQK VPV+KIF+
Sbjct: 335 RDQYMSTTLLGVAKEHQSVVAVVGKGHLSGIKKNWQQPVTLEDLLEMPPQKRVPVLKIFT 394

Query: 121 SIGVAVAGVAIISGVYLACKK 141
           SIGVAVAGVAI+SGVYLACKK
Sbjct: 395 SIGVAVAGVAIVSGVYLACKK 415

[Close]

BLAST of Cucsat.G4856.T8 vs. ExPASy TrEMBL
Match: A0A1S3C338 (traB domain-containing protein OS=Cucumis melo OX=3656 GN=LOC103495939 PE=4 SV=1)

HSP 1 Score: 257 bits (657), Expect = 1.70e-82
Identity = 133/141 (94.33%), Postives = 138/141 (97.87%), Query Frame = 0


Query: 1   MPLWHKIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEFPTLMDTLVHE 60
           MPL  KIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKE+PTLMDTLVHE
Sbjct: 275 MPLCKKIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEYPTLMDTLVHE 334

Query: 61  RDRYMSTTLLGVAKEHQSVVAVVGKGHLSGIKKNWQQPVTLEDLLEMPPQKGVPVIKIFS 120
           RD+YMSTTLLGVAKEHQSVVAVVGKGHLSGIKKNWQQPVTLEDLLEMPPQK VPV+KIF+
Sbjct: 335 RDQYMSTTLLGVAKEHQSVVAVVGKGHLSGIKKNWQQPVTLEDLLEMPPQKRVPVLKIFT 394

Query: 121 SIGVAVAGVAIISGVYLACKK 141
           SIGVAVAGVAI+SGVYLACKK
Sbjct: 395 SIGVAVAGVAIVSGVYLACKK 415

[Close]

BLAST of Cucsat.G4856.T8 vs. ExPASy TrEMBL
Match: A0A6J1CGW1 (traB domain-containing protein OS=Momordica charantia OX=3673 GN=LOC111011104 PE=4 SV=1)

HSP 1 Score: 254 bits (650), Expect = 1.88e-81
Identity = 129/141 (91.49%), Postives = 137/141 (97.16%), Query Frame = 0


Query: 1   MPLWHKIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEFPTLMDTLVHE 60
           MPLWHKIKLLYSF+FQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEFPTLMDTLVHE
Sbjct: 274 MPLWHKIKLLYSFLFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEFPTLMDTLVHE 333

Query: 61  RDRYMSTTLLGVAKEHQSVVAVVGKGHLSGIKKNWQQPVTLEDLLEMPPQKGVPVIKIFS 120
           RD+YMS+TLL VAKEH SVVAVVGKGHLSGIKKNWQQPVTL+DLLEMP QK VPV+KIF+
Sbjct: 334 RDQYMSSTLLRVAKEHHSVVAVVGKGHLSGIKKNWQQPVTLKDLLEMPEQKRVPVVKIFT 393

Query: 121 SIGVAVAGVAIISGVYLACKK 141
           SIGVAVAGVAI+SG+YLACKK
Sbjct: 394 SIGVAVAGVAIVSGIYLACKK 414

[Close]

BLAST of Cucsat.G4856.T8 vs. TAIR 10
Match: AT1G05270.1 (TraB family protein )

HSP 1 Score: 198.0 bits (502), Expect = 5.2e-51
Identity = 96/142 (67.61%), Postives = 121/142 (85.21%), Query Frame = 0


Query: 1   MPLWHKIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEFPTLMDTLVHE 60
           MPLWHK+K LYS +FQA FLP  EEL KMLKDMD+VDM+TL+IQEMSKEFPTLMDT+VHE
Sbjct: 230 MPLWHKVKFLYSILFQAVFLPGAEELEKMLKDMDNVDMVTLVIQEMSKEFPTLMDTIVHE 289

Query: 61  RDRYMSTTLLGVAKEHQSVVAVVGKGHLSGIKKNWQQPVTLEDLLEMPPQKGVPVIK-IF 120
           RD+YM+++LL VA +H SVVAV+GKGH++GIKKNW+QP+T+ DL+E+P  K V  +K I 
Sbjct: 290 RDQYMASSLLRVASDHSSVVAVIGKGHINGIKKNWKQPITMNDLMEIPSDKSVFTLKRII 349

Query: 121 SSIGVAVAGVAIISGVYLACKK 142
           SS+ VAVAG AI+SG+ L+ +K
Sbjct: 350 SSVAVAVAGTAIVSGILLSRRK 371

[Close]

BLAST of Cucsat.G4856.T8 vs. TAIR 10
Match: AT2G32340.1 (TraB family protein )

HSP 1 Score: 174.5 bits (441), Expect = 6.1e-44
Identity = 88/139 (63.31%), Postives = 109/139 (78.42%), Query Frame = 0


Query: 1   MPLWHKIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEFPTLMDTLVHE 60
           MPLWHKIKL+YS V QA FLP+P+EL KMLKD+ D DMLTL IQEMS EFPTLM+TLVHE
Sbjct: 221 MPLWHKIKLVYSIVSQAVFLPNPKELEKMLKDLGDGDMLTLAIQEMSTEFPTLMETLVHE 280

Query: 61  RDRYMSTTLLGVAKEHQSVVAVVGKGHLSGIKKNWQQPVTLEDLLEMPPQKGVPVIK-IF 120
           RD+YM+  LL +A EH SVVAVVG+GHL GIKKNW Q + +++L+E+P  + +  +K I 
Sbjct: 281 RDKYMAYQLLRIASEHSSVVAVVGRGHLQGIKKNWNQTINIKELMELPTNESIFTVKNIL 340

Query: 121 SSIGVAVAGVAIISGVYLA 139
             + V V G AI+SG+YLA
Sbjct: 341 KYMVVVVVGTAIVSGMYLA 359

The following BLAST results are available for this feature:

BLAST of Cucsat.G4856.T8 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q58DF3	1.2e-07	30.65	TraB domain-containing protein OS=Bos taurus OX=9913 GN=TRABD PE=2 SV=1	[more]
Q99JY4	2.6e-07	29.84	TraB domain-containing protein OS=Mus musculus OX=10090 GN=Trabd PE=1 SV=1	[more]
Q9H4I3	5.8e-07	29.03	TraB domain-containing protein OS=Homo sapiens OX=9606 GN=TRABD PE=1 SV=1	[more]
Q58760	2.1e-04	27.64	Uncharacterized protein MJ1365 OS=Methanocaldococcus jannaschii (strain ATCC 430...	[more]

BLAST of Cucsat.G4856.T8 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004151877.1	2.58e-87	98.58	traB domain-containing protein [Cucumis sativus]	[more]
KAE8652300.1	2.58e-87	98.58	hypothetical protein Csa_022184 [Cucumis sativus]	[more]
KAA0042435.1	1.75e-82	95.04	traB domain-containing protein [Cucumis melo var. makuwa]	[more]
KAG7034961.1	2.22e-82	89.36	TraB domain-containing protein [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_008455837.1	3.51e-82	94.33	PREDICTED: traB domain-containing protein [Cucumis melo]	[more]

BLAST of Cucsat.G4856.T8 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LTA7	1.25e-87	98.58	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G422020 PE=4 SV=1	[more]
A0A5A7TLX0	8.49e-83	95.04	TraB domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A5D3BJE9	1.70e-82	94.33	TraB domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3C338	1.70e-82	94.33	traB domain-containing protein OS=Cucumis melo OX=3656 GN=LOC103495939 PE=4 SV=1	[more]
A0A6J1CGW1	1.88e-81	91.49	traB domain-containing protein OS=Momordica charantia OX=3673 GN=LOC111011104 PE...	[more]

BLAST of Cucsat.G4856.T8 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G05270.1	5.2e-51	67.61	TraB family protein	[more]
AT2G32340.1	6.1e-44	63.31	TraB family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002816	TraB/PrgY/GumN family	PFAM	PF01963	TraB	coord: 23..97 e-value: 1.4E-14 score: 54.6
None	No IPR available	PANTHER	PTHR21530	PHEROMONE SHUTDOWN PROTEIN	coord: 1..141
None	No IPR available	PANTHER	PTHR21530:SF7	TRAB FAMILY PROTEIN	coord: 1..141
None	No IPR available	CDD	cd14726	TraB_PrgY-like	coord: 37..95 e-value: 4.16979E-25 score: 92.2505

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G4856	Cucsat.G4856	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G4856.T8.E1	Cucsat.G4856.T8.E1	exon
Cucsat.G4856.T8.E2	Cucsat.G4856.T8.E2	exon
Cucsat.G4856.T8.E3	Cucsat.G4856.T8.E3	exon
Cucsat.G4856.T8.E4	Cucsat.G4856.T8.E4	exon
Cucsat.G4856.T8.E5	Cucsat.G4856.T8.E5	exon
Cucsat.G4856.T8.E6	Cucsat.G4856.T8.E6	exon
Cucsat.G4856.T8.E7	Cucsat.G4856.T8.E7	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G4856.T8.C1	Cucsat.G4856.T8.C1	CDS
Cucsat.G4856.T8.C2	Cucsat.G4856.T8.C2	CDS
Cucsat.G4856.T8.C3	Cucsat.G4856.T8.C3	CDS
Cucsat.G4856.T8.C4	Cucsat.G4856.T8.C4	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G4856.T8	Cucsat.G4856.T8-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0031307	integral component of mitochondrial outer membrane