Cucsat.G4423 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G4423
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	neurochondrin homolog isoform X1
Location	ctg1173: 870163 .. 873536 (+)
RNA-Seq Expression	Cucsat.G4423
Synteny	Cucsat.G4423

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTGTTTAAATCATCTTCCTCTCAGACCCTCACTCTGCCAACCAGACCATTAGACGAACAACCACTGTCGATCTTTGAAAATGCCCCGACTATCTCCCAACATCATCCGTCACTGCCAATCGTCGCCTACAGTTTGTCTCTGGAACCAAATGCCCGCCGTCGAAGACATTTTCTAAGGTTAGGTTTTGTTGTTTTCTCTGATTCTTCTTCTTCTTTCTTCTCATTTCTTTCTTTTGCTTTTCTGTTTATGTATTAAAACTTTTTTTATGAGGAGATTGTATCAATAGAAATTAAAGATCCGATCACTATTTGCACTTCTCCTTTGACGTCTTTACACATTAGGGTGTTAAAATAAAGTAGTTATTATCAAGACAAAATTTGTTAACATACTGAAGATTGGAGGTTAACTGTGGAGCATGGTAGAGTTTGGAGAGATTAAAAGAGTTTAAACAAGTTGAAAAGGTACCACTACTATTGTGGTATTCAAGGGATGACCATTGTCGACAGTATCCATCTCCTCACCATTATAATGGTTGTATAACTTAAGAGCCAAAAATTACCATTAGGGAGAGAATTACGTGAATACATTATATTGGTAGCCATATGTCAGGATTCTAACACACTTTCTAATAAAACACCCAACAATGGCTAAATAGAGACAACACCCTGTGATTCTTTATTTATATATAGCCAAAAGATACAGCTACAATATGAAATGAAAGTAAGAACAGTAAATAACAAGAGCATACCAGCATCCTTTACAAGAAGGATACCTCCTCCCCTTTACGGCTGCTGCCGCCATTCTTTACCCTATAGAAAACAAAAAGATACCCCTCCCTATTTCCCAATCATTCTATTTATAATCACCCTCAAATTCCTACTCAGTAGGACCCACCTGCACATTCTCTTACTTCCCACTCATTCTCTCTCATTACTTGTTGGTGAATTTCCCTTCTTACCCTTCCTAACATACGTATGTATGATTGGGGGTCTCACAACACCCCTCGGTTCCAAATTCACCTTGTCCTCAAGGTGGAATGTGGGAAACTGTTGATTCATTTGATAGACAGCTTCCCATGTGGCTTCAGTTTCTGGTAAATTCTTCCACTTGACTAGCCATTCGTTAGCTCCCAAATCTTTATTCCAGCGAATTCCCAATACCTGTTATGGCCATAGTTGTAACTCGAAATCTGTTGTCAACATAGGTTGTTGTTGCTGCACAACATTCTGCTTACCTAACTTGAGCTTCAACTGCGAGATGTGGAACACATCATGAATAATCGCCTCTCGTGGAAGTTTCAATCTATATGCCACCTCTCCTATCTCTTCAATGATTGTGTAAGGCCCATAGAATTTTGGTGCCAGCTGTTCACATCTTTTCCGAGCTAAGGATCTCTGCCTATAAGGTCTGAGCTTTAGGTATACTTCATCACCCACCTTGAACTTCAACTCCCTTCTTTTGGTGTCTGCCCATTTCTTCATGCGGTTTTGGGCTAAGTGAAGATTCTTCTTCAAGGCGTTCAATGCCAAATCTCTCTCTTTTAGCATTACTTCTACCTCATCATTCTGAGTTTTTCGGGTTTCGTAGGATAAAATAGGGGGTGGTTGTCTACCATATACAATCTTGAAAGGGTTGGAACGTATGGATGAATGGAAAGTGGTGTTATACCACAGTTCAGCCCATGGAATGAACTTATGCCACTTTTGAGGTTGCTCATTGCAGAAGCATCTCAAGTATGTCTCTAGACATTGGTTTACCCTTTCCGTCTGCCCATCCGTTTGTGGGTGAAATGCGTGCTTCTTTTCAGTTTAGGTCCCATAGTTGCAAATAATTCATTCCAAAAATGACTAATGAAAACTTTATCCCTGTCTGATAATCTTTTCAATGAATGTAGTCGCCACTTGTTTAGTTGTGAAAGGGTGCTTCATAGTAATGAAATAAGCATACTTGCACAATCTATCTACCACCACCATTATCACATTCATTCCCCCTGCCTTAGGTAACCCTTCTAGAAATCCATTGACCATTCTTCTAGTATGGCGTCTGGAGTAGGGATTGGATGTAATACTCTTGCTGGTTTCGTGGCCTCATATTTGTTCCTTTGACAAATCTCACACTGCTCCACATATTTCTTTATATCAGCCTTCATTCCCTCCCAGTACAGCTCCCCACTCATTCTCTTATATGTTCTCAAGAATCCCGAGTGTCCTCCCAAGATCGAGTCATGGAATGTATGCAGCAATGTGGGGATCACTGAAGACTTCTTTGATAATACCACTCTCTTCTTGTAGAACAGTTTCCCATTCTCCCAGCTAAATTTGTTGATTCCCTCTGGATTCTGTTTCAATAAACTTGGTTGAGCTTCCGATAATCTACACAAAAGCGCCACCCTTCATCTTTCTTTTTGACCAATAAAACAGGGCTAGAGTACGGGCTATGACTGGGATGTATCACACCTGCTTGCAACATTTCCACCACCAATTTCTCAATTTCCTCCTTCTGTACATAACCATATTTATATGGTCTGACATTGATGGGCCTCTGGTTTGGTAAAACCAATATACGGTGATCTATTTCTCTCTTAGAGGGCAACTTTTTTGGATCCTCAAAGATGTCTGCATACTGTTGTAACAGATTTTTAATCATTGGGATCTCTTCTTCGTCCCCTTTCATTGCCTGCTCCACTTCCACCTCAGTGTCTATTTCATACTTTTGGAATTCCAACAGAAAACCCTGATCTTCATTTTCCCACGTTTTCTCAATGGTTTTCAGGGAACATTTGCTTGGATGAGGGATGAGTCTCCTTTCAAAATAATTTTCTGTTTTCCTGACCAAAAGGACATTGTTAGGGATGGCCAATGTATCTTCATGGTGCCTGTTGTATCCAGCCACTGCATACCCAATATTACATCCACATGTCCCAACTCAATTGCTAAAAAATTAGCCACCACCACAACCCCTTGTAGCTCCAATTCCACTCTCTTGCAAATACCCTTGCCTGTACACTTAGTGCCATCTCCAATTGTAACTGCAAACGGATTACCTTTTTCCAAGTATAGGTTCTTTTCCTTTACTGTCCAGTTATGTATAAAATTATGGGTTGCTCCACTATCAATCAGCACTATCACTCCTTTGCCCTTTATATTTCCCTTCAGCTTCATCGTTCCCTTCGATGCCATCCCATGGATTGTTTTCAATTCTATTTCCTCTCCTTCTGCAAAATCCAGAAGGTTTAGTTCCACTGTTTCCCCTGGTTCCTCTTCTATCTTGCCTTCCTCTTCCTTACTCTCCTCTTCATTCATGATAAATAACATCAGCTCCCTTTTTTCCTTCACTCTACATCTGTGCCCCGGCGTATACTTCTCATTGCATTTGCAACATAGGCCCTTATCCAGTCTGGACCTGAATTCTGCGTCTGAAAGTCGTTTGATAGGAGGTTCACTTTTTTTATAACTACTCTTAATAGGTATAGTTACTTGTTTTATGGGGAAATCTGTCTTCCTCATGTAGTCTTTGTCTGTTCCTTCTTGGATTTTTCCTGCATACTCTTCTTTTTTCTTTGGTTCCACTGTCCTACCCTCGGTCTTAGTCAATTTCATTGCTACATTCCGATCATTGACTAGTTGAGCCTCCCTCATACATTCTTCCAATGTTCGAGGGTAACGACTAACGACTTCTGCTTGAAGATTGGGTTCCAGACAGGTCAGAGAAGCATCGCGTAACACACTTTCCTCCATGTGAGGGAGATGAGCTGAATATGTGACAAATTTCTTCACATACTCACTGTAGGATCCATCTTGTTGAATCCTAATCAAGCGTGCCACTAGACTCGTTTGCCTTGAGTCCTTGAAGAAATCAAACATCCTCCCTTTTAAGTCTTTCCATGACTCTACTTTCTTCCTATTATGTGTCCACCGGTACCAGTCCACTTTATCTTGCCCAAAGCTGACCACAGCCACTTTGAACTTCTCATTTTCTGGCAGGTTGTTGATCTCAAAAAAATGTTATGCTCTATATACCCAGGATTCGGGATTTTCACCTAAGAACATAGGCATTTCTAACTTTTTGTACTTACTTCGATCCACATTATTTCCATTTACCTCATTACAGACTTCCGATTCTTCTACTTTTCCTTTCAACTTCATGCTGGATCCATCAGATGTTCCGGATTCATCTCTTTTCTTATAGCTATGATTCTCTCTTAGTTCCTCCGTCAGTCTTTCCATAGACTTCTTCATTTCCAGTAACATTTCTTTCATGCTCAACAACTCCTTCTCAGTTCCTTCCATTCGTTCCTCCAATTGTCTTTGTGCCATGCGACGTGTAACAACACCCAGTTTTTTGTTGTTGTTGGGCTCTGATACCAAATGTCAGGATTCTAACACACTTTCTAATAAAACACCGAACAATGGCTAAACAGAGACATCACCCTGTGATCTTTATTTATATATATAGCCAAAAGATACAACTACAATATGAAATGAAAGTAAGAACAGTAAATAACAAGAGCATACCAGCATCCTTTACAAGAAGGATACCCCCTCCTCTTTACGGCTGCTGCCGCCACTCTTTACCCTAGGGATAACAAAAAGATACCCCTCCCTATTTTCCAATCATTCTATTTATAATCACCCTCAAATTCCTACTCAGTGGGACCCACCTGCACATTCTCTTACTTCCCACTCATTCTCTATCATTACATGTTGGTGAATTTCCCTTCTTACCCTTCCTAACATACGTATGTATGATTGGGGGTCTCACACCATAGTAGCTAGGCAACTGAGTAGAAGGATGTCAACCTTGAAAGGCAATGTTCATACGATTATAATAATCCAACACAATATTTTTGGGAAACTTATTTGTATTGTACTATATGCCCTAGCTGCCAATTTAGTTTCTTTTTAATTATTTCACTAATAATTTTTTGAATACGTGGAAAATTTATTTGTAGGGGGTCTTATCAATGAAAACACACTGATGAAAGTGAATAGAGGGCTTAATGAGACTACTGGGGTTGTGCTAGAATACTTGCAAGATGCAAAGGTAATTATAGAAAAAATTATAGTTGTAGTAGGATATGAGGATATTGTTCCTTATTTAAGATTGTGATTTATGATTCTTCAGGAGTATGGACAAAGAAAAGGAGATGACATTTTAGCATTATTTATACTGGTTATTGGAAGGTAATATATTATATATTTGAAGGTGAAGATGAATAGATGTTTGTCAGCATCCAGTTATTACCTACAATTCGGTTTTTATTTTACGAATCTAAAATACCTGAATTGCATTTCTATATTTACAAACGACGGCCCTTCCAACTCACTGGTTTCTTTGTAATTTTATAAGAATTAGAGAAAGAAGTTAAATGATTCAGCATCCAAGTAAAAGCCTACGAAGATAATTCAAATTTGAACATGTCTGTATGACTTATATGCTCAAAGAAATGTGTAATAACTGTAGGAAAGTTCCAATTCTTTCATTAAATCCATTTCATAGAACTCTTAGTTCATTTTCTTTCCTTCTTTGTTTTTTTTTTTTTTTTTTTTTATCTTTACCTATTATTTTATCTGGTTTAATGTGGTTGAGTGAGCCCACTTTGTAATTGACAAAATATTTTTATTTCAGATTTCTTTGAAGTGGGAATCTCAACCTTAGATTTCTTTGAAGTGGAAATTTTTTTGGTATAAATTACTTTACCCTATTGCACAATTTGAGTATATTCATACTAAAAGATCATCATTCCATGTGACTTTTACTCTTTTCAGTATTTACTAGATGGTTTGGTTCTCTATTGATGGTGGACTTTCCCAGTTTGATGCAATCCTTATTGTTTCATGTTTAAGATAGCTTGGAGTTTCTTTTCCGTATGTACAGATTTTATATACTTCAAAGAATTCTAAGTTCTCTCTTGTTGTGTGAGTGTGAGTTTACTTTTTTGGGGGTGTTCTGGTGGTTCTTGAGCCTAAATACATGTTGAAGTGCTATGACTATTCTGCAGCTATGGTAGACTTTTTCTTAATTTTACTTTATGCGTGCTTAAATGATAATTTTTTCCTAAACGTGTTTTGATAAGGAACATATTTCTGCATGTGAGAAGAAGAAACGTGCTTAAACGTATTTAGGAAACATATTCTTCCTAAACGTGCTTAAATGATAATTTCTTCCTAAATGTGTTTTGATAAGGAACATATTTCTGCATGTTAGAAGAAGAAACATGCTTAAGCGTGTTTAGGAAACATATATTTTTTGTCTACTTATTAGACAACTTTAGCAATTGAGTTTAATTTTTTACAGGAAAATGAATGGTAACCAGTTGGTTGGTACAATTCCTTCTAAACTCGGGAACTTGGATAAGTTGTTTGAACTGTGAGTTACATTTTTTAGTTTCTAATAATTCATTGTTTCAATTCTCTCGCAACAGTGAATAATATAACTACCTTTTTGTCTACAATATATTTATCAAACTTTTGATGCAAATATTTCTTTGCTATATCTAAAAATCTTGTTAATAATTATTTTAAAGGACTTATCTCTCAAAACACATCAGTTCTTGCTCTGCATCAAATCAATTGTAAAATACCCTACTGCCTTCTGTTGAAATTTCATAGGTGACTAAAAATGCTTTGGTAGAATAGTTATAGAATGCCAACTTTCTAAAGCATGACTTCTGCTGTGTAAATAGAAGTGAATCACAACATTCTTGTACCTATGGTTCTATGTAACATTACTTGTGTGAAAGAATTTCGTGCTTTTTAATCAATTTTTGTTACTATATTTTTAAAATTCCTAGATGGATAGTATTTATTCATATTGCCCAATAATACCTCTTTGGTTATTGTGAGTATATGCATTTATATCTTTTCTTAGAAAGACTCCAATATTTTTTAAAAGTATAAGTTCCTGTTCAAGGAACCCTTTTGTTTGGGGGCGTACATCTCGTAATGCATAATTTTTTTGGGATTCTACTTTGGTACGTTATTTGTAATTTTATAATTTGAATCTACTTTGTTGCTTCATATCCAAGTGTTGATTCATATCCCTTTATGTTGCTTTCTTTTATGTTTGTTGGACAATTTAGACGGGATGATTGAATTGAATACTTAAGGGAATTGGGCGGGGGGGGGGGGGGGGGGGGGTGGTTAGTTGTTTTATTATTGTTTTCTTGTGTGTCAATATGTTTTATGGAACTTGCCTGATAATATAGGCTGCCATGTTAGGATAAATAAGGATTGGGGGCTGGAATTGGACAGTTTGCATGAGATCAATTCTCATCCCTCAGTTTGAATTGATTAAGCATGGGGGAGGGGGGAATCAACAACACTCTATTTTGTAATAAGAAGTGGGAATTAACAACACTCTACTTTATAATAAGAAGTGTGCCCTCTTCTTATTCTCCTATAATCTCAGTATTGTTTCTTTTCAATCTTTCATCAATGGGAGTATTGATATATGATCTATTGGCTAAGGACATGTTTTAACCAATTTAGGTTTAACAATAATGTCACAATGTATTTACTTGCTCCTTTGTCCACTAGCCCTTGAGTCAACCCATATATTTTGTATGTGTCATTTTCATTATTTTTTTATTAAGGGCTGGAATTCTATACTTTTCATGTTTTATTTACCTGTAAATTGTTTCAAACTTGATTGAAAATGTTATAATTAAAGCTATGATTATTATTCTTCTCTGTTGCGCGCCATTTTCATTGTGCAACATTCACTATGTCTTAATTAGCTTTAAATAGAACCTTCTTTTAGGTAATGTTCTTTAGTTATACTCTAAAATAAAATTTTGTTTTTCTTACTAGGTTTGGAAGAATCCATTGGAACAATGAAGCCAACTTGGAACAATTGATCGATATAAGACGTTTTGTATGGTTGGTAGCAAAATCTTGGTTCCAATGTACTGAATTTAGGCTTGTTAGTAGATAAAGATGTCAATGTTTATTCTTTTTGTATGTAAACTATCTTTTAACAAAAAATAGTTATTAGTTAATAGGTGTACGAATATTACAAAGTGTATTATTACGTATATATATATTAAAGTGTTGACTCCTTGTTTTCATACGGGTGTGATGTATTGGAATATTATTGGGGAATTGACAAAAATAGGC

Coding sequence (CDS)

ATGAAAGTGAATAGAGGGCTTAATGAGACTACTGGGGTTGTGCTAGAATACTTGCAAGATGCAAAGGAGTATGGACAAAGAAAAGGAGATGACATTTTAGCATTATTTATACTGGTTATTGGAAGGAAAATGAATGGTAACCAGTTGGTTGGTACAATTCCTTCTAAACTCGGGAACTTGGATAAGTTGTTTGAACTGTTTGGAAGAATCCATTGGAACAATGAAGCCAACTTGGAACAATTGATCGATATAAGACGTTTTGTATGGTTGGTAGCAAAATCTTGGTTCCAATGTACTGAATTTAGGCTTGTTAGTAGATAA

Protein sequence

MKVNRGLNETTGVVLEYLQDAKEYGQRKGDDILALFILVIGRKMNGNQLVGTIPSKLGNLDKLFELFGRIHWNNEANLEQLIDIRRFVWLVAKSWFQCTEFRLVSR

Homology

[Close]

BLAST of Cucsat.G4423 vs. NCBI nr
Match: XP_011654484.1 (uncharacterized protein LOC105435406 [Cucumis sativus] >XP_031742282.1 uncharacterized protein LOC105435406 [Cucumis sativus] >XP_031742283.1 uncharacterized protein LOC105435406 [Cucumis sativus] >XP_031742284.1 uncharacterized protein LOC105435406 [Cucumis sativus] >KGN50868.2 hypothetical protein Csa_018392 [Cucumis sativus])

HSP 1 Score: 159 bits (402), Expect = 8.80e-48
Identity = 82/106 (77.36%), Postives = 82/106 (77.36%), Query Frame = 0


Query: 50  MKVNRGLNETTGVVLEYLQDAKEYGQRKGDDILALFILVIGR------------------ 109
           MKVNRGLNETTGVVLEYLQDAKEYGQRKGDDILALFILVIGR                  
Sbjct: 1   MKVNRGLNETTGVVLEYLQDAKEYGQRKGDDILALFILVIGRKMNGNQLVGTIPSKLGNL 60

Query: 110 ------FGRIHWNNEANLEQLIDIRRFVWLVAKSWFQCTEFRLVSR 131
                 FGRIHWNNEANLEQLIDIRRFVWLVAKSWFQCTEFRLVSR
Sbjct: 61  DKLFELFGRIHWNNEANLEQLIDIRRFVWLVAKSWFQCTEFRLVSR 106

[Close]

BLAST of Cucsat.G4423 vs. NCBI nr
Match: XP_008452895.1 (PREDICTED: neurochondrin isoform X4 [Cucumis melo])

HSP 1 Score: 80.9 bits (198), Expect = 9.77e-15
Identity = 50/77 (64.94%), Postives = 57/77 (74.03%), Query Frame = 0


Query: 16  RRMSTLKGNVHTIIIIQHNIFGKLIWGLINENTLMKVNRGLNETTGVVLEYLQDAKEYGQ 75
           R ++T    V  II +  NI G+    LI+ENTLMKV RGLNETTGVVLEYLQDAKE+GQ
Sbjct: 345 RNVATAFSLVEKIIKLISNI-GEEQGDLISENTLMKVIRGLNETTGVVLEYLQDAKEHGQ 404

Query: 76  RKGDDILALFILVIGRF 92
           RKGDDILA  + VIG F
Sbjct: 405 RKGDDILAS-VRVIGSF 419

[Close]

BLAST of Cucsat.G4423 vs. NCBI nr
Match: XP_022976134.1 (neurochondrin homolog isoform X2 [Cucurbita maxima])

HSP 1 Score: 80.9 bits (198), Expect = 1.02e-14
Identity = 51/84 (60.71%), Postives = 61/84 (72.62%), Query Frame = 0


Query: 9   IVARQLSRRMSTLKGNVHTIIIIQHNIFGKLIWGLINENTLMKVNRGLNETTGVVLEYLQ 68
           I+ +Q  R ++T    V  II +  N+ G+    LI+ENTLMKV RGLNETTGVVLEYLQ
Sbjct: 340 IIVKQ--RNVATAFSLVEKIIKLVSNV-GEDQGDLIDENTLMKVFRGLNETTGVVLEYLQ 399

Query: 69  DAKEYGQRKGDDILALFILVIGRF 92
           DAKE+GQRKGDDILA  + VIG F
Sbjct: 400 DAKEHGQRKGDDILAS-VRVIGSF 419

[Close]

BLAST of Cucsat.G4423 vs. NCBI nr
Match: XP_022935921.1 (uncharacterized protein LOC111442684 isoform X2 [Cucurbita moschata])

HSP 1 Score: 80.9 bits (198), Expect = 1.02e-14
Identity = 51/84 (60.71%), Postives = 61/84 (72.62%), Query Frame = 0


Query: 9   IVARQLSRRMSTLKGNVHTIIIIQHNIFGKLIWGLINENTLMKVNRGLNETTGVVLEYLQ 68
           I+ +Q  R ++T    V  II +  N+ G+    LI+ENTLMKV RGLNETTGVVLEYLQ
Sbjct: 340 IIVKQ--RNVATAFSLVEKIIKLVSNV-GEDQGDLIDENTLMKVFRGLNETTGVVLEYLQ 399

Query: 69  DAKEYGQRKGDDILALFILVIGRF 92
           DAKE+GQRKGDDILA  + VIG F
Sbjct: 400 DAKEHGQRKGDDILAS-VRVIGSF 419

[Close]

BLAST of Cucsat.G4423 vs. NCBI nr
Match: XP_022935920.1 (uncharacterized protein LOC111442684 isoform X1 [Cucurbita moschata])

HSP 1 Score: 80.9 bits (198), Expect = 1.02e-14
Identity = 51/84 (60.71%), Postives = 61/84 (72.62%), Query Frame = 0


Query: 9   IVARQLSRRMSTLKGNVHTIIIIQHNIFGKLIWGLINENTLMKVNRGLNETTGVVLEYLQ 68
           I+ +Q  R ++T    V  II +  N+ G+    LI+ENTLMKV RGLNETTGVVLEYLQ
Sbjct: 340 IIVKQ--RNVATAFSLVEKIIKLVSNV-GEDQGDLIDENTLMKVFRGLNETTGVVLEYLQ 399

Query: 69  DAKEYGQRKGDDILALFILVIGRF 92
           DAKE+GQRKGDDILA  + VIG F
Sbjct: 400 DAKEHGQRKGDDILAS-VRVIGSF 419

[Close]

BLAST of Cucsat.G4423 vs. ExPASy TrEMBL
Match: A0A0A0KLC1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G049520 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 2.08e-19
Identity = 42/42 (100.00%), Postives = 42/42 (100.00%), Query Frame = 0


Query: 50 MKVNRGLNETTGVVLEYLQDAKEYGQRKGDDILALFILVIGR 91
          MKVNRGLNETTGVVLEYLQDAKEYGQRKGDDILALFILVIGR
Sbjct: 1  MKVNRGLNETTGVVLEYLQDAKEYGQRKGDDILALFILVIGR 42

[Close]

BLAST of Cucsat.G4423 vs. ExPASy TrEMBL
Match: A0A1S3BUW9 (neurochondrin isoform X4 OS=Cucumis melo OX=3656 GN=LOC103493779 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 4.73e-15
Identity = 50/77 (64.94%), Postives = 57/77 (74.03%), Query Frame = 0


Query: 16  RRMSTLKGNVHTIIIIQHNIFGKLIWGLINENTLMKVNRGLNETTGVVLEYLQDAKEYGQ 75
           R ++T    V  II +  NI G+    LI+ENTLMKV RGLNETTGVVLEYLQDAKE+GQ
Sbjct: 345 RNVATAFSLVEKIIKLISNI-GEEQGDLISENTLMKVIRGLNETTGVVLEYLQDAKEHGQ 404

Query: 76  RKGDDILALFILVIGRF 92
           RKGDDILA  + VIG F
Sbjct: 405 RKGDDILAS-VRVIGSF 419

[Close]

BLAST of Cucsat.G4423 vs. ExPASy TrEMBL
Match: A0A6J1IMN8 (neurochondrin homolog isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111476614 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 4.92e-15
Identity = 51/84 (60.71%), Postives = 61/84 (72.62%), Query Frame = 0


Query: 9   IVARQLSRRMSTLKGNVHTIIIIQHNIFGKLIWGLINENTLMKVNRGLNETTGVVLEYLQ 68
           I+ +Q  R ++T    V  II +  N+ G+    LI+ENTLMKV RGLNETTGVVLEYLQ
Sbjct: 340 IIVKQ--RNVATAFSLVEKIIKLVSNV-GEDQGDLIDENTLMKVFRGLNETTGVVLEYLQ 399

Query: 69  DAKEYGQRKGDDILALFILVIGRF 92
           DAKE+GQRKGDDILA  + VIG F
Sbjct: 400 DAKEHGQRKGDDILAS-VRVIGSF 419

[Close]

BLAST of Cucsat.G4423 vs. ExPASy TrEMBL
Match: A0A6J1F631 (uncharacterized protein LOC111442684 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111442684 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 4.92e-15
Identity = 51/84 (60.71%), Postives = 61/84 (72.62%), Query Frame = 0


Query: 9   IVARQLSRRMSTLKGNVHTIIIIQHNIFGKLIWGLINENTLMKVNRGLNETTGVVLEYLQ 68
           I+ +Q  R ++T    V  II +  N+ G+    LI+ENTLMKV RGLNETTGVVLEYLQ
Sbjct: 340 IIVKQ--RNVATAFSLVEKIIKLVSNV-GEDQGDLIDENTLMKVFRGLNETTGVVLEYLQ 399

Query: 69  DAKEYGQRKGDDILALFILVIGRF 92
           DAKE+GQRKGDDILA  + VIG F
Sbjct: 400 DAKEHGQRKGDDILAS-VRVIGSF 419

[Close]

BLAST of Cucsat.G4423 vs. ExPASy TrEMBL
Match: A0A6J1IL84 (neurochondrin homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111476614 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 4.92e-15
Identity = 51/84 (60.71%), Postives = 61/84 (72.62%), Query Frame = 0


Query: 9   IVARQLSRRMSTLKGNVHTIIIIQHNIFGKLIWGLINENTLMKVNRGLNETTGVVLEYLQ 68
           I+ +Q  R ++T    V  II +  N+ G+    LI+ENTLMKV RGLNETTGVVLEYLQ
Sbjct: 340 IIVKQ--RNVATAFSLVEKIIKLVSNV-GEDQGDLIDENTLMKVFRGLNETTGVVLEYLQ 399

Query: 69  DAKEYGQRKGDDILALFILVIGRF 92
           DAKE+GQRKGDDILA  + VIG F
Sbjct: 400 DAKEHGQRKGDDILAS-VRVIGSF 419

[Close]

BLAST of Cucsat.G4423 vs. TAIR 10
Match: AT4G32050.1 (neurochondrin family protein )

HSP 1 Score: 49.3 bits (116), Expect = 2.8e-06
Identity = 26/50 (52.00%), Postives = 34/50 (68.00%), Query Frame = 0


Query: 43  LINENTLMKVNRGLNETTGVVLEYLQDAKEYGQRKGDDILALFILVIGRF 93
           L +E    KV + LNET G V EYL+DAKE+G +KG D+LA  + VIG +
Sbjct: 366 LSDEAVFQKVIKILNETVGAVFEYLRDAKEHGIKKGTDLLA-SVRVIGSY 414

The following BLAST results are available for this feature:

BLAST of Cucsat.G4423 vs.


Match Name	E-value	Identity	Description

BLAST of Cucsat.G4423 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011654484.1	8.80e-48	77.36	uncharacterized protein LOC105435406 [Cucumis sativus] >XP_031742282.1 uncharact...	[more]
XP_008452895.1	9.77e-15	64.94	PREDICTED: neurochondrin isoform X4 [Cucumis melo]	[more]
XP_022976134.1	1.02e-14	60.71	neurochondrin homolog isoform X2 [Cucurbita maxima]	[more]
XP_022935921.1	1.02e-14	60.71	uncharacterized protein LOC111442684 isoform X2 [Cucurbita moschata]	[more]
XP_022935920.1	1.02e-14	60.71	uncharacterized protein LOC111442684 isoform X1 [Cucurbita moschata]	[more]

BLAST of Cucsat.G4423 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KLC1	2.08e-19	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G049520 PE=4 SV=1	[more]
A0A1S3BUW9	4.73e-15	64.94	neurochondrin isoform X4 OS=Cucumis melo OX=3656 GN=LOC103493779 PE=4 SV=1	[more]
A0A6J1IMN8	4.92e-15	60.71	neurochondrin homolog isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111476614 PE=...	[more]
A0A6J1F631	4.92e-15	60.71	uncharacterized protein LOC111442684 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1IL84	4.92e-15	60.71	neurochondrin homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111476614 PE=...	[more]

BLAST of Cucsat.G4423 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G32050.1	2.8e-06	52.00	neurochondrin family protein	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G4423.T3	Cucsat.G4423.T3	mRNA
Cucsat.G4423.T8	Cucsat.G4423.T8	mRNA
Cucsat.G4423.T16	Cucsat.G4423.T16	mRNA