Cucsat.G4423.T3 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G4423.T3
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	neurochondrin homolog isoform X1
Location	ctg1173: 865541 .. 873658 (+)
RNA-Seq Expression	Cucsat.G4423.T3
Synteny	Cucsat.G4423.T3

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTGTTTAAATCATCTTCCTCTCAGACCCTCACTCTGCCAACCAGACCATTAGACGAACAACCACTGTCGATCTTTGAAAATGCCCCGACTATCTCCCAACATCATCCGTCACTGCCAATCGTCGCCTACAGTTTGTCTCTGGAACCAAATGCCCGCCGTCGAAGACATTTTCTAAGGTTAGGTTTTGTTGTTTTCTCTGATTCTTCTTCTTCTTTCTTCTCATTTCTTTCTTTTGCTTTTCTGTTTATGTATTAAAACTTTTTTTATGAGGAGATTGTATCAATAGAAATTAAAGATCCGATCACTATTTGCACTTCTCCTTTGACGTCTTTACACATTAGGGTGTTAAAATAAAGTAGTTATTATCAAGACAAAATTTGTTAACATACTGAAGATTGGAGGTTAACTGTGGAGCATGGTAGAGTTTGGAGAGATTAAAAGAGTTTAAACAAGTTGAAAAGGTACCACTACTATTGTGGTATTCAAGGGATGACCATTGTCGACAGTATCCATCTCCTCACCATTATAATGGTTGTATAACTTAAGAGCCAAAAATTACCATTAGGGAGAGAATTACGTGAATACATTATATTGGTAGCCATATGTCAGGATTCTAACACACTTTCTAATAAAACACCCAACAATGGCTAAATAGAGACAACACCCTGTGATTCTTTATTTATATATAGCCAAAAGATACAGCTACAATATGAAATGAAAGTAAGAACAGTAAATAACAAGAGCATACCAGCATCCTTTACAAGAAGGATACCTCCTCCCCTTTACGGCTGCTGCCGCCATTCTTTACCCTATAGAAAACAAAAAGATACCCCTCCCTATTTCCCAATCATTCTATTTATAATCACCCTCAAATTCCTACTCAGTAGGACCCACCTGCACATTCTCTTACTTCCCACTCATTCTCTCTCATTACTTGTTGGTGAATTTCCCTTCTTACCCTTCCTAACATACGTATGTATGATTGGGGGTCTCACAACACCCCTCGGTTCCAAATTCACCTTGTCCTCAAGGTGGAATGTGGGAAACTGTTGATTCATTTGATAGACAGCTTCCCATGTGGCTTCAGTTTCTGGTAAATTCTTCCACTTGACTAGCCATTCGTTAGCTCCCAAATCTTTATTCCAGCGAATTCCCAATACCTGTTATGGCCATAGTTGTAACTCGAAATCTGTTGTCAACATAGGTTGTTGTTGCTGCACAACATTCTGCTTACCTAACTTGAGCTTCAACTGCGAGATGTGGAACACATCATGAATAATCGCCTCTCGTGGAAGTTTCAATCTATATGCCACCTCTCCTATCTCTTCAATGATTGTGTAAGGCCCATAGAATTTTGGTGCCAGCTGTTCACATCTTTTCCGAGCTAAGGATCTCTGCCTATAAGGTCTGAGCTTTAGGTATACTTCATCACCCACCTTGAACTTCAACTCCCTTCTTTTGGTGTCTGCCCATTTCTTCATGCGGTTTTGGGCTAAGTGAAGATTCTTCTTCAAGGCGTTCAATGCCAAATCTCTCTCTTTTAGCATTACTTCTACCTCATCATTCTGAGTTTTTCGGGTTTCGTAGGATAAAATAGGGGGTGGTTGTCTACCATATACAATCTTGAAAGGGTTGGAACGTATGGATGAATGGAAAGTGGTGTTATACCACAGTTCAGCCCATGGAATGAACTTATGCCACTTTTGAGGTTGCTCATTGCAGAAGCATCTCAAGTATGTCTCTAGACATTGGTTTACCCTTTCCGTCTGCCCATCCGTTTGTGGGTGAAATGCGTGCTTCTTTTCAGTTTAGGTCCCATAGTTGCAAATAATTCATTCCAAAAATGACTAATGAAAACTTTATCCCTGTCTGATAATCTTTTCAATGAATGTAGTCGCCACTTGTTTAGTTGTGAAAGGGTGCTTCATAGTAATGAAATAAGCATACTTGCACAATCTATCTACCACCACCATTATCACATTCATTCCCCCTGCCTTAGGTAACCCTTCTAGAAATCCATTGACCATTCTTCTAGTATGGCGTCTGGAGTAGGGATTGGATGTAATACTCTTGCTGGTTTCGTGGCCTCATATTTGTTCCTTTGACAAATCTCACACTGCTCCACATATTTCTTTATATCAGCCTTCATTCCCTCCCAGTACAGCTCCCCACTCATTCTCTTATATGTTCTCAAGAATCCCGAGTGTCCTCCCAAGATCGAGTCATGGAATGTATGCAGCAATGTGGGGATCACTGAAGACTTCTTTGATAATACCACTCTCTTCTTGTAGAACAGTTTCCCATTCTCCCAGCTAAATTTGTTGATTCCCTCTGGATTCTGTTTCAATAAACTTGGTTGAGCTTCCGATAATCTACACAAAAGCGCCACCCTTCATCTTTCTTTTTGACCAATAAAACAGGGCTAGAGTACGGGCTATGACTGGGATGTATCACACCTGCTTGCAACATTTCCACCACCAATTTCTCAATTTCCTCCTTCTGTACATAACCATATTTATATGGTCTGACATTGATGGGCCTCTGGTTTGGTAAAACCAATATACGGTGATCTATTTCTCTCTTAGAGGGCAACTTTTTTGGATCCTCAAAGATGTCTGCATACTGTTGTAACAGATTTTTAATCATTGGGATCTCTTCTTCGTCCCCTTTCATTGCCTGCTCCACTTCCACCTCAGTGTCTATTTCATACTTTTGGAATTCCAACAGAAAACCCTGATCTTCATTTTCCCACGTTTTCTCAATGGTTTTCAGGGAACATTTGCTTGGATGAGGGATGAGTCTCCTTTCAAAATAATTTTCTGTTTTCCTGACCAAAAGGACATTGTTAGGGATGGCCAATGTATCTTCATGGTGCCTGTTGTATCCAGCCACTGCATACCCAATATTACATCCACATGTCCCAACTCAATTGCTAAAAAATTAGCCACCACCACAACCCCTTGTAGCTCCAATTCCACTCTCTTGCAAATACCCTTGCCTGTACACTTAGTGCCATCTCCAATTGTAACTGCAAACGGATTACCTTTTTCCAAGTATAGGTTCTTTTCCTTTACTGTCCAGTTATGTATAAAATTATGGGTTGCTCCACTATCAATCAGCACTATCACTCCTTTGCCCTTTATATTTCCCTTCAGCTTCATCGTTCCCTTCGATGCCATCCCATGGATTGTTTTCAATTCTATTTCCTCTCCTTCTGCAAAATCCAGAAGGTTTAGTTCCACTGTTTCCCCTGGTTCCTCTTCTATCTTGCCTTCCTCTTCCTTACTCTCCTCTTCATTCATGATAAATAACATCAGCTCCCTTTTTTCCTTCACTCTACATCTGTGCCCCGGCGTATACTTCTCATTGCATTTGCAACATAGGCCCTTATCCAGTCTGGACCTGAATTCTGCGTCTGAAAGTCGTTTGATAGGAGGTTCACTTTTTTTATAACTACTCTTAATAGGTATAGTTACTTGTTTTATGGGGAAATCTGTCTTCCTCATGTAGTCTTTGTCTGTTCCTTCTTGGATTTTTCCTGCATACTCTTCTTTTTTCTTTGGTTCCACTGTCCTACCCTCGGTCTTAGTCAATTTCATTGCTACATTCCGATCATTGACTAGTTGAGCCTCCCTCATACATTCTTCCAATGTTCGAGGGTAACGACTAACGACTTCTGCTTGAAGATTGGGTTCCAGACAGGTCAGAGAAGCATCGCGTAACACACTTTCCTCCATGTGAGGGAGATGAGCTGAATATGTGACAAATTTCTTCACATACTCACTGTAGGATCCATCTTGTTGAATCCTAATCAAGCGTGCCACTAGACTCGTTTGCCTTGAGTCCTTGAAGAAATCAAACATCCTCCCTTTTAAGTCTTTCCATGACTCTACTTTCTTCCTATTATGTGTCCACCGGTACCAGTCCACTTTATCTTGCCCAAAGCTGACCACAGCCACTTTGAACTTCTCATTTTCTGGCAGGTTGTTGATCTCAAAAAAATGTTATGCTCTATATACCCAGGATTCGGGATTTTCACCTAAGAACATAGGCATTTCTAACTTTTTGTACTTACTTCGATCCACATTATTTCCATTTACCTCATTACAGACTTCCGATTCTTCTACTTTTCCTTTCAACTTCATGCTGGATCCATCAGATGTTCCGGATTCATCTCTTTTCTTATAGCTATGATTCTCTCTTAGTTCCTCCGTCAGTCTTTCCATAGACTTCTTCATTTCCAGTAACATTTCTTTCATGCTCAACAACTCCTTCTCAGTTCCTTCCATTCGTTCCTCCAATTGTCTTTGTGCCATGCGACGTGTAACAACACCCAGTTTTTTGTTGTTGTTGGGCTCTGATACCAAATGTCAGGATTCTAACACACTTTCTAATAAAACACCGAACAATGGCTAAACAGAGACATCACCCTGTGATCTTTATTTATATATATAGCCAAAAGATACAACTACAATATGAAATGAAAGTAAGAACAGTAAATAACAAGAGCATACCAGCATCCTTTACAAGAAGGATACCCCCTCCTCTTTACGGCTGCTGCCGCCACTCTTTACCCTAGGGATAACAAAAAGATACCCCTCCCTATTTTCCAATCATTCTATTTATAATCACCCTCAAATTCCTACTCAGTGGGACCCACCTGCACATTCTCTTACTTCCCACTCATTCTCTATCATTACATGTTGGTGAATTTCCCTTCTTACCCTTCCTAACATACGTATGTATGATTGGGGGTCTCACACCATAGTAGCTAGGCAACTGAGTAGAAGGATGTCAACCTTGAAAGGCAATGTTCATACGATTATAATAATCCAACACAATATTTTTGGGAAACTTATTTGTATTGTACTATATGCCCTAGCTGCCAATTTAGTTTCTTTTTAATTATTTCACTAATAATTTTTTGAATACGTGGAAAATTTATTTGTAGGGGGTCTTATCAATGAAAACACACTGATGAAAGTGAATAGAGGGCTTAATGAGACTACTGGGGTTGTGCTAGAATACTTGCAAGATGCAAAGGTAATTATAGAAAAAATTATAGTTGTAGTAGGATATGAGGATATTGTTCCTTATTTAAGATTGTGATTTATGATTCTTCAGGAGTATGGACAAAGAAAAGGAGATGACATTTTAGCATTATTTATACTGGTTATTGGAAGGTAATATATTATATATTTGAAGGTGAAGATGAATAGATGTTTGTCAGCATCCAGTTATTACCTACAATTCGGTTTTTATTTTACGAATCTAAAATACCTGAATTGCATTTCTATATTTACAAACGACGGCCCTTCCAACTCACTGGTTTCTTTGTAATTTTATAAGAATTAGAGAAAGAAGTTAAATGATTCAGCATCCAAGTAAAAGCCTACGAAGATAATTCAAATTTGAACATGTCTGTATGACTTATATGCTCAAAGAAATGTGTAATAACTGTAGGAAAGTTCCAATTCTTTCATTAAATCCATTTCATAGAACTCTTAGTTCATTTTCTTTCCTTCTTTGTTTTTTTTTTTTTTTTTTTTTATCTTTACCTATTATTTTATCTGGTTTAATGTGGTTGAGTGAGCCCACTTTGTAATTGACAAAATATTTTTATTTCAGATTTCTTTGAAGTGGGAATCTCAACCTTAGATTTCTTTGAAGTGGAAATTTTTTTGGTATAAATTACTTTACCCTATTGCACAATTTGAGTATATTCATACTAAAAGATCATCATTCCATGTGACTTTTACTCTTTTCAGTATTTACTAGATGGTTTGGTTCTCTATTGATGGTGGACTTTCCCAGTTTGATGCAATCCTTATTGTTTCATGTTTAAGATAGCTTGGAGTTTCTTTTCCGTATGTACAGATTTTATATACTTCAAAGAATTCTAAGTTCTCTCTTGTTGTGTGAGTGTGAGTTTACTTTTTTGGGGGTGTTCTGGTGGTTCTTGAGCCTAAATACATGTTGAAGTGCTATGACTATTCTGCAGCTATGGTAGACTTTTTCTTAATTTTACTTTATGCGTGCTTAAATGATAATTTTTTCCTAAACGTGTTTTGATAAGGAACATATTTCTGCATGTGAGAAGAAGAAACGTGCTTAAACGTATTTAGGAAACATATTCTTCCTAAACGTGCTTAAATGATAATTTCTTCCTAAATGTGTTTTGATAAGGAACATATTTCTGCATGTTAGAAGAAGAAACATGCTTAAGCGTGTTTAGGAAACATATATTTTTTGTCTACTTATTAGACAACTTTAGCAATTGAGTTTAATTTTTTACAGGAAAATGAATGGTAACCAGTTGGTTGGTACAATTCCTTCTAAACTCGGGAACTTGGATAAGTTGTTTGAACTGTGAGTTACATTTTTTAGTTTCTAATAATTCATTGTTTCAATTCTCTCGCAACAGTGAATAATATAACTACCTTTTTGTCTACAATATATTTATCAAACTTTTGATGCAAATATTTCTTTGCTATATCTAAAAATCTTGTTAATAATTATTTTAAAGGACTTATCTCTCAAAACACATCAGTTCTTGCTCTGCATCAAATCAATTGTAAAATACCCTACTGCCTTCTGTTGAAATTTCATAGGTGACTAAAAATGCTTTGGTAGAATAGTTATAGAATGCCAACTTTCTAAAGCATGACTTCTGCTGTGTAAATAGAAGTGAATCACAACATTCTTGTACCTATGGTTCTATGTAACATTACTTGTGTGAAAGAATTTCGTGCTTTTTAATCAATTTTTGTTACTATATTTTTAAAATTCCTAGATGGATAGTATTTATTCATATTGCCCAATAATACCTCTTTGGTTATTGTGAGTATATGCATTTATATCTTTTCTTAGAAAGACTCCAATATTTTTTAAAAGTATAAGTTCCTGTTCAAGGAACCCTTTTGTTTGGGGGCGTACATCTCGTAATGCATAATTTTTTTGGGATTCTACTTTGGTACGTTATTTGTAATTTTATAATTTGAATCTACTTTGTTGCTTCATATCCAAGTGTTGATTCATATCCCTTTATGTTGCTTTCTTTTATGTTTGTTGGACAATTTAGACGGGATGATTGAATTGAATACTTAAGGGAATTGGGCGGGGGGGGGGGGGGGGGGGGGTGGTTAGTTGTTTTATTATTGTTTTCTTGTGTGTCAATATGTTTTATGGAACTTGCCTGATAATATAGGCTGCCATGTTAGGATAAATAAGGATTGGGGGCTGGAATTGGACAGTTTGCATGAGATCAATTCTCATCCCTCAGTTTGAATTGATTAAGCATGGGGGAGGGGGGAATCAACAACACTCTATTTTGTAATAAGAAGTGGGAATTAACAACACTCTACTTTATAATAAGAAGTGTGCCCTCTTCTTATTCTCCTATAATCTCAGTATTGTTTCTTTTCAATCTTTCATCAATGGGAGTATTGATATATGATCTATTGGCTAAGGACATGTTTTAACCAATTTAGGTTTAACAATAATGTCACAATGTATTTACTTGCTCCTTTGTCCACTAGCCCTTGAGTCAACCCATATATTTTGTATGTGTCATTTTCATTATTTTTTTATTAAGGGCTGGAATTCTATACTTTTCATGTTTTATTTACCTGTAAATTGTTTCAAACTTGATTGAAAATGTTATAATTAAAGCTATGATTATTATTCTTCTCTGTTGCGCGCCATTTTCATTGTGCAACATTCACTATGTCTTAATTAGCTTTAAATAGAACCTTCTTTTAGGTAATGTTCTTTAGTTATACTCTAAAATAAAATTTTGTTTTTCTTACTAGGTTTGGAAGAATCCATTGGAACAATGAAGCCAACTTGGAACAATTGATCGATATAAGACGTTTTGTATGGTTGGTAGCAAAATCTTGGTTCCAATGTACTGAATTTAGGCTTGTTAGTAGATAAAGATGTCAATGTTTATTCTTTTTGTATGTAAACTATCTTTTAACAAAAAATAGTTATTAGTTAATAGGTGTACGAATATTACAAAGTGTATTATTACGTATATATATATTAAAGTGTTGACTCCTTGTTTTCATACGGGTGTGATGTATTGGAATATTATTGGGGAATTGACAAAAATAGGC

Coding sequence (CDS)

ATGAAAGTGAATAGAGGGCTTAATGAGACTACTGGGGTTGTGCTAGAATACTTGCAAGATGCAAAGGAGTATGGACAAAGAAAAGGAGATGACATTTTAGCATTATTTATACTGGTTATTGGAAGGAAAATGAATGGTAACCAGTTGGTTGGTACAATTCCTTCTAAACTCGGGAACTTGGATAAGTTGTTTGAACTGTTTGGAAGAATCCATTGGAACAATGAAGCCAACTTGGAACAATTGATCGATATAAGACGTTTTGTATGGTTGGTAGCAAAATCTTGGTTCCAATGTACTGAATTTAGGCTTGTTAGTAGATAA

Protein sequence

MKVNRGLNETTGVVLEYLQDAKEYGQRKGDDILALFILVIGRKMNGNQLVGTIPSKLGNLDKLFELFGRIHWNNEANLEQLIDIRRFVWLVAKSWFQCTEFRLVSR

Homology

[Close]

BLAST of Cucsat.G4423.T3 vs. NCBI nr
Match: XP_011654484.1 (uncharacterized protein LOC105435406 [Cucumis sativus] >XP_031742282.1 uncharacterized protein LOC105435406 [Cucumis sativus] >XP_031742283.1 uncharacterized protein LOC105435406 [Cucumis sativus] >XP_031742284.1 uncharacterized protein LOC105435406 [Cucumis sativus] >KGN50868.2 hypothetical protein Csa_018392 [Cucumis sativus])

HSP 1 Score: 220 bits (560), Expect = 2.60e-72
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0


Query: 1   MKVNRGLNETTGVVLEYLQDAKEYGQRKGDDILALFILVIGRKMNGNQLVGTIPSKLGNL 60
           MKVNRGLNETTGVVLEYLQDAKEYGQRKGDDILALFILVIGRKMNGNQLVGTIPSKLGNL
Sbjct: 1   MKVNRGLNETTGVVLEYLQDAKEYGQRKGDDILALFILVIGRKMNGNQLVGTIPSKLGNL 60

Query: 61  DKLFELFGRIHWNNEANLEQLIDIRRFVWLVAKSWFQCTEFRLVSR 106
           DKLFELFGRIHWNNEANLEQLIDIRRFVWLVAKSWFQCTEFRLVSR
Sbjct: 61  DKLFELFGRIHWNNEANLEQLIDIRRFVWLVAKSWFQCTEFRLVSR 106

[Close]

BLAST of Cucsat.G4423.T3 vs. NCBI nr
Match: XP_008452895.1 (PREDICTED: neurochondrin isoform X4 [Cucumis melo])

HSP 1 Score: 66.2 bits (160), Expect = 5.56e-10
Identity = 35/41 (85.37%), Postives = 37/41 (90.24%), Query Frame = 0


Query: 1   MKVNRGLNETTGVVLEYLQDAKEYGQRKGDDILALFILVIG 41
           MKV RGLNETTGVVLEYLQDAKE+GQRKGDDILA  + VIG
Sbjct: 378 MKVIRGLNETTGVVLEYLQDAKEHGQRKGDDILAS-VRVIG 417

[Close]

BLAST of Cucsat.G4423.T3 vs. NCBI nr
Match: XP_031740388.1 (uncharacterized protein LOC101217523 isoform X1 [Cucumis sativus])

HSP 1 Score: 66.2 bits (160), Expect = 5.61e-10
Identity = 35/41 (85.37%), Postives = 37/41 (90.24%), Query Frame = 0


Query: 1   MKVNRGLNETTGVVLEYLQDAKEYGQRKGDDILALFILVIG 41
           MKV RGLNETTGVVLEYLQDAKE+GQRKGDDILA  + VIG
Sbjct: 312 MKVIRGLNETTGVVLEYLQDAKEHGQRKGDDILAS-VRVIG 351

[Close]

BLAST of Cucsat.G4423.T3 vs. NCBI nr
Match: XP_023536101.1 (uncharacterized protein LOC111797347 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 66.2 bits (160), Expect = 5.67e-10
Identity = 35/41 (85.37%), Postives = 37/41 (90.24%), Query Frame = 0


Query: 1   MKVNRGLNETTGVVLEYLQDAKEYGQRKGDDILALFILVIG 41
           MKV RGLNETTGVVLEYLQDAKE+GQRKGDDILA  + VIG
Sbjct: 378 MKVFRGLNETTGVVLEYLQDAKEHGQRKGDDILAS-VRVIG 417

[Close]

BLAST of Cucsat.G4423.T3 vs. NCBI nr
Match: XP_004145520.1 (neurochondrin isoform X2 [Cucumis sativus] >KAE8649952.1 hypothetical protein Csa_012776 [Cucumis sativus])

HSP 1 Score: 66.2 bits (160), Expect = 5.67e-10
Identity = 35/41 (85.37%), Postives = 37/41 (90.24%), Query Frame = 0


Query: 1   MKVNRGLNETTGVVLEYLQDAKEYGQRKGDDILALFILVIG 41
           MKV RGLNETTGVVLEYLQDAKE+GQRKGDDILA  + VIG
Sbjct: 378 MKVIRGLNETTGVVLEYLQDAKEHGQRKGDDILAS-VRVIG 417

[Close]

BLAST of Cucsat.G4423.T3 vs. ExPASy TrEMBL
Match: A0A0A0KLC1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G049520 PE=4 SV=1)

HSP 1 Score: 134 bits (336), Expect = 5.60e-39
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0


Query: 1  MKVNRGLNETTGVVLEYLQDAKEYGQRKGDDILALFILVIGRKMNGNQLVGTIPSKLGNL 60
          MKVNRGLNETTGVVLEYLQDAKEYGQRKGDDILALFILVIGRKMNGNQLVGTIPSKLGNL
Sbjct: 1  MKVNRGLNETTGVVLEYLQDAKEYGQRKGDDILALFILVIGRKMNGNQLVGTIPSKLGNL 60

Query: 61 DKLFEL 66
          DKLFEL
Sbjct: 61 DKLFEL 66

[Close]

BLAST of Cucsat.G4423.T3 vs. ExPASy TrEMBL
Match: A0A0A0L0A7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G260440 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.04e-11
Identity = 38/83 (45.78%), Postives = 49/83 (59.04%), Query Frame = 0


Query: 1  MKVNRGLNETTGVVLEYLQDAKEYGQRKGDDILALF-----------------ILVIGRK 60
          MKV RGLN++TGVVLEYLQ+AKE+G RKG DILA                   + +  + 
Sbjct: 1  MKVIRGLNKSTGVVLEYLQEAKEHGHRKGKDILASIPGYWEVICSIFEGEDEHMFISAQL 60

Query: 61 MNGNQLVGTIPSKLGNLDKLFEL 66
          +   + +  IPS+L  LDKLFEL
Sbjct: 61 LPAIRQLNDIPSELEKLDKLFEL 83

[Close]

BLAST of Cucsat.G4423.T3 vs. ExPASy TrEMBL
Match: A0A1S3BUW9 (neurochondrin isoform X4 OS=Cucumis melo OX=3656 GN=LOC103493779 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 2.69e-10
Identity = 35/41 (85.37%), Postives = 37/41 (90.24%), Query Frame = 0


Query: 1   MKVNRGLNETTGVVLEYLQDAKEYGQRKGDDILALFILVIG 41
           MKV RGLNETTGVVLEYLQDAKE+GQRKGDDILA  + VIG
Sbjct: 378 MKVIRGLNETTGVVLEYLQDAKEHGQRKGDDILAS-VRVIG 417

[Close]

BLAST of Cucsat.G4423.T3 vs. ExPASy TrEMBL
Match: A0A6J1IMN8 (neurochondrin homolog isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111476614 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 2.75e-10
Identity = 35/41 (85.37%), Postives = 37/41 (90.24%), Query Frame = 0


Query: 1   MKVNRGLNETTGVVLEYLQDAKEYGQRKGDDILALFILVIG 41
           MKV RGLNETTGVVLEYLQDAKE+GQRKGDDILA  + VIG
Sbjct: 378 MKVFRGLNETTGVVLEYLQDAKEHGQRKGDDILAS-VRVIG 417

[Close]

BLAST of Cucsat.G4423.T3 vs. ExPASy TrEMBL
Match: A0A6J1F631 (uncharacterized protein LOC111442684 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111442684 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 2.75e-10
Identity = 35/41 (85.37%), Postives = 37/41 (90.24%), Query Frame = 0


Query: 1   MKVNRGLNETTGVVLEYLQDAKEYGQRKGDDILALFILVIG 41
           MKV RGLNETTGVVLEYLQDAKE+GQRKGDDILA  + VIG
Sbjct: 378 MKVFRGLNETTGVVLEYLQDAKEHGQRKGDDILAS-VRVIG 417

[Close]

BLAST of Cucsat.G4423.T3 vs. TAIR 10
Match: AT4G32050.1 (neurochondrin family protein )

HSP 1 Score: 46.2 bits (108), Expect = 1.9e-05
Identity = 24/40 (60.00%), Postives = 30/40 (75.00%), Query Frame = 0


Query: 2   KVNRGLNETTGVVLEYLQDAKEYGQRKGDDILALFILVIG 42
           KV + LNET G V EYL+DAKE+G +KG D+LA  + VIG
Sbjct: 374 KVIKILNETVGAVFEYLRDAKEHGIKKGTDLLA-SVRVIG 412

The following BLAST results are available for this feature:

BLAST of Cucsat.G4423.T3 vs.


Match Name	E-value	Identity	Description

BLAST of Cucsat.G4423.T3 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011654484.1	2.60e-72	100.00	uncharacterized protein LOC105435406 [Cucumis sativus] >XP_031742282.1 uncharact...	[more]
XP_008452895.1	5.56e-10	85.37	PREDICTED: neurochondrin isoform X4 [Cucumis melo]	[more]
XP_031740388.1	5.61e-10	85.37	uncharacterized protein LOC101217523 isoform X1 [Cucumis sativus]	[more]
XP_023536101.1	5.67e-10	85.37	uncharacterized protein LOC111797347 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_004145520.1	5.67e-10	85.37	neurochondrin isoform X2 [Cucumis sativus] >KAE8649952.1 hypothetical protein Cs...	[more]

BLAST of Cucsat.G4423.T3 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KLC1	5.60e-39	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G049520 PE=4 SV=1	[more]
A0A0A0L0A7	1.04e-11	45.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G260440 PE=4 SV=1	[more]
A0A1S3BUW9	2.69e-10	85.37	neurochondrin isoform X4 OS=Cucumis melo OX=3656 GN=LOC103493779 PE=4 SV=1	[more]
A0A6J1IMN8	2.75e-10	85.37	neurochondrin homolog isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111476614 PE=...	[more]
A0A6J1F631	2.75e-10	85.37	uncharacterized protein LOC111442684 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of Cucsat.G4423.T3 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G32050.1	1.9e-05	60.00	neurochondrin family protein	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G4423	Cucsat.G4423	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G4423.T3.E1	Cucsat.G4423.T3.E1	exon
Cucsat.G4423.T3.E2	Cucsat.G4423.T3.E2	exon
Cucsat.G4423.T3.E3	Cucsat.G4423.T3.E3	exon
Cucsat.G4423.T3.E4	Cucsat.G4423.T3.E4	exon
Cucsat.G4423.T3.E5	Cucsat.G4423.T3.E5	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G4423.T3.C1	Cucsat.G4423.T3.C1	CDS
Cucsat.G4423.T3.C2	Cucsat.G4423.T3.C2	CDS
Cucsat.G4423.T3.C3	Cucsat.G4423.T3.C3	CDS
Cucsat.G4423.T3.C4	Cucsat.G4423.T3.C4	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G4423.T3	Cucsat.G4423.T3-protein	polypeptide