Cucsat.G21224 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CTGCAGCAATCGATCATGAGATGCAAGCTTCAGTACAGTACCCAAGCCTGCAGAATGAGAGAAAAAAAGCACATCAAAATAAGACTTGAAGAGTTCTAGGTTCTAAGAGAGAACAAAGAATTGTAAGGTTTAATTACATTCAATCATTCTGAATAATACCCATAAGTTTATTTTCTATAAATCATAACCTTCTACACTGTGCAGTTGACGTGCATGACTTGTAGATTTTTCCTAATAACAAGAATGGTTGAAAGCATATTTAAAACACATATTTGATTGGTAATATCCAAAAAGCAAAAAAGAAAAATTTTCAGTCATCCCAACATTCTGATGTCCAAATCTGAGCTTTAGAACTTACATACTTGGTCTTGACGTCTTGAGTTTGTAATCTGGCCATGCTATCTTAAGCGATCGAGGCTTCCTTGTGTTCCGTTGAAATTTCAACGCCATGGCTACTTGCAACATCAGAGGATCCATGGTTGCTTTAACGGTACAGTATTTCTGTAACCGTAAGTGCACATGTATACATGATTATTCAGATATGGAGAGAATTGGTCTACACTATATGCAGGCGAATATCCCCTTTAAGAATCTGCCAATACTTCCAACAGGATGACAAGAAAAGTTTCGATAAACTATACCTCAAAAACATTTCTATTAGAAGAAAATTGTTTTGCCATAAGTATGCTTGGGATTACTTTGGAGAATCTTAGTTTAAAGTGCAACACTCTTTCAACTTTTGAAATAAGCACTAACGAAGTCTTTGCTCAAAATTACAGTTTAAGGTGTTTTTAAACCGTAAAGTCAATGAGAGCAATTAGAAATGTTTTTCAAACCTATATCTTTGTCGGCTAGGGAGCAATTGTACATGTAGATTTTCAAACATACAATATTAAAGTGTATACCTCTTTCAATAATTAGAGTTTTAGTTTTCTAAACTTTCATCATGTCAAAATTGATTCCAAACTTACTATTTGTCTATGATGCTGGAATCAGATAAGAGCAGATTTAGTGGGGGGCAAAACAGTTTTAAGCTTCTTCCTCAACCGTTCAAGCTCCTCATATTTGTCTGTTGCATGTGCCTTCAAAAGACATCTCTCCATTATCAGAAATGCTGCTTCACTCATCTGTCTCCCTCTCTCCAACATTTGTTTAGAGCATTCAAATGCTTGAAGGACCATTCCACGGGCACATAATCCTGTTACCAACAGATCCAACACATGACTATGAGGACAGTATCCCTTCTCTACCAAATAAGCCCAGAAACCCAAACCCAAATCAACTCGACGATTTTCGCAGAAAAACTTCATTATCATCACTGCCGTTCGTGTTTTGGGCACAAAATTTCGCCCTACCATTTTGATATACAACTCATAAAAACCTCCAACATCTTCCAATCGAATCAAGCCTGAGAACATCATGTGGTAGGTCACACTGTCATGTTCAATGTGTTTAGCCTCCATATCTTCCATTACAGATGCTGCAGACTTTACATCACCAGACCTAATCAAGGAACTTATCAAAGCATTATAAGCCCCAATATCAGGACACAAATTTCTCAGAGGAATTTCATCAAACAGTTGGCGAGCTTTGGTTTTATCCTTGACTATCCCTGCTCCGTGGATAAGAGTAGTGATTGTTTCCAATGTTGGCTCACATTTTGCCCTCTCCATTTCTTTAAAAACTCTCAAACCATCCACGAAACAACCCTTTTTGCAATATGCATCAATTCTAATGCTATAAGTCACAGCATTTGGCTTAAAACCTCTCTTAATCATCTCATGATAGAAAAGCTCAACAGAAGTAATATCACTCGATTCCTTAAACCCTAAAAGCAAGAGATTTATGGTTTTAATATTTGGGGGAAATCGAGAATACATCTTGTGGAACACTGATCGCGCCTCTTTCATTTGTCTCTGAGTACAAAAAGCTCGAAGGAGTACATTAAATTCCTCAGTACCAAATTTCCTTCCAACAAACACTTCATTCTCCATTCTCTGAAACGCTTCAATGGTTTCTTCAAATGATAGAAACTTCGCAATCCTCGAAAGCAAGATGCTCATGGACTTGAGAGTAAGCAAAAAAGGGTGAGTTTGTCGAATCTCACGCATTAACTCCCATGATTGATCGAAATATCTCATTCTGGAGAGAATGTGAAGGGTCTTCTCGAAAGCGTCAGAAGTTGGGGGAGCTTGAGAATGATGGAGGCAGAATTTGAAGAACTCCAAGGCTTTGAGGCCATTGGAATGAGCTGCAAAGAGTTGGCCAAGGACGTCGTTGAGAAAAGTGTTTGAAGGAAGAGGAGATGGAATGAGGTGAAGAAGAGTGGGGTGAAGAGGTTGATCGGGAAATGGATGGTCGTTGATGATTTTGGCGATTCTTTCGATTTCAGTTGTGGATTTTGAAGATGGATGAAGATTAGTACAATAAGAAGCTGCAAGAATCAGAAACGAATGAGAAGAAATGGGTTTTTGAGGGATTAGAGTAAGCTTCATCAGAACCGCCATCTTTAGTTTCTTCAACCTCCTTGAATCGATAAAGATCTTAAACTCATCTACTCTATTGAAGAAGAAGAATCGAACGATGAAAAAACTGCAGATTGAAGAAGGAAGAAAGTATGCAATTATGGTTAAAGTTGTAATTTCGTTGAAATAATCAGAAGACAACAATGAACCAAACTCAATGGTCCGACCCGGTCTAGAGAAATGGGTCTTTTTAGCTTACTTACGTAACGACGACGTTTAGGCGTAACCCCAACATGGAAGAGTGATTAACAGAATTTCTTCTTCTTCTTCTAAGAACATAAATCACCAAACTCCAAATTTCTGTTCCTCTTCTTTAGATCTGATCTTCTTCTTCATTCTTCGCTTCAATTCGATCCATTTTTCTCATCGTTTTCCCGAGAAAATTCCCTTCCCGGGAAATGTCGCACAGCGATACAATTCCTCTTCATCAATCGTCCCAATCGGACATCGACGAGATCGAAAATCTCATCAACGCCAGCGTTCAAACCGGCCCTTCAACTGTTCTTCCAGCTCGACCCCCAAGTCCTCCCAGGGCTTCCATTCCTGTTTCTTCTTCCCCCTTTTTACAGTCCAATCTACCCCCACTTCCCCCCAAATCCACCATTCAGAAGCCGCCGACTGTCTTTCCTACTCCACCACCGTTGCCCGTTTCCGGTAATGGGAGGCCCGATTTATCGGCTTCTGGATTTGGGTCACCTCCCAACACTCTCACCGAACCGGTATGGGATACGGTCAAGAGGGATCTGTCCCGGATCGTCAGCAATTTGAAGCTTGTGGTTTTTCCTAACCCTTTCCGTGAGGACCCTGGAAAGGCTTTGAGGGATTGGGATCTGTGGGGGCCTTTCTTTTTCATTGTGTTCCTTGGTCTTACTCTTTCGTGGTCTGCATCGGTCAAGAAGGTTAGCCTTGTAAAAATTTGAGTTGGTTGAAATCGTTAATTGCTTTCCTTGGGCTTTGTTTGATTTTAGTTCACATGCAAGTCTGAGTTTGCATCAAGATTTTTAGTTGTTTATGATGTGATTTTTCTTATATTTGCCTGTTTTGGGCTTTTGATGCTTTGGTTTGGCTTGGGAGCTATCTGCAGTTATTAAGATTTGGATTTGAGTTGAATTCACTGTTGAAAGTTAAAAATATAGCTTAGTATTTTATATCTCAGGGAAGGCAGAAGCGACTGTATTGGCCAGTTTGTTTCATTGGATTTTAATAGGCACCATGATTCTAATCAGTTGGAATACTTGGGAAATTATAGGAACACTTGCAAGCTTCTATCAATGGCTGAAAGCTAATTGAATAGATGCATAAGTGTTGTAATTAGTATGGTGGAGTGCATAAATGTAGATACAATTTTTTTAAAATGGTTTATGGGATATAAACCATTATCTATGTGCTAGATCACTGCATATTCAGGATATTGAGACGTGCATGGATAAAACCTCAAGTTCTAAATTTCATTAGGTCTTTAATCAGCATATATTTCGAAGGGGAAATGTAGATATGGACTGCCAAAATTTCTGTCTCATAAATTAATCTGAAGGCAACCATTTTGCTACTTGATATAAAAGACAAATGTTGTTTACTGAACCCGCTATTAGGAATATCAGCTCCTTTTTAGGCAGGGCGCGTTGCTTGCTAGGGTATGTACTTTTATGACTATGGATACTAGACTAAGGGGATATTACTATACTTTAGTCATACCTTCACCCAAGAAAAATTTAGAATTCATGCACTTATTGTTGTTATTATTGTTATTATTATTGTTATTAGTATTAGATAAAGTCTTTCAAACGAAACACTACCTTTATTTAATCACCGTCATTCATTAAATAAAGGCTTGATTTTCTTTTGGTATTCTACTGACTATATCAATTGATTTTCTTTTCAGTCTGAGGTTTTTGCTGTTGCATTTGCACTACTTGCTGCTGGTGCAGTGATTCTGACCTTGAATGTGCTTCTCCTGGTAACTAAATCTATCTTTAACTCATTCCCAGCTTCTTTCTCACTCTTTTATTCAAGAACGTGTTTTTACTGTCACGTTTGTTTTTATCCATTAGAAAATGGAGTTGATACTTATTTAAAATTGTGCTGTGCTGCCTTCTTTATTGCATTCCTATTCATTGTTAGGACTTCGGAGTATGAGGGAACGTTGGGGGGTAATTTTGAAAGATTTAAAATCACTTTTCTCATATTCAGAATTATTCTGAAAGATGCTTTTAATCATTCTAAATGTATTTATGTTTGATTAGTCTACTTTTAAATGCATTTTATTTTTAAATGCATTTTATTTTGAAATGGTTAAAATCACCTTTGTCATGTTCAAAATTGTTTTGGAAGAAGTCCTTCAAAATCAATTTCATGTTTGATTTTTTACTTTTAATAGCGATTTCCATACCATCAAAATTGATTTTGAATGTTGAAAAACATCTCTCAAAGTGATTTAACATAGGTAATTCTTAACTGTTTCAAAATCACTTCCACACATTTCCTAAGAGTTAGATCTTGTGTTAGTCTGGTATTTTTCTGTAAAAATGATGGTCGAAGCAGTTATGTTTTTTTGATTAAAATTAAATTGACATAAACCACACTGTAACAGAGAATTGGACTGAGCTCTTGACCAGAGCCATTATTACGATAGATGTTTTGTAGTTCTGAAAATGAACTTCAGAGGAATCGGAGCTCTCAGGATAAGTTCTCTTGGCTCAAGATGATTTCCAACCATAATGAAAATACCTGTCAGGTTAATACGGTAAAAGATGTCCTATAGCTCTACGAAAAAGCCTTAGCCTAACGTGAATACTTAATATGCTTTCTAGGAATCAGAGCTCTCAGGATAAGTTCAAAGAGTGTTTGGATATGCGTAGGTGAGATGTGCACTTCTTTCTTAATTCCAAACATTTTCTAATAATTTAGAGTTGAATTAAGGGGAAAAAACTTAAATAAACATACAGGTTCATCTCCTTTGTTTGAGTTTCTCATCCCCAGTGCTCTCTCCAATAGATATGGAGAAATATGTAAAGGAAACTGGAAACCAAAGGGGATGCATTGGAGGGCTATAAGTCTAATGATACGGAAACTTATTTAGAGATGATGAGTTTCAATTTTAGGTTTTCGTGACGTAGCATTGTGTGGTCGTGTGGTCTATTTGTTCTCAAAAGACTCATAACAAGTGAAATTTGTTTGCCTCTAATTTTTTTCTCAATAAACATTTCTTTGACATAGTGAAAAGTTATAGATGAAACCAGTATTATTGAGAGAATCAGAACTTAGGAATCCCAAAGTTAACTATCGATACTATAAAAGTTATTCCCATTTCACCGAACCCTCTATATACAACTAAAGCGCTTTTTCAAAAGAAAATGAACAAAAATCCTTTCAATAGAATTAGTAACCGACGGAGCATAATAGAATAAATATAAGGCCCACCACTTCCGGAGACTCCCAATGAGATAGAGGACAATGAAAACTCAGAGTGGGGGGACGACTTAGAAAGAGACAAAGTAGAGGCAAGTGCGTGCACCTCTTTTAAATGTATACATGGAAAAATAAGCACTCCCGCGCACCTTTTACTCAGATGACGAGTGCAAGCACTCTCATTTTTTATCTTCCTTTGGATAAATACAATCCCCGTCAAAAAGATGTAGCTATTGTTAGCGAACCCATTCTTCATTTGCTGTTAAATTTTCTCTGAAGGAAAAAAAAAAATCCAATGAGCTATATTCTCTTACCAAACATGTTTTACTAATACCACAATTTCTTGAACAACTATTAAAATTTTAGGAAAGTAGTGTATGGATTGTGATTCCATCCAGTTGTCCTTCCAATATATACATAATGTTGCTAATTAGTGAACATTTATCAAAGATTGATCCAAGCTTTGAAATGGTACTCCTTGGGCTTGGCGAGCTCTTACTATAGATGTAGATGCTAGTAGTTAACCGTTACTAACCCCACCCCACGTTTGCTTCATATCTCTAATCTATAACAATATTGGTTTCTCTCTGAATAAACTAAAACCACCCTGGTTTGCTCAAAATAATTGGGGACTTTGCACTATGGTTAATGCAGGGTGGACATATAATATTCTTCCAGAGCTTGAGTCTGTTGGGATATTGCCTGTTTCCTCTAGATATTGGAGCATTGATCTGCATGTTGAAAGACAATGTAGTAGTGAAGATAGTTGTGGTATGTGTGACCTTGGCATGGAGTTCTTGGGCTGCATATCCTTTCATGAGTTCAGCAGTGAACCCAAGAAGAAAAGCTCTTGCACTCTATCCTGTCTTCCTTATGTATGTATCGGTTGGTTTTCTCATCATTGCCATTGATTGAGATGCATCATCAATGGAGTTGGTTTTGGTAAGAAGAGATTGAAAAGATGATCGAGTAATCATTTAGGAAGTTCATGCAGTGATCAATATTCTCACACTTTACTGTAACCTTTTTTTTTTTTCCTTTTTGACTTAATATCATATAATGTCTTGAAAGTTGAAACTCAGATCTGCCTACATCATCCCATTCACTGTCTGCAAATTTTCTTGATGGAAATCCAAAACTGTGTAATATTTCTTGTAATTAGAGATGGCTTCATTTGTTTTAGATATAATAATTTTTTTTTCTTTTTTTGGTATTTCTTGTATTTCCTTAGACTTGAAAATCAGAAATGTTGGAAATAATTTCTTGGAAATTGAAAATATTTGAGAGTGGCATTTTGTACTTTGGATATGCTGAGGTGGTGGGAAGCAGATCCATTGTACAAAGATTACATAGGCCAAATATTTGCTTGCTTTCAAACTTTACAAACAATAGGTTTTAAAGTTTTGTTCCCCTAAAATACTTCTTCATTTTCTTTCTTTCTTTGTTTATGTTATTACTTGTGTAATTTTAGCCTATGAAATAAATTACAATTATGTCATTGAACTAATATTAAT ATGTCGCACAGCGATACAATTCCTCTTCATCAATCGTCCCAATCGGACATCGACGAGATCGAAAATCTCATCAACGCCAGCGTTCAAACCGGCCCTTCAACTGTTCTTCCAGCTCGACCCCCAAGTCCTCCCAGGGCTTCCATTCCTGTTTCTTCTTCCCCCTTTTTACAGTCCAATCTACCCCCACTTCCCCCCAAATCCACCATTCAGAAGCCGCCGACTGTCTTTCCTACTCCACCACCGTTGCCCGTTTCCGGTAATGGGAGGCCCGATTTATCGGCTTCTGGATTTGGGTCACCTCCCAACACTCTCACCGAACCGGTATGGGATACGGTCAAGAGGGATCTGTCCCGGATCGTCAGCAATTTGAAGCTTGTGGTTTTTCCTAACCCTTTCCGTGAGGACCCTGGAAAGGCTTTGAGGGATTGGGATCTGTGGGGGCCTTTCTTTTTCATTGTGTTCCTTGGTCTTACTCTTTCGTGGTCTGCATCGGTCAAGAAGTCTGAGGTTTTTGCTGTTGCATTTGCACTACTTGCTGCTGGTGCAGTGATTCTGACCTTGAATGTGCTTCTCCTGGGTGGACATATAATATTCTTCCAGAGCTTGAGTCTGTTGGGATATTGCCTGTTTCCTCTAGATATTGGAGCATTGATCTGCATGTTGAAAGACAATGTAGTAGTGAAGATAGTTGTGGTATGTGTGACCTTGGCATGGAGTTCTTGGGCTGCATATCCTTTCATGAGTTCAGCAGTGAACCCAAGAAGAAAAGCTCTTGCACTCTATCCTGTCTTCCTTATGTATGTATCGGTTGGTTTTCTCATCATTGCCATTGATTGA MSHSDTIPLHQSSQSDIDEIENLINASVQTGPSTVLPARPPSPPRASIPVSSSPFLQSNLPPLPPKSTIQKPPTVFPTPPPLPVSGNGRPDLSASGFGSPPNTLTEPVWDTVKRDLSRIVSNLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNVVVKIVVVCVTLAWSSWAAYPFMSSAVNPRRKALALYPVFLMYVSVGFLIIAID Homology
BLAST of Cucsat.G21224 vs. ExPASy Swiss-Prot
Match: Q93VH1 (Protein YIP4b OS=Arabidopsis thaliana OX=3702 GN=YIP4B PE=1 SV=1) HSP 1 Score: 454.5 bits (1168), Expect = 8.5e-127 Identity = 239/280 (85.36%), Postives = 257/280 (91.79%), Query Frame = 0
BLAST of Cucsat.G21224 vs. ExPASy Swiss-Prot
Match: O64614 (Protein YIP4a OS=Arabidopsis thaliana OX=3702 GN=YIP4A PE=1 SV=1) HSP 1 Score: 446.4 bits (1147), Expect = 2.3e-124 Identity = 240/282 (85.11%), Postives = 251/282 (89.01%), Query Frame = 0
BLAST of Cucsat.G21224 vs. ExPASy Swiss-Prot
Match: Q54RZ2 (Protein YIPF6 homolog OS=Dictyostelium discoideum OX=44689 GN=yipf6 PE=3 SV=2) HSP 1 Score: 131.0 bits (328), Expect = 2.1e-29 Identity = 75/177 (42.37%), Postives = 109/177 (61.58%), Query Frame = 0
BLAST of Cucsat.G21224 vs. ExPASy Swiss-Prot
Match: Q28CH8 (Protein YIPF6 OS=Xenopus tropicalis OX=8364 GN=yipf6 PE=2 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 8.2e-29 Identity = 77/207 (37.20%), Postives = 118/207 (57.00%), Query Frame = 0
BLAST of Cucsat.G21224 vs. ExPASy Swiss-Prot
Match: Q6IQ85 (Protein YIPF6 OS=Danio rerio OX=7955 GN=yipf6 PE=2 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 1.7e-26 Identity = 73/204 (35.78%), Postives = 115/204 (56.37%), Query Frame = 0
BLAST of Cucsat.G21224 vs. NCBI nr
Match: XP_004143629.1 (protein YIPF6 homolog [Cucumis sativus] >KGN50415.1 hypothetical protein Csa_000333 [Cucumis sativus]) HSP 1 Score: 532 bits (1371), Expect = 2.66e-190 Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0
BLAST of Cucsat.G21224 vs. NCBI nr
Match: XP_008467227.1 (PREDICTED: protein YIPF6 homolog [Cucumis melo] >TYK00296.1 protein YIPF6-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 529 bits (1363), Expect = 4.41e-189 Identity = 276/278 (99.28%), Postives = 277/278 (99.64%), Query Frame = 0
BLAST of Cucsat.G21224 vs. NCBI nr
Match: XP_022159810.1 (protein YIPF6 homolog [Momordica charantia]) HSP 1 Score: 518 bits (1333), Expect = 1.65e-184 Identity = 267/278 (96.04%), Postives = 275/278 (98.92%), Query Frame = 0
BLAST of Cucsat.G21224 vs. NCBI nr
Match: XP_038876122.1 (protein YIPF6 homolog [Benincasa hispida]) HSP 1 Score: 516 bits (1330), Expect = 4.73e-184 Identity = 270/278 (97.12%), Postives = 273/278 (98.20%), Query Frame = 0
BLAST of Cucsat.G21224 vs. NCBI nr
Match: XP_022995736.1 (protein YIPF6 homolog [Cucurbita maxima]) HSP 1 Score: 505 bits (1301), Expect = 1.24e-179 Identity = 265/278 (95.32%), Postives = 269/278 (96.76%), Query Frame = 0
BLAST of Cucsat.G21224 vs. ExPASy TrEMBL
Match: A0A0A0KL60 (Protein YIP OS=Cucumis sativus OX=3659 GN=Csa_5G173430 PE=3 SV=1) HSP 1 Score: 532 bits (1371), Expect = 1.29e-190 Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0
BLAST of Cucsat.G21224 vs. ExPASy TrEMBL
Match: A0A5D3BPX9 (Protein YIP OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1728G00400 PE=3 SV=1) HSP 1 Score: 529 bits (1363), Expect = 2.14e-189 Identity = 276/278 (99.28%), Postives = 277/278 (99.64%), Query Frame = 0
BLAST of Cucsat.G21224 vs. ExPASy TrEMBL
Match: A0A1S3CT87 (Protein YIP OS=Cucumis melo OX=3656 GN=LOC103504629 PE=3 SV=1) HSP 1 Score: 529 bits (1363), Expect = 2.14e-189 Identity = 276/278 (99.28%), Postives = 277/278 (99.64%), Query Frame = 0
BLAST of Cucsat.G21224 vs. ExPASy TrEMBL
Match: A0A6J1DZT8 (Protein YIP OS=Momordica charantia OX=3673 GN=LOC111026118 PE=3 SV=1) HSP 1 Score: 518 bits (1333), Expect = 7.99e-185 Identity = 267/278 (96.04%), Postives = 275/278 (98.92%), Query Frame = 0
BLAST of Cucsat.G21224 vs. ExPASy TrEMBL
Match: A0A6J1K2R2 (Protein YIP OS=Cucurbita maxima OX=3661 GN=LOC111491180 PE=3 SV=1) HSP 1 Score: 505 bits (1301), Expect = 6.02e-180 Identity = 265/278 (95.32%), Postives = 269/278 (96.76%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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