Cucsat.G20944 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ACTCAAAGATCAAAAGTTGAAGAATTTCACAAAATTAAGTAAATGTCTTTTTATTTTTGTTTTATTTCTTTTTAAAAACCATATAAAGGCATTTTCAAATTTTTAGAGGAAAAAATCAGCCGCGAAAAAACGCCGGCGGGGACGGAAGCGGCAACGTTTAGTAAGGTGCAATGATGGAGTTTTCAATCTCCGATCCAACTCTCTGGAGAGAAGCTCTCTCTACTTATTCATCTCAAATCGAAGCCCTAGGCAAGCCCAATTTGGTTTCTCTCGATGATTTTTACCGAAACGAACTTCCTCTTATTCTCCACAAGCGAAACCCTAGCCCTTACATCACTACTTCTGAGCTCTCAAAACTCATGCAATGGAAGCTCACTAGAGGAAAATGGAGGTGCTCAGTGCTCTGTATCACATTCTTTTCATTTAGGTTTCGATGATTATTTATCAATTTTATCTACAACGATTTTACGAATTTCAGGCCTCGTCTCTTGGATTTTGTTTCATCATTGGACGAATCGCTCGTCAAATTGGCCTCTCAGAAGGCCTTCCAATGCCTTCCTGATATTTCCAAAGCCGTTTCTGAACTTACGCCGCTCAAAGGCGTTGGTCCGGCCACTGCCTCGGCGGTTCTTGCTGCCTACGCCCCGGATGTTGCGCCTTTCATGTCCGACGAGGTGAAATCATGATGTATATTTATGCAATCATTATCCGTAGCCATTGATTTCTGCAAAAAGTTTTGAATATCTGTTATGCCTAGATTTCTAACTTATAGTGGTGAAGAAATAGGCTATGGAGGCGGCTCTAGGCAACTCCAAGGATTATTCATTGAAGCAATACTTACTATTCGCAAATAAATTGGAACAAAAAGCCAAGGTCTGTCAGCTTTTTCCATTTCCATCCTTTCAACCTTCATGCGCCAATTTCATTATTTTTTTACATTGACATTGCTGACTTTCTTACTAGCTTCGCTCTGCAAAGGTCTGTTTCTCAAAGCCATGATCGATATGGTTTAGCATTCTAGAATTGAACTGTTGTTTCAAACTTTGAGTGTATTGTATACAAGCATATGCTATAATAAATATAGTCTTGTGTGACTCGTGCTTCATTTGTGAATGTACAATATGTAAAGATCTGCATTTAGTATATTTTCTCGATTTATATATATGGGTTTGTGTATCTTGTGAGATTAACAACCTTGGAACGTGGAATAAAAATGAAGGCGTGAGTTAAACACAAGCTTGATTTCTGCATCTTAGACTAAGCTTAACTTAAAGTCAAACATTCTAATTGTTCAAGGAAGTGGTTACAAATTTTTTCTGTTTGTTGGACTGTTTTGAAACTGTTCCAACGCTCCGAAAGACGAAGTAGGGGTCTCACTATTTGAAGTATCTATTATAGCTAATACATTATTAGTGAATCACGGAAATCTGGATGTTGATTCACTGTTGTTTTACACTTTTTTTTAGTTATTTCTTGACATTGTTCTTTATGGGAGATGGTCATTTGCAGGAATTAAGCTTAGAAGGAGAAATTTTCACACCATCTGATGTAGAGAGGGCTTTGTGGAGTAGGGCTATAGGGGAAAAATTGAAAGGTTCAAAATCACAATTAGATCCTAACAATGGAGGCAAAACTGGAACCAAAAGAAAGAGAAAAACTTCCAAGTGACATCCACTACCAATGGCTTTTGAGTTTTGTACTTCTGGTTTTGGACATGCAGCTGATGTTGGCCTTTCAGGTTTATTCATTACTGCAACAATCTAGCTTCTATTCCTTAACTTACAATGTAAAATTGCAAATACTCCCTTGAAGATCATGTTTGATGGTATCTAATTGAAACTTTCACCCTATGTCCTTTGTTTTTTTTTTTCTTTTTTCTTTTTGGAGATCACTTTCCTAGTTTGAAAATATTTTACAAACGGTTTTGTAATTTCAGCATTATTTGGGTTTTTTTTGTGTGCATTTTGTACCTTTTGTCCAGTCATTTATTTTTCTTTTAGAAAAAGTGGTCGACTAAAAGTCTAAAAATCACTTTCGAATAAATATTGTAGAACTACATTCAAACATATTATTATTAAGAAAATGATCATCAACCTACTAATTATTTCACGGTCGTGAGTAGCCAAATATTGAAACTATTTATAAAATATACCAAAAGAAAAAGAGTCTAATGAATTTTACTTTCTAAATAATTTGAGTGTTTTTCTATTTTAGAAATGTTCAGTTTGTTTTTTATTTCATTTTTAAACAATTTGTCATTCATACTTATTCATAAAGTTATTCTAAATGTACATCTAGGTTTGCTAATTATAATCTTAATATGTTAAGGAACAACTTAATATAAGTAAAGTGTTACAATCATATTTGCACCTTTCTTAGTACTATAATTGTGAACGAAAATTAAAGATCACAAACGAAAAGAAACTAAAAAATCCCCAACTTACCCAAAAAAAAAAAAGAGTGTACTTTATTTGGCCCAAAAAACAAGCCCAAAGGCAGATTAAGTAGGTAGATATCGTGTCTTGCCTTGATTCGGTTTTCTCTTGGACTGGGTAACAGGTATGTGACGTTAAAGTTCCCCGTCTAGGCTTTGGCGAAATGGTTCGGCAGACCTATAACGTACAAGAGAAAACCGTTGAATGGAAGCCAAGGCTGCAGGACCCACTTGCATTCAACTTGTACAAGTGGGTACACCTCATTGGCTCCTCCACCTACAACCCGGACGCCACGTCGGTTCCCGCGTTACTCCTCTATAATAGTTATTTTTCTAACACAAGACCACCGGCAACGGCATATTTTCCTTCGCCGCGACCCGCCTAATTTTCTCCAAATTCCCCGACAAACATCGTCCAAATCTCGGGGAGGGATGACGATGCTAGTTTCCGCCGACCGCAAGTATCGGCGGAGCCCTAAAAAGCTCTTACTCCCTGAGAAATACGACCACCAGGAGCCGGTTGAGGCAGGGTTAGATGGCGCATCGTTCTCCGGAGCCGTCTTTAACCTATCGAGCACCATTGTCGGCGCCGGAATCATGGCTCTTCCAGCTGTCGTGAAACAATTAGGTCTAATTCCAGGGTTGATCTTGATCATGCTCGGATCGACGTTGACAGAGTTGTCAATTGACTTCATCCTGAAATTCTCTCGGGCGTCCAAATCCGTTACGTACGCCGGTGCCGTCGGGGAATCTTTTGGCAACGCCGGACGTACCCTCCTGCAGGTTTGCATCGTGGTCAATAATTTGGGTATGCTCGTCGTCTACATGATCATCATTGGTAGGTACCATGACTTTGCTCTGTGAAATTTCTTTCTTCTTTAATTCGTATATTATAAATTAGGCTTATGTTAAGAGCAAGAATATGTTCCCCAGTTTTTTAAGCAAGAAATTTGGATTTTGAAGCTCATATATATGTATATATACACACACACACACATAATTGAATGAATTTAAAGACTATTGAAATGAATTTGGAGTACAAATTAAAAAAGAAAGGGATTGGATTTTGCAGGTGATGTGTTGTCAGGAACATCGGCTAATAACATCCATCATAAGGGTGTAATGGAAGAATGGTTTGGTCAACATTGGTGGACCAGCCGTTTATCCTTGATGCTGCTTACGACACTTTTCATTTTTGCGCCTCTAATATCCTTCAAGCGCGTAGGTAAGTTAGCCACCACACACACACACACACACATTTACCCGTCTCATTTCTTTTACCCTATACGACCTCACAACTTTTCTCAGTTACTGATGTGGATTTTGTCTTAGACTTTAGTTACTTCAGTTTGCTGTTTTTTAAATTGATTCTTGTTTGAGGAATATTTTAGATTGGGTTATAATGGTTTGGGTTCAAAATACAAACTATTATAATCTACGTCACAAATGAGGATGATGAGAGATGGTGGTTACAAAATAGTAAACATGGTAAATACTAAGTGTTTTTAGAGATAATAATTGTGAACTTGAATATTATAATGGGAGTCCCAAACATTAATAAATGTGGGTTAAAAAAACTGTTGCCTTTTTTTTAATAAATTCTGTGAAATTGTCGCTGCCATTTGTTGGATAATTTCTAATCTATTTTATCCATTGCTACTTGGTTGCTTTTACGATTGGGTCAGTATATATATTGGACCATTTCAATTTCCAATGGTTTTCTCTCTGTAAGATAAAAGATGCTCCCTTGTCGCTTTATACAAAAAACACTCCGAAAAGCTGGTGGTTCTGTAATATGTAACTGCGAGGCAGCACCATGACAAAGAAGTCGTTTTTGTTATTATTACTTTTGGCTTATTACCAATTCGTATCTTTTTATCCAAATATCATAGAGACCAAAGTTACTAGAAACTAAAGGCCAAATAATTATTTTGAGATTCTTTACTTTTTCGTACTCATTCACTGTCATGTGGTCACCAATCTGTCAAATATAAGCTCTCTCTTCTGTATTCAACTTGTATTCCTGCAATGGGAGATTTGTATTTTGTGTTTGTGATTTTAAAATTTTGCTAATGAACAATGAAGTTTCTTTCTCTTAGTGATCGTCTCATAGTTTACAATATACTTAAAAAGTCATTTCAATTCACCATTATGATCAATGTTGGTTTTACAAGATTCCTTGAGATACACATCAGCTTTGTCAGTTGCCTTGGCCATTGTCTTCGTGGCAATCACTGCTGGAGTAGCAATTGCGAAACTGATGGATGGAAGTATTGTAATGCCACGTCTGATGCCCAAAGTTGTTGATCAGGCATCATTTTGGCAACTTTTTACTACTGTTCCAGTTCTAGTCACTGCCTATATCTGTCACCATAATGGTAAGTCTGTTGTTTTGATCTTGTCTTGTTTTCTGATAACAACAATGTCGTTAGTGGAAAATGTGTTTTTAAGTATCTAAGAAGTCATTACAGACAGACTCTAAGATATAGATCGTCCAAACCTTTTCTTTTCAAAATAATTCTTCATTAGTCTCCACGTCTCTTGTAGCCAGTTGATTTTCAATCATTGCATCAATATGTATCTTACCCATATATGATATACCCCTAAGCCCTAACTAGTACTCCCACATAACCCCAACTATTAAAAGAGATGTTATTTTGTTAATTTTTTTAGGGAAACACTTTTTAATGTTTCCAGGTGAAAGTTAAAATAAAAGCCATATATCTGATTCTATAGCCTTCTAACACAGGACTGTACAAAAACTACCTGATCTTGTGTTTATAACTAGGGTGGAAGGCCAGTATATATTTGTTGAAGGGTCTGTTGCTCAAGCATAGCTCGAGTGGTTAAATATTAGGGCCTTCATTAATGAGTTACTGTTGGTTCAATTTCTGAATGCAAATTCTACACGGTATAGTATTGTTGAAGTTGTAGTAATTAGTAAATGTTAATAGTACTTGAATTTTACTTTTTGCAGTTCACCCTATTGAGAATGAGCTAAAAGATCCTACACAGATGAAGTCAATAGTTCGAACATCTCTAACGATATGCTCGACAGTGTATATTGCGACAAGCTTTTTTGGATTTCTCCTGTTTGGAGACCAAACTTTGGATGATGTTCTTGCTAATTTTGATGGAGATCTTGGACTTCCATTCAGCTCATTGCTAGATGATGTTGTAAGAGTGAGCTATGGCATCCACCTGATGCTTGTATTTCCCATTGTTTTTTTCTCCCTTCGCCTCAATGTTGATGGTCTACTCTTTCCCTATGCCATACCTATTACTTTTGACAACCGGCGGTTCTTCTTAATAACTATAGCTCTCATGAGTTTCATCTTTATTGGAGCTAACTTTGTTCCCAGCATCTGGGATGCCTTTCAGCTCACTGGAGCCACAGCTGCCATCTCTGTTGGATTCATTTTCCCCGCTGCTCTCATCCTCAGGTAATCAAGAATCACAAAGTCGATTACTTTAAACACACAAATGATTGCTCAAGTGTTAAGATAATTAAGCTTACTGTAATCTGTAACTCATCAGCAAGCTTTTAAGGTTGATTTGTGATTAAATATGATACTAGAAAATGAGGTCTTATATTCAAATCTCCCATAATGCCATTTCCTCTCGATAAGTGAAGGAGAGTGATGATGTGTTGATATAATTAAATCTATCGTAACCTATTAGCTCAAGTTTTAGACGTTGATGTTCATGCTAAAATAGAACACTTGCACCTGCATTATTAGTTTACACGATCCTCCTTATTCAATCTGTTCCCTACTTTGTTTACATGACATTGCACTCAACATAATCCATGTGATGTGAACTGCACAGGGATACTTGTGGAATTGCATCAAAGAAAGACAGACTGATAGCATGGATAATGTTCCTATTAGCTGTTTTCTCAAGTATCGTCGCAATATCATGTGATATCTACAGTTCTTACGTGATGGAGAAACACACTTGATATAGAAGAAAAAGAAGGAGAAGATGACGTTATTCTCAATACGAACTATACTGCTAAACGGTCTTGGCTAGATGTCATTATCAGAGCTGCAAAGAAAAGCCATTTTTTAGATTTTTTTTCCCATCAAAAGCCAGTTTGGCTGGGGCCTTGTTTGTAACAACCATATAAACAAAGTGTTGATTGATATATTGTAGGAACACTTGGTAATTAAAACCACAAGGTGCCGTTGTCTGAGAAAAATCTTCATTAGGCCTCACTCTCATGGCCGTTGGTTGGCCCAAGATGCACAAATGCTACTGTCAAGTCCCCTTGAGCACTAAATTTTCTGGGTCCGGTTGGTGGCAGGTTTTTGTTTTTGGCATGTTCTTTTGTTTGATTAAAAGAAAAAATCTTAAAGGATGAAATTGATTCAAGCAACTTACTAGGAACCACCTTCAAATATTTTATTCAATAAAAAACACTTATGCTCGTTGTGTTCTTCCATTTACATTTAGCTATTTCTCCCTATGTTTATTGCTGGATAAGTTTGATTTCAATTGGCCCCAACATTCTAAATTATTACAAATTTA ATGTTGGTTTTACAAGATTCCTTGAGATACACATCAGCTTTGTCAGTTGCCTTGGCCATTGTCTTCGTGGCAATCACTGCTGGAGTAGCAATTGCGAAACTGATGGATGGAAGTATTGTAATGCCACGTCTGATGCCCAAAGTTGTTGATCAGGCATCATTTTGGCAACTTTTTACTACTGTTCCAGTTCTAGTCACTGCCTATATCTGTCACCATAATGTTCACCCTATTGAGAATGAGCTAAAAGATCCTACACAGATGAAGTCAATAGTTCGAACATCTCTAACGATATGCTCGACAGTGTATATTGCGACAAGCTTTTTTGGATTTCTCCTGTTTGGAGACCAAACTTTGGATGATGTTCTTGCTAATTTTGATGGAGATCTTGGACTTCCATTCAGCTCATTGCTAGATGATGTTGTAAGAGTGAGCTATGGCATCCACCTGATGCTTGTATTTCCCATTGTTTTTTTCTCCCTTCGCCTCAATGTTGATGGTCTACTCTTTCCCTATGCCATACCTATTACTTTTGACAACCGGCGGTTCTTCTTAATAACTATAGCTCTCATGAGTTTCATCTTTATTGGAGCTAACTTTGTTCCCAGCATCTGGGATGCCTTTCAGCTCACTGGAGCCACAGCTGCCATCTCTGTTGGATTCATTTTCCCCGCTGCTCTCATCCTCAGGGATACTTGTGGAATTGCATCAAAGAAAGACAGACTGATAGCATGGATAATGTTCCTATTAGCTGTTTTCTCAAGTATCGTCGCAATATCATGTGATATCTACAGTTCTTACGTGATGGAGAAACACACTTGA MLVLQDSLRYTSALSVALAIVFVAITAGVAIAKLMDGSIVMPRLMPKVVDQASFWQLFTTVPVLVTAYICHHNVHPIENELKDPTQMKSIVRTSLTICSTVYIATSFFGFLLFGDQTLDDVLANFDGDLGLPFSSLLDDVVRVSYGIHLMLVFPIVFFSLRLNVDGLLFPYAIPITFDNRRFFLITIALMSFIFIGANFVPSIWDAFQLTGATAAISVGFIFPAALILRDTCGIASKKDRLIAWIMFLLAVFSSIVAISCDIYSSYVMEKHT Homology
BLAST of Cucsat.G20944 vs. ExPASy Swiss-Prot
Match: Q9LI61 (Amino acid transporter AVT6A OS=Arabidopsis thaliana OX=3702 GN=AVT6A PE=2 SV=1) HSP 1 Score: 190.7 bits (483), Expect = 1.8e-47 Identity = 98/174 (56.32%), Postives = 132/174 (75.86%), Query Frame = 0
BLAST of Cucsat.G20944 vs. ExPASy Swiss-Prot
Match: F4KBM7 (Amino acid transporter AVT6B OS=Arabidopsis thaliana OX=3702 GN=AVT6B PE=3 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 9.3e-44 Identity = 89/158 (56.33%), Postives = 120/158 (75.95%), Query Frame = 0
BLAST of Cucsat.G20944 vs. ExPASy Swiss-Prot
Match: Q0WQJ3 (Amino acid transporter AVT6D OS=Arabidopsis thaliana OX=3702 GN=AVT6D PE=2 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 3.9e-34 Identity = 79/176 (44.89%), Postives = 117/176 (66.48%), Query Frame = 0
BLAST of Cucsat.G20944 vs. ExPASy Swiss-Prot
Match: Q9LYM2 (Amino acid transporter AVT6C OS=Arabidopsis thaliana OX=3702 GN=AVT6C PE=2 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 7.4e-33 Identity = 73/175 (41.71%), Postives = 113/175 (64.57%), Query Frame = 0
BLAST of Cucsat.G20944 vs. ExPASy Swiss-Prot
Match: Q9M8L9 (Amino acid transporter AVT6E OS=Arabidopsis thaliana OX=3702 GN=AVT6E PE=2 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 1.2e-30 Identity = 69/157 (43.95%), Postives = 108/157 (68.79%), Query Frame = 0
BLAST of Cucsat.G20944 vs. NCBI nr
Match: XP_031740157.1 (amino acid transporter AVT6B isoform X2 [Cucumis sativus]) HSP 1 Score: 353 bits (907), Expect = 4.85e-119 Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 0
BLAST of Cucsat.G20944 vs. NCBI nr
Match: XP_004141301.1 (amino acid transporter AVT6A isoform X1 [Cucumis sativus] >KGN55300.1 hypothetical protein Csa_012788 [Cucumis sativus]) HSP 1 Score: 356 bits (913), Expect = 5.35e-119 Identity = 188/192 (97.92%), Postives = 188/192 (97.92%), Query Frame = 0
BLAST of Cucsat.G20944 vs. NCBI nr
Match: XP_008452683.1 (PREDICTED: sodium-coupled neutral amino acid transporter 2-like [Cucumis melo] >KAA0064473.1 sodium-coupled neutral amino acid transporter 2-like [Cucumis melo var. makuwa] >TYK20115.1 sodium-coupled neutral amino acid transporter 2-like [Cucumis melo var. makuwa]) HSP 1 Score: 342 bits (876), Expect = 2.14e-113 Identity = 180/192 (93.75%), Postives = 185/192 (96.35%), Query Frame = 0
BLAST of Cucsat.G20944 vs. NCBI nr
Match: XP_038896145.1 (amino acid transporter AVT6A-like [Benincasa hispida]) HSP 1 Score: 330 bits (846), Expect = 7.41e-109 Identity = 174/192 (90.62%), Postives = 180/192 (93.75%), Query Frame = 0
BLAST of Cucsat.G20944 vs. NCBI nr
Match: XP_023535239.1 (amino acid transporter AVT6A-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 323 bits (827), Expect = 5.54e-106 Identity = 164/192 (85.42%), Postives = 178/192 (92.71%), Query Frame = 0
BLAST of Cucsat.G20944 vs. ExPASy TrEMBL
Match: A0A0A0L004 (Aa_trans domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G645260 PE=3 SV=1) HSP 1 Score: 356 bits (913), Expect = 2.59e-119 Identity = 188/192 (97.92%), Postives = 188/192 (97.92%), Query Frame = 0
BLAST of Cucsat.G20944 vs. ExPASy TrEMBL
Match: A0A5A7V8L7 (Sodium-coupled neutral amino acid transporter 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G002400 PE=3 SV=1) HSP 1 Score: 342 bits (876), Expect = 1.04e-113 Identity = 180/192 (93.75%), Postives = 185/192 (96.35%), Query Frame = 0
BLAST of Cucsat.G20944 vs. ExPASy TrEMBL
Match: A0A1S3BTU4 (sodium-coupled neutral amino acid transporter 2-like OS=Cucumis melo OX=3656 GN=LOC103493628 PE=3 SV=1) HSP 1 Score: 342 bits (876), Expect = 1.04e-113 Identity = 180/192 (93.75%), Postives = 185/192 (96.35%), Query Frame = 0
BLAST of Cucsat.G20944 vs. ExPASy TrEMBL
Match: A0A6J1FER3 (amino acid transporter AVT6A-like OS=Cucurbita moschata OX=3662 GN=LOC111443403 PE=3 SV=1) HSP 1 Score: 317 bits (813), Expect = 3.40e-104 Identity = 163/192 (84.90%), Postives = 178/192 (92.71%), Query Frame = 0
BLAST of Cucsat.G20944 vs. ExPASy TrEMBL
Match: A0A6J1IHA5 (amino acid transporter AVT6A-like OS=Cucurbita maxima OX=3661 GN=LOC111477216 PE=3 SV=1) HSP 1 Score: 310 bits (793), Expect = 3.57e-101 Identity = 160/192 (83.33%), Postives = 174/192 (90.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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