Cucsat.G16592 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G16592
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	54S ribosomal protein L51, mitochondrial
Location	ctg24: 1227029 .. 1230302 (+)
RNA-Seq Expression	Cucsat.G16592
Synteny	Cucsat.G16592

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCGAAGAAAGACGTGCAAGAGATGATAGAAGAAAAGGCAAAATCATACATCAACAGGTGACATTTCACATCTTTAAACAAAATTGGATGGTTTCATTTTGCATCTTTAAAATGATTTTTATTTTATACTTGTGAGAATTCGAACCAATTTTAGTACACTTCAACTAAGCTTTGCATATCACAGAAGGTAGGTACATTTTTAACATACTAATTAAAGTTTTTAATGTATTTTTTAACTATTTTTTTAAGTTTAAGGATATATTTATAATTTATATAAATATATAAACATTCTATTTTGATATTTTTTGTTAGGATTGTTTTCTAAAATAGCACAACGAAGAAATAAAAAAAATACAAGATTTTATCCTAAGTTTTGAAATAATTTTCATTTTTTTTCATCTGATTTTGAAAATTAGGAAAATACAAACGATTTTCATTTATGATTGGGTTAATTTTTGAGACAATCTTACAAAGTTTAAGGGTATTTGTGTAATTTAGTCATTTTTTTGGTTCTTCTAAACCCTCGTTGAGTCTCAGCCACCCCCTCCGGTCTTCTTCCCTATAACCAACCCCCTACCCCTGCACGCATTTCCTGACCCCCGCCCTTTCACCCTGCCGGCGAAATCGCCGCCGCCCTATATCACACTCTCTCGTCACTTTCAGTAATCAGAGCTACTTGTCGCTATTTATTTTTTCTACTCAGAAACACAGTGGTCGTACCCTTACCCTCGCCGTTGGTGAGATCACTCAACTGCCGCTCGTTTTTCAGATCCCAAGGTTTTATTTTTTTAATTTTTGTTTCTTCGGGTTATGTTGGTTTATTATGTTCACCCACGGAGAAGAAAATCAAGAACAACTTTTGTTTTTGTTGATTTCTTTTGCATACAATGATCAACTAGTCAGCATGAAAACTAAGAATGTATACCTTACAAGATACAAAATAATAATAATAATTAAAGAGGAAATAATTAGGCTTTCTTCTTGAATATATTAGAAACTATCAATACCTATGAACTAGAGCATAGTAGGGGGTGAGCCTTTGCTTATGAACTAGCCAGGCATTATAGATGGTTTTCCAAACTTTTTGCAGAATATGGCTTTGCGAGGTGTTTGGCAGCTTAAGAAGTTGGTTGTCAGCTATTGTGATTGGGGAGGAAGCAGCAGAGGCATCAGGTTTGTTGGATTGCTAAACTATTGCCTATTAGATTACTTCAATACTGAGAATTCGGTTTTTAACTGATGGAAGTTTAAGTTTTAATCTGGAAGTCTTCGTATGTCCATTTTCCAGCATAATTACCTTACTCATCTTAATGAGTATTGAGTTGGGTAGAAGTAGGAGATATTGGAAATGTCTTGCTTTTAGAAATGAGTTATTCAGAAGGGTTCTTGAAGTGTGGCGAGGCACATCCTTTTTTTTCACAGACCGTCCCCTCTATGCCTACCAAGCTTACAAAATGACCTTATCTTTTCTTTTACCTAACCCAAACATGGAATGTCCGCGTGTCATCTCTTTAAAATAATTGTCAATGTTTAGTAATGCTAGTGATGTTTGAGGAAATTGAACCACACCATATGGTTCTTTAAAATAATAGGCTCAAAATCAGAATCAAAACACCATATCAATTGGAATTGTAGTTTAACTTATGTTTATTCTCTCTAATGTAACACGTTCTGGTTTCTAAGTTTAAGCCTAAGTTTAATTTATATTGCTTGACTTGATTCTTAATAACCAACAGCGTAGATATTATATAGATTATACTGTATAAGTTGCTTTTGTGGAAGCAAACTGGAAAGATTTTTTCTCACACATCAGTTTAGTATCAAATTGTACAGCCTCCATAGGAGGTCTCTTGTCAGTTGTCGCATGTATGCTTGGATTCACTTATTCCAAGTTATGTTCTTTTGAGTGTGTTGTTGGGAAAACTATAGAATAGATAGCAGACCTATGCAAATCATATCCTCAATCTTGCATATATATCAAATAGATACATGTCTACTAGCGCTTGCGTCATAGCTATGTAGGTTCTGATAAAGTGCATTTATCTGCCCAGGGAATGAGAATTCCTTTAGGAATCTCTGATTTTTTAATTTATGTTCATCTTTGAAGCCTAATAATCAAACATGTGAAAAGTTCCATGTTTTGAGTGGAGGCTTGCCAAGTTGACTTCCTGGGCCTCTTTGGTGGGGTGTGAAGTCAGTCAGCTTCTTGAATCCTTTCCTTGGTCCTCCTTTGGGAGATGTCTCGAGATCCGTGTGTTTCTGGAACCATTGGTGGGGAAAGTACAGAGAAATTGTTGTCATCGTGGAAATAAGTTTTTTCTCTGGAGGGGGAAGATTAATCTTGATTCAATGTGTTTAGTAGAACTTCTATATAGTACGTCTTTCTTAGCACCTCACCGTTTTTACTGGGTCTCAGGCATTGAGTTGAAGGGTTATTGTAAGAATTTCGGGTCTGCTATTGCGTTGGGATTTCTTATGTTCTCTCAGTTCATTCAGTGTTCCATTGGGGATGGTCGAACACAAACTTTTGGGACGATTTCTAGGTGAATGAGAGACCCCTTTGTGCCTGGTTTCTTCAGCTTTATTCTTTTGGATTTTGACTTTGTAACTGGGTTTTTTTCCCTTTTCTTCTTGTTCTTGAGCTTGTTTTTTGTTTGCTCTTCTATATCCTTTTATCTATTTCAATGAAAGTTTGGTTTCTTCTAAAAAAAATAAAAATAGAAACTTTCCTTCATCCCTTTCCTGTGATATAAAGCCAAGCCTTCTCTGCCCGCCCTTTCGCTGGATGAGACCCGGTTTTTAGGCCAGTCATAAATCACCGGTCAACTTATCAGTGCTTCAAATCGTCTTGCTACTATCATATGGATCAAAACCGCACAAGCGGCCTGAACATTTTTCTTGATATAGAATATACTCGCCACTCGGTTATTGCTAGTCCTCGTGTAGCTTTGATAGTGAAACACATTTTCCTGAATGATTTGTATGTCATCATTGAATTTGCAGAGCATTTATGGAGTCGCAGATGCCAGCTTTTAAGGAGAAAAATCCTCAGCTAGAAGTAGTTACTGAGCTCATTCGTGGCCAGCATCCACACTTGAAGGGATTCTTCAGTAATTCCCTTTCCCTCTCAACTTTTGGTTGTTCATAGTAATAATAATTTACAAAGCGTTTTACGTTTGGTTTTTACCCGGATTCTTTATCTTTCACAGGAAGCAATAACAACCGAGTGGTATGTGTGAAGAACATGGATCCAGAAGAAATTCATTCATGTGCAATGAGGCTAAGGAATTCACTGGGACGAAAGGTCGTAAAACTGAGAACAAGACATGTAACCAAAAATCCCAGTGTGCAAGGTACCTGGAACACTGATGTAAGATTTTGAGGGCTGGATGGATAATTTAATCATTCCTGAAGAGCTTGATTTCATTTAGAGAATGTTTCTTCCATCAATAATAAGATGTTGAAACCAAACTTCTTTATAGAATTGCTTGAGTTTTTGTTGTTTGTAGCAAGTCCTTATGTAACTTTTGAGGTAGTTATTATTTCCCCGGTTCTCTGAACACTTCCGGAAGGTTTTGGATAAAAACATTTTGTTCGTCTTGAAGGATATATGAAACAGAATGGGGTTCTAATTTGAATTGGTAACTTCTAATTCTAAACATTCAAAGCTGCCAACAAGAATTGAAATATTCATCAGACGAGAACACCCCAAGATTACATTTTTGTTGTTCTCGATTTGAACTT

Coding sequence (CDS)

CTCGAAGAAAGACGTGCAAGAGATGATAGAAGAAAAGGCAAAATCATACATCAACAGAATATGGCTTTGCGAGGTGTTTGGCAGCTTAAGAAGTTGGTTGTCAGCTATTGTGATTGGGGAGGAAGCAGCAGAGGCATCAGAGCATTTATGGAGTCGCAGATGCCAGCTTTTAAGGAGAAAAATCCTCAGCTAGAAGTAGTTACTGAGCTCATTCGTGGCCAGCATCCACACTTGAAGGGATTCTTCAGAAGCAATAACAACCGAGTGGTATGTGTGAAGAACATGGATCCAGAAGAAATTCATTCATGTGCAATGAGGCTAAGGAATTCACTGGGACGAAAGGTCGTAAAACTGAGAACAAGACATGTAACCAAAAATCCCAGTGTGCAAGGTACCTGGAACACTGATGTAAGATTTTGA

Protein sequence

LEERRARDDRRKGKIIHQQNMALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELIRGQHPHLKGFFRSNNNRVVCVKNMDPEEIHSCAMRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF

Homology

[Close]

BLAST of Cucsat.G16592 vs. ExPASy Swiss-Prot
Match: Q9UUC8 (54S ribosomal protein L51, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mrpl51 PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.3e-12
Identity = 29/105 (27.62%), Postives = 62/105 (59.05%), Query Frame = 0


Query: 10  KKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELIRGQHPHLKGFFRSNNNRV 69
           +++  SYC+WGGSS+G++ F+ +++ +  +++  +E      +G+HP ++ ++ +   +V
Sbjct: 24  RRIEFSYCNWGGSSKGMKEFLSTKLESLAKESQDVEFHVTNRQGKHPLIRAYYNTGREKV 83

Query: 70  VCVKNMDPEEIHSCAMRLRNSLGRKVVKLRTRHVTKNPSVQGTWN 115
           +C + M    I   A+  R+S G K   ++    + NPSV+G W+
Sbjct: 84  ICTRKMSASSIFQKAILCRDSDGLKPRLIKYPVESTNPSVRGIWS 128

[Close]

BLAST of Cucsat.G16592 vs. ExPASy Swiss-Prot
Match: Q758S3 (54S ribosomal protein L51, mitochondrial OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=MRPL51 PE=3 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.9e-11
Identity = 37/117 (31.62%), Postives = 65/117 (55.56%), Query Frame = 0


Query: 6   VWQLKKLVVSYCDWGGSSRGIRAFMES-QMPAFKEKNPQLEVVTELIRGQHPHLKGFFRS 65
           ++  KK+ + YC+WGGSS+G+R F+ S ++  + EK PQ++    + +  HP LK  + +
Sbjct: 20  IFPCKKITLQYCNWGGSSQGLRDFLTSKRLAKWAEKYPQIQFEV-VAKAGHPVLKAEYIN 79

Query: 66  NNNRVVCVKNMDPEEIHSCAMRLRNSLGRKVVKLRTRHVTK-------NPSVQGTWN 115
             N+ +CV+N++ + +      LR S G ++     RH  K       N SV+G W+
Sbjct: 80  GLNKAICVRNLNVDHVELKLKLLRESSGAQL-----RHYPKNANVLSLNQSVRGVWS 130

[Close]

BLAST of Cucsat.G16592 vs. ExPASy Swiss-Prot
Match: Q06090 (54S ribosomal protein L51, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MRPL51 PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 9.0e-09
Identity = 33/115 (28.70%), Postives = 69/115 (60.00%), Query Frame = 0


Query: 6   VWQLKKLVVSYCDWGGSSRGIRAFMES-QMPAFKEKNP--QLEVVTELIRGQHPHLKGFF 65
           V+  +K+ + +C+WGGSS G+R F+ S ++  + ++ P  Q EV+    +  HP L+  +
Sbjct: 20  VFPCRKITLQFCNWGGSSEGMRKFLTSKRLDKWGQEFPWIQFEVMR---KSGHPLLRAEY 79

Query: 66  RSNNNRVVCVKNMDPEEIHSCAMRLRNSLGRKVVKLRTRH---VTKNPSVQGTWN 115
            +   +V+CV+N++ + + +    L++S G  +++ RT++    + N SV+G W+
Sbjct: 80  TNGREKVICVRNLNIDNVENKLKLLKDSDG-DILRRRTKNDNVESLNSSVRGIWS 130

[Close]

BLAST of Cucsat.G16592 vs. ExPASy Swiss-Prot
Match: Q99N89 (39S ribosomal protein L43, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl43 PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 9.9e-08
Identity = 35/110 (31.82%), Postives = 53/110 (48.18%), Query Frame = 0


Query: 4   RGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELIRGQHPHLKGFFR 63
           R V QL++L +S      SSRG R F+E ++  F  +NP + V         P +   + 
Sbjct: 21  RYVQQLQRLSLSLSRDAPSSRGAREFVEREVTDFARRNPGVVVYVNPRPCAMPRIVAEYL 80

Query: 64  SNNNRVVCVKNMDPEEIHSCAMRLRNSLGRKVVKLRTRHVTKNPSVQGTW 114
           +   R   V +   EEI S   +L +  G  V+++R    T NPS+QG W
Sbjct: 81  NGAVREENVNSKSVEEIKSLVQKLADQSGLDVIRIRKPFHTDNPSIQGQW 130

[Close]

BLAST of Cucsat.G16592 vs. ExPASy Swiss-Prot
Match: Q8N983 (39S ribosomal protein L43, mitochondrial OS=Homo sapiens OX=9606 GN=MRPL43 PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 4.9e-07
Identity = 33/111 (29.73%), Postives = 53/111 (47.75%), Query Frame = 0


Query: 4   RGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELIRGQHPHLKGFFR 63
           R V QL++L  S    G SSRG R F+E ++  F  +NP + +         P +   + 
Sbjct: 21  RYVQQLQRLSFSVSRDGASSRGAREFVEREVIDFARRNPGVVIYVNSRPCCVPRVVAEYL 80

Query: 64  SNNNRVVCVKNMDPEEIHSCAMRLRNSLGRKVVKLRTRHVTKNPSVQGTWN 115
           +   R   +     EEI +   +L +  G  V+++R    T NPS+QG W+
Sbjct: 81  NGAVREESIHCKSVEEISTLVQKLADQSGLDVIRIRKPFHTDNPSIQGQWH 131

[Close]

BLAST of Cucsat.G16592 vs. NCBI nr
Match: XP_004152128.1 (54S ribosomal protein L51, mitochondrial [Cucumis sativus] >XP_004152129.1 54S ribosomal protein L51, mitochondrial [Cucumis sativus] >KGN53023.1 hypothetical protein Csa_015078 [Cucumis sativus])

HSP 1 Score: 248 bits (634), Expect = 3.48e-83
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELIRGQHPHLKG 60
           MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELIRGQHPHLKG
Sbjct: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELIRGQHPHLKG 60

Query: 61  FFRSNNNRVVCVKNMDPEEIHSCAMRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF 119
           FFRSNNNRVVCVKNMDPEEIHSCAMRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF
Sbjct: 61  FFRSNNNRVVCVKNMDPEEIHSCAMRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF 119

[Close]

BLAST of Cucsat.G16592 vs. NCBI nr
Match: XP_038877046.1 (54S ribosomal protein L51, mitochondrial [Benincasa hispida])

HSP 1 Score: 240 bits (613), Expect = 5.57e-80
Identity = 113/119 (94.96%), Postives = 118/119 (99.16%), Query Frame = 0


Query: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELIRGQHPHLKG 60
           MALRGVWQLKKLVVSYCDWGGSSRGIRAFM+SQ+PAFKEKNPQLEVVTELIRGQHPHLKG
Sbjct: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKG 60

Query: 61  FFRSNNNRVVCVKNMDPEEIHSCAMRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF 119
           F++SNNNRVVCVKNMDPEEIH CAMRLRN+LGRKVVKLRTRHVTKNPSVQGTWNTDVRF
Sbjct: 61  FYKSNNNRVVCVKNMDPEEIHLCAMRLRNALGRKVVKLRTRHVTKNPSVQGTWNTDVRF 119

[Close]

BLAST of Cucsat.G16592 vs. NCBI nr
Match: XP_008454040.1 (PREDICTED: 54S ribosomal protein L51, mitochondrial [Cucumis melo] >XP_008454041.1 PREDICTED: 54S ribosomal protein L51, mitochondrial [Cucumis melo])

HSP 1 Score: 239 bits (609), Expect = 2.27e-79
Identity = 114/119 (95.80%), Postives = 117/119 (98.32%), Query Frame = 0


Query: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELIRGQHPHLKG 60
           MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTEL RGQHP+LKG
Sbjct: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELNRGQHPYLKG 60

Query: 61  FFRSNNNRVVCVKNMDPEEIHSCAMRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF 119
           F++SNNNRVVCVKNMDPEEIHSCA RLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF
Sbjct: 61  FYKSNNNRVVCVKNMDPEEIHSCATRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF 119

[Close]

BLAST of Cucsat.G16592 vs. NCBI nr
Match: XP_022979453.1 (54S ribosomal protein L51, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 223 bits (568), Expect = 4.08e-73
Identity = 101/119 (84.87%), Postives = 115/119 (96.64%), Query Frame = 0


Query: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELIRGQHPHLKG 60
           MALRGVWQLKKL+VSYCDWGGSSRGIRAFM+S++PAF+EKNPQL++VTELIRGQHPHLKG
Sbjct: 1   MALRGVWQLKKLIVSYCDWGGSSRGIRAFMDSELPAFREKNPQLQIVTELIRGQHPHLKG 60

Query: 61  FFRSNNNRVVCVKNMDPEEIHSCAMRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF 119
           F++SNN+RV+CVKNMDPE+IH  A RLRN+LGRKV+KLRTRHVTKNPS QGTWNTDVRF
Sbjct: 61  FYKSNNHRVICVKNMDPEDIHLHATRLRNALGRKVLKLRTRHVTKNPSAQGTWNTDVRF 119

[Close]

BLAST of Cucsat.G16592 vs. NCBI nr
Match: XP_022158383.1 (54S ribosomal protein L51, mitochondrial [Momordica charantia])

HSP 1 Score: 222 bits (566), Expect = 8.24e-73
Identity = 103/119 (86.55%), Postives = 115/119 (96.64%), Query Frame = 0


Query: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELIRGQHPHLKG 60
           MALRGVWQL+KL+VSYCDWGGSSRGIRAFM+SQ+PAFKEKNPQLEVVTELIRGQHPHLK 
Sbjct: 1   MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKA 60

Query: 61  FFRSNNNRVVCVKNMDPEEIHSCAMRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF 119
           F+++NN RVVCVKN+DPEEI+  A+RLRN+LGRKV+KLRTRHVTKNPSVQGTWNTDVRF
Sbjct: 61  FYKNNNERVVCVKNLDPEEINLHAVRLRNALGRKVIKLRTRHVTKNPSVQGTWNTDVRF 119

[Close]

BLAST of Cucsat.G16592 vs. ExPASy TrEMBL
Match: A0A0A0KU37 (L51_S25_CI-B8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G011700 PE=3 SV=1)

HSP 1 Score: 248 bits (634), Expect = 1.69e-83
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELIRGQHPHLKG 60
           MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELIRGQHPHLKG
Sbjct: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELIRGQHPHLKG 60

Query: 61  FFRSNNNRVVCVKNMDPEEIHSCAMRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF 119
           FFRSNNNRVVCVKNMDPEEIHSCAMRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF
Sbjct: 61  FFRSNNNRVVCVKNMDPEEIHSCAMRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF 119

[Close]

BLAST of Cucsat.G16592 vs. ExPASy TrEMBL
Match: A0A1S3BXU0 (54S ribosomal protein L51, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103494585 PE=3 SV=1)

HSP 1 Score: 239 bits (609), Expect = 1.10e-79
Identity = 114/119 (95.80%), Postives = 117/119 (98.32%), Query Frame = 0


Query: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELIRGQHPHLKG 60
           MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTEL RGQHP+LKG
Sbjct: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELNRGQHPYLKG 60

Query: 61  FFRSNNNRVVCVKNMDPEEIHSCAMRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF 119
           F++SNNNRVVCVKNMDPEEIHSCA RLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF
Sbjct: 61  FYKSNNNRVVCVKNMDPEEIHSCATRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF 119

[Close]

BLAST of Cucsat.G16592 vs. ExPASy TrEMBL
Match: A0A6J1IW90 (54S ribosomal protein L51, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111479166 PE=3 SV=1)

HSP 1 Score: 223 bits (568), Expect = 1.98e-73
Identity = 101/119 (84.87%), Postives = 115/119 (96.64%), Query Frame = 0


Query: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELIRGQHPHLKG 60
           MALRGVWQLKKL+VSYCDWGGSSRGIRAFM+S++PAF+EKNPQL++VTELIRGQHPHLKG
Sbjct: 1   MALRGVWQLKKLIVSYCDWGGSSRGIRAFMDSELPAFREKNPQLQIVTELIRGQHPHLKG 60

Query: 61  FFRSNNNRVVCVKNMDPEEIHSCAMRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF 119
           F++SNN+RV+CVKNMDPE+IH  A RLRN+LGRKV+KLRTRHVTKNPS QGTWNTDVRF
Sbjct: 61  FYKSNNHRVICVKNMDPEDIHLHATRLRNALGRKVLKLRTRHVTKNPSAQGTWNTDVRF 119

[Close]

BLAST of Cucsat.G16592 vs. ExPASy TrEMBL
Match: A0A6J1DVX7 (54S ribosomal protein L51, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111024881 PE=3 SV=1)

HSP 1 Score: 222 bits (566), Expect = 3.99e-73
Identity = 103/119 (86.55%), Postives = 115/119 (96.64%), Query Frame = 0


Query: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELIRGQHPHLKG 60
           MALRGVWQL+KL+VSYCDWGGSSRGIRAFM+SQ+PAFKEKNPQLEVVTELIRGQHPHLK 
Sbjct: 1   MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKA 60

Query: 61  FFRSNNNRVVCVKNMDPEEIHSCAMRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF 119
           F+++NN RVVCVKN+DPEEI+  A+RLRN+LGRKV+KLRTRHVTKNPSVQGTWNTDVRF
Sbjct: 61  FYKNNNERVVCVKNLDPEEINLHAVRLRNALGRKVIKLRTRHVTKNPSVQGTWNTDVRF 119

[Close]

BLAST of Cucsat.G16592 vs. ExPASy TrEMBL
Match: A0A5A7TSM4 (54S ribosomal protein L51 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G001760 PE=3 SV=1)

HSP 1 Score: 218 bits (554), Expect = 6.34e-71
Identity = 105/110 (95.45%), Postives = 108/110 (98.18%), Query Frame = 0


Query: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELIRGQHPHLKG 60
           MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTEL RGQHP+LKG
Sbjct: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELNRGQHPYLKG 60

Query: 61  FFRSNNNRVVCVKNMDPEEIHSCAMRLRNSLGRKVVKLRTRHVTKNPSVQ 110
           F++SNNNRVVCVKNMDPEEIHSCA RLRNSLGRKVVKLRTRHVTKNPSVQ
Sbjct: 61  FYKSNNNRVVCVKNMDPEEIHSCATRLRNSLGRKVVKLRTRHVTKNPSVQ 110

The following BLAST results are available for this feature:

BLAST of Cucsat.G16592 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UUC8	1.3e-12	27.62	54S ribosomal protein L51, mitochondrial OS=Schizosaccharomyces pombe (strain 97...	[more]
Q758S3	1.9e-11	31.62	54S ribosomal protein L51, mitochondrial OS=Ashbya gossypii (strain ATCC 10895 /...	[more]
Q06090	9.0e-09	28.70	54S ribosomal protein L51, mitochondrial OS=Saccharomyces cerevisiae (strain ATC...	[more]
Q99N89	9.9e-08	31.82	39S ribosomal protein L43, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl43 PE=1...	[more]
Q8N983	4.9e-07	29.73	39S ribosomal protein L43, mitochondrial OS=Homo sapiens OX=9606 GN=MRPL43 PE=1 ...	[more]

BLAST of Cucsat.G16592 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152128.1	3.48e-83	100.00	54S ribosomal protein L51, mitochondrial [Cucumis sativus] >XP_004152129.1 54S r...	[more]
XP_038877046.1	5.57e-80	94.96	54S ribosomal protein L51, mitochondrial [Benincasa hispida]	[more]
XP_008454040.1	2.27e-79	95.80	PREDICTED: 54S ribosomal protein L51, mitochondrial [Cucumis melo] >XP_008454041...	[more]
XP_022979453.1	4.08e-73	84.87	54S ribosomal protein L51, mitochondrial-like [Cucurbita maxima]	[more]
XP_022158383.1	8.24e-73	86.55	54S ribosomal protein L51, mitochondrial [Momordica charantia]	[more]

BLAST of Cucsat.G16592 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KU37	1.69e-83	100.00	L51_S25_CI-B8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G0117...	[more]
A0A1S3BXU0	1.10e-79	95.80	54S ribosomal protein L51, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103494585...	[more]
A0A6J1IW90	1.98e-73	84.87	54S ribosomal protein L51, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1DVX7	3.99e-73	86.55	54S ribosomal protein L51, mitochondrial OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A5A7TSM4	6.34e-71	95.45	54S ribosomal protein L51 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007741	Ribosomal protein/NADH dehydrogenase domain	SMART	SM00916	L51_S25_CI_B8_2	coord: 38..111 e-value: 1.0E-14 score: 64.9
IPR007741	Ribosomal protein/NADH dehydrogenase domain	PFAM	PF05047	L51_S25_CI-B8	coord: 46..96 e-value: 3.4E-8 score: 33.3
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 13..138 e-value: 8.2E-44 score: 151.0
IPR039927	39S ribosomal protein L43/54S ribosomal protein L51	PANTHER	PTHR21396	39S RIBOSOMAL PROTEIN L43	coord: 21..137
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 28..110

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G16592.T6	Cucsat.G16592.T6	mRNA
Cucsat.G16592.T1	Cucsat.G16592.T1	mRNA
Cucsat.G16592.T3	Cucsat.G16592.T3	mRNA
Cucsat.G16592.T2	Cucsat.G16592.T2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032543	mitochondrial translation
cellular_component	GO:0005762	mitochondrial large ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome