Cucsat.G14820 (gene) Cucumber (B10) v3

Overview
NameCucsat.G14820
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionPentatricopeptide repeat
Locationctg1869: 5410477 .. 5411399 (+)
RNA-Seq ExpressionCucsat.G14820
SyntenyCucsat.G14820
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TCAATTTAATTGACGAAATTTGTGATTTAACCATTTTTCAATAATAAAATCAAGGAGTGGTTTGATTTGGGAAAAAATATATAAGGAGCAGAGTCTTTGAATGAGACTTTGCAAGGAGCAGAGTCGAGTTGAGTCTGAGAGGAAATGAAGAGAATACGGCAACAGCTTCTTACCCTACAACGTCTTCCACTCTCACCAGAGCTCCTCCGCTTTCAAATTCCCGCCATTCTTTCTCCATTTTCTTCTTCTTCCTCCTTCATTTCCGATTCTCCATCAGCTTCCATAGCCACCAAACCCAATACCACTCTGACCCACGACGAGCTCACAAGGATCAATCTCCTTCTTCCTCGTCTCTGTCTCCACAACCACCTTTCTACTGCTATCTCTCTTCTCCACGCCACTCTCCTCACCAATCCTTCACTTCACTCTCTTTCCCTTTCAGTTCTCTCCCACTCACTTGCTTCCCAGTCCGATTTTGCCCTCACAATGTCCCTCCTCACTCGTCTTAAGCACCATCCCAATGCCCTTCTCTATTCAACCCCTATCGTCACTATGCTTATTTCCTCTTATTGCAAACGCCGGAAATCCAAGGAGGCGTTGAAGCTTTTCCATTGGATGCTGAGACCGGGGTCGCCATGTAAGCCGGAAGAGAGGGTTTATAAAACCCTAATTGCGGGACTTTATAGGAAGGGTATGACATTTGATGCTTTGAAGGTTCTCAGGAATATGATTGATTCGAATTTGGTTCCGGATTGCGATTTGAGAAATTGGGTTTTTAGGTCTTTGCTGAAAGAAGCGATGATCCCCGAAGCCATGGAGTTTAATGATGCTTTGAATTTCGTTGGCGATCAGAATACAATTGACCATCTTCGAAGGGTGTCGGAATTGTTGAATCGTATCATCACCAATTGGATAGACTAGAGAAGATCTTCTGGTAAGCCATTTGCTCTCTGTCATTCTATTAATTTTTCACCATCTCTAGACTCTAATTTTGACGATATTTAGAATATAGCGGATGATTGAGTCAAGCAATTTGTTGATCATAAGCAGACAGACCTTACAATGCATTTATAAGGATTCAGCAACTTTATCACGGGATAGTCTACTGCATGATCTATTAAAGTGCATATAAAATTGGGAAGCTTGGTATCAATTATCTGATTGGTAATATTGAATTCTTTTTACTTCTTTGTATTGTGTTGTATAGTTAATTAGCAGAGTAGTTTTGTGACATTTGCTGCCATTTCATTTCAAAAGCTAGACCACATAAAGTAATTCCACACAAAAGGATTAGCATTTAAGCTAGTTAAACTATAAGCTAAAAATAAAGGGCAAGCTTCTAAACCATGTCATTCTCCCTCAACAAAGTGTAATTTCTGCATCCTTCTTGCAACTTGAATTGATATAATTGAAAGCTTAAAGCTTAGATAGCATGTAGCTAGAAGGAGAAGAGAAAGAAGAATAACAAAAACAGATATTATGGATTGTTTATGTTTAAGTGAGCATGGATAAGACAGGTTAAAGTTGATGGATTATGATAAATTTGATAGATAAGTAGTGACATTTTCTCTTGTTCAGCTTCAACAAATTTTCAAGTTTACAATGGAGGGAAAATATTTCATAACTCATCAACTTATGCGTATAACATGATTAGCGATTCAATAGCTTTTAAATTTTAGTTACTTTTCTTATATAGCTGGGTGCTAATCTAAGAGTTCAAAATCTTGCAGTATCAGGTTCCTTTCCTGGAGAAGGAAGAGAAACTTGGTCGTTACCGGTGTATTCAATTTCCAGGGAGAGGAAAGGCAGTGATGCAGGACCCCATAGTTTTCACAAATCTTCAAAGTAGAAAGGCTTGAGCATCAAGTTCACATCAAATGTTACAAACTGGGATAAACAGCTGCAGAAATTGAGGGTATAATGTAACATAATGGTGGTTAAATGTCCCTGCAACCCAAGTGGAGGTTAACTACATAATTTTTTCTCTGTTTAGTATCATCATTTTGGACATGGGGTTTCAATAGAATCTTCGCAAAGTTCTCTCAGTTGGTGGTGGGTACTAAGCATTACCTAATTCAAACTCGTTAAGACACAAGTAGGTGGGCGTTCCAACTTGAAGTCTCACTCGTTCGAGTTTAGGGAAGAAAAACATCAAACTCCAGTCAAAAGTTTGAATGTACTCGTCAGCAATTTTGAACTTGATAAAAAACACTGTCTTGTTTTATTTTTAATGTGAATATTGTATCGGTTAACTTCGAGACATTTTTATGTTCCGTATGAAATTTAAATTCGAATACATATTTCAAT

Coding sequence (CDS)

ATGAAGAGAATACGGCAACAGCTTCTTACCCTACAACGTCTTCCACTCTCACCAGAGCTCCTCCGCTTTCAAATTCCCGCCATTCTTTCTCCATTTTCTTCTTCTTCCTCCTTCATTTCCGATTCTCCATCAGCTTCCATAGCCACCAAACCCAATACCACTCTGACCCACGACGAGCTCACAAGGATCAATCTCCTTCTTCCTCGTCTCTGTCTCCACAACCACCTTTCTACTGCTATCTCTCTTCTCCACGCCACTCTCCTCACCAATCCTTCACTTCACTCTCTTTCCCTTTCAGTTCTCTCCCACTCACTTGCTTCCCAGTCCGATTTTGCCCTCACAATGTCCCTCCTCACTCGTCTTAAGCACCATCCCAATGCCCTTCTCTATTCAACCCCTATCGTCACTATGCTTATTTCCTCTTATTGCAAACGCCGGAAATCCAAGGAGGCGTTGAAGCTTTTCCATTGGATGCTGAGACCGGGGTCGCCATGTAAGCCGGAAGAGAGGGTTTATAAAACCCTAATTGCGGGACTTTATAGGAAGGGTATGACATTTGATGCTTTGAAGGTTCTCAGGAATATGATTGATTCGAATTTGGTTCCGGATTGCGATTTGAGAAATTGGGTTTTTAGGTCTTTGCTGAAAGAAGCGATGATCCCCGAAGCCATGGAGTTTAATGATGCTTTGAATTTCGTTGGCGATCAGAATACAATTGACCATCTTCGAAGGGTGTCGGAATTGTTGAATCGTATCATCACCAATTGGATAGACTAG

Protein sequence

MKRIRQQLLTLQRLPLSPELLRFQIPAILSPFSSSSSFISDSPSASIATKPNTTLTHDELTRINLLLPRLCLHNHLSTAISLLHATLLTNPSLHSLSLSVLSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTMLISSYCKRRKSKEALKLFHWMLRPGSPCKPEERVYKTLIAGLYRKGMTFDALKVLRNMIDSNLVPDCDLRNWVFRSLLKEAMIPEAMEFNDALNFVGDQNTIDHLRRVSELLNRIITNWID
Homology
[Close]
BLAST of Cucsat.G14820 vs. ExPASy Swiss-Prot
Match: Q84JF5 (Protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 OS=Arabidopsis thaliana OX=3702 GN=PTAC14 PE=1 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 5.0e-35
Identity = 69/99 (69.70%), Postives = 89/99 (89.90%), Query Frame = 0 

Query: 8   DTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKELQEECQRMLAAFPTTSDKDQKMLD 67
           DTFVDGAVIAAAR+LP+WSD D+PP PS ERKAVKELQ+EC++MLA +PTT+++DQK+LD
Sbjct: 385 DTFVDGAVIAAARTLPTWSDIDLPPIPSAERKAVKELQDECRKMLAEYPTTAEQDQKLLD 444

Query: 68  SMSQATRTLEASIKYRLHRKLFIEKVIKALDVYQERILF 107
           SMS+A  T   ++KYR+HRK+FI K+IKALD+YQER+L+
Sbjct: 445 SMSEARTTFATAVKYRMHRKMFIGKIIKALDIYQERLLY 483

[Close]
BLAST of Cucsat.G14820 vs. NCBI nr
Match: XP_004154058.1 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X2 [Cucumis sativus] >KGN64454.1 hypothetical protein Csa_013765 [Cucumis sativus])

HSP 1 Score: 197 bits (501), Expect = 1.13e-58
Identity = 102/104 (98.08%), Postives = 102/104 (98.08%), Query Frame = 0 

Query: 3   LQRKEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKELQEECQRMLAAFPTTSDKD 62
           L  KEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKELQEECQRMLAAFPTTSDKD
Sbjct: 379 LSSKEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKELQEECQRMLAAFPTTSDKD 438

Query: 63  QKMLDSMSQATRTLEASIKYRLHRKLFIEKVIKALDVYQERILF 106
           QKMLDSMSQATRTLEASIKYRLHRKLFIEKVIKALDVYQERILF
Sbjct: 439 QKMLDSMSQATRTLEASIKYRLHRKLFIEKVIKALDVYQERILF 482

[Close]
BLAST of Cucsat.G14820 vs. NCBI nr
Match: XP_031745996.1 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X1 [Cucumis sativus])

HSP 1 Score: 197 bits (501), Expect = 1.15e-58
Identity = 102/104 (98.08%), Postives = 102/104 (98.08%), Query Frame = 0 

Query: 3   LQRKEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKELQEECQRMLAAFPTTSDKD 62
           L  KEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKELQEECQRMLAAFPTTSDKD
Sbjct: 380 LSSKEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKELQEECQRMLAAFPTTSDKD 439

Query: 63  QKMLDSMSQATRTLEASIKYRLHRKLFIEKVIKALDVYQERILF 106
           QKMLDSMSQATRTLEASIKYRLHRKLFIEKVIKALDVYQERILF
Sbjct: 440 QKMLDSMSQATRTLEASIKYRLHRKLFIEKVIKALDVYQERILF 483

[Close]
BLAST of Cucsat.G14820 vs. NCBI nr
Match: XP_038876975.1 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X3 [Benincasa hispida])

HSP 1 Score: 193 bits (490), Expect = 6.56e-58
Identity = 99/104 (95.19%), Postives = 102/104 (98.08%), Query Frame = 0 

Query: 3   LQRKEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKELQEECQRMLAAFPTTSDKD 62
           L  KEDTFVDGAVIAAARSLPSWSDGDIPPSPSRE+KAVKELQEECQRMLAAFPTTS+KD
Sbjct: 292 LSDKEDTFVDGAVIAAARSLPSWSDGDIPPSPSREKKAVKELQEECQRMLAAFPTTSEKD 351

Query: 63  QKMLDSMSQATRTLEASIKYRLHRKLFIEKVIKALDVYQERILF 106
           QK+LDSMSQATRTLEASIKYRLHRKLFIEKVIKALDVYQERILF
Sbjct: 352 QKLLDSMSQATRTLEASIKYRLHRKLFIEKVIKALDVYQERILF 395

[Close]
BLAST of Cucsat.G14820 vs. NCBI nr
Match: XP_008440293.1 (PREDICTED: protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X2 [Cucumis melo])

HSP 1 Score: 194 bits (493), Expect = 1.74e-57
Identity = 99/104 (95.19%), Postives = 103/104 (99.04%), Query Frame = 0 

Query: 3   LQRKEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKELQEECQRMLAAFPTTSDKD 62
           L +KEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKELQEECQRMLAAFPTTS+KD
Sbjct: 379 LSKKEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKELQEECQRMLAAFPTTSEKD 438

Query: 63  QKMLDSMSQATRTLEASIKYRLHRKLFIEKVIKALDVYQERILF 106
           QK+LDSMSQATRTLEASIKYRLHRKLFI+KVIKALDVYQERILF
Sbjct: 439 QKLLDSMSQATRTLEASIKYRLHRKLFIKKVIKALDVYQERILF 482

[Close]
BLAST of Cucsat.G14820 vs. NCBI nr
Match: XP_008440286.1 (PREDICTED: protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X1 [Cucumis melo] >XP_016899492.1 PREDICTED: protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X1 [Cucumis melo] >XP_016899493.1 PREDICTED: protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X1 [Cucumis melo])

HSP 1 Score: 194 bits (493), Expect = 1.85e-57
Identity = 99/104 (95.19%), Postives = 103/104 (99.04%), Query Frame = 0 

Query: 3   LQRKEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKELQEECQRMLAAFPTTSDKD 62
           L +KEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKELQEECQRMLAAFPTTS+KD
Sbjct: 382 LSKKEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKELQEECQRMLAAFPTTSEKD 441

Query: 63  QKMLDSMSQATRTLEASIKYRLHRKLFIEKVIKALDVYQERILF 106
           QK+LDSMSQATRTLEASIKYRLHRKLFI+KVIKALDVYQERILF
Sbjct: 442 QKLLDSMSQATRTLEASIKYRLHRKLFIKKVIKALDVYQERILF 485

[Close]
BLAST of Cucsat.G14820 vs. ExPASy TrEMBL
Match: A0A0A0LTZ8 (SET domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G051910 PE=4 SV=1)

HSP 1 Score: 197 bits (501), Expect = 5.45e-59
Identity = 102/104 (98.08%), Postives = 102/104 (98.08%), Query Frame = 0 

Query: 3   LQRKEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKELQEECQRMLAAFPTTSDKD 62
           L  KEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKELQEECQRMLAAFPTTSDKD
Sbjct: 379 LSSKEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKELQEECQRMLAAFPTTSDKD 438

Query: 63  QKMLDSMSQATRTLEASIKYRLHRKLFIEKVIKALDVYQERILF 106
           QKMLDSMSQATRTLEASIKYRLHRKLFIEKVIKALDVYQERILF
Sbjct: 439 QKMLDSMSQATRTLEASIKYRLHRKLFIEKVIKALDVYQERILF 482

[Close]
BLAST of Cucsat.G14820 vs. ExPASy TrEMBL
Match: A0A1S3B1I5 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484777 PE=4 SV=1)

HSP 1 Score: 194 bits (493), Expect = 8.40e-58
Identity = 99/104 (95.19%), Postives = 103/104 (99.04%), Query Frame = 0 

Query: 3   LQRKEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKELQEECQRMLAAFPTTSDKD 62
           L +KEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKELQEECQRMLAAFPTTS+KD
Sbjct: 379 LSKKEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKELQEECQRMLAAFPTTSEKD 438

Query: 63  QKMLDSMSQATRTLEASIKYRLHRKLFIEKVIKALDVYQERILF 106
           QK+LDSMSQATRTLEASIKYRLHRKLFI+KVIKALDVYQERILF
Sbjct: 439 QKLLDSMSQATRTLEASIKYRLHRKLFIKKVIKALDVYQERILF 482

[Close]
BLAST of Cucsat.G14820 vs. ExPASy TrEMBL
Match: A0A1S3B0Q7 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484777 PE=4 SV=1)

HSP 1 Score: 194 bits (493), Expect = 8.96e-58
Identity = 99/104 (95.19%), Postives = 103/104 (99.04%), Query Frame = 0 

Query: 3   LQRKEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKELQEECQRMLAAFPTTSDKD 62
           L +KEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKELQEECQRMLAAFPTTS+KD
Sbjct: 382 LSKKEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKELQEECQRMLAAFPTTSEKD 441

Query: 63  QKMLDSMSQATRTLEASIKYRLHRKLFIEKVIKALDVYQERILF 106
           QK+LDSMSQATRTLEASIKYRLHRKLFI+KVIKALDVYQERILF
Sbjct: 442 QKLLDSMSQATRTLEASIKYRLHRKLFIKKVIKALDVYQERILF 485

[Close]
BLAST of Cucsat.G14820 vs. ExPASy TrEMBL
Match: A0A6J1KEJ3 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 OS=Cucurbita maxima OX=3661 GN=LOC111495109 PE=4 SV=1)

HSP 1 Score: 188 bits (478), Expect = 1.44e-55
Identity = 96/104 (92.31%), Postives = 101/104 (97.12%), Query Frame = 0 

Query: 3   LQRKEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKELQEECQRMLAAFPTTSDKD 62
           L  +EDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKELQEECQRMLAAFPTTS++D
Sbjct: 380 LSNEEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKELQEECQRMLAAFPTTSEQD 439

Query: 63  QKMLDSMSQATRTLEASIKYRLHRKLFIEKVIKALDVYQERILF 106
           QK+LDSM QATRTLEASIKYRLHRKLF+EKVIKALDVYQERILF
Sbjct: 440 QKILDSMPQATRTLEASIKYRLHRKLFMEKVIKALDVYQERILF 483

[Close]
BLAST of Cucsat.G14820 vs. ExPASy TrEMBL
Match: A0A6J1E7Q3 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 OS=Cucurbita moschata OX=3662 GN=LOC111431496 PE=4 SV=1)

HSP 1 Score: 188 bits (478), Expect = 1.44e-55
Identity = 96/104 (92.31%), Postives = 101/104 (97.12%), Query Frame = 0 

Query: 3   LQRKEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKELQEECQRMLAAFPTTSDKD 62
           L  +EDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKELQEECQRMLAAFPTTS++D
Sbjct: 380 LSNEEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKELQEECQRMLAAFPTTSEQD 439

Query: 63  QKMLDSMSQATRTLEASIKYRLHRKLFIEKVIKALDVYQERILF 106
           QK+LDSM QATRTLEASIKYRLHRKLF+EKVIKALDVYQERILF
Sbjct: 440 QKILDSMPQATRTLEASIKYRLHRKLFMEKVIKALDVYQERILF 483

The following BLAST results are available for this feature:
BLAST of Cucsat.G14820 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q84JF55.0e-3569.70Protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 OS=Arabidopsis thaliana OX=3702 GN=P... [more]
BLAST of Cucsat.G14820 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004154058.11.13e-5898.08protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X2 [Cucumis sativus] >KGN644... [more]
XP_031745996.11.15e-5898.08protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X1 [Cucumis sativus][more]
XP_038876975.16.56e-5895.19protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X3 [Benincasa hispida][more]
XP_008440293.11.74e-5795.19PREDICTED: protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X2 [Cucumis melo][more]
XP_008440286.11.85e-5795.19PREDICTED: protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X1 [Cucumis melo]... [more]
BLAST of Cucsat.G14820 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LTZ85.45e-5998.08SET domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G051910 PE=4 SV... [more]
A0A1S3B1I58.40e-5895.19protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X2 OS=Cucumis melo OX=3656 G... [more]
A0A1S3B0Q78.96e-5895.19protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X1 OS=Cucumis melo OX=3656 G... [more]
A0A6J1KEJ31.44e-5592.31protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 OS=Cucurbita maxima OX=3661 GN=LOC11... [more]
A0A6J1E7Q31.44e-5592.31protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 OS=Cucurbita moschata OX=3662 GN=LOC... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 136..180
e-value: 5.0E-8
score: 33.0
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 136..156
e-value: 4.2E-4
score: 18.3
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 131..165
score: 9.04313
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 40..185
e-value: 7.9E-11
score: 43.6
NoneNo IPR availablePANTHERPTHR47932:SF1SUBFAMILY NOT NAMEDcoord: 137..171
NoneNo IPR availablePANTHERPTHR47932ATPASE EXPRESSION PROTEIN 3coord: 137..171

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G14820.T20Cucsat.G14820.T20mRNA
Cucsat.G14820.T12Cucsat.G14820.T12mRNA
Cucsat.G14820.T11Cucsat.G14820.T11mRNA
Cucsat.G14820.T4Cucsat.G14820.T4mRNA
Cucsat.G14820.T21Cucsat.G14820.T21mRNA
Cucsat.G14820.T13Cucsat.G14820.T13mRNA
Cucsat.G14820.T14Cucsat.G14820.T14mRNA
Cucsat.G14820.T15Cucsat.G14820.T15mRNA
Cucsat.G14820.T9Cucsat.G14820.T9mRNA
Cucsat.G14820.T8Cucsat.G14820.T8mRNA
Cucsat.G14820.T3Cucsat.G14820.T3mRNA
Cucsat.G14820.T1Cucsat.G14820.T1mRNA
Cucsat.G14820.T7Cucsat.G14820.T7mRNA
Cucsat.G14820.T6Cucsat.G14820.T6mRNA
Cucsat.G14820.T5Cucsat.G14820.T5mRNA
Cucsat.G14820.T19Cucsat.G14820.T19mRNA
Cucsat.G14820.T18Cucsat.G14820.T18mRNA
Cucsat.G14820.T10Cucsat.G14820.T10mRNA
Cucsat.G14820.T17Cucsat.G14820.T17mRNA
Cucsat.G14820.T16Cucsat.G14820.T16mRNA
Cucsat.G14820.T2Cucsat.G14820.T2mRNA
Cucsat.G14820.T23Cucsat.G14820.T23mRNA
Cucsat.G14820.T22Cucsat.G14820.T22mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009658 chloroplast organization
biological_process GO:0018026 peptidyl-lysine monomethylation
biological_process GO:0042793 plastid transcription
biological_process GO:0009416 response to light stimulus
biological_process GO:0010027 thylakoid membrane organization
cellular_component GO:0009534 chloroplast thylakoid
cellular_component GO:0000427 plastid-encoded plastid RNA polymerase complex
molecular_function GO:0005515 protein binding
molecular_function GO:0016279 protein-lysine N-methyltransferase activity