Cucsat.G14820.T15 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G14820.T15
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Pentatricopeptide repeat
Location	ctg1869: 5404372 .. 5406599 (+)
RNA-Seq Expression	Cucsat.G14820.T15
Synteny	Cucsat.G14820.T15

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TATAAGGAGCAGAGTCTTTGAATGAGACTTTGCAAGGAGCAGAGTCGAGTTGAGTCTGAGAGGAAATGAAGAGAATACGGCAACAGCTTCTTACCCTACAACGTCTTCCACTCTCACCAGAGCTCCTCCGCTTTCAAATTCCCGCCATTCTTTCTCCATTTTCTTCTTCTTCCTCCTTCATTTCCGATTCTCCATCAGCTTCCATAGCCACCAAACCCAATACCACTCTGACCCACGACGAGCTCACAAGGATCAATCTCCTTCTTCCTCGTCTCTGTCTCCACAACCACCTTTCTACTGCTATCTCTCTTCTCCACGCCACTCTCCTCACCAATCCTTCACTTCACTCTCTTTCCCTTTCAGTTCTCTCCCACTCACTTGCTTCCCAGTCCGATTTTGCCCTCACAATGTCCCTCCTCACTCGTCTTAAGCACCATCCCAATGCCCTTCTCTATTCAACCCCTATCGTCACTATGCTTATTTCCTCTTATTGCAAACGCCGGAAATCCAAGGAGGCGTTGAAGCTTTTCCATTGGATGCTGAGACCGGGGTCGCCATGTAAGCCGGAAGAGAGGGTTTATAAAACCCTAATTGCGGGACTTTATAGGAAGGGTATGACATTTGATGCTTTGAAGGTTCTCAGGAATATGATTGATTCGAATTTGGTTCCGGATTGCGATTTGAGAAATTGGGTTTTTAGGTCTTTGCTGAAAGAAGCGATGATCCCCGAAGCCATGGAGTTTAATGATGCTTTGAATTTCGTTGGCGATCAGAATACAATTGACCATCTTCGAAGGGTGTCGGAATTGTTGAATCGTATCATCACCAATTGGATAGACTAGAGAAGATCTTCTGGTAAGCCATTTGCTCTCTGTCATTCTATTAATTTTTCACCATCTCTAGACTCTAATTTTGACGATATTTAGAATATAGCGGATGATTGAGTCAAGCAATTTGTTGATCATAAGCAGACAGACCTTACAATGCATTTATAAGGATTCAGCAACTTTATCACGGGATAGTCTACTGCATGATCTATTAAAGTGCATATAAAATTGGGAAGCTTGGTATCAATTATCTGATTGGTAATATTGAATTCTTTTTACTTCTTTGTATTGTGTTGTATAGTTAATTAGCAGAGTAGTTTTGTGACATTTGCTGCCATTTCATTTCAAAAGCTAGACCACATAAAGTAATTCCACACAAAAGGATTAGCATTTAAGCTAGTTAAACTATAAGCTAAAAATAAAGGGCAAGCTTCTAAACCATGTCATTCTCCCTCAACAAAGTGTAATTTCTGCATCCTTCTTGCAACTTGAATTGATATAATTGAAAGCTTAAAGCTTAGATAGCATGTAGCTAGAAGGAGAAGAGAAAGAAGAATAACAAAAACAGATATTATGGATTGTTTATGTTTAAGTGAGCATGGATAAGACAGGTTAAAGTTGATGGATTATGATAAATTTGATAGATAAGTAGTGACATTTTCTCTTGTTCAGCTTCAACAAATTTTCAAGTTTACAATGGAGGGAAAATATTTCATAACTCATCAACTTATGCGTATAACATGATTAGCGATTCAATAGCTTTTAAATTTTAGTTACTTTTCTTATATAGCTGGGTGCTAATCTAAGAGTTCAAAATCTTGCAGTATCAGGTTCCTTTCCTGGAGAAGGAAGAGAAACTTGGTCGTTACCGGTGTATTCAATTTCCAGGGAGAGGAAAGGCAGTGATGCAGGACCCCATAGTTTTCACAAATCTTCAAAGTAGAAAGGCTTGAGCATCAAGTTCACATCAAATGTTACAAACTGGGATAAACAGCTGCAGAAATTGAGGGTATAATGTAACATAATGGTGGTTAAATGTCCCTGCAACCCAAGTGGAGGTTAACTACATAATTTTTTCTCTGTTTAGTATCATCATTTTGGACATGGGGTTTCAATAGAATCTTCGCAAAGTTCTCTCAGTTGGTGGTGGGTACTAAGCATTACCTAATTCAAACTCGTTAAGACACAAGTAGGTGGGCGTTCCAACTTGAAGTCTCACTCGTTCGAGTTTAGGGAAGAAAAACATCAAACTCCAGTCAAAAGTTTGAATGTACTCGTCAGCAATTTTGAACTTGATAAAAAACACTGTCTTGTTTTATTTTTAATGTGAATATTGTATCGGTTAACTTCGAGACATTTTTATGTTCCGTATGAAATTTAAATTCGAATACATATTTCAAT

Coding sequence (CDS)

ATGAAGAGAATACGGCAACAGCTTCTTACCCTACAACGTCTTCCACTCTCACCAGAGCTCCTCCGCTTTCAAATTCCCGCCATTCTTTCTCCATTTTCTTCTTCTTCCTCCTTCATTTCCGATTCTCCATCAGCTTCCATAGCCACCAAACCCAATACCACTCTGACCCACGACGAGCTCACAAGGATCAATCTCCTTCTTCCTCGTCTCTGTCTCCACAACCACCTTTCTACTGCTATCTCTCTTCTCCACGCCACTCTCCTCACCAATCCTTCACTTCACTCTCTTTCCCTTTCAGTTCTCTCCCACTCACTTGCTTCCCAGTCCGATTTTGCCCTCACAATGTCCCTCCTCACTCGTCTTAAGCACCATCCCAATGCCCTTCTCTATTCAACCCCTATCGTCACTATGCTTATTTCCTCTTATTGCAAACGCCGGAAATCCAAGGAGGCGTTGAAGCTTTTCCATTGGATGCTGAGACCGGGGTCGCCATGTAAGCCGGAAGAGAGGGTTTATAAAACCCTAATTGCGGGACTTTATAGGAAGGGTCTTTGCTGA

Protein sequence

MKRIRQQLLTLQRLPLSPELLRFQIPAILSPFSSSSSFISDSPSASIATKPNTTLTHDELTRINLLLPRLCLHNHLSTAISLLHATLLTNPSLHSLSLSVLSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTMLISSYCKRRKSKEALKLFHWMLRPGSPCKPEERVYKTLIAGLYRKGLC

Homology

[Close]

BLAST of Cucsat.G14820.T15 vs. NCBI nr
Match: XP_004154059.1 (putative pentatricopeptide repeat-containing protein At5g59900 [Cucumis sativus] >KGN64453.1 hypothetical protein Csa_014366 [Cucumis sativus])

HSP 1 Score: 342 bits (878), Expect = 3.96e-117
Identity = 183/184 (99.46%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 1   MKRIRQQLLTLQRLPLSPELLRFQIPAILSPFSSSSSFISDSPSASIATKPNTTLTHDEL 60
           MKRIRQQLLTLQRLPLSPELLRFQIPAILSPFSSSSSFISDSPSASIATKPNTTLTHDEL
Sbjct: 1   MKRIRQQLLTLQRLPLSPELLRFQIPAILSPFSSSSSFISDSPSASIATKPNTTLTHDEL 60

Query: 61  TRINLLLPRLCLHNHLSTAISLLHATLLTNPSLHSLSLSVLSHSLASQSDFALTMSLLTR 120
           TRINLLLPRLCLHNHLSTAISLLHATLLTNPSLHSLSLSVLSHSLASQSDFALTMSLLTR
Sbjct: 61  TRINLLLPRLCLHNHLSTAISLLHATLLTNPSLHSLSLSVLSHSLASQSDFALTMSLLTR 120

Query: 121 LKHHPNALLYSTPIVTMLISSYCKRRKSKEALKLFHWMLRPGSPCKPEERVYKTLIAGLY 180
           LKHHPNALLYSTPIVTMLISSYCKRRKSKEALKLFHWMLRPGSPCKPEERVYKTLIAGLY
Sbjct: 121 LKHHPNALLYSTPIVTMLISSYCKRRKSKEALKLFHWMLRPGSPCKPEERVYKTLIAGLY 180

Query: 181 RKGL 184
           RKG+
Sbjct: 181 RKGM 184

[Close]

BLAST of Cucsat.G14820.T15 vs. NCBI nr
Match: KAA0055365.1 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 329 bits (843), Expect = 1.43e-105
Identity = 176/184 (95.65%), Postives = 181/184 (98.37%), Query Frame = 0


Query: 1   MKRIRQQLLTLQRLPLSPELLRFQIPAILSPFSSSSSFISDSPSASIATKPNTTLTHDEL 60
           MKRIRQQLLTLQRLPLSPELLRFQIP ILSPFSSSSSFIS SPSASIAT+PNTTLTHDEL
Sbjct: 1   MKRIRQQLLTLQRLPLSPELLRFQIPPILSPFSSSSSFISGSPSASIATEPNTTLTHDEL 60

Query: 61  TRINLLLPRLCLHNHLSTAISLLHATLLTNPSLHSLSLSVLSHSLASQSDFALTMSLLTR 120
           TRINLLLPRLCL+NHLSTAI+LLHATLLTNPSL SLSLSVLSHSLASQSDFALTMSLLTR
Sbjct: 61  TRINLLLPRLCLYNHLSTAITLLHATLLTNPSLQSLSLSVLSHSLASQSDFALTMSLLTR 120

Query: 121 LKHHPNALLYSTPIVTMLISSYCKRRKSKEALKLFHWMLRPGSPCKPEERVYKTLIAGLY 180
           LKHHPNALLYSTPIVTMLISSYCKRRKSKEALK+FHWMLRPGSPCKPEERVYKTLIAGLY
Sbjct: 121 LKHHPNALLYSTPIVTMLISSYCKRRKSKEALKIFHWMLRPGSPCKPEERVYKTLIAGLY 180

Query: 181 RKGL 184
           RKG+
Sbjct: 181 RKGM 184

[Close]

BLAST of Cucsat.G14820.T15 vs. NCBI nr
Match: TYJ99292.1 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 329 bits (843), Expect = 3.20e-105
Identity = 176/184 (95.65%), Postives = 181/184 (98.37%), Query Frame = 0


Query: 1   MKRIRQQLLTLQRLPLSPELLRFQIPAILSPFSSSSSFISDSPSASIATKPNTTLTHDEL 60
           MKRIRQQLLTLQRLPLSPELLRFQIP ILSPFSSSSSFIS SPSASIAT+PNTTLTHDEL
Sbjct: 1   MKRIRQQLLTLQRLPLSPELLRFQIPPILSPFSSSSSFISGSPSASIATEPNTTLTHDEL 60

Query: 61  TRINLLLPRLCLHNHLSTAISLLHATLLTNPSLHSLSLSVLSHSLASQSDFALTMSLLTR 120
           TRINLLLPRLCL+NHLSTAI+LLHATLLTNPSL SLSLSVLSHSLASQSDFALTMSLLTR
Sbjct: 61  TRINLLLPRLCLYNHLSTAITLLHATLLTNPSLQSLSLSVLSHSLASQSDFALTMSLLTR 120

Query: 121 LKHHPNALLYSTPIVTMLISSYCKRRKSKEALKLFHWMLRPGSPCKPEERVYKTLIAGLY 180
           LKHHPNALLYSTPIVTMLISSYCKRRKSKEALK+FHWMLRPGSPCKPEERVYKTLIAGLY
Sbjct: 121 LKHHPNALLYSTPIVTMLISSYCKRRKSKEALKIFHWMLRPGSPCKPEERVYKTLIAGLY 180

Query: 181 RKGL 184
           RKG+
Sbjct: 181 RKGM 184

[Close]

BLAST of Cucsat.G14820.T15 vs. NCBI nr
Match: XP_038876976.1 (pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 260 bits (665), Expect = 1.07e-84
Identity = 147/186 (79.03%), Postives = 162/186 (87.10%), Query Frame = 0


Query: 1   MKRIRQQLLTLQRLPLSPELLRFQIPAILSPFSSSSSFISDSP-SASIATKPNTTLTHDE 60
           MKRIRQ+LL L RLPL P+LL +QIPAI S  SSSSS    +P SASIA++PNTTLTHDE
Sbjct: 1   MKRIRQRLLPLHRLPLPPQLLCYQIPAIPSSSSSSSSISDSAPASASIASEPNTTLTHDE 60

Query: 61  L-TRINLLLPRLCLHNHLSTAISLLHATLLTNPSLHSLSLSVLSHSLASQSDFALTMSLL 120
           L T+INLLLPRLC +NH STAI+LL ATLLTNPSL SL LS+LSHSLASQSDFALTMSLL
Sbjct: 61  LITKINLLLPRLCFYNHHSTAIALLDATLLTNPSLQSLPLSILSHSLASQSDFALTMSLL 120

Query: 121 TRLKHHPNALLYSTPIVTMLISSYCKRRKSKEALKLFHWMLRPGSPCKPEERVYKTLIAG 180
           TRL HH NALLYSTPI+TMLI SY KRRKSK+ALK+FHWMLRPGSPCKP+ERVY TLIAG
Sbjct: 121 TRLNHHRNALLYSTPIITMLIFSYSKRRKSKDALKIFHWMLRPGSPCKPDERVYNTLIAG 180

Query: 181 LYRKGL 184
           L RKG+
Sbjct: 181 LCRKGM 186

[Close]

BLAST of Cucsat.G14820.T15 vs. NCBI nr
Match: XP_023000755.1 (pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Cucurbita maxima] >XP_023000756.1 pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Cucurbita maxima] >XP_023000757.1 pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 245 bits (625), Expect = 1.11e-78
Identity = 140/184 (76.09%), Postives = 157/184 (85.33%), Query Frame = 0


Query: 1   MKRIRQQLLTLQRLPLSPELLRFQIPAILSPFSSSSSFISDSPSASIATKPNTTLTHDEL 60
           MK IRQ+LL L+RLPL P+L+  QIPAI +PFSSSSS  S S   S A+K NTTLT DEL
Sbjct: 1   MKTIRQRLLPLRRLPLPPQLVHDQIPAIGTPFSSSSS--SSSVYDSAASKINTTLTQDEL 60

Query: 61  TRINLLLPRLCLHNHLSTAISLLHATLLTNPSLHSLSLSVLSHSLASQSDFALTMSLLTR 120
           T+I+LLLPRLCL+NH STAI+LL   LLTN SL SL LS+LSHSLASQSDFALTMSLLTR
Sbjct: 61  TKISLLLPRLCLYNHHSTAITLLDTALLTNLSLQSLPLSILSHSLASQSDFALTMSLLTR 120

Query: 121 LKHHPNALLYSTPIVTMLISSYCKRRKSKEALKLFHWMLRPGSPCKPEERVYKTLIAGLY 180
           LKHH NALLYS+PI+TMLI SY K+RKSKEALK+FHWMLRPGSPCKP+E VYKTLIAGL 
Sbjct: 121 LKHHRNALLYSSPIITMLIFSYSKQRKSKEALKIFHWMLRPGSPCKPDEMVYKTLIAGLC 180

Query: 181 RKGL 184
           RKG+
Sbjct: 181 RKGM 182

[Close]

BLAST of Cucsat.G14820.T15 vs. ExPASy TrEMBL
Match: A0A0A0LRQ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G051900 PE=4 SV=1)

HSP 1 Score: 342 bits (878), Expect = 1.92e-117
Identity = 183/184 (99.46%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 1   MKRIRQQLLTLQRLPLSPELLRFQIPAILSPFSSSSSFISDSPSASIATKPNTTLTHDEL 60
           MKRIRQQLLTLQRLPLSPELLRFQIPAILSPFSSSSSFISDSPSASIATKPNTTLTHDEL
Sbjct: 1   MKRIRQQLLTLQRLPLSPELLRFQIPAILSPFSSSSSFISDSPSASIATKPNTTLTHDEL 60

Query: 61  TRINLLLPRLCLHNHLSTAISLLHATLLTNPSLHSLSLSVLSHSLASQSDFALTMSLLTR 120
           TRINLLLPRLCLHNHLSTAISLLHATLLTNPSLHSLSLSVLSHSLASQSDFALTMSLLTR
Sbjct: 61  TRINLLLPRLCLHNHLSTAISLLHATLLTNPSLHSLSLSVLSHSLASQSDFALTMSLLTR 120

Query: 121 LKHHPNALLYSTPIVTMLISSYCKRRKSKEALKLFHWMLRPGSPCKPEERVYKTLIAGLY 180
           LKHHPNALLYSTPIVTMLISSYCKRRKSKEALKLFHWMLRPGSPCKPEERVYKTLIAGLY
Sbjct: 121 LKHHPNALLYSTPIVTMLISSYCKRRKSKEALKLFHWMLRPGSPCKPEERVYKTLIAGLY 180

Query: 181 RKGL 184
           RKG+
Sbjct: 181 RKGM 184

[Close]

BLAST of Cucsat.G14820.T15 vs. ExPASy TrEMBL
Match: A0A5A7UP05 (Protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G002100 PE=4 SV=1)

HSP 1 Score: 329 bits (843), Expect = 6.91e-106
Identity = 176/184 (95.65%), Postives = 181/184 (98.37%), Query Frame = 0


Query: 1   MKRIRQQLLTLQRLPLSPELLRFQIPAILSPFSSSSSFISDSPSASIATKPNTTLTHDEL 60
           MKRIRQQLLTLQRLPLSPELLRFQIP ILSPFSSSSSFIS SPSASIAT+PNTTLTHDEL
Sbjct: 1   MKRIRQQLLTLQRLPLSPELLRFQIPPILSPFSSSSSFISGSPSASIATEPNTTLTHDEL 60

Query: 61  TRINLLLPRLCLHNHLSTAISLLHATLLTNPSLHSLSLSVLSHSLASQSDFALTMSLLTR 120
           TRINLLLPRLCL+NHLSTAI+LLHATLLTNPSL SLSLSVLSHSLASQSDFALTMSLLTR
Sbjct: 61  TRINLLLPRLCLYNHLSTAITLLHATLLTNPSLQSLSLSVLSHSLASQSDFALTMSLLTR 120

Query: 121 LKHHPNALLYSTPIVTMLISSYCKRRKSKEALKLFHWMLRPGSPCKPEERVYKTLIAGLY 180
           LKHHPNALLYSTPIVTMLISSYCKRRKSKEALK+FHWMLRPGSPCKPEERVYKTLIAGLY
Sbjct: 121 LKHHPNALLYSTPIVTMLISSYCKRRKSKEALKIFHWMLRPGSPCKPEERVYKTLIAGLY 180

Query: 181 RKGL 184
           RKG+
Sbjct: 181 RKGM 184

[Close]

BLAST of Cucsat.G14820.T15 vs. ExPASy TrEMBL
Match: A0A5D3BHR6 (Protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005050 PE=4 SV=1)

HSP 1 Score: 329 bits (843), Expect = 1.55e-105
Identity = 176/184 (95.65%), Postives = 181/184 (98.37%), Query Frame = 0


Query: 1   MKRIRQQLLTLQRLPLSPELLRFQIPAILSPFSSSSSFISDSPSASIATKPNTTLTHDEL 60
           MKRIRQQLLTLQRLPLSPELLRFQIP ILSPFSSSSSFIS SPSASIAT+PNTTLTHDEL
Sbjct: 1   MKRIRQQLLTLQRLPLSPELLRFQIPPILSPFSSSSSFISGSPSASIATEPNTTLTHDEL 60

Query: 61  TRINLLLPRLCLHNHLSTAISLLHATLLTNPSLHSLSLSVLSHSLASQSDFALTMSLLTR 120
           TRINLLLPRLCL+NHLSTAI+LLHATLLTNPSL SLSLSVLSHSLASQSDFALTMSLLTR
Sbjct: 61  TRINLLLPRLCLYNHLSTAITLLHATLLTNPSLQSLSLSVLSHSLASQSDFALTMSLLTR 120

Query: 121 LKHHPNALLYSTPIVTMLISSYCKRRKSKEALKLFHWMLRPGSPCKPEERVYKTLIAGLY 180
           LKHHPNALLYSTPIVTMLISSYCKRRKSKEALK+FHWMLRPGSPCKPEERVYKTLIAGLY
Sbjct: 121 LKHHPNALLYSTPIVTMLISSYCKRRKSKEALKIFHWMLRPGSPCKPEERVYKTLIAGLY 180

Query: 181 RKGL 184
           RKG+
Sbjct: 181 RKGM 184

[Close]

BLAST of Cucsat.G14820.T15 vs. ExPASy TrEMBL
Match: A0A6J1KEJ7 (pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111495112 PE=4 SV=1)

HSP 1 Score: 245 bits (625), Expect = 5.38e-79
Identity = 140/184 (76.09%), Postives = 157/184 (85.33%), Query Frame = 0


Query: 1   MKRIRQQLLTLQRLPLSPELLRFQIPAILSPFSSSSSFISDSPSASIATKPNTTLTHDEL 60
           MK IRQ+LL L+RLPL P+L+  QIPAI +PFSSSSS  S S   S A+K NTTLT DEL
Sbjct: 1   MKTIRQRLLPLRRLPLPPQLVHDQIPAIGTPFSSSSS--SSSVYDSAASKINTTLTQDEL 60

Query: 61  TRINLLLPRLCLHNHLSTAISLLHATLLTNPSLHSLSLSVLSHSLASQSDFALTMSLLTR 120
           T+I+LLLPRLCL+NH STAI+LL   LLTN SL SL LS+LSHSLASQSDFALTMSLLTR
Sbjct: 61  TKISLLLPRLCLYNHHSTAITLLDTALLTNLSLQSLPLSILSHSLASQSDFALTMSLLTR 120

Query: 121 LKHHPNALLYSTPIVTMLISSYCKRRKSKEALKLFHWMLRPGSPCKPEERVYKTLIAGLY 180
           LKHH NALLYS+PI+TMLI SY K+RKSKEALK+FHWMLRPGSPCKP+E VYKTLIAGL 
Sbjct: 121 LKHHRNALLYSSPIITMLIFSYSKQRKSKEALKIFHWMLRPGSPCKPDEMVYKTLIAGLC 180

Query: 181 RKGL 184
           RKG+
Sbjct: 181 RKGM 182

[Close]

BLAST of Cucsat.G14820.T15 vs. ExPASy TrEMBL
Match: A0A6J1C6B0 (pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC111008811 PE=4 SV=1)

HSP 1 Score: 239 bits (609), Expect = 3.98e-76
Identity = 136/184 (73.91%), Postives = 154/184 (83.70%), Query Frame = 0


Query: 1   MKRIRQQLLTLQRLPLSPELLRFQIPAILSPFSSSSSFISDSPSASIATKPNTTLTHDEL 60
           MK IRQ+L  LQRL L P+ ++ QIPAI SPF SSSS ISDS SAS+A+K NTTLT DEL
Sbjct: 1   MKTIRQRL-PLQRLQLPPQFIQNQIPAIDSPFYSSSS-ISDSESASVASKTNTTLTQDEL 60

Query: 61  TRINLLLPRLCLHNHLSTAISLLHATLLTNPSLHSLSLSVLSHSLASQSDFALTMSLLTR 120
           T+INLLLPRLCLH+H STAI+LL A LLTNPSL SL LS+L+HSLASQSDF   MSLLTR
Sbjct: 61  TKINLLLPRLCLHSHHSTAITLLDAALLTNPSLQSLPLSILAHSLASQSDFTHAMSLLTR 120

Query: 121 LKHHPNALLYSTPIVTMLISSYCKRRKSKEALKLFHWMLRPGSPCKPEERVYKTLIAGLY 180
           LKHH NA LYS+PI+TMLI SYCKRRK +EALK+FHWM RPGSPC P+E+VY TLIAGL 
Sbjct: 121 LKHHRNANLYSSPIITMLIHSYCKRRKFREALKIFHWMGRPGSPCNPDEKVYATLIAGLC 180

Query: 181 RKGL 184
           R G+
Sbjct: 181 RHGM 182

The following BLAST results are available for this feature:

BLAST of Cucsat.G14820.T15 vs.


Match Name	E-value	Identity	Description

BLAST of Cucsat.G14820.T15 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004154059.1	3.96e-117	99.46	putative pentatricopeptide repeat-containing protein At5g59900 [Cucumis sativus]...	[more]
KAA0055365.1	1.43e-105	95.65	protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X2 [Cucumis melo var. makuwa...	[more]
TYJ99292.1	3.20e-105	95.65	protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X1 [Cucumis melo var. makuwa...	[more]
XP_038876976.1	1.07e-84	79.03	pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Benin...	[more]
XP_023000755.1	1.11e-78	76.09	pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Cucur...	[more]

BLAST of Cucsat.G14820.T15 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LRQ9	1.92e-117	99.46	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G051900 PE=4 SV=1	[more]
A0A5A7UP05	6.91e-106	95.65	Protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X2 OS=Cucumis melo var. maku...	[more]
A0A5D3BHR6	1.55e-105	95.65	Protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X1 OS=Cucumis melo var. maku...	[more]
A0A6J1KEJ7	5.38e-79	76.09	pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like OS=Cuc...	[more]
A0A6J1C6B0	3.98e-76	73.91	pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like OS=Mom...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 136..180 e-value: 5.0E-8 score: 33.0
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 136..156 e-value: 4.2E-4 score: 18.3
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 131..165 score: 9.04313
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 40..185 e-value: 7.9E-11 score: 43.6
None	No IPR available	PANTHER	PTHR47932:SF1	SUBFAMILY NOT NAMED	coord: 137..171
None	No IPR available	PANTHER	PTHR47932	ATPASE EXPRESSION PROTEIN 3	coord: 137..171

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G14820	Cucsat.G14820	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G14820.T15.E1	Cucsat.G14820.T15.E1	exon
Cucsat.G14820.T15.E2	Cucsat.G14820.T15.E2	exon
Cucsat.G14820.T15.E3	Cucsat.G14820.T15.E3	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G14820.T15.C1	Cucsat.G14820.T15.C1	CDS
Cucsat.G14820.T15.C2	Cucsat.G14820.T15.C2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G14820.T15	Cucsat.G14820.T15-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0018026	peptidyl-lysine monomethylation
biological_process	GO:0042793	plastid transcription
biological_process	GO:0009416	response to light stimulus
biological_process	GO:0010027	thylakoid membrane organization
cellular_component	GO:0009534	chloroplast thylakoid
cellular_component	GO:0000427	plastid-encoded plastid RNA polymerase complex
molecular_function	GO:0005515	protein binding
molecular_function	GO:0016279	protein-lysine N-methyltransferase activity