Csor.00g163580 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g163580
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr13: 6328798 .. 6329366 (+)
RNA-Seq ExpressionCsor.00g163580
SyntenyCsor.00g163580
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTGGAGTTCGAAGGCTGCAGCAATTCTCTGGATATGAATTTTTTCTTCTTCAAATGTAACCGGAGACGATGTAGTCCATCAGGAATTTTCTTTTGTAGTTGCACGCTCTACTAAGGGGCACATGTAAACCTGATTATAATATTTAAGATTCTCTCTTCGGAAGTCTATACTGCTTAGAAATGGAGGAAATGAGAAGAATTGCATAATTTTCATTGCAATTGTCAGACAGGCACATCCTCAAATCAAACGGGTGCTGGTCGTCTGTAAGGTTAGTGGTTGTTGCTTTTCTGGTGAAGGGTACACACTTCATGATTAAATTTTCATTTTGGCTAAGAACACCATGTGTTCTTTTCGCATGTCAGTTACTGTTTTGTAATGTTCTATTTCGTAGAAAGGGTTTCTGATTGAAAAGGATTTTTGTCAGTGTTATTCCTATTATATTATTCCTCATATGGAAACGCTCTCTTCAAAGGATATCTGCAGGTACTAATAGGTAGATTTGCAGGCTACAAAGGATATCTATCTAGAGCTCAAGAGTAAGCTTGTTCGAGCTTTTTTGGGCTGA

mRNA sequence

ATGGTTGGAGTTCGAAGGCTGCAGCAATTCTCTGGATATGAATTTTTTCTTCTTCAAATAAATGGAGGAAATGAGAAGAATTGCATAATTTTCATTGCAATTGTCAGACAGGCACATCCTCAAATCAAACGGGTGCTGGTCGTCTGTAAGGCTACAAAGGATATCTATCTAGAGCTCAAGAGTAAGCTTGTTCGAGCTTTTTTGGGCTGA

Coding sequence (CDS)

ATGGTTGGAGTTCGAAGGCTGCAGCAATTCTCTGGATATGAATTTTTTCTTCTTCAAATAAATGGAGGAAATGAGAAGAATTGCATAATTTTCATTGCAATTGTCAGACAGGCACATCCTCAAATCAAACGGGTGCTGGTCGTCTGTAAGGCTACAAAGGATATCTATCTAGAGCTCAAGAGTAAGCTTGTTCGAGCTTTTTTGGGCTGA

Protein sequence

MVGVRRLQQFSGYEFFLLQINGGNEKNCIIFIAIVRQAHPQIKRVLVVCKATKDIYLELKSKLVRAFLG
Homology
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BLAST of Csor.00g163580 vs. NCBI nr
Match: KAG6583689.1 (hypothetical protein SDJN03_19621, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 135 bits (340), Expect = 6.77e-40
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0 

Query: 1  MVGVRRLQQFSGYEFFLLQINGGNEKNCIIFIAIVRQAHPQIKRVLVVCKATKDIYLELK 60
          MVGVRRLQQFSGYEFFLLQINGGNEKNCIIFIAIVRQAHPQIKRVLVVCKATKDIYLELK
Sbjct: 1  MVGVRRLQQFSGYEFFLLQINGGNEKNCIIFIAIVRQAHPQIKRVLVVCKATKDIYLELK 60

Query: 61 SKLVRAFLG 69
          SKLVRAFLG
Sbjct: 61 SKLVRAFLG 69

The following BLAST results are available for this feature:
BLAST of Csor.00g163580 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g163580 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6583689.16.77e-40100.00hypothetical protein SDJN03_19621, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g163580 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g163580 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g163580.m01Csor.00g163580.m01mRNA