Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAACTTGAATCCTCGATCATTCATGCAATTCCTTCTTTAGGCTTTCTCTTTCCGACTACTTCTAAAAGAAGGCACCCAATAAAGAAGAAAAAGGTCTTGTCATCGAGATCGACCTCTTTCCGAGGCATTGGAAATCCAGACCGGCTCAGAGAATGGCGCAATTTAGCCCTTCGTTTCGCCAACAAAGAAGTCAGAATCTTTCCCATTCCTTCTTTGCCGAGCCGCCTCTCTTCGCCATTCGAAGTACTACCTCTGCCTCGCAATATTCTTTGCACCTCCTTTGAAATTCAATAAAGAAAAAAGAAATAGCACTGAGTCTGTGATTTTGCCGGCCGGCCCCGGGGGAGTTTACTCGACCCATTCTCCAGTCTCCCGCACAGAAAAAGTCAGTGTGCGACTCCGTATGAGGACCTCTTTCCCTTCTGCCCACTCTCCGTTCATACGGTTCTCAAAGCAGAGGAGGAAGGGTGGGCTGCAGGTACCACGAGCCCTCTGTCCCACACATCTATCCAGAAGCAAGTGTAGTTCACCGGTTCCACCGAATGCTCCTATCTCTCGGCAAAGATCGTGTGAGTGTGCAGTTATGCTTCGGATGCTTCGCCATAGAATAGATCAACCCAGTTCCCCTTCTTTTCCGGTGCACTCGCTTTATATCTCCGACACACAAGGAAGGACGCGTGGGAAGAAAGCAGCCCTAGCCTCTGTCCGACCGATCATTCCGCTGGCATCTTGCATTCACGCCTCCGTTTGA
mRNA sequence
ATGGAACTTGAATCCTCGATCATTCATGCAATTCCTTCTTTAGGCTTTCTCTTTCCGACTACTTCTAAAAGAAGGCACCCAATAAAGAAGAAAAAGCCCTTCGTTTCGCCAACAAAGAAGTCAGAATCTTTCCCATTCCTTCTTTGCCGAGCCGCCTCTCTTCGCCATTCGAAGTACTACCTCTGCCTCGCAATATTCTTTGCACCTCCTTTGAAATTCAATAAAGAAAAAAGAAATAGCACTGAGTCTGTGATTTTGCCGGCCGGCCCCGGGGGAGTTTACTCGACCCATTCTCCAGTCTCCCGCACAGAAAAAGTCAGTGTGCGACTCCGTATGAGGACCTCTTTCCCTTCTGCCCACTCTCCGTTCATACGGTTCTCAAAGCAGAGGAGGAAGGGTGGGCTGCAGGTACCACGAGCCCTCTGTCCCACACATCTATCCAGAAGCAAGTGTAGTTCACCGGTTCCACCGAATGCTCCTATCTCTCGGCAAAGATCGTGTGAGTGTGCAGTTATGCTTCGGATGCTTCGCCATAGAATAGATCAACCCAGTTCCCCTTCTTTTCCGGTGCACTCGCTTTATATCTCCGACACACAAGGAAGGACGCGTGGGAAGAAAGCAGCCCTAGCCTCTGTCCGACCGATCATTCCGCTGGCATCTTGCATTCACGCCTCCGTTTGA
Coding sequence (CDS)
ATGGAACTTGAATCCTCGATCATTCATGCAATTCCTTCTTTAGGCTTTCTCTTTCCGACTACTTCTAAAAGAAGGCACCCAATAAAGAAGAAAAAGCCCTTCGTTTCGCCAACAAAGAAGTCAGAATCTTTCCCATTCCTTCTTTGCCGAGCCGCCTCTCTTCGCCATTCGAAGTACTACCTCTGCCTCGCAATATTCTTTGCACCTCCTTTGAAATTCAATAAAGAAAAAAGAAATAGCACTGAGTCTGTGATTTTGCCGGCCGGCCCCGGGGGAGTTTACTCGACCCATTCTCCAGTCTCCCGCACAGAAAAAGTCAGTGTGCGACTCCGTATGAGGACCTCTTTCCCTTCTGCCCACTCTCCGTTCATACGGTTCTCAAAGCAGAGGAGGAAGGGTGGGCTGCAGGTACCACGAGCCCTCTGTCCCACACATCTATCCAGAAGCAAGTGTAGTTCACCGGTTCCACCGAATGCTCCTATCTCTCGGCAAAGATCGTGTGAGTGTGCAGTTATGCTTCGGATGCTTCGCCATAGAATAGATCAACCCAGTTCCCCTTCTTTTCCGGTGCACTCGCTTTATATCTCCGACACACAAGGAAGGACGCGTGGGAAGAAAGCAGCCCTAGCCTCTGTCCGACCGATCATTCCGCTGGCATCTTGCATTCACGCCTCCGTTTGA
Protein sequence
MELESSIIHAIPSLGFLFPTTSKRRHPIKKKKPFVSPTKKSESFPFLLCRAASLRHSKYYLCLAIFFAPPLKFNKEKRNSTESVILPAGPGGVYSTHSPVSRTEKVSVRLRMRTSFPSAHSPFIRFSKQRRKGGLQVPRALCPTHLSRSKCSSPVPPNAPISRQRSCECAVMLRMLRHRIDQPSSPSFPVHSLYISDTQGRTRGKKAALASVRPIIPLASCIHASV*
Homology
BLAST of CsaV3_6G024000 vs. NCBI nr
Match:
KAE8647104.1 (hypothetical protein Csa_021729 [Cucumis sativus])
HSP 1 Score: 453.8 bits (1166), Expect = 9.0e-124
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0
Query: 1 MELESSIIHAIPSLGFLFPTTSKRRHPIKKKKPFVSPTKKSESFPFLLCRAASLRHSKYY 60
MELESSIIHAIPSLGFLFPTTSKRRHPIKKKKPFVSPTKKSESFPFLLCRAASLRHSKYY
Sbjct: 1 MELESSIIHAIPSLGFLFPTTSKRRHPIKKKKPFVSPTKKSESFPFLLCRAASLRHSKYY 60
Query: 61 LCLAIFFAPPLKFNKEKRNSTESVILPAGPGGVYSTHSPVSRTEKVSVRLRMRTSFPSAH 120
LCLAIFFAPPLKFNKEKRNSTESVILPAGPGGVYSTHSPVSRTEKVSVRLRMRTSFPSAH
Sbjct: 61 LCLAIFFAPPLKFNKEKRNSTESVILPAGPGGVYSTHSPVSRTEKVSVRLRMRTSFPSAH 120
Query: 121 SPFIRFSKQRRKGGLQVPRALCPTHLSRSKCSSPVPPNAPISRQRSCECAVMLRMLRHRI 180
SPFIRFSKQRRKGGLQVPRALCPTHLSRSKCSSPVPPNAPISRQRSCECAVMLRMLRHRI
Sbjct: 121 SPFIRFSKQRRKGGLQVPRALCPTHLSRSKCSSPVPPNAPISRQRSCECAVMLRMLRHRI 180
Query: 181 DQPSSPSFPVHSLYISDTQGRTRGKKAALASVRPIIPLASCIHASV 227
DQPSSPSFPVHSLYISDTQGRTRGKKAALASVRPIIPLASCIHASV
Sbjct: 181 DQPSSPSFPVHSLYISDTQGRTRGKKAALASVRPIIPLASCIHASV 226
BLAST of CsaV3_6G024000 vs. NCBI nr
Match:
XP_007134774.1 (hypothetical protein PHAVU_010G074800g [Phaseolus vulgaris] >ESW06768.1 hypothetical protein PHAVU_010G074800g [Phaseolus vulgaris])
HSP 1 Score: 228.8 bits (582), Expect = 4.7e-56
Identity = 117/127 (92.13%), Postives = 120/127 (94.49%), Query Frame = 0
Query: 100 VSRTEKVSVRLRMRTSFPSAHSPFIRFSKQRRKGGLQVPRALCPTHLSRSKCSSPVPPNA 159
V RT +VSVRLRMRTSFPSAHSPF RFSKQRRKGG QVPRALCPTHLSRSKCSSPVPPNA
Sbjct: 8 VFRTAQVSVRLRMRTSFPSAHSPFTRFSKQRRKGGQQVPRALCPTHLSRSKCSSPVPPNA 67
Query: 160 PISRQRSCECAVMLRMLRHRIDQPSSPSFPVHSLYISDTQGRTRGKKAALASVRPIIPLA 219
PISRQRSCECAVMLRMLRHRID+PSS SFPVHSLYISDTQGRTR +AALASVRPIIPLA
Sbjct: 68 PISRQRSCECAVMLRMLRHRIDRPSSRSFPVHSLYISDTQGRTRW-EAALASVRPIIPLA 127
Query: 220 SCIHASV 227
SCIHASV
Sbjct: 128 SCIHASV 133
BLAST of CsaV3_6G024000 vs. NCBI nr
Match:
YP_010047116.1 (hypothetical protein J6727_mgp35 [Pyrus betulifolia] >QPJ79552.1 hypothetical protein [Pyrus betulifolia])
HSP 1 Score: 220.7 bits (561), Expect = 1.3e-53
Identity = 112/136 (82.35%), Postives = 120/136 (88.24%), Query Frame = 0
Query: 89 GPGGVYSTHSPVSRTEKVSVRLRMRTSFPSAHSPFIRFSKQRRKGGLQVPRALCPTHLSR 148
GPGGV STHSPVSRT +VSVRLRMRTSFPSAHSPF RFSKQRRKGG QVPRALCPTHLSR
Sbjct: 5 GPGGVCSTHSPVSRTAQVSVRLRMRTSFPSAHSPFTRFSKQRRKGGQQVPRALCPTHLSR 64
Query: 149 SKCSSPVPPNAPISRQRSCECAVMLRMLRHRIDQPSSPSFPVHSLYISDTQGRTRGKKAA 208
SKCSSPVPPNAPISRQRSCECAVMLRMLRHRID+PSS SFPVHSLYISDTQGRTR + ++
Sbjct: 65 SKCSSPVPPNAPISRQRSCECAVMLRMLRHRIDRPSSRSFPVHSLYISDTQGRTRWEGSS 124
Query: 209 LASVRPIIPLASCIHA 225
S+ P A +H+
Sbjct: 125 -PSLCPADHSAGILHS 139
BLAST of CsaV3_6G024000 vs. NCBI nr
Match:
GFS28446.1 (hypothetical protein Acr_00g0001900 [Actinidia rufa] >GFS28601.1 hypothetical protein Acr_00g0002740 [Actinidia rufa] >GFS28775.1 hypothetical protein Acr_00g0003860 [Actinidia rufa])
HSP 1 Score: 220.3 bits (560), Expect = 1.7e-53
Identity = 112/126 (88.89%), Postives = 115/126 (91.27%), Query Frame = 0
Query: 78 RNSTESVILPAGPGGVYSTHSPVSRTEKVSVRLRMRTSFPSAHSPFIRFSKQRRKGGLQV 137
R SVI PA PGGVYSTHSPVSRT +VSVRLRMRTSFPSAHSPF RFSKQRRKGG QV
Sbjct: 94 RCKASSVIYPA-PGGVYSTHSPVSRTAQVSVRLRMRTSFPSAHSPFTRFSKQRRKGGHQV 153
Query: 138 PRALCPTHLSRSKCSSPVPPNAPISRQRSCECAVMLRMLRHRIDQPSSPSFPVHSLYISD 197
PRALCPTHLSRSKCSSPVPPNAPISRQRS ECAVML+MLRHRID+PSS SFPVHSLYISD
Sbjct: 154 PRALCPTHLSRSKCSSPVPPNAPISRQRSYECAVMLQMLRHRIDRPSSRSFPVHSLYISD 213
Query: 198 TQGRTR 204
TQGRTR
Sbjct: 214 TQGRTR 218
BLAST of CsaV3_6G024000 vs. NCBI nr
Match:
KAC9255307.1 (hypothetical protein E3N88_46106 [Mikania micrantha] >KAC9255313.1 hypothetical protein E3N88_46112 [Mikania micrantha] >KAD0468657.1 hypothetical protein E3N88_44231 [Mikania micrantha])
HSP 1 Score: 217.6 bits (553), Expect = 1.1e-52
Identity = 106/116 (91.38%), Postives = 110/116 (94.83%), Query Frame = 0
Query: 88 AGPGGVYSTHSPVSRTEKVSVRLRMRTSFPSAHSPFIRFSKQRRKGGLQVPRALCPTHLS 147
+GP G+YSTHSPVSRT +VSVRLRMRTSFPSAHSPF RFSKQRRKGG QVPRALCPTHLS
Sbjct: 63 SGPRGLYSTHSPVSRTAQVSVRLRMRTSFPSAHSPFTRFSKQRRKGGQQVPRALCPTHLS 122
Query: 148 RSKCSSPVPPNAPISRQRSCECAVMLRMLRHRIDQPSSPSFPVHSLYISDTQGRTR 204
RSKCSSPVPPNAPI RQRSCECAVMLRMLRHRID+PSS SFPVHSLYISDTQGRTR
Sbjct: 123 RSKCSSPVPPNAPICRQRSCECAVMLRMLRHRIDRPSSRSFPVHSLYISDTQGRTR 178
BLAST of CsaV3_6G024000 vs. ExPASy TrEMBL
Match:
V7AQ89 (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_010G074800g PE=4 SV=1)
HSP 1 Score: 228.8 bits (582), Expect = 2.3e-56
Identity = 117/127 (92.13%), Postives = 120/127 (94.49%), Query Frame = 0
Query: 100 VSRTEKVSVRLRMRTSFPSAHSPFIRFSKQRRKGGLQVPRALCPTHLSRSKCSSPVPPNA 159
V RT +VSVRLRMRTSFPSAHSPF RFSKQRRKGG QVPRALCPTHLSRSKCSSPVPPNA
Sbjct: 8 VFRTAQVSVRLRMRTSFPSAHSPFTRFSKQRRKGGQQVPRALCPTHLSRSKCSSPVPPNA 67
Query: 160 PISRQRSCECAVMLRMLRHRIDQPSSPSFPVHSLYISDTQGRTRGKKAALASVRPIIPLA 219
PISRQRSCECAVMLRMLRHRID+PSS SFPVHSLYISDTQGRTR +AALASVRPIIPLA
Sbjct: 68 PISRQRSCECAVMLRMLRHRIDRPSSRSFPVHSLYISDTQGRTRW-EAALASVRPIIPLA 127
Query: 220 SCIHASV 227
SCIHASV
Sbjct: 128 SCIHASV 133
BLAST of CsaV3_6G024000 vs. ExPASy TrEMBL
Match:
A0A7T0CRU8 (Uncharacterized protein OS=Pyrus betulifolia OX=436086 GN=ORF211 PE=4 SV=1)
HSP 1 Score: 220.7 bits (561), Expect = 6.2e-54
Identity = 112/136 (82.35%), Postives = 120/136 (88.24%), Query Frame = 0
Query: 89 GPGGVYSTHSPVSRTEKVSVRLRMRTSFPSAHSPFIRFSKQRRKGGLQVPRALCPTHLSR 148
GPGGV STHSPVSRT +VSVRLRMRTSFPSAHSPF RFSKQRRKGG QVPRALCPTHLSR
Sbjct: 5 GPGGVCSTHSPVSRTAQVSVRLRMRTSFPSAHSPFTRFSKQRRKGGQQVPRALCPTHLSR 64
Query: 149 SKCSSPVPPNAPISRQRSCECAVMLRMLRHRIDQPSSPSFPVHSLYISDTQGRTRGKKAA 208
SKCSSPVPPNAPISRQRSCECAVMLRMLRHRID+PSS SFPVHSLYISDTQGRTR + ++
Sbjct: 65 SKCSSPVPPNAPISRQRSCECAVMLRMLRHRIDRPSSRSFPVHSLYISDTQGRTRWEGSS 124
Query: 209 LASVRPIIPLASCIHA 225
S+ P A +H+
Sbjct: 125 -PSLCPADHSAGILHS 139
BLAST of CsaV3_6G024000 vs. ExPASy TrEMBL
Match:
A0A7J0D786 (Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_00g0001900 PE=4 SV=1)
HSP 1 Score: 220.3 bits (560), Expect = 8.1e-54
Identity = 112/126 (88.89%), Postives = 115/126 (91.27%), Query Frame = 0
Query: 78 RNSTESVILPAGPGGVYSTHSPVSRTEKVSVRLRMRTSFPSAHSPFIRFSKQRRKGGLQV 137
R SVI PA PGGVYSTHSPVSRT +VSVRLRMRTSFPSAHSPF RFSKQRRKGG QV
Sbjct: 94 RCKASSVIYPA-PGGVYSTHSPVSRTAQVSVRLRMRTSFPSAHSPFTRFSKQRRKGGHQV 153
Query: 138 PRALCPTHLSRSKCSSPVPPNAPISRQRSCECAVMLRMLRHRIDQPSSPSFPVHSLYISD 197
PRALCPTHLSRSKCSSPVPPNAPISRQRS ECAVML+MLRHRID+PSS SFPVHSLYISD
Sbjct: 154 PRALCPTHLSRSKCSSPVPPNAPISRQRSYECAVMLQMLRHRIDRPSSRSFPVHSLYISD 213
Query: 198 TQGRTR 204
TQGRTR
Sbjct: 214 TQGRTR 218
BLAST of CsaV3_6G024000 vs. ExPASy TrEMBL
Match:
A0A5N6L760 (Uncharacterized protein OS=Mikania micrantha OX=192012 GN=E3N88_44231 PE=4 SV=1)
HSP 1 Score: 217.6 bits (553), Expect = 5.3e-53
Identity = 106/116 (91.38%), Postives = 110/116 (94.83%), Query Frame = 0
Query: 88 AGPGGVYSTHSPVSRTEKVSVRLRMRTSFPSAHSPFIRFSKQRRKGGLQVPRALCPTHLS 147
+GP G+YSTHSPVSRT +VSVRLRMRTSFPSAHSPF RFSKQRRKGG QVPRALCPTHLS
Sbjct: 63 SGPRGLYSTHSPVSRTAQVSVRLRMRTSFPSAHSPFTRFSKQRRKGGQQVPRALCPTHLS 122
Query: 148 RSKCSSPVPPNAPISRQRSCECAVMLRMLRHRIDQPSSPSFPVHSLYISDTQGRTR 204
RSKCSSPVPPNAPI RQRSCECAVMLRMLRHRID+PSS SFPVHSLYISDTQGRTR
Sbjct: 123 RSKCSSPVPPNAPICRQRSCECAVMLRMLRHRIDRPSSRSFPVHSLYISDTQGRTR 178
BLAST of CsaV3_6G024000 vs. ExPASy TrEMBL
Match:
A0A445GXA1 (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_041803 PE=4 SV=1)
HSP 1 Score: 217.2 bits (552), Expect = 6.9e-53
Identity = 112/139 (80.58%), Postives = 121/139 (87.05%), Query Frame = 0
Query: 88 AGPG--GVYSTHSPVSRTEKVSVRLRMRTSFPSAHSPFIRFSKQRRKGGLQVPRALCPTH 147
+GPG GVYSTHSPV RT +VSVRLRMRTSFPSAHSPF RFSKQRRKGG QVPRALCPTH
Sbjct: 11 SGPGGRGVYSTHSPVFRTAQVSVRLRMRTSFPSAHSPFTRFSKQRRKGGQQVPRALCPTH 70
Query: 148 LSRSKCSSPVPPNAPISRQRSCECAVMLRMLRHRIDQPSSPSFPVHSLYISDTQGRTRGK 207
LSRSKCSSPVPPNAPISRQRSCECAVMLRMLRHRID+PSS SFPVHSLYISDTQGRTR +
Sbjct: 71 LSRSKCSSPVPPNAPISRQRSCECAVMLRMLRHRIDRPSSRSFPVHSLYISDTQGRTRWE 130
Query: 208 KAALASVRPIIPLASCIHA 225
++ S+ P A +H+
Sbjct: 131 GSS-PSLCPADHSAGILHS 148
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAE8647104.1 | 9.0e-124 | 100.00 | hypothetical protein Csa_021729 [Cucumis sativus] | [more] |
| XP_007134774.1 | 4.7e-56 | 92.13 | hypothetical protein PHAVU_010G074800g [Phaseolus vulgaris] >ESW06768.1 hypothet... | [more] |
| YP_010047116.1 | 1.3e-53 | 82.35 | hypothetical protein J6727_mgp35 [Pyrus betulifolia] >QPJ79552.1 hypothetical pr... | [more] |
| GFS28446.1 | 1.7e-53 | 88.89 | hypothetical protein Acr_00g0001900 [Actinidia rufa] >GFS28601.1 hypothetical pr... | [more] |
| KAC9255307.1 | 1.1e-52 | 91.38 | hypothetical protein E3N88_46106 [Mikania micrantha] >KAC9255313.1 hypothetical ... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| V7AQ89 | 2.3e-56 | 92.13 | Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_010G074800g PE=4 ... | [more] |
| A0A7T0CRU8 | 6.2e-54 | 82.35 | Uncharacterized protein OS=Pyrus betulifolia OX=436086 GN=ORF211 PE=4 SV=1 | [more] |
| A0A7J0D786 | 8.1e-54 | 88.89 | Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_00g0001900 PE=4 SV=1 | [more] |
| A0A5N6L760 | 5.3e-53 | 91.38 | Uncharacterized protein OS=Mikania micrantha OX=192012 GN=E3N88_44231 PE=4 SV=1 | [more] |
| A0A445GXA1 | 6.9e-53 | 80.58 | Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_041803 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
