Sequences
The following sequences are available for this feature:
Legend: exon CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGCATCCTTCTCTCCGAGCTCACTGTCGATAGCCGCCACCGCCGCCCCAAGCTACGGGATTCCTTACCCTCCTCCACTGCCACGCCCACTCTTGTTCCATAACGACCACAGCTCTCTTCCACCGTCGCCAGCGGCGGAGGAGTATCCGGCGAAATCCCCCCGGCGTGTAAATGGTGAACGTAAAGATAAGTGCAGTGAAGCTCCAAGAAATGGAAATAAAGATGCAAAGCCAAATAAGGATCCTTGGCCGAAGTGCCCCGTCCCCAAATCGCCACCTCCTCCATTCTAA
GCATCCTTCTCTCCGAGCTCACTGTCGATAGCCGCCACCGCCGCCCCAAGCTACGGGATTCCTTACCCTCCTCCACTGCCACGCCCACTCTTGTTCCATAACGACCACAGCTCTCTTCCACCGTCGCCAGCGGCGGAGGAGTATCCGGCGAAATCCCCCCGGCGTGTAAATGGTGAACGTAAAGATAAGTGCAGTGAAGCTCCAAGAAATGGAAATAAAGATGCAAAGCCAAATAAGGATCCTTGGCCGAAGTGCCCCGTCCCCAAATCGCCACCTCCTCCATTCTAA
GCATCCTTCTCTCCGAGCTCACTGTCGATAGCCGCCACCGCCGCCCCAAGCTACGGGATTCCTTACCCTCCTCCACTGCCACGCCCACTCTTGTTCCATAACGACCACAGCTCTCTTCCACCGTCGCCAGCGGCGGAGGAGTATCCGGCGAAATCCCCCCGGCGTGTAAATGGTGAACGTAAAGATAAGTGCAGTGAAGCTCCAAGAAATGGAAATAAAGATGCAAAGCCAAATAAGGATCCTTGGCCGAAGTGCCCCGTCCCCAAATCGCCACCTCCTCCATTCTAA
ASFSPSSLSIAATAAPSYGIPYPPPLPRPLLFHNDHSSLPPSPAAEEYPAKSPRRVNGERKDKCSEAPRNGNKDAKPNKDPWPKCPVPKSPPPPF*
Homology
BLAST of CsaV3_6G005390 vs. NCBI nr
Match:
KAE8646677.1 (hypothetical protein Csa_023590, partial [Cucumis sativus])
HSP 1 Score: 191.4 bits (485), Expect = 3.5e-45
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0
BLAST of CsaV3_6G005390 vs. NCBI nr
Match:
KAA0054906.1 (hypothetical protein E6C27_scaffold43052G00340 [Cucumis melo var. makuwa] >TYK22694.1 hypothetical protein E5676_scaffold1163G00110 [Cucumis melo var. makuwa])
HSP 1 Score: 162.5 bits (410), Expect = 1.8e-36
Identity = 82/94 (87.23%), Postives = 87/94 (92.55%), Query Frame = 0
BLAST of CsaV3_6G005390 vs. ExPASy TrEMBL
Match:
A0A0A0KEF9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G058700 PE=4 SV=1)
HSP 1 Score: 191.4 bits (485), Expect = 1.7e-45
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0
BLAST of CsaV3_6G005390 vs. ExPASy TrEMBL
Match:
A0A5D3DGG9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00110 PE=4 SV=1)
HSP 1 Score: 162.5 bits (410), Expect = 8.5e-37
Identity = 82/94 (87.23%), Postives = 87/94 (92.55%), Query Frame = 0
The following BLAST results are available for this feature:
Match Name E-value Identity Description
KAE8646677.1 3.5e-45 100.00 hypothetical protein Csa_023590, partial [Cucumis sativus] [more] KAA0054906.1 1.8e-36 87.23 hypothetical protein E6C27_scaffold43052G00340 [Cucumis melo var. makuwa] >TYK22... [more]
Match Name E-value Identity Description
Match Name E-value Identity Description
A0A0A0KEF9 1.7e-45 100.00 Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G058700 PE=4 SV=1 [more] A0A5D3DGG9 8.5e-37 87.23 Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match Name E-value Identity Description
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
G C A T C C T T C T C T C C G A G C T C A C T G T C G A T A G C C G C C A C C G C C G C C C C A A G C T A C G G G A T T C C T T A C C C T C C T C C A C T G C C A C G C C C A C T C T T G T T C C A T A A C G A C C A C A G C T C T C T T C C A C C G T C G C C A G C G G C G G A G G A G T A T C C G G C G A A A T C C C C C C G G C G T G T A A A T G G T G A A C G T A A A G A T A A G T G C A G T G A A G C T C C A A G A A A T G G A A A T A A A G A T G C A A A G C C A A A T A A G G A T C C T T G G C C G A A G T G C C C C G T C C C C A A A T C G C C A C C T C C T C C A T T C T A A 50 100 150 200 250 Score = Score = Score = Sequence mobidb-lite mobidb-lite mobidb-lite
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 52..80 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 14..95 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 81..95
Relationships
The following mRNA feature(s) are a part of this gene:
