CsaV3_5G014340 (gene) Cucumber (Chinese Long) v3
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Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTCAGGAATCTGTGGAAGAACTTCAACCAGAATTCGAGCAATTACAACTGGAATTTGATGACGTGTTTAATATGTCGGCGAAGCTTCCCCCCATGAGACAGGTCGACCATCGAATCCAATTGAAAGAGGATACAGACCCCATCAACGTGAGATCGTACCGCTACCCACACGCTTAGATGGTTCAGGAATCTGTGGAAGAACTTCAACCAGAATTCGAGCAATTACAACTGGAATTTGATGACGTGTTTAATATGTCGGCGAAGCTTCCCCCCATGAGACAGGTCGACCATCGAATCCAATTGAAAGAGGATACAGACCCCATCAACGTGAGATCGTACCGCTACCCACACGCTTAG ATGGTTCAGGAATCTGTGGAAGAACTTCAACCAGAATTCGAGCAATTACAACTGGAATTTGATGACGTGTTTAATATGTCGGCGAAGCTTCCCCCCATGAGACAGGTCGACCATCGAATCCAATTGAAAGAGGATACAGACCCCATCAACGTGAGATCGTACCGCTACCCACACGCTTAG MVQESVEELQPEFEQLQLEFDDVFNMSAKLPPMRQVDHRIQLKEDTDPINVRSYRYPHA* Homology
BLAST of CsaV3_5G014340 vs. NCBI nr
Match: KAE8648175.1 (hypothetical protein Csa_018448 [Cucumis sativus]) HSP 1 Score: 121.7 bits (304), Expect = 2.1e-24 Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0
BLAST of CsaV3_5G014340 vs. NCBI nr
Match: TYK05775.1 (putative retroelement pol polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 102.4 bits (254), Expect = 1.3e-18 Identity = 47/59 (79.66%), Postives = 55/59 (93.22%), Query Frame = 0
BLAST of CsaV3_5G014340 vs. NCBI nr
Match: KAA0062470.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK27412.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 96.7 bits (239), Expect = 7.4e-17 Identity = 44/59 (74.58%), Postives = 51/59 (86.44%), Query Frame = 0
BLAST of CsaV3_5G014340 vs. NCBI nr
Match: KAA0057859.1 (pleiotropic drug resistance protein 1-like [Cucumis melo var. makuwa]) HSP 1 Score: 95.1 bits (235), Expect = 2.2e-16 Identity = 44/59 (74.58%), Postives = 50/59 (84.75%), Query Frame = 0
BLAST of CsaV3_5G014340 vs. NCBI nr
Match: TYJ98541.1 (pleiotropic drug resistance protein 1-like [Cucumis melo var. makuwa]) HSP 1 Score: 95.1 bits (235), Expect = 2.2e-16 Identity = 44/59 (74.58%), Postives = 50/59 (84.75%), Query Frame = 0
BLAST of CsaV3_5G014340 vs. ExPASy TrEMBL
Match: A0A5D3C316 (Putative retroelement pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G002710 PE=4 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 6.5e-19 Identity = 47/59 (79.66%), Postives = 55/59 (93.22%), Query Frame = 0
BLAST of CsaV3_5G014340 vs. ExPASy TrEMBL
Match: A0A5A7V5G0 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold325G001010 PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 3.6e-17 Identity = 44/59 (74.58%), Postives = 51/59 (86.44%), Query Frame = 0
BLAST of CsaV3_5G014340 vs. ExPASy TrEMBL
Match: A0A5A7UWA7 (Pleiotropic drug resistance protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G001530 PE=4 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 1.0e-16 Identity = 44/59 (74.58%), Postives = 50/59 (84.75%), Query Frame = 0
BLAST of CsaV3_5G014340 vs. ExPASy TrEMBL
Match: A0A5D3BIM8 (Pleiotropic drug resistance protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G001530 PE=4 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 1.0e-16 Identity = 44/59 (74.58%), Postives = 50/59 (84.75%), Query Frame = 0
BLAST of CsaV3_5G014340 vs. ExPASy TrEMBL
Match: A0A5D3CD46 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G00290 PE=4 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 3.0e-16 Identity = 43/59 (72.88%), Postives = 54/59 (91.53%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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