CsaV3_4G009700 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATCAAAAAGCAAAAAATGATGGGGAGATTAGTGAAGCTAGGAGGATCGAAGCACAAGGAGGAGCAATTGTTCGTTTAACTCAAGTAATTAATGACTTGACAGATCGATTAGATAGGATGAATGTAGCATTAAGGAATCGTCACCAAGGGGAAGTCTTGAATGAAGGAGTTGAAAATGAAAAGGATGAAGATAATGAAACTCTTTTAGCCAGACAAAATCCAACAGAGAGGAGAGTTTAG ATGAATCAAAAAGCAAAAAATGATGGGGAGATTAGTGAAGCTAGGAGGATCGAAGCACAAGGAGGAGCAATTGTTCGTTTAACTCAAGTAATTAATGACTTGACAGATCGATTAGATAGGATGAATGTAGCATTAAGGAATCGTCACCAAGGGGAAGTCTTGAATGAAGGAGTTGAAAATGAAAAGGATGAAGATAATGAAACTCTTTTAGCCAGACAAAATCCAACAGAGAGGAGAGTTTAG ATGAATCAAAAAGCAAAAAATGATGGGGAGATTAGTGAAGCTAGGAGGATCGAAGCACAAGGAGGAGCAATTGTTCGTTTAACTCAAGTAATTAATGACTTGACAGATCGATTAGATAGGATGAATGTAGCATTAAGGAATCGTCACCAAGGGGAAGTCTTGAATGAAGGAGTTGAAAATGAAAAGGATGAAGATAATGAAACTCTTTTAGCCAGACAAAATCCAACAGAGAGGAGAGTTTAG MNQKAKNDGEISEARRIEAQGGAIVRLTQVINDLTDRLDRMNVALRNRHQGEVLNEGVENEKDEDNETLLARQNPTERRV* Homology
BLAST of CsaV3_4G009700 vs. NCBI nr
Match: KGN53741.1 (hypothetical protein Csa_015371 [Cucumis sativus]) HSP 1 Score: 154.8 bits (390), Expect = 3.1e-34 Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0
BLAST of CsaV3_4G009700 vs. NCBI nr
Match: KGN47250.1 (hypothetical protein Csa_016986 [Cucumis sativus]) HSP 1 Score: 133.7 bits (335), Expect = 7.4e-28 Identity = 69/80 (86.25%), Postives = 74/80 (92.50%), Query Frame = 0
BLAST of CsaV3_4G009700 vs. NCBI nr
Match: KAE8646857.1 (hypothetical protein Csa_020829, partial [Cucumis sativus]) HSP 1 Score: 132.5 bits (332), Expect = 1.6e-27 Identity = 70/80 (87.50%), Postives = 73/80 (91.25%), Query Frame = 0
BLAST of CsaV3_4G009700 vs. NCBI nr
Match: XP_023534142.1 (uncharacterized protein LOC111795765 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 73.9 bits (180), Expect = 6.9e-10 Identity = 46/76 (60.53%), Postives = 54/76 (71.05%), Query Frame = 0
BLAST of CsaV3_4G009700 vs. NCBI nr
Match: XP_022925325.1 (uncharacterized protein LOC111432615 [Cucurbita moschata]) HSP 1 Score: 73.6 bits (179), Expect = 9.1e-10 Identity = 46/76 (60.53%), Postives = 54/76 (71.05%), Query Frame = 0
BLAST of CsaV3_4G009700 vs. ExPASy TrEMBL
Match: A0A0A0L0S3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G114220 PE=4 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 1.5e-34 Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0
BLAST of CsaV3_4G009700 vs. ExPASy TrEMBL
Match: A0A0A0KC00 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G235580 PE=4 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 3.6e-28 Identity = 69/80 (86.25%), Postives = 74/80 (92.50%), Query Frame = 0
BLAST of CsaV3_4G009700 vs. ExPASy TrEMBL
Match: A0A6J1EHL9 (uncharacterized protein LOC111432615 OS=Cucurbita moschata OX=3662 GN=LOC111432615 PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 4.4e-10 Identity = 46/76 (60.53%), Postives = 54/76 (71.05%), Query Frame = 0
BLAST of CsaV3_4G009700 vs. ExPASy TrEMBL
Match: A0A6J1ETN1 (uncharacterized protein LOC111436410 OS=Cucurbita moschata OX=3662 GN=LOC111436410 PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 2.4e-08 Identity = 44/76 (57.89%), Postives = 52/76 (68.42%), Query Frame = 0
BLAST of CsaV3_4G009700 vs. ExPASy TrEMBL
Match: A0A5A7UDQ9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold27G00150 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 5.9e-07 Identity = 31/40 (77.50%), Postives = 34/40 (85.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|