CsaV3_4G008630 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGGATGAAAAGAAACATACCAATTTTAGTTGGAGAGGTCACGAAAAAAACGTGAAATAGCGACAAAATGGTCAATTGAATTACAAAGGTGAAGCCTCTAGTTATCACCAAAGACAATATCCCAAAAGACCACATCAACCACCTCAACGCCATGGCCACTACAACATTCCTAACCAAGCTTCTTCATCTTGTTCATTATCATCATCATTGGAAGCCCTTGTGCGCAAATATATGTGGAGGAATTATGCCTTTCTACAAAGCCAAGTCACATCTATTAAAAATCTAGAATTACAAATGGGGCAAATAACTAGTGACATCTCTGGGTGA CGACAAAATGGTCAATTGAATTACAAAGGTGAAGCCTCTAGTTATCACCAAAGACAATATCCCAAAAGACCACATCAACCACCTCAACGCCATGGCCACTACAACATTCCTAACCAAGCTTCTTCATCTTGTTCATTATCATCATCATTGGAAGCCCTTGTGCGCAAATATATGTGGAGGAATTATGCCTTTCTACAAAGCCAAGTCACATCTATTAAAAATCTAGAATTACAAATGGGGCAAATAACTAGTGACATCTCTGGGTGA CGACAAAATGGTCAATTGAATTACAAAGGTGAAGCCTCTAGTTATCACCAAAGACAATATCCCAAAAGACCACATCAACCACCTCAACGCCATGGCCACTACAACATTCCTAACCAAGCTTCTTCATCTTGTTCATTATCATCATCATTGGAAGCCCTTGTGCGCAAATATATGTGGAGGAATTATGCCTTTCTACAAAGCCAAGTCACATCTATTAAAAATCTAGAATTACAAATGGGGCAAATAACTAGTGACATCTCTGGGTGA RQNGQLNYKGEASSYHQRQYPKRPHQPPQRHGHYNIPNQASSSCSLSSSLEALVRKYMWRNYAFLQSQVTSIKNLELQMGQITSDISG* Homology
BLAST of CsaV3_4G008630 vs. NCBI nr
Match: KAE8649272.1 (hypothetical protein Csa_023796, partial [Cucumis sativus]) HSP 1 Score: 177.9 bits (450), Expect = 3.7e-41 Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0
BLAST of CsaV3_4G008630 vs. NCBI nr
Match: TYK27798.1 (hypothetical protein E5676_scaffold749G00200 [Cucumis melo var. makuwa]) HSP 1 Score: 75.9 bits (185), Expect = 2.0e-10 Identity = 47/86 (54.65%), Postives = 54/86 (62.79%), Query Frame = 0
BLAST of CsaV3_4G008630 vs. NCBI nr
Match: KAA0040852.1 (hypothetical protein E6C27_scaffold333G00770 [Cucumis melo var. makuwa] >TYK17828.1 hypothetical protein E5676_scaffold306G00800 [Cucumis melo var. makuwa]) HSP 1 Score: 63.5 bits (153), Expect = 1.0e-06 Identity = 40/83 (48.19%), Postives = 52/83 (62.65%), Query Frame = 0
BLAST of CsaV3_4G008630 vs. NCBI nr
Match: XP_038882405.1 (uncharacterized protein LOC120073674 [Benincasa hispida]) HSP 1 Score: 55.1 bits (131), Expect = 3.7e-04 Identity = 33/79 (41.77%), Postives = 52/79 (65.82%), Query Frame = 0
BLAST of CsaV3_4G008630 vs. NCBI nr
Match: XP_038889363.1 (uncharacterized protein LOC120079279 [Benincasa hispida]) HSP 1 Score: 55.1 bits (131), Expect = 3.7e-04 Identity = 31/85 (36.47%), Postives = 58/85 (68.24%), Query Frame = 0
BLAST of CsaV3_4G008630 vs. ExPASy TrEMBL
Match: A0A5D3DWD5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold749G00200 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 9.7e-11 Identity = 47/86 (54.65%), Postives = 54/86 (62.79%), Query Frame = 0
BLAST of CsaV3_4G008630 vs. ExPASy TrEMBL
Match: A0A0A0KMN3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G055570 PE=4 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 8.2e-10 Identity = 44/78 (56.41%), Postives = 55/78 (70.51%), Query Frame = 0
BLAST of CsaV3_4G008630 vs. ExPASy TrEMBL
Match: A0A5D3D2S0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G00800 PE=4 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 5.0e-07 Identity = 40/83 (48.19%), Postives = 52/83 (62.65%), Query Frame = 0
BLAST of CsaV3_4G008630 vs. ExPASy TrEMBL
Match: A0A0A0KN83 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G403040 PE=4 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 2.3e-04 Identity = 25/42 (59.52%), Postives = 34/42 (80.95%), Query Frame = 0
BLAST of CsaV3_4G008630 vs. ExPASy TrEMBL
Match: A0A5A7U1G5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold94G00940 PE=4 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 6.7e-04 Identity = 25/39 (64.10%), Postives = 32/39 (82.05%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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