CsaV3_4G006910 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G006910
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr4: 4694008 .. 4695468 (-)
RNA-Seq ExpressionCsaV3_4G006910
SyntenyCsaV3_4G006910
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGGAGAAAAATCAGAAGCCCAAAGGCTCTCAGCTCGAGGCCAGAGCCGTTGCCCTTAAAGTCATCTGCCCGATTTGCAAGGTTCCTTTTTCTTTGCTTCAATCTTTCTTTCTTTCTTTCTTATAATTGTATTCCATTGGATTTTAGTGTTCTTCCTCTCTTTTAATCTGTATCGTAATCGTACTCCTGTTTTGATGTCATAACAACTGCAACTGCCAACCCCATATTCAATTATCATTTTTCCGTTCTTATGTATAGTGCACTTGATATGGCTGTGCGTTGGTTTCAATTGATATGAAATTCGTTGGAGTTTCATTAGTTTTTTGTCTTCTTTTCTCAAGGCTTGAGTACATAGATTATTTTCACGGATCATTTATTCTAGGGTTTGAAAGAATTCGAAATGGTTTTGTTTACTGGAAATTTTTTAAGCCTTAATTCTAGATGATAGTGAGGTTTGAGTTATACATATAGTACAATCTATTGTGACCAACTACTTGAGATACCGATTAGAAACTATGATACATTATTTTCTGTGTTGCTATGATCTTGTCTTGAGAAATTTTCTTGTTGCAAGAATTGCTGTATGGTTATGTGTTTGTTTGGGCGGATTAGTCAAATTATGCTTGAGTTGAGATTGTTGGGGGAAAAAAATACTCGATAGGATAGACTATAGAGGGAACCTGATGAGGATTTCTCTTTTTGTTTACTCCTTTGGACAACTAAGAAACGGAGAAGTATATGCCACAAGAAAGGGAGACAACAAATTAGAGGATAGGATTGAGGGAACCCTGCCTTAAAAGAGGCGAAAGGAATATTATAAAAAGAGATCCTTCCCATTGTTAATAATCATTAGAAGACTAACAAAAAACGAAAAAGCGAGTGATTAAAACACCAACCAGAGGCCAAACAACTGCAGATGATTAAAAGAAGTATCATAGGAAATAATCTTATTTTCAAAGATTATGCCTTTGGAACCTCGGCCCCTTGGAGCTTCTTCTACCAGCCAATCAATGAGCAAGGTGGCAATGGGGAAAACAAATGATTCACATATGCACCATCTCTAAAAACAAACGACGGGGAATGAGATCCATCTTGAGTGTCCATCTTGGGACGTTGATAATGTTGAGTTTGTCTTTTGTGGGTTAATCTGCTGTGGATTGATTTTTCTCTTGGCTTGTGGGACGAAGTCATAGAGACTCTAAATATTGAATTCAACATAGAAGAGAGTGGAATAATGATAGGAAATTAGATATGAATTTGTTTATCCTTGCTTTTGATACTTGAAAGTATATCTGTTCTTCCCCCACGACCGTGTATTTGATCATCTTTTTTCTTTTATTCTAACCTCAGGTACAACTTGCAAATCAGAACCAGTTGGGTGATCATTATGGCTCCAAACATCCAAAGGAAAAGCCCCCATCAGAATCTGGTTGAATCTTCGCTTGCATTTGAAGTATGA

mRNA sequence

ATGCGGAGAAAAATCAGAAGCCCAAAGGCTCTCAGCTCGAGGCCAGAGCCGTTGCCCTTAAAGTCATCTGCCCGATTTGCAAGGTACAACTTGCAAATCAGAACCAGTTGGGTGATCATTATGGCTCCAAACATCCAAAGGAAAAGCCCCCATCAGAATCTGGTTGAATCTTCGCTTGCATTTGAAGTATGA

Coding sequence (CDS)

ATGCGGAGAAAAATCAGAAGCCCAAAGGCTCTCAGCTCGAGGCCAGAGCCGTTGCCCTTAAAGTCATCTGCCCGATTTGCAAGGTACAACTTGCAAATCAGAACCAGTTGGGTGATCATTATGGCTCCAAACATCCAAAGGAAAAGCCCCCATCAGAATCTGGTTGAATCTTCGCTTGCATTTGAAGTATGA

Protein sequence

MRRKIRSPKALSSRPEPLPLKSSARFARYNLQIRTSWVIIMAPNIQRKSPHQNLVESSLAFEV*
Homology
[Close]
BLAST of CsaV3_4G006910 vs. NCBI nr
Match: KGN53441.1 (hypothetical protein Csa_015219 [Cucumis sativus])

HSP 1 Score: 125.2 bits (313), Expect = 2.1e-25
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0 

Query: 1  MRRKIRSPKALSSRPEPLPLKSSARFARYNLQIRTSWVIIMAPNIQRKSPHQNLVESSLA 60
          MRRKIRSPKALSSRPEPLPLKSSARFARYNLQIRTSWVIIMAPNIQRKSPHQNLVESSLA
Sbjct: 1  MRRKIRSPKALSSRPEPLPLKSSARFARYNLQIRTSWVIIMAPNIQRKSPHQNLVESSLA 60

Query: 61 FEV 64
          FEV
Sbjct: 61 FEV 63

[Close]
BLAST of CsaV3_4G006910 vs. ExPASy TrEMBL
Match: A0A0A0KZY7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G055360 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.0e-25
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0 

Query: 1  MRRKIRSPKALSSRPEPLPLKSSARFARYNLQIRTSWVIIMAPNIQRKSPHQNLVESSLA 60
          MRRKIRSPKALSSRPEPLPLKSSARFARYNLQIRTSWVIIMAPNIQRKSPHQNLVESSLA
Sbjct: 1  MRRKIRSPKALSSRPEPLPLKSSARFARYNLQIRTSWVIIMAPNIQRKSPHQNLVESSLA 60

Query: 61 FEV 64
          FEV
Sbjct: 61 FEV 63

The following BLAST results are available for this feature:
BLAST of CsaV3_4G006910 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN53441.12.1e-25100.00hypothetical protein Csa_015219 [Cucumis sativus][more]
BLAST of CsaV3_4G006910 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G006910 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KZY71.0e-25100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G055360 PE=4 SV=1[more]
BLAST of CsaV3_4G006910 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G006910.1CsaV3_4G006910.1mRNA