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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGCGGAGAAAAATCAGAAGCCCAAAGGCTCTCAGCTCGAGGCCAGAGCCGTTGCCCTTAAAGTCATCTGCCCGATTTGCAAGGTTCCTTTTTCTTTGCTTCAATCTTTCTTTCTTTCTTTCTTATAATTGTATTCCATTGGATTTTAGTGTTCTTCCTCTCTTTTAATCTGTATCGTAATCGTACTCCTGTTTTGATGTCATAACAACTGCAACTGCCAACCCCATATTCAATTATCATTTTTCCGTTCTTATGTATAGTGCACTTGATATGGCTGTGCGTTGGTTTCAATTGATATGAAATTCGTTGGAGTTTCATTAGTTTTTTGTCTTCTTTTCTCAAGGCTTGAGTACATAGATTATTTTCACGGATCATTTATTCTAGGGTTTGAAAGAATTCGAAATGGTTTTGTTTACTGGAAATTTTTTAAGCCTTAATTCTAGATGATAGTGAGGTTTGAGTTATACATATAGTACAATCTATTGTGACCAACTACTTGAGATACCGATTAGAAACTATGATACATTATTTTCTGTGTTGCTATGATCTTGTCTTGAGAAATTTTCTTGTTGCAAGAATTGCTGTATGGTTATGTGTTTGTTTGGGCGGATTAGTCAAATTATGCTTGAGTTGAGATTGTTGGGGGAAAAAAATACTCGATAGGATAGACTATAGAGGGAACCTGATGAGGATTTCTCTTTTTGTTTACTCCTTTGGACAACTAAGAAACGGAGAAGTATATGCCACAAGAAAGGGAGACAACAAATTAGAGGATAGGATTGAGGGAACCCTGCCTTAAAAGAGGCGAAAGGAATATTATAAAAAGAGATCCTTCCCATTGTTAATAATCATTAGAAGACTAACAAAAAACGAAAAAGCGAGTGATTAAAACACCAACCAGAGGCCAAACAACTGCAGATGATTAAAAGAAGTATCATAGGAAATAATCTTATTTTCAAAGATTATGCCTTTGGAACCTCGGCCCCTTGGAGCTTCTTCTACCAGCCAATCAATGAGCAAGGTGGCAATGGGGAAAACAAATGATTCACATATGCACCATCTCTAAAAACAAACGACGGGGAATGAGATCCATCTTGAGTGTCCATCTTGGGACGTTGATAATGTTGAGTTTGTCTTTTGTGGGTTAATCTGCTGTGGATTGATTTTTCTCTTGGCTTGTGGGACGAAGTCATAGAGACTCTAAATATTGAATTCAACATAGAAGAGAGTGGAATAATGATAGGAAATTAGATATGAATTTGTTTATCCTTGCTTTTGATACTTGAAAGTATATCTGTTCTTCCCCCACGACCGTGTATTTGATCATCTTTTTTCTTTTATTCTAACCTCAGGTACAACTTGCAAATCAGAACCAGTTGGGTGATCATTATGGCTCCAAACATCCAAAGGAAAAGCCCCCATCAGAATCTGGTTGAATCTTCGCTTGCATTTGAAGTATGA mRNA sequence ATGCGGAGAAAAATCAGAAGCCCAAAGGCTCTCAGCTCGAGGCCAGAGCCGTTGCCCTTAAAGTCATCTGCCCGATTTGCAAGGTACAACTTGCAAATCAGAACCAGTTGGGTGATCATTATGGCTCCAAACATCCAAAGGAAAAGCCCCCATCAGAATCTGGTTGAATCTTCGCTTGCATTTGAAGTATGA Coding sequence (CDS) ATGCGGAGAAAAATCAGAAGCCCAAAGGCTCTCAGCTCGAGGCCAGAGCCGTTGCCCTTAAAGTCATCTGCCCGATTTGCAAGGTACAACTTGCAAATCAGAACCAGTTGGGTGATCATTATGGCTCCAAACATCCAAAGGAAAAGCCCCCATCAGAATCTGGTTGAATCTTCGCTTGCATTTGAAGTATGA Protein sequence MRRKIRSPKALSSRPEPLPLKSSARFARYNLQIRTSWVIIMAPNIQRKSPHQNLVESSLAFEV*
Homology
BLAST of CsaV3_4G006910.1 vs. NCBI nr
Match: KGN53441.1 (hypothetical protein Csa_015219 [Cucumis sativus]) HSP 1 Score: 125.2 bits (313), Expect = 2.1e-25 Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0
Query: 1 MRRKIRSPKALSSRPEPLPLKSSARFARYNLQIRTSWVIIMAPNIQRKSPHQNLVESSLA 60
MRRKIRSPKALSSRPEPLPLKSSARFARYNLQIRTSWVIIMAPNIQRKSPHQNLVESSLA
Sbjct: 1 MRRKIRSPKALSSRPEPLPLKSSARFARYNLQIRTSWVIIMAPNIQRKSPHQNLVESSLA 60
Query: 61 FEV 64
FEV
Sbjct: 61 FEV 63
BLAST of CsaV3_4G006910.1 vs. ExPASy TrEMBL
Match: A0A0A0KZY7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G055360 PE=4 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 1.0e-25 Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0
Query: 1 MRRKIRSPKALSSRPEPLPLKSSARFARYNLQIRTSWVIIMAPNIQRKSPHQNLVESSLA 60
MRRKIRSPKALSSRPEPLPLKSSARFARYNLQIRTSWVIIMAPNIQRKSPHQNLVESSLA
Sbjct: 1 MRRKIRSPKALSSRPEPLPLKSSARFARYNLQIRTSWVIIMAPNIQRKSPHQNLVESSLA 60
Query: 61 FEV 64
FEV
Sbjct: 61 FEV 63
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KGN53441.1 | 2.1e-25 | 100.00 | hypothetical protein Csa_015219 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0KZY7 | 1.0e-25 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G055360 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CsaV3_4G006910.1.exon2 | CsaV3_4G006910.1.exon2 | exon |
| CsaV3_4G006910.1.exon1 | CsaV3_4G006910.1.exon1 | exon |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CsaV3_4G006910.1.cds2 | CsaV3_4G006910.1.cds2 | CDS |
| CsaV3_4G006910.1.cds1 | CsaV3_4G006910.1.cds1 | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CsaV3_4G006910.1 | CsaV3_4G006910.1-protein | polypeptide |
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