Homology
BLAST of CsaV3_4G002630 vs. NCBI nr
Match:
XP_004152311.2 (pentatricopeptide repeat-containing protein At1g62350 [Cucumis sativus])
HSP 1 Score: 485.3 bits (1248), Expect = 3.0e-133
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0
Query: 1 MKSTLVGPLQLHFLQLGLRQNLTNRSLRCGTAAPPPNIICGLRKGSNRPLGLSRVPSNEA 60
MKSTLVGPLQLHFLQLGLRQNLTNRSLRCGTAAPPPNIICGLRKGSNRPLGLSRVPSNEA
Sbjct: 8 MKSTLVGPLQLHFLQLGLRQNLTNRSLRCGTAAPPPNIICGLRKGSNRPLGLSRVPSNEA 67
Query: 61 IQAVQSLKLAKSTSKMEDVINTKLGRLLKADLFDALSELQRQNELELSLQVFKFMQNEEW 120
IQAVQSLKLAKSTSKMEDVINTKLGRLLKADLFDALSELQRQNELELSLQVFKFMQNEEW
Sbjct: 68 IQAVQSLKLAKSTSKMEDVINTKLGRLLKADLFDALSELQRQNELELSLQVFKFMQNEEW 127
Query: 121 FEPDLRLYHGMIMLMGKNKMIEMAEEVFHKLRKDGLEPDTRAFNEMMGAYLQVDMIERAV 180
FEPDLRLYHGMIMLMGKNKMIEMAEEVFHKLRKDGLEPDTRAFNEMMGAYLQVDMIERAV
Sbjct: 128 FEPDLRLYHGMIMLMGKNKMIEMAEEVFHKLRKDGLEPDTRAFNEMMGAYLQVDMIERAV 187
Query: 181 ETYRLMIASGCTPDELTFKILIKNLEKFREEFAVVVKKDCNEYLDNPQKFFNDNGQKLTT 240
ETYRLMIASGCTPDELTFKILIKNLEKFREEFAVVVKKDCNEYLDNPQKFFNDNGQKLTT
Sbjct: 188 ETYRLMIASGCTPDELTFKILIKNLEKFREEFAVVVKKDCNEYLDNPQKFFNDNGQKLTT 247
Query: 241 KVRIL 246
KVRIL
Sbjct: 248 KVRIL 252
BLAST of CsaV3_4G002630 vs. NCBI nr
Match:
KGN53003.1 (hypothetical protein Csa_015115 [Cucumis sativus])
HSP 1 Score: 485.3 bits (1248), Expect = 3.0e-133
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0
Query: 1 MKSTLVGPLQLHFLQLGLRQNLTNRSLRCGTAAPPPNIICGLRKGSNRPLGLSRVPSNEA 60
MKSTLVGPLQLHFLQLGLRQNLTNRSLRCGTAAPPPNIICGLRKGSNRPLGLSRVPSNEA
Sbjct: 1 MKSTLVGPLQLHFLQLGLRQNLTNRSLRCGTAAPPPNIICGLRKGSNRPLGLSRVPSNEA 60
Query: 61 IQAVQSLKLAKSTSKMEDVINTKLGRLLKADLFDALSELQRQNELELSLQVFKFMQNEEW 120
IQAVQSLKLAKSTSKMEDVINTKLGRLLKADLFDALSELQRQNELELSLQVFKFMQNEEW
Sbjct: 61 IQAVQSLKLAKSTSKMEDVINTKLGRLLKADLFDALSELQRQNELELSLQVFKFMQNEEW 120
Query: 121 FEPDLRLYHGMIMLMGKNKMIEMAEEVFHKLRKDGLEPDTRAFNEMMGAYLQVDMIERAV 180
FEPDLRLYHGMIMLMGKNKMIEMAEEVFHKLRKDGLEPDTRAFNEMMGAYLQVDMIERAV
Sbjct: 121 FEPDLRLYHGMIMLMGKNKMIEMAEEVFHKLRKDGLEPDTRAFNEMMGAYLQVDMIERAV 180
Query: 181 ETYRLMIASGCTPDELTFKILIKNLEKFREEFAVVVKKDCNEYLDNPQKFFNDNGQKLTT 240
ETYRLMIASGCTPDELTFKILIKNLEKFREEFAVVVKKDCNEYLDNPQKFFNDNGQKLTT
Sbjct: 181 ETYRLMIASGCTPDELTFKILIKNLEKFREEFAVVVKKDCNEYLDNPQKFFNDNGQKLTT 240
Query: 241 KVRIL 246
KVRIL
Sbjct: 241 KVRIL 245
BLAST of CsaV3_4G002630 vs. NCBI nr
Match:
KAA0044536.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 439.9 bits (1130), Expect = 1.5e-119
Identity = 220/241 (91.29%), Postives = 230/241 (95.44%), Query Frame = 0
Query: 1 MKSTLVGPLQLHFLQLGLRQNLTNRSLRCGTAAPPPNIICGLRKGSNRPLGLSRVPSNEA 60
MKSTL+G LQLHF QLGLRQNLTNRSL C TAAPPPNIICGLRKG +PLG SRVPSNEA
Sbjct: 1 MKSTLMGRLQLHFPQLGLRQNLTNRSLHCCTAAPPPNIICGLRKGLKKPLGRSRVPSNEA 60
Query: 61 IQAVQSLKLAKSTSKMEDVINTKLGRLLKADLFDALSELQRQNELELSLQVFKFMQNEEW 120
IQAVQSLKLAK TSKMEDVINTKL RLLKADLFDAL+ELQRQNELELSLQVFKFMQNEEW
Sbjct: 61 IQAVQSLKLAKCTSKMEDVINTKLSRLLKADLFDALTELQRQNELELSLQVFKFMQNEEW 120
Query: 121 FEPDLRLYHGMIMLMGKNKMIEMAEEVFHKLRKDGLEPDTRAFNEMMGAYLQVDMIERAV 180
+EPDLRLYHGMIM+MGKNKMIEMAEEVFHKLRKDGLEPDTRAFNEMMGAYLQVDMIERA
Sbjct: 121 YEPDLRLYHGMIMMMGKNKMIEMAEEVFHKLRKDGLEPDTRAFNEMMGAYLQVDMIERAA 180
Query: 181 ETYRLMIASGCTPDELTFKILIKNLEKFREEFAVVVKKDCNEYLDNPQKFFNDNGQKLTT 240
+TYRLMIASGCTPD+LTFKILIKNLEKF+EEFA+VVKKDC+EYLDNPQKFFND GQKLTT
Sbjct: 181 DTYRLMIASGCTPDKLTFKILIKNLEKFKEEFAIVVKKDCHEYLDNPQKFFNDEGQKLTT 240
Query: 241 K 242
K
Sbjct: 241 K 241
BLAST of CsaV3_4G002630 vs. NCBI nr
Match:
XP_008454079.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g62350-like [Cucumis melo] >TYK17047.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 437.6 bits (1124), Expect = 7.2e-119
Identity = 219/241 (90.87%), Postives = 229/241 (95.02%), Query Frame = 0
Query: 1 MKSTLVGPLQLHFLQLGLRQNLTNRSLRCGTAAPPPNIICGLRKGSNRPLGLSRVPSNEA 60
MKSTL+G LQLHF +LGLRQNLTNRSL C TAAPPPNIICGLRKG +PLG SRVPSNEA
Sbjct: 1 MKSTLMGRLQLHFPELGLRQNLTNRSLHCCTAAPPPNIICGLRKGLKKPLGRSRVPSNEA 60
Query: 61 IQAVQSLKLAKSTSKMEDVINTKLGRLLKADLFDALSELQRQNELELSLQVFKFMQNEEW 120
IQAVQSLKLAK TSKMEDVINTKL RLLKADLFDAL+ELQRQNELELSLQVFKFMQNEEW
Sbjct: 61 IQAVQSLKLAKCTSKMEDVINTKLSRLLKADLFDALTELQRQNELELSLQVFKFMQNEEW 120
Query: 121 FEPDLRLYHGMIMLMGKNKMIEMAEEVFHKLRKDGLEPDTRAFNEMMGAYLQVDMIERAV 180
+EPDLRLYHGMIM+MGKNKMIEMAEEVFHKLRKDGLEPDTRAFNEMMGAYLQVDMIERA
Sbjct: 121 YEPDLRLYHGMIMMMGKNKMIEMAEEVFHKLRKDGLEPDTRAFNEMMGAYLQVDMIERAA 180
Query: 181 ETYRLMIASGCTPDELTFKILIKNLEKFREEFAVVVKKDCNEYLDNPQKFFNDNGQKLTT 240
+TYRLMIASGCTPD+LTFKILIKNLEKF+EEFA+VVKKDC EYLDNPQKFFND GQKLTT
Sbjct: 181 DTYRLMIASGCTPDKLTFKILIKNLEKFKEEFAIVVKKDCYEYLDNPQKFFNDEGQKLTT 240
Query: 241 K 242
K
Sbjct: 241 K 241
BLAST of CsaV3_4G002630 vs. NCBI nr
Match:
XP_038878176.1 (pentatricopeptide repeat-containing protein At1g62350-like [Benincasa hispida] >XP_038878177.1 pentatricopeptide repeat-containing protein At1g62350-like [Benincasa hispida])
HSP 1 Score: 408.3 bits (1048), Expect = 4.7e-110
Identity = 206/245 (84.08%), Postives = 222/245 (90.61%), Query Frame = 0
Query: 1 MKSTLVGPLQLHFLQLGLRQNLTNRSLRCGTAAPPPNIICGLRKGSNRPLGLSRVPSNEA 60
MKSTL+G LQ HF QLGLRQ+LTN SL C TAAPPPNIICGLRKG +PLG SRVPS EA
Sbjct: 1 MKSTLMGSLQFHFPQLGLRQDLTNPSLHCCTAAPPPNIICGLRKGLRKPLGRSRVPSIEA 60
Query: 61 IQAVQSLKLAKSTSKMEDVINTKLGRLLKADLFDALSELQRQNELELSLQVFKFMQNEEW 120
IQAVQSLKLAKSTSKMEDVIN+KL RLLKADLFDAL+ELQRQNELELSLQVFKF+QNEEW
Sbjct: 61 IQAVQSLKLAKSTSKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVFKFIQNEEW 120
Query: 121 FEPDLRLYHGMIMLMGKNKMIEMAEEVFHKLRKDGLEPDTRAFNEMMGAYLQVDMIERAV 180
+EPDLRLYHGMI++ GKNKMIEMAEE+FHKL+KDGLEPD RAFNEMMGAYLQVDM+ERAV
Sbjct: 121 YEPDLRLYHGMILMTGKNKMIEMAEEIFHKLKKDGLEPDIRAFNEMMGAYLQVDMVERAV 180
Query: 181 ETYRLMIASGCTPDELTFKILIKNLEKFREEFAVVVKKDCNEYLDNPQKFFNDNGQKLTT 240
ETY LM ASGCTPD+LTFKILIKNLEKFREEFA VVKK+CN YLD+P+KF ND QK T
Sbjct: 181 ETYELMKASGCTPDKLTFKILIKNLEKFREEFAAVVKKECNVYLDSPEKFLNDVEQKSTA 240
Query: 241 KVRIL 246
K RIL
Sbjct: 241 KGRIL 245
BLAST of CsaV3_4G002630 vs. ExPASy Swiss-Prot
Match:
Q9STF9 (Protein THYLAKOID ASSEMBLY 8-like, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=THA8L PE=1 SV=1)
HSP 1 Score: 96.7 bits (239), Expect = 4.0e-19
Identity = 54/177 (30.51%), Postives = 101/177 (57.06%), Query Frame = 0
Query: 34 PPPNIICGLRKGSNRPLGL----SRVPSNEAIQAVQSLK-LAKSTSKMEDVINTKLGRLL 93
P P + R RP G ++ EA+ + LK L + K++ I T + RLL
Sbjct: 47 PKPFTVFVSRFHDGRPRGPLWRGKKLIGKEALFVILGLKRLKEDDEKLDKFIKTHVFRLL 106
Query: 94 KADLFDALSELQRQNELELSLQVFKFMQNEEWFEPDLRLYHGMIMLMGKNKMIEMAEEVF 153
K D+ + EL+RQ E L++++F+ +Q +EW++PD+ +Y +I+ + K+K ++ A ++
Sbjct: 107 KLDMLAVIGELERQEETALAIKMFEVIQKQEWYQPDVFMYKDLIVSLAKSKRMDEAMALW 166
Query: 154 HKLRKDGLEPDTRAFNEMMGAYLQVDMIERAVETYRLMIASGCTPDELTFKILIKNL 206
K++K+ L PD++ + E++ +L+ A+ Y M+ S P+EL F++L+K L
Sbjct: 167 EKMKKENLFPDSQTYTEVIRGFLRDGCPADAMNVYEDMLKSPDPPEELPFRVLLKGL 223
BLAST of CsaV3_4G002630 vs. ExPASy Swiss-Prot
Match:
Q1PFH7 (Pentatricopeptide repeat-containing protein At1g62350 OS=Arabidopsis thaliana OX=3702 GN=At1g62350 PE=2 SV=1)
HSP 1 Score: 87.4 bits (215), Expect = 2.4e-16
Identity = 53/191 (27.75%), Postives = 103/191 (53.93%), Query Frame = 0
Query: 57 SNEAIQAVQSLKLAKSTS-KMEDVINTKLGRLLKADLFDALSELQRQNELELSLQVFKFM 116
S E + A + LK ++ S +++ I + + RLLK+DL L+E QRQN++ L +++++ +
Sbjct: 2 SKEGLIAAKELKRLQTQSVRLDRFIGSHVSRLLKSDLVSVLAEFQRQNQVFLCMKLYEVV 61
Query: 117 QNEEWFEPDLRLYHGMIMLMGKNKMIEMAEEVFHKLRKDGLEPDTRAFNEMMGAYLQVDM 176
+ E W+ PD+ Y M+M++ +NK ++ ++V+ L+K+ + D F +++ +L ++
Sbjct: 62 RREIWYRPDMFFYRDMLMMLARNKKVDETKKVWEDLKKEEVLFDQHTFGDLVRGFLDNEL 121
Query: 177 IERAVETYRLMIASGCTPDELTFKILIKNLEKFREEFAVVVKKDCNEYL------DNPQK 236
A+ Y M S P L F++++K L + E VK D E D P+
Sbjct: 122 PLEAMRLYGEMRESPDRPLSLPFRVILKGLVPY-PELREKVKDDFLELFPGMIVYDPPED 181
Query: 237 FFNDNGQKLTT 241
D+ ++ T
Sbjct: 182 ICEDSDEEART 191
BLAST of CsaV3_4G002630 vs. ExPASy Swiss-Prot
Match:
A7LN87 (Pentatricopeptide repeat-containing protein PPR5, chloroplastic OS=Zea mays OX=4577 GN=PPR5 PE=2 SV=1)
HSP 1 Score: 64.3 bits (155), Expect = 2.2e-09
Identity = 46/180 (25.56%), Postives = 92/180 (51.11%), Query Frame = 0
Query: 59 EAIQAVQSL--KLAKSTSKMEDVINTKLGRLLKADLFDALSELQRQNELELSLQVFKFMQ 118
EA + V+SL + A ++ V++ + + F EL R++ L VF++MQ
Sbjct: 56 EAAELVRSLLRRTAGGKERLVPVLDRHVRVVRTEHCFLLFEELGRRDAWLQCLDVFRWMQ 115
Query: 119 NEEWFEPDLRLYHGMIMLMGKNKMIEMAEEVFHKLRKDGLEPDTRAFNEMMGAYL----Q 178
+ W+ D +Y +I +MG+ I MA +F ++R G +PDT +N ++GA+L +
Sbjct: 116 KQRWYVADNGIYSKLISVMGRKGQIRMAMWLFSQMRNSGCKPDTSVYNSLIGAHLHSRDK 175
Query: 179 VDMIERAVETY-RLMIASGCTPDELTFKILIKNLEKFREEFAV-VVKKDCNEYLDNPQKF 231
+ +A+ + ++ C P +T+ IL++ + + V ++ KD +E + +P +
Sbjct: 176 TKALAKALGYFEKMKCIERCQPTIVTYNILLRAFAQAGDTKQVDMLFKDLDESVVSPDVY 235
BLAST of CsaV3_4G002630 vs. ExPASy Swiss-Prot
Match:
Q9LVW6 (Protein THYLAKOID ASSEMBLY 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=THA8 PE=2 SV=1)
HSP 1 Score: 63.9 bits (154), Expect = 2.9e-09
Identity = 55/180 (30.56%), Postives = 87/180 (48.33%), Query Frame = 0
Query: 37 NIICGLRKGSNRPLGLSRVPSNEAIQAVQSLKLAKSTSKMEDVINTKLGRLLKADLFDAL 96
+I CG R + PL R+ S EAIQ++QSLK A T + L RL+K+DL L
Sbjct: 30 SIRCGPR-DNRGPLLKGRILSTEAIQSIQSLKRAHRTGVSLSLTLRPLRRLIKSDLISVL 89
Query: 97 SELQRQNELELSLQVFKFMQNEEWFEP-DLRLYHGMIMLMGKNKMIEMAEEVFHKLRKDG 156
EL RQ+ L++ V ++ E + P DL LY ++ + +NK + + + ++
Sbjct: 90 RELLRQDYCTLAVHVLSTLRTE--YPPLDLVLYADIVNALTRNKEFDEIDRLIGEIDGID 149
Query: 157 LEPDTRAFNEMMGAYLQVDMIERAVETYRLMIASG-----CTPDELTFKILIKNLEKFRE 211
D +A +++ A + + E V Y LM SG DE ++L K L + E
Sbjct: 150 QRSDDKALAKLIRAVVGAERRESVVRVYTLMRESGWGSESWEADEYVAEVLSKGLLRLGE 206
BLAST of CsaV3_4G002630 vs. ExPASy Swiss-Prot
Match:
Q9FKC3 (Pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g48730 PE=2 SV=2)
HSP 1 Score: 61.2 bits (147), Expect = 1.9e-08
Identity = 41/155 (26.45%), Postives = 80/155 (51.61%), Query Frame = 0
Query: 53 SRVPSNEAIQAVQSLKLAKSTSKMEDVINTKLG--RLLKADLFDALSELQRQNELELSLQ 112
+++ S +AI + + KS +I K G +LL + ++L E E ++Q
Sbjct: 82 TKIASRKAISIILRREATKS------IIEKKKGSKKLLPRTVLESLHERITALRWESAIQ 141
Query: 113 VFKFMQNEEWFEPDLRLYHGMIMLMGKNKMIEMAEEVFHKLRKDGLEPDTRAFNEMMGAY 172
VF+ ++ + W++P++ +Y +I+++GK K E A E+F ++ +G + + ++ AY
Sbjct: 142 VFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAY 201
Query: 173 LQVDMIERAVETYRLMIAS-GCTPDELTFKILIKN 205
+ + A M +S C PD T+ ILIK+
Sbjct: 202 SRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKS 230
BLAST of CsaV3_4G002630 vs. ExPASy TrEMBL
Match:
A0A0A0KU23 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G011020 PE=4 SV=1)
HSP 1 Score: 485.3 bits (1248), Expect = 1.5e-133
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0
Query: 1 MKSTLVGPLQLHFLQLGLRQNLTNRSLRCGTAAPPPNIICGLRKGSNRPLGLSRVPSNEA 60
MKSTLVGPLQLHFLQLGLRQNLTNRSLRCGTAAPPPNIICGLRKGSNRPLGLSRVPSNEA
Sbjct: 1 MKSTLVGPLQLHFLQLGLRQNLTNRSLRCGTAAPPPNIICGLRKGSNRPLGLSRVPSNEA 60
Query: 61 IQAVQSLKLAKSTSKMEDVINTKLGRLLKADLFDALSELQRQNELELSLQVFKFMQNEEW 120
IQAVQSLKLAKSTSKMEDVINTKLGRLLKADLFDALSELQRQNELELSLQVFKFMQNEEW
Sbjct: 61 IQAVQSLKLAKSTSKMEDVINTKLGRLLKADLFDALSELQRQNELELSLQVFKFMQNEEW 120
Query: 121 FEPDLRLYHGMIMLMGKNKMIEMAEEVFHKLRKDGLEPDTRAFNEMMGAYLQVDMIERAV 180
FEPDLRLYHGMIMLMGKNKMIEMAEEVFHKLRKDGLEPDTRAFNEMMGAYLQVDMIERAV
Sbjct: 121 FEPDLRLYHGMIMLMGKNKMIEMAEEVFHKLRKDGLEPDTRAFNEMMGAYLQVDMIERAV 180
Query: 181 ETYRLMIASGCTPDELTFKILIKNLEKFREEFAVVVKKDCNEYLDNPQKFFNDNGQKLTT 240
ETYRLMIASGCTPDELTFKILIKNLEKFREEFAVVVKKDCNEYLDNPQKFFNDNGQKLTT
Sbjct: 181 ETYRLMIASGCTPDELTFKILIKNLEKFREEFAVVVKKDCNEYLDNPQKFFNDNGQKLTT 240
Query: 241 KVRIL 246
KVRIL
Sbjct: 241 KVRIL 245
BLAST of CsaV3_4G002630 vs. ExPASy TrEMBL
Match:
A0A5A7TQZ8 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G002830 PE=4 SV=1)
HSP 1 Score: 439.9 bits (1130), Expect = 7.1e-120
Identity = 220/241 (91.29%), Postives = 230/241 (95.44%), Query Frame = 0
Query: 1 MKSTLVGPLQLHFLQLGLRQNLTNRSLRCGTAAPPPNIICGLRKGSNRPLGLSRVPSNEA 60
MKSTL+G LQLHF QLGLRQNLTNRSL C TAAPPPNIICGLRKG +PLG SRVPSNEA
Sbjct: 1 MKSTLMGRLQLHFPQLGLRQNLTNRSLHCCTAAPPPNIICGLRKGLKKPLGRSRVPSNEA 60
Query: 61 IQAVQSLKLAKSTSKMEDVINTKLGRLLKADLFDALSELQRQNELELSLQVFKFMQNEEW 120
IQAVQSLKLAK TSKMEDVINTKL RLLKADLFDAL+ELQRQNELELSLQVFKFMQNEEW
Sbjct: 61 IQAVQSLKLAKCTSKMEDVINTKLSRLLKADLFDALTELQRQNELELSLQVFKFMQNEEW 120
Query: 121 FEPDLRLYHGMIMLMGKNKMIEMAEEVFHKLRKDGLEPDTRAFNEMMGAYLQVDMIERAV 180
+EPDLRLYHGMIM+MGKNKMIEMAEEVFHKLRKDGLEPDTRAFNEMMGAYLQVDMIERA
Sbjct: 121 YEPDLRLYHGMIMMMGKNKMIEMAEEVFHKLRKDGLEPDTRAFNEMMGAYLQVDMIERAA 180
Query: 181 ETYRLMIASGCTPDELTFKILIKNLEKFREEFAVVVKKDCNEYLDNPQKFFNDNGQKLTT 240
+TYRLMIASGCTPD+LTFKILIKNLEKF+EEFA+VVKKDC+EYLDNPQKFFND GQKLTT
Sbjct: 181 DTYRLMIASGCTPDKLTFKILIKNLEKFKEEFAIVVKKDCHEYLDNPQKFFNDEGQKLTT 240
Query: 241 K 242
K
Sbjct: 241 K 241
BLAST of CsaV3_4G002630 vs. ExPASy TrEMBL
Match:
A0A5D3CZ95 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G001960 PE=4 SV=1)
HSP 1 Score: 437.6 bits (1124), Expect = 3.5e-119
Identity = 219/241 (90.87%), Postives = 229/241 (95.02%), Query Frame = 0
Query: 1 MKSTLVGPLQLHFLQLGLRQNLTNRSLRCGTAAPPPNIICGLRKGSNRPLGLSRVPSNEA 60
MKSTL+G LQLHF +LGLRQNLTNRSL C TAAPPPNIICGLRKG +PLG SRVPSNEA
Sbjct: 1 MKSTLMGRLQLHFPELGLRQNLTNRSLHCCTAAPPPNIICGLRKGLKKPLGRSRVPSNEA 60
Query: 61 IQAVQSLKLAKSTSKMEDVINTKLGRLLKADLFDALSELQRQNELELSLQVFKFMQNEEW 120
IQAVQSLKLAK TSKMEDVINTKL RLLKADLFDAL+ELQRQNELELSLQVFKFMQNEEW
Sbjct: 61 IQAVQSLKLAKCTSKMEDVINTKLSRLLKADLFDALTELQRQNELELSLQVFKFMQNEEW 120
Query: 121 FEPDLRLYHGMIMLMGKNKMIEMAEEVFHKLRKDGLEPDTRAFNEMMGAYLQVDMIERAV 180
+EPDLRLYHGMIM+MGKNKMIEMAEEVFHKLRKDGLEPDTRAFNEMMGAYLQVDMIERA
Sbjct: 121 YEPDLRLYHGMIMMMGKNKMIEMAEEVFHKLRKDGLEPDTRAFNEMMGAYLQVDMIERAA 180
Query: 181 ETYRLMIASGCTPDELTFKILIKNLEKFREEFAVVVKKDCNEYLDNPQKFFNDNGQKLTT 240
+TYRLMIASGCTPD+LTFKILIKNLEKF+EEFA+VVKKDC EYLDNPQKFFND GQKLTT
Sbjct: 181 DTYRLMIASGCTPDKLTFKILIKNLEKFKEEFAIVVKKDCYEYLDNPQKFFNDEGQKLTT 240
Query: 241 K 242
K
Sbjct: 241 K 241
BLAST of CsaV3_4G002630 vs. ExPASy TrEMBL
Match:
A0A1S3BX97 (pentatricopeptide repeat-containing protein At1g62350-like OS=Cucumis melo OX=3656 GN=LOC103494600 PE=4 SV=1)
HSP 1 Score: 437.6 bits (1124), Expect = 3.5e-119
Identity = 219/241 (90.87%), Postives = 229/241 (95.02%), Query Frame = 0
Query: 1 MKSTLVGPLQLHFLQLGLRQNLTNRSLRCGTAAPPPNIICGLRKGSNRPLGLSRVPSNEA 60
MKSTL+G LQLHF +LGLRQNLTNRSL C TAAPPPNIICGLRKG +PLG SRVPSNEA
Sbjct: 1 MKSTLMGRLQLHFPELGLRQNLTNRSLHCCTAAPPPNIICGLRKGLKKPLGRSRVPSNEA 60
Query: 61 IQAVQSLKLAKSTSKMEDVINTKLGRLLKADLFDALSELQRQNELELSLQVFKFMQNEEW 120
IQAVQSLKLAK TSKMEDVINTKL RLLKADLFDAL+ELQRQNELELSLQVFKFMQNEEW
Sbjct: 61 IQAVQSLKLAKCTSKMEDVINTKLSRLLKADLFDALTELQRQNELELSLQVFKFMQNEEW 120
Query: 121 FEPDLRLYHGMIMLMGKNKMIEMAEEVFHKLRKDGLEPDTRAFNEMMGAYLQVDMIERAV 180
+EPDLRLYHGMIM+MGKNKMIEMAEEVFHKLRKDGLEPDTRAFNEMMGAYLQVDMIERA
Sbjct: 121 YEPDLRLYHGMIMMMGKNKMIEMAEEVFHKLRKDGLEPDTRAFNEMMGAYLQVDMIERAA 180
Query: 181 ETYRLMIASGCTPDELTFKILIKNLEKFREEFAVVVKKDCNEYLDNPQKFFNDNGQKLTT 240
+TYRLMIASGCTPD+LTFKILIKNLEKF+EEFA+VVKKDC EYLDNPQKFFND GQKLTT
Sbjct: 181 DTYRLMIASGCTPDKLTFKILIKNLEKFKEEFAIVVKKDCYEYLDNPQKFFNDEGQKLTT 240
Query: 241 K 242
K
Sbjct: 241 K 241
BLAST of CsaV3_4G002630 vs. ExPASy TrEMBL
Match:
A0A6J1IY98 (pentatricopeptide repeat-containing protein At1g62350-like OS=Cucurbita maxima OX=3661 GN=LOC111479570 PE=4 SV=1)
HSP 1 Score: 387.5 bits (994), Expect = 4.2e-104
Identity = 196/245 (80.00%), Postives = 216/245 (88.16%), Query Frame = 0
Query: 1 MKSTLVGPLQLHFLQLGLRQNLTNRSLRCGTAAPPPNIICGLRKGSNRPLGLSRVPSNEA 60
MKSTL+G LQLH QLG RQNLTN +L C TA PPPNIICGLRKG +PLG SRVPS E+
Sbjct: 1 MKSTLMGRLQLHLPQLGFRQNLTNPTLHCCTAGPPPNIICGLRKGQRKPLGKSRVPSTES 60
Query: 61 IQAVQSLKLAKSTSKMEDVINTKLGRLLKADLFDALSELQRQNELELSLQVFKFMQNEEW 120
IQAVQSLKLAKS SKMEDVIN+KL RLLKADLFDAL+ELQRQNELELSLQVFKFM+NEEW
Sbjct: 61 IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALAELQRQNELELSLQVFKFMRNEEW 120
Query: 121 FEPDLRLYHGMIMLMGKNKMIEMAEEVFHKLRKDGLEPDTRAFNEMMGAYLQVDMIERAV 180
+EPDL LYH MI +MGKNKMIEMAEEVFH ++DGLEPDTRAFNEMMGAYLQVDM+ERAV
Sbjct: 121 YEPDLNLYHVMIQMMGKNKMIEMAEEVFHDFKRDGLEPDTRAFNEMMGAYLQVDMVERAV 180
Query: 181 ETYRLMIASGCTPDELTFKILIKNLEKFREEFAVVVKKDCNEYLDNPQKFFNDNGQKLTT 240
ETY LM ASGCTPD+LTFKILIKNLE+FREEFA VVKK+C E+LD+P+KF D QKL
Sbjct: 181 ETYELMKASGCTPDKLTFKILIKNLERFREEFAAVVKKECAEFLDSPEKFLRDVEQKL-M 240
Query: 241 KVRIL 246
K++IL
Sbjct: 241 KLQIL 244
BLAST of CsaV3_4G002630 vs. TAIR 10
Match:
AT5G09320.1 (Vacuolar sorting protein 9 (VPS9) domain )
HSP 1 Score: 102.4 bits (254), Expect = 5.1e-22
Identity = 65/210 (30.95%), Postives = 112/210 (53.33%), Query Frame = 0
Query: 43 RKGSNRPLGLSRVPSNEAIQAVQSLKLA----------------KSTSKMEDVINTKLGR 102
R + +PL R+ S EAIQAVQ+LK A S++ ++ VI +K R
Sbjct: 492 RSKNRKPLQRGRMLSIEAIQAVQALKRANPLLPPPPVPSTSTTSSSSALLDRVIISKFRR 551
Query: 103 LLKADLFDALSELQRQNELELSLQVFKFMQNEEWFEPDLRLYHGMIMLMGKNKMIEMAEE 162
LLK D+ L EL RQNE L+L+VF+ ++ E W++P +R+Y MI +M N ++E
Sbjct: 552 LLKFDMVAVLRELLRQNECSLALKVFEEIRKEYWYKPQVRMYTDMITVMADNSLMEEVNY 611
Query: 163 VFHKLRKD-GLEPDTRAFNEMMGAYLQVDMIERAVETYRLMIASGCTPDELTFKILIKNL 222
++ ++ + GL + FN ++ L + + ++ Y M + G PD +F++L+ L
Sbjct: 612 LYSAMKSEKGLMAEIEWFNTLLTILLNHKLFDLVMDCYAFMQSIGYEPDRASFRVLVLGL 671
Query: 223 EKFRE-EFAVVVKKDCNEYLDNPQKFFNDN 235
E E + +V++D +EY +F ++
Sbjct: 672 ESNGEMGLSAIVRQDAHEYYGESLEFIEED 701
BLAST of CsaV3_4G002630 vs. TAIR 10
Match:
AT3G46870.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 96.7 bits (239), Expect = 2.8e-20
Identity = 54/177 (30.51%), Postives = 101/177 (57.06%), Query Frame = 0
Query: 34 PPPNIICGLRKGSNRPLGL----SRVPSNEAIQAVQSLK-LAKSTSKMEDVINTKLGRLL 93
P P + R RP G ++ EA+ + LK L + K++ I T + RLL
Sbjct: 47 PKPFTVFVSRFHDGRPRGPLWRGKKLIGKEALFVILGLKRLKEDDEKLDKFIKTHVFRLL 106
Query: 94 KADLFDALSELQRQNELELSLQVFKFMQNEEWFEPDLRLYHGMIMLMGKNKMIEMAEEVF 153
K D+ + EL+RQ E L++++F+ +Q +EW++PD+ +Y +I+ + K+K ++ A ++
Sbjct: 107 KLDMLAVIGELERQEETALAIKMFEVIQKQEWYQPDVFMYKDLIVSLAKSKRMDEAMALW 166
Query: 154 HKLRKDGLEPDTRAFNEMMGAYLQVDMIERAVETYRLMIASGCTPDELTFKILIKNL 206
K++K+ L PD++ + E++ +L+ A+ Y M+ S P+EL F++L+K L
Sbjct: 167 EKMKKENLFPDSQTYTEVIRGFLRDGCPADAMNVYEDMLKSPDPPEELPFRVLLKGL 223
BLAST of CsaV3_4G002630 vs. TAIR 10
Match:
AT1G62350.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 87.4 bits (215), Expect = 1.7e-17
Identity = 53/191 (27.75%), Postives = 103/191 (53.93%), Query Frame = 0
Query: 57 SNEAIQAVQSLKLAKSTS-KMEDVINTKLGRLLKADLFDALSELQRQNELELSLQVFKFM 116
S E + A + LK ++ S +++ I + + RLLK+DL L+E QRQN++ L +++++ +
Sbjct: 2 SKEGLIAAKELKRLQTQSVRLDRFIGSHVSRLLKSDLVSVLAEFQRQNQVFLCMKLYEVV 61
Query: 117 QNEEWFEPDLRLYHGMIMLMGKNKMIEMAEEVFHKLRKDGLEPDTRAFNEMMGAYLQVDM 176
+ E W+ PD+ Y M+M++ +NK ++ ++V+ L+K+ + D F +++ +L ++
Sbjct: 62 RREIWYRPDMFFYRDMLMMLARNKKVDETKKVWEDLKKEEVLFDQHTFGDLVRGFLDNEL 121
Query: 177 IERAVETYRLMIASGCTPDELTFKILIKNLEKFREEFAVVVKKDCNEYL------DNPQK 236
A+ Y M S P L F++++K L + E VK D E D P+
Sbjct: 122 PLEAMRLYGEMRESPDRPLSLPFRVILKGLVPY-PELREKVKDDFLELFPGMIVYDPPED 181
Query: 237 FFNDNGQKLTT 241
D+ ++ T
Sbjct: 182 ICEDSDEEART 191
BLAST of CsaV3_4G002630 vs. TAIR 10
Match:
AT3G27750.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: Vacuolar sorting protein 9 (VPS9) domain (TAIR:AT5G09320.1); Has 106 Blast hits to 106 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 102; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 63.9 bits (154), Expect = 2.0e-10
Identity = 55/180 (30.56%), Postives = 87/180 (48.33%), Query Frame = 0
Query: 37 NIICGLRKGSNRPLGLSRVPSNEAIQAVQSLKLAKSTSKMEDVINTKLGRLLKADLFDAL 96
+I CG R + PL R+ S EAIQ++QSLK A T + L RL+K+DL L
Sbjct: 30 SIRCGPR-DNRGPLLKGRILSTEAIQSIQSLKRAHRTGVSLSLTLRPLRRLIKSDLISVL 89
Query: 97 SELQRQNELELSLQVFKFMQNEEWFEP-DLRLYHGMIMLMGKNKMIEMAEEVFHKLRKDG 156
EL RQ+ L++ V ++ E + P DL LY ++ + +NK + + + ++
Sbjct: 90 RELLRQDYCTLAVHVLSTLRTE--YPPLDLVLYADIVNALTRNKEFDEIDRLIGEIDGID 149
Query: 157 LEPDTRAFNEMMGAYLQVDMIERAVETYRLMIASG-----CTPDELTFKILIKNLEKFRE 211
D +A +++ A + + E V Y LM SG DE ++L K L + E
Sbjct: 150 QRSDDKALAKLIRAVVGAERRESVVRVYTLMRESGWGSESWEADEYVAEVLSKGLLRLGE 206
BLAST of CsaV3_4G002630 vs. TAIR 10
Match:
AT5G48730.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 61.2 bits (147), Expect = 1.3e-09
Identity = 41/155 (26.45%), Postives = 80/155 (51.61%), Query Frame = 0
Query: 53 SRVPSNEAIQAVQSLKLAKSTSKMEDVINTKLG--RLLKADLFDALSELQRQNELELSLQ 112
+++ S +AI + + KS +I K G +LL + ++L E E ++Q
Sbjct: 82 TKIASRKAISIILRREATKS------IIEKKKGSKKLLPRTVLESLHERITALRWESAIQ 141
Query: 113 VFKFMQNEEWFEPDLRLYHGMIMLMGKNKMIEMAEEVFHKLRKDGLEPDTRAFNEMMGAY 172
VF+ ++ + W++P++ +Y +I+++GK K E A E+F ++ +G + + ++ AY
Sbjct: 142 VFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAY 201
Query: 173 LQVDMIERAVETYRLMIAS-GCTPDELTFKILIKN 205
+ + A M +S C PD T+ ILIK+
Sbjct: 202 SRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKS 230
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_004152311.2 | 3.0e-133 | 100.00 | pentatricopeptide repeat-containing protein At1g62350 [Cucumis sativus] | [more] |
KGN53003.1 | 3.0e-133 | 100.00 | hypothetical protein Csa_015115 [Cucumis sativus] | [more] |
KAA0044536.1 | 1.5e-119 | 91.29 | pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] | [more] |
XP_008454079.1 | 7.2e-119 | 90.87 | PREDICTED: pentatricopeptide repeat-containing protein At1g62350-like [Cucumis m... | [more] |
XP_038878176.1 | 4.7e-110 | 84.08 | pentatricopeptide repeat-containing protein At1g62350-like [Benincasa hispida] >... | [more] |
Match Name | E-value | Identity | Description | |
Q9STF9 | 4.0e-19 | 30.51 | Protein THYLAKOID ASSEMBLY 8-like, chloroplastic OS=Arabidopsis thaliana OX=3702... | [more] |
Q1PFH7 | 2.4e-16 | 27.75 | Pentatricopeptide repeat-containing protein At1g62350 OS=Arabidopsis thaliana OX... | [more] |
A7LN87 | 2.2e-09 | 25.56 | Pentatricopeptide repeat-containing protein PPR5, chloroplastic OS=Zea mays OX=4... | [more] |
Q9LVW6 | 2.9e-09 | 30.56 | Protein THYLAKOID ASSEMBLY 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=T... | [more] |
Q9FKC3 | 1.9e-08 | 26.45 | Pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0KU23 | 1.5e-133 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G011020 PE=4 SV=1 | [more] |
A0A5A7TQZ8 | 7.1e-120 | 91.29 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A5D3CZ95 | 3.5e-119 | 90.87 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3BX97 | 3.5e-119 | 90.87 | pentatricopeptide repeat-containing protein At1g62350-like OS=Cucumis melo OX=36... | [more] |
A0A6J1IY98 | 4.2e-104 | 80.00 | pentatricopeptide repeat-containing protein At1g62350-like OS=Cucurbita maxima O... | [more] |
Match Name | E-value | Identity | Description | |
AT5G09320.1 | 5.1e-22 | 30.95 | Vacuolar sorting protein 9 (VPS9) domain | [more] |
AT3G46870.1 | 2.8e-20 | 30.51 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G62350.1 | 1.7e-17 | 27.75 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G27750.1 | 2.0e-10 | 30.56 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... | [more] |
AT5G48730.1 | 1.3e-09 | 26.45 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |