CsaV3_4G002630 (gene) Cucumber (Chinese Long) v3

InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Position :
0
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ATGAAATCTACTCTAGTGGGTCCTCTTCAACTCCATTTTCTTCAATTGGGTCTTCGCCAAAACCTCACGAACCGAAGCCTCCGTTGTGGTACGGCAGCTCCACCTCCAAATATCATTTGTGGCCTCAGAAAGGGCTCGAACAGGCCCTTAGGGTTGTCAAGGGTGCCCTCCAATGAGGCAATTCAAGCAGTTCAATCTCTCAAGCTTGCTAAATCCACCTCCAAAATGGAAGACGTTATCAATACCAAGCTCGGCAGATTGCTTAAAGCAGACTTGTTTGATGCTCTGTCTGAATTACAAAGGCAAAATGAACTGGAATTATCGCTTCAGGTCTTCAAATTTATGCAAAATGAAGAATGGTTCGAGCCAGATTTAAGGTTATACCATGGAATGATTATGCTGATGGGAAAGAACAAAATGATTGAAATGGCTGAAGAGGTTTTTCATAAGTTAAGAAAGGATGGGTTAGAACCAGATACAAGAGCTTTCAATGAAATGATGGGAGCATATCTGCAAGTGGACATGATCGAAAGAGCTGTTGAGACATACAGATTGATGATAGCTTCAGGTTGTACTCCAGATGAACTGACTTTCAAGATCTTGATAAAGAATCTTGAGAAATTTAGGGAAGAATTTGCTGTAGTGGTGAAGAAAGACTGTAATGAGTACTTGGATAATCCTCAGAAGTTTTTCAACGATAACGGGCAGAAACTGACAACGAAAGTTCGAATTCTTTAA100200300400500600700Expect = 3.3E-6 / Score = 24.9Expect = 2.0E-6 / Score = 25.6Expect = 2.1E-9 / Score = 37.4Expect = 0.0016 / Score = 18.5Score = 10.446177Score = 10.007725Expect = 2.0E-43 / Score = 150.2Score = Score = SequenceTIGR00756PF13041PF01535PS51375PS51375G3DSA:1.25.40.10PTHR47594PTHR47594:SF5
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 127..160
e-value: 3.3E-6
score: 24.9
coord: 162..195
e-value: 2.0E-6
score: 25.6
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 158..205
e-value: 2.1E-9
score: 37.4
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 128..156
e-value: 0.0016
score: 18.5
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 159..193
score: 10.446177
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 124..158
score: 10.007725
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 56..224
e-value: 2.0E-43
score: 150.2
IPR044190Protein THYLAKOID ASSEMBLY 8-likePANTHERPTHR47594PPR CONTAINING PLANT-LIKE PROTEINcoord: 7..235
NoneNo IPR availablePANTHERPTHR47594:SF5PPR CONTAINING PLANT-LIKE PROTEINcoord: 7..235