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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGGAAACCCTAAAGCTTCAGCCATGGCGTCTTGAACAGAGAGAAACAGCCATGGAAATTTCGGCAATCTGCAACTGTGAGAAATGTTTTCATCCTTTTTTTTCTCTCTTTTTTCAGTTTTCTTTTTCTTTCTTTTCGCTCGGTCCCTCTCTTTTAGGCACGTGACCATTCTTTGTCCCGTTCCTCTTACTTTTCTTCGGATTTATTCTTTTCCATTTTTTTCCTTTACTAAAATAATTTTCGGAACTATATATATATAATAACATGGTTTTCTAAACGGTCGGTTGTTGAATATATATATATATATTTTAATTTTACAAATATACAGCGAGATCCGTAAGTCTATAAACGTTAGAAATCTATTATCATATTACACGACCATGATATTCTAACACTGAGAGAAGTCTATCACATATATATTTTGTTATATTTACAATTTTATTTTAAATGTTGGTATATAAGAAGTTGCCACAAATTATAATTATCCCAAAAAAAAGTGACGATTGAAATCAAGTGGGTTTTCATTAGTATAGTTGCATCGGATAATACTTTTAGGTATAATAAGTGTATAACAACTTTTATAAGAAATTGTAAATATAATAAAATCTATTAGTGATAGACTATTACTGGTTATATGGTTAATCACTTTAACAAAATCTATTTACACTCTATGACAAAACTAAGAGTAATGAGTTTTTGTACTAGGCTTTTGAGCGGTAAATAATTTGTCTTTTTTATTGTTCTTGAAAAAACTCTAATATTACTCTTACTCTTAAATTGATAAAATATTTATACTTTTTAAAAGGAACATTTTTAAATTTAGTAAAATAAATTAAAATATTTACAAACTATCGCAAAATTTTGGATTTTATCAACGATAGAAACTAATAACTTTTTATCACTATCTATCAACGTCACTTTATAGAATCTGAAATTTTTTTATATGTTATAAATATATGGTCAAATTTTTTATTTTTGTCAATTTTTCTTTCTAAAAGAATCAAGTTTAATTAATTTTATTTTTAAATGATTTTGTTATATTGATGGTAAATATTTTATCAATTTTTTCTATTTTTAAAAAAAAAACTTCTTTAATTTTCTTCATTCATTATCTACTTTTTATTGATTGTTTAAAAAAATAATTTTTAAATGATTGTTTATATTTTAATGTTTGACAAACAATTCAACCATGGTTCTTAAAAATGATGCAAATTATTGCTTGAAATGGAGAGGAAATATGTTTCATTTTCAAACACAAAATGACATCCAATAAGGCTTTAAATAAGCATTCCGTTTTTAATTAAATTTACTAACATCTCTTCTATCTCTAAATCTTTTGCATAAATATCTTGTATTGATTTATATTTTAAAAATCGAGTCAAAATTTAAAATTTAAATTGTTTTTAAATTTTAGAATTTTTTTCCATTTTAAAAAATATAAAAGAAATAGTCATTTATCCATAGTTTCATGATTGAAAGACATGAAACACTTTAGTAAAATCATAAATTTTCAATCATTATCAATAATTTATTAGGTCGCTATAAATGTGAAAAAAAGTTAGATATAAAATATCAATATAACAACATATATATTCTCTATTTTTAACTTGAATTTAAATTACTTACTCTGACAAAATAATTTAGTCATTTCTTCGTACTAATTTTTGATTTATAAACTTATACAAATATTTAAAAATAACTTTTTATTAGATTAGAATCTAATTTACGTATCTATTACCAAATAAATATTTAAAATCAAGAGAACGTATAGTTATACGTCTCTTTCGAGAAATTCAATAAAATTTGAACGATCTCTAAAAATAGAAACCTTTATATTCTTTTTTTTTTCCTTTACAATATATGAACAAAACGACCTATTTAACATTTTACAATAGAAACAACAAGATTTATGAGCAATGTTGGGTAAGACAACTCTAAAAGGTTGATTTGGTGCAATTTCATTGACTATAAAGTTTCTAATTAACCTCATTTTGTTAGAACTTGGGAAAAAAAGAATGTGATTACATTTATTGCAAGAAGTTGGTGCACATAATTATTATATATGGGCATGTTACCTTTTTTCTTTTCTTTTTCCATATTCATATCACATTTATTTTAATCCTTAAAGTAGGTGACTTTTGGTGTTTAACACATTTTAGAATGATTTTAAAAGAGTTATTATATTTCACTTTTCATTAATTGATTGTCTGATAATGGAGTTTGAGTAACTATTTCGTTGTCAATGGGTGGTGCATATTCTTACAATATCTCTTTGGAAGCTAAAAGCTAAAATATATCACGTTTGTCAATACACAGAAAACTTGTTTCTAAGGATGATAAGGATAAAATTACCTTTCGCTTGTGAAAAGACTCGTTTAACCATGAGAATCTCCTGCTTGCATAATGATAGAAACTCAGCTCTCAGTACTAAATGCTCTCACTCATATTCATTGTTTGTCTTGCAAAAGTAGTCATGACAACTACTTGATGCTTGTGCTAAATGCTCCCACTTTGTCTCCCTGCACGTTTCTCGTTTGTCTTGTATATTAGAGAAATTGAGAGTCCGACATTGAAAAAACCAAAGAGACTCATACTCCATATAAGATAGATGAACTACTTTGTAAAGTCATTGATATACTGTATTTGAAATTCCATGAGCAACTCCGGTAAAACATAAAAGAGAATGTGGAAAGGAGGATAAATGGGTAGAACGCGATATTAAAAAAATGATGAGAGAAATTTTTGTACGAGGCATGACTAGGCGAGGAACAAACTAAATATTGGATTTAAAAAAGAATGAAAAAACCAGAGGAAAGAAAGAAGAAATATTGCATTCGAGATTAAAGTGATAATCCACCGTGACGTCGATATAAAAAAGGACCAAATTTCATTGATTTTCAAACTTGAGGTTAATTTTCATTAGGTAAATACGTGAAATCCAATCTCATTTAACCTAACAAAGTATAATTTCAATTTAAATTTTTATCTAATAAATTAACGCAACTAATTTTAAAACAGAGAGTTTGTAAAAATAGCAAAAAAAAATTATGATAATAGAGTTAATTGTCCCTTGTATTTTCTAACTCGCAAAAATAACAAATTTAAAACCAGATTATAATTACTAGTCATATTTATCAAATTTACAATATATAAAAAGATGTGTTATGAGTCGTTTTTTCATTTTTTTTTTATCATTCAATGCAATTTTCGATTTAATATCATGAGCAGTAAATTTATATTTATAATCTTGAAATAATGAACTAAATTTATAGTTTCAAAATTTAGAATCAAATAGATATATAGTTTTAAATTGACCTAATAATTGTTGTAATATACACTTTTACCCTTACTTCCTATTAATATTGAGATAAACTAAAATTTATTTATAAGTCTTTTATTTTCCAGGGGAAGTTGGAGATAAACAAGGCCTCTCCTCTCATAATTTCATAAATATCACAAATCTGAGAGATCAACACTACTCTTCAATCCTCATTGTTCTTTTTACCCTTTACCAGTTTTCATCTGATCTCCGTTTCCCTTTACCTCACGACTTCTCGAAAAATAGTTTCCGTTTCGATTTTACTTCTCCGGCCACTCTCCCTCAAGGCGGCGCCGCTGCGCTGGCAATATAA mRNA sequence ATGGAAACCCTAAAGCTTCAGCCATGGCGTCTTGAACAGAGAGAAACAGCCATGGAAATTTCGGCAATCTGCAACTGGGAAGTTGGAGATAAACAAGGCCTCTCCTCTCATAATTTCATAAATATCACAAATCTGAGAGATCAACACTACTCTTCAATCCTCATTGTTCTTTTTACCCTTTACCAGTTTTCATCTGATCTCCGTTTCCCTTTACCTCACGACTTCTCGAAAAATAGTTTCCGTTTCGATTTTACTTCTCCGGCCACTCTCCCTCAAGGCGGCGCCGCTGCGCTGGCAATATAA Coding sequence (CDS) ATGGAAACCCTAAAGCTTCAGCCATGGCGTCTTGAACAGAGAGAAACAGCCATGGAAATTTCGGCAATCTGCAACTGGGAAGTTGGAGATAAACAAGGCCTCTCCTCTCATAATTTCATAAATATCACAAATCTGAGAGATCAACACTACTCTTCAATCCTCATTGTTCTTTTTACCCTTTACCAGTTTTCATCTGATCTCCGTTTCCCTTTACCTCACGACTTCTCGAAAAATAGTTTCCGTTTCGATTTTACTTCTCCGGCCACTCTCCCTCAAGGCGGCGCCGCTGCGCTGGCAATATAA Protein sequence METLKLQPWRLEQRETAMEISAICNWEVGDKQGLSSHNFINITNLRDQHYSSILIVLFTLYQFSSDLRFPLPHDFSKNSFRFDFTSPATLPQGGAAALAI*
Homology
BLAST of CsaV3_2G002060 vs. NCBI nr
Match: KGN60597.1 (hypothetical protein Csa_019341 [Cucumis sativus]) HSP 1 Score: 204.9 bits (520), Expect = 3.2e-49 Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0
Query: 1 METLKLQPWRLEQRETAMEISAICNWEVGDKQGLSSHNFINITNLRDQHYSSILIVLFTL 60
METLKLQPWRLEQRETAMEISAICNWEVGDKQGLSSHNFINITNLRDQHYSSILIVLFTL
Sbjct: 1 METLKLQPWRLEQRETAMEISAICNWEVGDKQGLSSHNFINITNLRDQHYSSILIVLFTL 60
Query: 61 YQFSSDLRFPLPHDFSKNSFRFDFTSPATLPQGGAAALAI 101
YQFSSDLRFPLPHDFSKNSFRFDFTSPATLPQGGAAALAI
Sbjct: 61 YQFSSDLRFPLPHDFSKNSFRFDFTSPATLPQGGAAALAI 100
BLAST of CsaV3_2G002060 vs. ExPASy TrEMBL
Match: A0A0A0LIS3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G002520 PE=4 SV=1) HSP 1 Score: 204.9 bits (520), Expect = 1.6e-49 Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0
Query: 1 METLKLQPWRLEQRETAMEISAICNWEVGDKQGLSSHNFINITNLRDQHYSSILIVLFTL 60
METLKLQPWRLEQRETAMEISAICNWEVGDKQGLSSHNFINITNLRDQHYSSILIVLFTL
Sbjct: 1 METLKLQPWRLEQRETAMEISAICNWEVGDKQGLSSHNFINITNLRDQHYSSILIVLFTL 60
Query: 61 YQFSSDLRFPLPHDFSKNSFRFDFTSPATLPQGGAAALAI 101
YQFSSDLRFPLPHDFSKNSFRFDFTSPATLPQGGAAALAI
Sbjct: 61 YQFSSDLRFPLPHDFSKNSFRFDFTSPATLPQGGAAALAI 100
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| KGN60597.1 | 3.2e-49 | 100.00 | hypothetical protein Csa_019341 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LIS3 | 1.6e-49 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G002520 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
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