CsaV3_2G001150 (gene) Cucumber (Chinese Long) v3

InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Position :
0
Zoom :
x 1
ATGACCCTCTTATTCTTCTCTAGCCGTGCCTACAGGCTTCGAACCTCCAACTTCTCCATTGCTCAGTTTTATAGCCTTGCAGATTCAGTATCACGCGCTCGGCCTTTTTGTGATAGAGAGATAATACGACACTCGGAGGCTTGGCTAGTGAAGGTTGTTTGCACTCTCTTTTTTCGATCGCATTCCCTGAATGCTTGTTTTGGTTATCTAAGTAGAAACTTGAACCCTTCAATCGCTTTTGAGGTTATTAAGAGGTTTAGTGATCCCTTATTGGGTTTGAAGTTTTTTGAGTTTAGTAGAACACACCTGAGCATTAACCATACCTTTAATACCTATGATTTGCTCATGAGGAATCTCTGTAAAGTGGGTCTCAACGATTCTGCAAAAATTGTTTTTGATTGCATGAGGAGTGACGGGATTTTGCCGGATAGTTCCATTTTAGAACTCTTGGTGTCTTCATACGCTCGAATGGGGAAGTTAGATTCTGCCAAAAATTTTCTTAATGAAGTTCACTGTTATGGTATTAAAGTTAGTCCTTTTGTGTATAATAACTTGTTGAATATGTTGGTCAAGCAGAACCTAGTAGATGAAGCTGTCTTACTATTCAGGGAGCACTTGGAACCATATTTCGTTCCAGATGTTTACAGCTTCAATATTTTAATTAGAGGATTGTGCAGAATAGGAGAAATTGATAAGGCTTTTGAGTTTTTCCAGAATATGGGAAATTTTGGTTGCTTTCCTGATATTGTTTCGTATAATACGCTTATAAATGGGTTTTGTAGGGTCAATGAGATTAGTAAAGGGCATGATTTGCTAAAAGAAGATATGTTAATAAAAGGGGTTTCCCCAGATGTTATAACCTATACATCGATTATATCAGGCTATTGCAAATTGGGTGATATGAAGGCAGCTTCTGAGCTTTTTGACGAGATGGTTAGTTCTGGAATCAAACCCAACGACTTCACTTTCAATGTCCTCATTGATGGTTTTGGCAAGGTTGGAAACATGAGATCTGCTATGGTCATGTATGAGAAAATGCTTCTTCTTGGCTGTCTACCAGACGTGGTTACATTCACTTCCCTGATTGATGGCTATTGCCGGGAAGGTGAAGTGAATCAAGGTTTGAAGCTCTGGGAGGAGATGAAAGTAAGAAATCTGTCTCCAAATGTGTATACCTATGCTGTGCTCATCAATGCTCTCTGTAAGGAAAATAGAATACGGGAGGCAAGAAATTTTTTGAGGCACTTGAAATCGAGTGAGGTTGTTCCCAAACCATTTATATATAATCCCGTTATTGATGGGTTTTGCAAGGCTGGAAAGGTGGATGAGGCAAACTTCATAGTGGCTGAGATGCAGGAGAAGAAATGCAGGCCAGATAAAATAACATTTACCATTCTTATTATTGGCAACTGTATGAAAGGGAGGATGGTGGAGGCAATTAGCACTTTCTATAAGATGATTGAGATCAACTGTGTTCCAGATGAAATTACTATTAATTCTTTGATATCTTGCCTTCTGAAGGCTGGAATGCCTAATGAAGCCTCTCAAATCAAACAAGCTGCTTTACAGAAGCTCAACTTGGGTTTGTCATCGTTAGGAAGCCCGCTTACAAGAAAATCTTCACGTGTGCCAGTTGCTGTTTGGTGA2004006008001000120014001600Expect = 1.5E-9 / Score = 35.4Expect = 1.6E-7 / Score = 29.1Expect = 5.4E-12 / Score = 43.1Expect = 3.5E-8 / Score = 31.1Expect = 4.8E-10 / Score = 37.0Expect = 1.1E-5 / Score = 23.3Expect = 6.7E-9 / Score = 33.4Expect = 0.001 / Score = 17.1Expect = 0.013 / Score = 15.7Expect = 0.41 / Score = 11.0Expect = 0.015 / Score = 15.5Expect = 0.15 / Score = 12.3Expect = 5.3E-16 / Score = 58.6Expect = 4.6E-19 / Score = 68.4Expect = 2.9E-20 / Score = 72.2Expect = 7.8E-13 / Score = 48.4Score = 14.699161Score = 12.024604Score = 13.493418Score = 9.909073Score = 11.783455Score = 9.744654Score = 11.509422Score = 8.889672Score = 11.465577Score = 13.054966Expect = 4.0E-9 / Score = 38.2Expect = 1.8E-16 / Score = 62.2Expect = 9.0E-23 / Score = 82.8Expect = 1.4E-21 / Score = 78.9Expect = 1.4E-19 / Score = 72.4Expect = 1.1E-15 / Score = 59.6Score = Score = Score = SequenceTIGR00756PF01535PF13041PS51375PS51375PS51375PS51375PS51375PS51375PS51375PS51375PS51375PS51375G3DSA:1.25.40.10PTHR47941:SF1PTHR47941SSF81901
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 391..423
e-value: 1.1E-5
score: 23.3
coord: 427..459
e-value: 6.7E-9
score: 33.4
coord: 250..285
e-value: 1.6E-7
score: 29.1
coord: 461..495
e-value: 0.001
score: 17.1
coord: 286..319
e-value: 5.4E-12
score: 43.1
coord: 356..390
e-value: 4.8E-10
score: 37.0
coord: 321..355
e-value: 3.5E-8
score: 31.1
coord: 215..249
e-value: 1.5E-9
score: 35.4
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 497..516
e-value: 0.15
score: 12.3
coord: 150..175
e-value: 0.41
score: 11.0
coord: 111..140
e-value: 0.013
score: 15.7
coord: 181..204
e-value: 0.015
score: 15.5
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 212..261
e-value: 5.3E-16
score: 58.6
coord: 353..402
e-value: 2.9E-20
score: 72.2
coord: 426..471
e-value: 7.8E-13
score: 48.4
coord: 283..331
e-value: 4.6E-19
score: 68.4
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 284..318
score: 14.699161
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 424..458
score: 12.024604
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 354..388
score: 13.493418
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 108..142
score: 9.909073
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 248..283
score: 11.783455
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 459..493
score: 9.744654
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 389..423
score: 11.509422
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 178..212
score: 8.889672
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 319..353
score: 11.465577
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 213..247
score: 13.054966
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 242..312
e-value: 9.0E-23
score: 82.8
coord: 174..241
e-value: 1.8E-16
score: 62.2
coord: 384..451
e-value: 1.4E-19
score: 72.4
coord: 63..173
e-value: 4.0E-9
score: 38.2
coord: 452..523
e-value: 1.1E-15
score: 59.6
coord: 313..383
e-value: 1.4E-21
score: 78.9
NoneNo IPR availablePANTHERPTHR47941:SF1OSJNBA0027P08.18 PROTEINcoord: 15..547
NoneNo IPR availablePANTHERPTHR47941PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 3, MITOCHONDRIALcoord: 15..547
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 154..347