CsaV3_2G001150.1 (mRNA) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_2G001150.1
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Pentatricopeptide repeat-containing protein
Location	chr2: 238059 .. 241498 (-)
Sequence length	1647
RNA-Seq Expression	CsaV3_2G001150.1
Synteny	CsaV3_2G001150.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGCTCACAAATACAATGGCCTTGATCTTCAGCTCCTCGGCCCGAAGAAAAACCACACAAGACTTTTGAGAAAACATTAAACAAAGTAAAACGGAAAACCCTAAACGCAGGAACCCAGGGAGTCGTTGATTCATCCGATTCGCAGCCGTCTTCACTCTTTCAAGGTCCAGATATTTTGATGGAGTTCTCGTAGTATCATCTTGCGGGCCGCACATTGATTGGAACTCTGAGTTCCTTACTCGGTTGCGAGTTTTCCTTCTTTTGCGAATAGGCAACTTTCATCAACCAGCATTTTGTTGTCAACAGTGTTATGGCATCAGAGCTTCGTTCGATCTCAGGTTTATTGTCTTGAATAAAATGATGGATTTCTTATTATTTATGCGAGTTAGACTGGACATTTAATTCATTTCATGAATATTAGAGAGCCTGACACACAATCTGAGAGACCTACTGGGTGTAAACAGGAAAGAATTGTGATTGAGAATATATGGGAAGATAGAGCAGAGCCCAACGATGGCGTGGGGCTGCAGATGACCCTCTTATTCTTCTCTAGCCGTGCCTACAGGCTTCGAACCTCCAACTTCTCCATTGCTCAGTTTTATAGCCTTGCAGATTCAGTATCACGCGCTCGGCCTTTTTGTGATAGAGAGATAATACGACACTCGGAGGCTTGGCTAGTGAAGGTTGTTTGCACTCTCTTTTTTCGATCGCATTCCCTGAATGCTTGTTTTGGTTATCTAAGTAGAAACTTGAACCCTTCAATCGCTTTTGAGGTTATTAAGAGGTTTAGTGATCCCTTATTGGGTTTGAAGTTTTTTGAGTTTAGTAGAACACACCTGAGCATTAACCATACCTTTAATACCTATGATTTGCTCATGAGGAATCTCTGTAAAGTGGGTCTCAACGATTCTGCAAAAATTGTTTTTGATTGCATGAGGAGTGACGGGATTTTGCCGGATAGTTCCATTTTAGAACTCTTGGTGTCTTCATACGCTCGAATGGGGAAGTTAGATTCTGCCAAAAATTTTCTTAATGAAGTTCACTGTTATGGTATTAAAGTTAGTCCTTTTGTGTATAATAACTTGTTGAATATGTTGGTCAAGCAGAACCTAGTAGATGAAGCTGTCTTACTATTCAGGGAGCACTTGGAACCATATTTCGTTCCAGATGTTTACAGCTTCAATATTTTAATTAGAGGATTGTGCAGAATAGGAGAAATTGATAAGGCTTTTGAGTTTTTCCAGAATATGGGAAATTTTGGTTGCTTTCCTGATATTGTTTCGTATAATACGCTTATAAATGGGTTTTGTAGGGTCAATGAGATTAGTAAAGGGCATGATTTGCTAAAAGAAGATATGTTAATAAAAGGGGTTTCCCCAGATGTTATAACCTATACATCGATTATATCAGGCTATTGCAAATTGGGTGATATGAAGGCAGCTTCTGAGCTTTTTGACGAGATGGTTAGTTCTGGAATCAAACCCAACGACTTCACTTTCAATGTCCTCATTGATGGTTTTGGCAAGGTTGGAAACATGAGATCTGCTATGGTCATGTATGAGAAAATGCTTCTTCTTGGCTGTCTACCAGACGTGGTTACATTCACTTCCCTGATTGATGGCTATTGCCGGGAAGGTGAAGTGAATCAAGGTTTGAAGCTCTGGGAGGAGATGAAAGTAAGAAATCTGTCTCCAAATGTGTATACCTATGCTGTGCTCATCAATGCTCTCTGTAAGGAAAATAGAATACGGGAGGCAAGAAATTTTTTGAGGCACTTGAAATCGAGTGAGGTTGTTCCCAAACCATTTATATATAATCCCGTTATTGATGGGTTTTGCAAGGCTGGAAAGGTGGATGAGGCAAACTTCATAGTGGCTGAGATGCAGGAGAAGAAATGCAGGCCAGATAAAATAACATTTACCATTCTTATTATTGGCAACTGTATGAAAGGGAGGATGGTGGAGGCAATTAGCACTTTCTATAAGATGATTGAGATCAACTGTGTTCCAGATGAAATTACTATTAATTCTTTGATATCTTGCCTTCTGAAGGCTGGAATGCCTAATGAAGCCTCTCAAATCAAACAAGCTGCTTTACAGAAGCTCAACTTGGGTTTGTCATCGTTAGGAAGCCCGCTTACAAGAAAATCTTCACGTGTGCCAGTTGCTGTTTGGTGAGGTCTATTGTGTAGTGGACTAAGAATTTTCGGCCTGCAACTATTTGGAAGTGTTCGCCTGTTCTGTGCCAGATTACAAAATAAGCAAGTGAAGGATGAGACAAGTTGACTACTAATAGACGGTTAGGACATTTACACTGATTCTAGTTTCTCAAGGCTGAATAGTATCTATGGTAGTAAAGTACTACCTACTGGCCATATCAACTTCTATGCTGTTGTGAGGTGCCTGTTATTCGGAATAGAAATGTTTTACCGAAAATGTTTCTTTTTTTTTTTTTTGGGGGGGGGGGGGGGGGGATCATAGGTTAAAATTATCAAGATTCTTCTTTCATTTCATTACTGTTGCCATCCGAATTTTTAATGTTTCTGTTGCACTGCAGGCCAGTACTAGTTCGAGTTCTCACGTAAAGGGTTTAAAGCTCGCTGTCTGAATCCCAGCCACAATGATTACCATACTATTTCATGCTGGTCATAGGCCAAACCTTTGGAGTTCTGATTGAAAACCAATCGAAGAGGGAGTTGTGCTGAAGCCGGTTTGGATACGTTAGTGAGGGGAAGACCATTAGGCCATATTCTTCGTGGGATTGATGGCATTTGTTCTCGGACGTTATTATTGTTACCATTGGCGGTGATTCAGTGAAGAAACGGAGACGAGCTTAGATCAAGCGATTAGTTTTGGTCATGTACAGGCCTTTTCAAATTAACATAAAATAAATGCAAGGATTATCATATTTCTTGAGTTGACTTGATTCAGCTTGAGTGGAATACCCTGCTGTTATGTAAACTTTAATTATAGCATAACAATTCTGTGGTCGTGTCTGGTGCAGTAATTATGAATTCGTGTCTGAAACTGATGGATTGATTCAACATGTTATGTGGATTTGTGGAATTTCTAGACCTGAACGATCTAGAATTAACATGGATGAAAGTAAAAGTTGAAGCCAATGTGGTAGCGAATACTTATGCTTAATATAATAAACAGTCAAGAGGCTGGGTTTCTTTTGTTGACCATGGTGGCTTCTGTCGCCGTTTGAGACCGTCTTCAGTAAGTGGCCAACTCAAACGCGTTAACCTTGTCTATCAAATTACAAATTAATAATCTATTAATCGTTAATTTAAAAGCTACAAAAATGGGATAAGTCAAGTAAGTTTGGCGAGCAGCACTGTTTAACTTAATACATTGTATACTAAATTATTTTTTTCTGAAGTCTTTGTTGTATTAATTTTACACCTTTCTTTACATTAAAATAAAAATTTGTGTCAG

mRNA sequence

ATGACCCTCTTATTCTTCTCTAGCCGTGCCTACAGGCTTCGAACCTCCAACTTCTCCATTGCTCAGTTTTATAGCCTTGCAGATTCAGTATCACGCGCTCGGCCTTTTTGTGATAGAGAGATAATACGACACTCGGAGGCTTGGCTAGTGAAGGTTGTTTGCACTCTCTTTTTTCGATCGCATTCCCTGAATGCTTGTTTTGGTTATCTAAGTAGAAACTTGAACCCTTCAATCGCTTTTGAGGTTATTAAGAGGTTTAGTGATCCCTTATTGGGTTTGAAGTTTTTTGAGTTTAGTAGAACACACCTGAGCATTAACCATACCTTTAATACCTATGATTTGCTCATGAGGAATCTCTGTAAAGTGGGTCTCAACGATTCTGCAAAAATTGTTTTTGATTGCATGAGGAGTGACGGGATTTTGCCGGATAGTTCCATTTTAGAACTCTTGGTGTCTTCATACGCTCGAATGGGGAAGTTAGATTCTGCCAAAAATTTTCTTAATGAAGTTCACTGTTATGGTATTAAAGTTAGTCCTTTTGTGTATAATAACTTGTTGAATATGTTGGTCAAGCAGAACCTAGTAGATGAAGCTGTCTTACTATTCAGGGAGCACTTGGAACCATATTTCGTTCCAGATGTTTACAGCTTCAATATTTTAATTAGAGGATTGTGCAGAATAGGAGAAATTGATAAGGCTTTTGAGTTTTTCCAGAATATGGGAAATTTTGGTTGCTTTCCTGATATTGTTTCGTATAATACGCTTATAAATGGGTTTTGTAGGGTCAATGAGATTAGTAAAGGGCATGATTTGCTAAAAGAAGATATGTTAATAAAAGGGGTTTCCCCAGATGTTATAACCTATACATCGATTATATCAGGCTATTGCAAATTGGGTGATATGAAGGCAGCTTCTGAGCTTTTTGACGAGATGGTTAGTTCTGGAATCAAACCCAACGACTTCACTTTCAATGTCCTCATTGATGGTTTTGGCAAGGTTGGAAACATGAGATCTGCTATGGTCATGTATGAGAAAATGCTTCTTCTTGGCTGTCTACCAGACGTGGTTACATTCACTTCCCTGATTGATGGCTATTGCCGGGAAGGTGAAGTGAATCAAGGTTTGAAGCTCTGGGAGGAGATGAAAGTAAGAAATCTGTCTCCAAATGTGTATACCTATGCTGTGCTCATCAATGCTCTCTGTAAGGAAAATAGAATACGGGAGGCAAGAAATTTTTTGAGGCACTTGAAATCGAGTGAGGTTGTTCCCAAACCATTTATATATAATCCCGTTATTGATGGGTTTTGCAAGGCTGGAAAGGTGGATGAGGCAAACTTCATAGTGGCTGAGATGCAGGAGAAGAAATGCAGGCCAGATAAAATAACATTTACCATTCTTATTATTGGCAACTGTATGAAAGGGAGGATGGTGGAGGCAATTAGCACTTTCTATAAGATGATTGAGATCAACTGTGTTCCAGATGAAATTACTATTAATTCTTTGATATCTTGCCTTCTGAAGGCTGGAATGCCTAATGAAGCCTCTCAAATCAAACAAGCTGCTTTACAGAAGCTCAACTTGGGTTTGTCATCGTTAGGAAGCCCGCTTACAAGAAAATCTTCACGTGTGCCAGTTGCTGTTTGGTGA

Coding sequence (CDS)

ATGACCCTCTTATTCTTCTCTAGCCGTGCCTACAGGCTTCGAACCTCCAACTTCTCCATTGCTCAGTTTTATAGCCTTGCAGATTCAGTATCACGCGCTCGGCCTTTTTGTGATAGAGAGATAATACGACACTCGGAGGCTTGGCTAGTGAAGGTTGTTTGCACTCTCTTTTTTCGATCGCATTCCCTGAATGCTTGTTTTGGTTATCTAAGTAGAAACTTGAACCCTTCAATCGCTTTTGAGGTTATTAAGAGGTTTAGTGATCCCTTATTGGGTTTGAAGTTTTTTGAGTTTAGTAGAACACACCTGAGCATTAACCATACCTTTAATACCTATGATTTGCTCATGAGGAATCTCTGTAAAGTGGGTCTCAACGATTCTGCAAAAATTGTTTTTGATTGCATGAGGAGTGACGGGATTTTGCCGGATAGTTCCATTTTAGAACTCTTGGTGTCTTCATACGCTCGAATGGGGAAGTTAGATTCTGCCAAAAATTTTCTTAATGAAGTTCACTGTTATGGTATTAAAGTTAGTCCTTTTGTGTATAATAACTTGTTGAATATGTTGGTCAAGCAGAACCTAGTAGATGAAGCTGTCTTACTATTCAGGGAGCACTTGGAACCATATTTCGTTCCAGATGTTTACAGCTTCAATATTTTAATTAGAGGATTGTGCAGAATAGGAGAAATTGATAAGGCTTTTGAGTTTTTCCAGAATATGGGAAATTTTGGTTGCTTTCCTGATATTGTTTCGTATAATACGCTTATAAATGGGTTTTGTAGGGTCAATGAGATTAGTAAAGGGCATGATTTGCTAAAAGAAGATATGTTAATAAAAGGGGTTTCCCCAGATGTTATAACCTATACATCGATTATATCAGGCTATTGCAAATTGGGTGATATGAAGGCAGCTTCTGAGCTTTTTGACGAGATGGTTAGTTCTGGAATCAAACCCAACGACTTCACTTTCAATGTCCTCATTGATGGTTTTGGCAAGGTTGGAAACATGAGATCTGCTATGGTCATGTATGAGAAAATGCTTCTTCTTGGCTGTCTACCAGACGTGGTTACATTCACTTCCCTGATTGATGGCTATTGCCGGGAAGGTGAAGTGAATCAAGGTTTGAAGCTCTGGGAGGAGATGAAAGTAAGAAATCTGTCTCCAAATGTGTATACCTATGCTGTGCTCATCAATGCTCTCTGTAAGGAAAATAGAATACGGGAGGCAAGAAATTTTTTGAGGCACTTGAAATCGAGTGAGGTTGTTCCCAAACCATTTATATATAATCCCGTTATTGATGGGTTTTGCAAGGCTGGAAAGGTGGATGAGGCAAACTTCATAGTGGCTGAGATGCAGGAGAAGAAATGCAGGCCAGATAAAATAACATTTACCATTCTTATTATTGGCAACTGTATGAAAGGGAGGATGGTGGAGGCAATTAGCACTTTCTATAAGATGATTGAGATCAACTGTGTTCCAGATGAAATTACTATTAATTCTTTGATATCTTGCCTTCTGAAGGCTGGAATGCCTAATGAAGCCTCTCAAATCAAACAAGCTGCTTTACAGAAGCTCAACTTGGGTTTGTCATCGTTAGGAAGCCCGCTTACAAGAAAATCTTCACGTGTGCCAGTTGCTGTTTGGTGA

Protein sequence

MTLLFFSSRAYRLRTSNFSIAQFYSLADSVSRARPFCDREIIRHSEAWLVKVVCTLFFRSHSLNACFGYLSRNLNPSIAFEVIKRFSDPLLGLKFFEFSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQKLNLGLSSLGSPLTRKSSRVPVAVW*

Homology

[Close]

BLAST of CsaV3_2G001150.1 vs. NCBI nr
Match: KAE8651488.1 (hypothetical protein Csa_019253 [Cucumis sativus])

HSP 1 Score: 1105.5 bits (2858), Expect = 0.0e+00
Identity = 548/548 (100.00%), Postives = 548/548 (100.00%), Query Frame = 0


Query: 1   MTLLFFSSRAYRLRTSNFSIAQFYSLADSVSRARPFCDREIIRHSEAWLVKVVCTLFFRS 60
           MTLLFFSSRAYRLRTSNFSIAQFYSLADSVSRARPFCDREIIRHSEAWLVKVVCTLFFRS
Sbjct: 1   MTLLFFSSRAYRLRTSNFSIAQFYSLADSVSRARPFCDREIIRHSEAWLVKVVCTLFFRS 60

Query: 61  HSLNACFGYLSRNLNPSIAFEVIKRFSDPLLGLKFFEFSRTHLSINHTFNTYDLLMRNLC 120
           HSLNACFGYLSRNLNPSIAFEVIKRFSDPLLGLKFFEFSRTHLSINHTFNTYDLLMRNLC
Sbjct: 61  HSLNACFGYLSRNLNPSIAFEVIKRFSDPLLGLKFFEFSRTHLSINHTFNTYDLLMRNLC 120

Query: 121 KVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPF 180
           KVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPF
Sbjct: 121 KVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPF 180

Query: 181 VYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNM 240
           VYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNM
Sbjct: 181 VYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNM 240

Query: 241 GNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGD 300
           GNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGD
Sbjct: 241 GNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGD 300

Query: 301 MKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTS 360
           MKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTS
Sbjct: 301 MKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTS 360

Query: 361 LIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSE 420
           LIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSE
Sbjct: 361 LIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSE 420

Query: 421 VVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAI 480
           VVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAI
Sbjct: 421 VVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAI 480

Query: 481 STFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQKLNLGLSSLGSPLTRKS 540
           STFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQKLNLGLSSLGSPLTRKS
Sbjct: 481 STFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQKLNLGLSSLGSPLTRKS 540

Query: 541 SRVPVAVW 549
           SRVPVAVW
Sbjct: 541 SRVPVAVW 548

[Close]

BLAST of CsaV3_2G001150.1 vs. NCBI nr
Match: XP_008459803.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g06000 [Cucumis melo] >XP_008459808.1 PREDICTED: pentatricopeptide repeat-containing protein At2g06000 [Cucumis melo] >XP_008459817.1 PREDICTED: pentatricopeptide repeat-containing protein At2g06000 [Cucumis melo])

HSP 1 Score: 1058.9 bits (2737), Expect = 1.5e-305
Identity = 527/548 (96.17%), Postives = 534/548 (97.45%), Query Frame = 0


Query: 1   MTLLFFSSRAYRLRTSNFSIAQFYSLADSVSRARPFCDREIIRHSEAWLVKVVCTLFFRS 60
           MTLLFFSSRAYRLR SNFSI+QFYSLADSVSRARPFCDREIIR+SEAWLVKVVCTLF RS
Sbjct: 41  MTLLFFSSRAYRLRLSNFSISQFYSLADSVSRARPFCDREIIRNSEAWLVKVVCTLFSRS 100

Query: 61  HSLNACFGYLSRNLNPSIAFEVIKRFSDPLLGLKFFEFSRTHLSINHTFNTYDLLMRNLC 120
           HSLNACFGYLSRNLNPSIAFEVIKRF DPLLGLKFFEFSR HLSINHTFNTYDLLMRNLC
Sbjct: 101 HSLNACFGYLSRNLNPSIAFEVIKRFRDPLLGLKFFEFSRIHLSINHTFNTYDLLMRNLC 160

Query: 121 KVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPF 180
           KVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGK DSAKNFLNEVHCYGIKVSPF
Sbjct: 161 KVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKFDSAKNFLNEVHCYGIKVSPF 220

Query: 181 VYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNM 240
           VYNNLLNMLVKQNLVDEAV LFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNM
Sbjct: 221 VYNNLLNMLVKQNLVDEAVSLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNM 280

Query: 241 GNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGD 300
           GNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKE MLIKGVSPDVITYTSIISGYCKLGD
Sbjct: 281 GNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEVMLIKGVSPDVITYTSIISGYCKLGD 340

Query: 301 MKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTS 360
           MKAASELFDEMVSSGIKPN+FTFNVLIDGFGKVGNMRSAMVMYEKMLLLGC PDVVT TS
Sbjct: 341 MKAASELFDEMVSSGIKPNNFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCPPDVVTVTS 400

Query: 361 LIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSE 420
           LIDGYCREGEVNQGLKLWEEMK+RNLSPNVYTYAVLINALCKENRI+EARNFLRHLKSSE
Sbjct: 401 LIDGYCREGEVNQGLKLWEEMKLRNLSPNVYTYAVLINALCKENRIQEARNFLRHLKSSE 460

Query: 421 VVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAI 480
           VVPKPFIYNPVID FCKAG+VDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAI
Sbjct: 461 VVPKPFIYNPVIDRFCKAGQVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAI 520

Query: 481 STFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQKLNLGLSSLGSPLTRKS 540
           STFYKMIEINC+PDEITINSLISCLLKAGMPNEASQIKQAALQKLNLG  SLGS LTRKS
Sbjct: 521 STFYKMIEINCIPDEITINSLISCLLKAGMPNEASQIKQAALQKLNLGSLSLGSLLTRKS 580

Query: 541 SRVPVAVW 549
           S VPVAVW
Sbjct: 581 SSVPVAVW 588

[Close]

BLAST of CsaV3_2G001150.1 vs. NCBI nr
Match: KAA0061465.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK10809.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1058.1 bits (2735), Expect = 2.5e-305
Identity = 527/548 (96.17%), Postives = 534/548 (97.45%), Query Frame = 0


Query: 1   MTLLFFSSRAYRLRTSNFSIAQFYSLADSVSRARPFCDREIIRHSEAWLVKVVCTLFFRS 60
           MTLLFFSSRAYRLR SNFSI+QFYSLADSVSRARPFCDREIIR+SEAWLVKVVCTLF RS
Sbjct: 41  MTLLFFSSRAYRLRLSNFSISQFYSLADSVSRARPFCDREIIRNSEAWLVKVVCTLFSRS 100

Query: 61  HSLNACFGYLSRNLNPSIAFEVIKRFSDPLLGLKFFEFSRTHLSINHTFNTYDLLMRNLC 120
           HSLNACFGYLSRNLNPSIAFEVIKRF DPLLGLKFFEFSR HLSINHTFNTYDLLMRNLC
Sbjct: 101 HSLNACFGYLSRNLNPSIAFEVIKRFRDPLLGLKFFEFSRIHLSINHTFNTYDLLMRNLC 160

Query: 121 KVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPF 180
           KVGLNDSAKIVFDCMRSDGI PDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPF
Sbjct: 161 KVGLNDSAKIVFDCMRSDGISPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPF 220

Query: 181 VYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNM 240
           VYNNLLNMLVKQNLVDEAV LFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNM
Sbjct: 221 VYNNLLNMLVKQNLVDEAVSLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNM 280

Query: 241 GNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGD 300
           GNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKE MLIKGVSPDVITYTSIISGYCKLGD
Sbjct: 281 GNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEVMLIKGVSPDVITYTSIISGYCKLGD 340

Query: 301 MKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTS 360
           MKAASELFDEMVSSGIKPN+FTFNVLIDGFGKVGNMRSAMVMYEKMLLLGC PDVVT TS
Sbjct: 341 MKAASELFDEMVSSGIKPNNFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCPPDVVTVTS 400

Query: 361 LIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSE 420
           LIDGYCREGEVNQGLKLWEEMK+RNLSPNVYTYAVLINALCKENRI+EARNFLRHLKSSE
Sbjct: 401 LIDGYCREGEVNQGLKLWEEMKLRNLSPNVYTYAVLINALCKENRIQEARNFLRHLKSSE 460

Query: 421 VVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAI 480
           VVPKPFIYNPVID FCKAG+VDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAI
Sbjct: 461 VVPKPFIYNPVIDRFCKAGQVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAI 520

Query: 481 STFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQKLNLGLSSLGSPLTRKS 540
           STFYKMIEINC+PDEITINSLISCLLKAGMPNEASQIKQAALQKLNLG  SLGS LTRKS
Sbjct: 521 STFYKMIEINCIPDEITINSLISCLLKAGMPNEASQIKQAALQKLNLGSLSLGSLLTRKS 580

Query: 541 SRVPVAVW 549
           S VPVAVW
Sbjct: 581 SSVPVAVW 588

[Close]

BLAST of CsaV3_2G001150.1 vs. NCBI nr
Match: XP_038890050.1 (pentatricopeptide repeat-containing protein At2g06000 [Benincasa hispida])

HSP 1 Score: 1023.8 bits (2646), Expect = 5.3e-295
Identity = 503/547 (91.96%), Postives = 526/547 (96.16%), Query Frame = 0


Query: 1   MTLLFFSSRAYRLRTSNFSIAQFYSLADSVSRARPFCDREIIRHSEAWLVKVVCTLFFRS 60
           MTLLFFSSR YR R SNFSIAQFYSLAD VSRARPFCDRE++R+ E WLVKVVCTLFFRS
Sbjct: 48  MTLLFFSSRTYRFRASNFSIAQFYSLADGVSRARPFCDREVLRNPETWLVKVVCTLFFRS 107

Query: 61  HSLNACFGYLSRNLNPSIAFEVIKRFSDPLLGLKFFEFSRTHLSINHTFNTYDLLMRNLC 120
            SLNACFGYLSRNLNPSIAFEVIKRF DPLLGLKFFEFSRTHLSI HTFNTYDLL+RNLC
Sbjct: 108 ISLNACFGYLSRNLNPSIAFEVIKRFRDPLLGLKFFEFSRTHLSIKHTFNTYDLLVRNLC 167

Query: 121 KVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPF 180
           ++GLNDSAKIVFDCMRSDGILPDSSI+EL+VSSYA+MGKLDSAKNFLNEVH YGIKVSPF
Sbjct: 168 QMGLNDSAKIVFDCMRSDGILPDSSIVELMVSSYAQMGKLDSAKNFLNEVHRYGIKVSPF 227

Query: 181 VYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNM 240
           VYNNLLNMLVKQNLVDEAVLLFREHLEPY VPDVYSFNILIRGLCRIG+IDKAFEFFQNM
Sbjct: 228 VYNNLLNMLVKQNLVDEAVLLFREHLEPYLVPDVYSFNILIRGLCRIGKIDKAFEFFQNM 287

Query: 241 GNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGD 300
           GNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKE + IKGVSPDV+TYTS+ISGYCKLGD
Sbjct: 288 GNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEVLSIKGVSPDVVTYTSLISGYCKLGD 347

Query: 301 MKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTS 360
           MKAAS+LFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSA+VMYEKMLLLGC PDVVT TS
Sbjct: 348 MKAASDLFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSALVMYEKMLLLGCPPDVVTVTS 407

Query: 361 LIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSE 420
           LIDGYCR GEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRI+EAR+FLRHLK SE
Sbjct: 408 LIDGYCRAGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIQEARSFLRHLKVSE 467

Query: 421 VVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAI 480
           VVPKPFIYNPVIDGFCKAGKVDEAN IVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAI
Sbjct: 468 VVPKPFIYNPVIDGFCKAGKVDEANVIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAI 527

Query: 481 STFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQKLNLGLSSLGSPLTRKS 540
           STFYKM+E+NC+PDEITINSLISCLLKAGMPNEASQIKQAA++ LNLGL SLGSPLT+KS
Sbjct: 528 STFYKMLEVNCIPDEITINSLISCLLKAGMPNEASQIKQAAVENLNLGLLSLGSPLTKKS 587

Query: 541 SRVPVAV 548
           S VPVAV
Sbjct: 588 SCVPVAV 594

[Close]

BLAST of CsaV3_2G001150.1 vs. NCBI nr
Match: XP_031736975.1 (pentatricopeptide repeat-containing protein At2g06000 [Cucumis sativus])

HSP 1 Score: 1019.6 bits (2635), Expect = 1.0e-293
Identity = 515/548 (93.98%), Postives = 515/548 (93.98%), Query Frame = 0


Query: 1   MTLLFFSSRAYRLRTSNFSIAQFYSLADSVSRARPFCDREIIRHSEAWLVKVVCTLFFRS 60
           MTLLFFSSRAYRLRTSNFSIAQFYSLADSVSRARPFCDRE                    
Sbjct: 41  MTLLFFSSRAYRLRTSNFSIAQFYSLADSVSRARPFCDRE-------------------- 100

Query: 61  HSLNACFGYLSRNLNPSIAFEVIKRFSDPLLGLKFFEFSRTHLSINHTFNTYDLLMRNLC 120
                        LNPSIAFEVIKRFSDPLLGLKFFEFSRTHLSINHTFNTYDLLMRNLC
Sbjct: 101 -------------LNPSIAFEVIKRFSDPLLGLKFFEFSRTHLSINHTFNTYDLLMRNLC 160

Query: 121 KVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPF 180
           KVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPF
Sbjct: 161 KVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPF 220

Query: 181 VYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNM 240
           VYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNM
Sbjct: 221 VYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNM 280

Query: 241 GNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGD 300
           GNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGD
Sbjct: 281 GNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGD 340

Query: 301 MKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTS 360
           MKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTS
Sbjct: 341 MKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTS 400

Query: 361 LIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSE 420
           LIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSE
Sbjct: 401 LIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSE 460

Query: 421 VVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAI 480
           VVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAI
Sbjct: 461 VVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAI 520

Query: 481 STFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQKLNLGLSSLGSPLTRKS 540
           STFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQKLNLGLSSLGSPLTRKS
Sbjct: 521 STFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQKLNLGLSSLGSPLTRKS 555

Query: 541 SRVPVAVW 549
           SRVPVAVW
Sbjct: 581 SRVPVAVW 555

[Close]

BLAST of CsaV3_2G001150.1 vs. ExPASy Swiss-Prot
Match: Q9ZUE9 (Pentatricopeptide repeat-containing protein At2g06000 OS=Arabidopsis thaliana OX=3702 GN=At2g06000 PE=2 SV=1)

HSP 1 Score: 560.8 bits (1444), Expect = 1.7e-158
Identity = 283/532 (53.20%), Postives = 379/532 (71.24%), Query Frame = 0


Query: 19  SIAQFYSLADSVSRARPFCD--REIIRHSEAWLVKVVCTLF-FRSHSLNACFGYLSRNLN 78
           +IA F++ +   ++ARP  +  RE+I   EAWLVK+V TLF +R    + CF YLS+NLN
Sbjct: 9   AIAHFHTHSHGGAQARPLQNNTREVIHCPEAWLVKIVSTLFVYRVPDSDLCFCYLSKNLN 68

Query: 79  PSIAFEVIKRF-SDPLLGLKFFEFSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDC 138
           P I+FEV+K+  ++P +G +F+EFSR  L+I H+F TY+LL R+LCK GL+D A  +F+C
Sbjct: 69  PFISFEVVKKLDNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFEC 128

Query: 139 MRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNL 198
           M+SDG+ P++ +L  LVSS+A  GKL  A   L  +  + ++    V N+LLN LVK + 
Sbjct: 129 MKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL--LQSFEVEGCCMVVNSLLNTLVKLDR 188

Query: 199 VDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNT 258
           V++A+ LF EHL      D  +FNILIRGLC +G+ +KA E    M  FGC PDIV+YNT
Sbjct: 189 VEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNT 248

Query: 259 LINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSS 318
           LI GFC+ NE++K  ++ K+       SPDV+TYTS+ISGYCK G M+ AS L D+M+  
Sbjct: 249 LIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRL 308

Query: 319 GIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQG 378
           GI P + TFNVL+DG+ K G M +A  +  KM+  GC PDVVTFTSLIDGYCR G+V+QG
Sbjct: 309 GIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQG 368

Query: 379 LKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDG 438
            +LWEEM  R + PN +TY++LINALC ENR+ +AR  L  L S +++P+PF+YNPVIDG
Sbjct: 369 FRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDG 428

Query: 439 FCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPD 498
           FCKAGKV+EAN IV EM++KKC+PDKITFTILIIG+CMKGRM EA+S F+KM+ I C PD
Sbjct: 429 FCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPD 488

Query: 499 EITINSLISCLLKAGMPNEASQIKQAALQKLNLGLSSLGSPLTRKSSRVPVA 547
           +IT++SL+SCLLKAGM  EA  + Q A +    G S+   PL  K++   +A
Sbjct: 489 KITVSSLLSCLLKAGMAKEAYHLNQIARK----GQSNNVVPLETKTANATLA 534

[Close]

BLAST of CsaV3_2G001150.1 vs. ExPASy Swiss-Prot
Match: Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 1.0e-70
Identity = 152/474 (32.07%), Postives = 255/474 (53.80%), Query Frame = 0


Query: 69  YLSRNLNPSIAFE-VIKRFSDPLLGLKFFEFSRTH--------------LSINHTFNTYD 128
           +LS N  P  A   ++K  +D  L LKF  ++  H              L+    + T  
Sbjct: 41  HLSANFTPEAASNLLLKSQNDQALILKFLNWANPHQFFTLRCKCITLHILTKFKLYKTAQ 100

Query: 129 LLMRNLCKVGLNDS-AKIVFDCMRS--DGILPDSSILELLVSSYARMGKLDSAKNFLNEV 188
           +L  ++    L+D  A +VF  ++   D     SS+ +L+V SY+R+  +D A + ++  
Sbjct: 101 ILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLA 160

Query: 189 HCYGIKVSPFVYNNLLNMLVK-QNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGE 248
             +G       YN +L+  ++ +  +  A  +F+E LE    P+V+++NILIRG C  G 
Sbjct: 161 QAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGN 220

Query: 249 IDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYT 308
           ID A   F  M   GC P++V+YNTLI+G+C++ +I  G  LL+  M +KG+ P++I+Y 
Sbjct: 221 IDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLR-SMALKGLEPNLISYN 280

Query: 309 SIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLL 368
            +I+G C+ G MK  S +  EM   G   ++ T+N LI G+ K GN   A+VM+ +ML  
Sbjct: 281 VVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRH 340

Query: 369 GCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREA 428
           G  P V+T+TSLI   C+ G +N+ ++  ++M+VR L PN  TY  L++   ++  + EA
Sbjct: 341 GLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEA 400

Query: 429 RNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIG 488
              LR +  +   P    YN +I+G C  GK+++A  ++ +M+EK   PD ++++ ++ G
Sbjct: 401 YRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSG 460

Query: 489 NCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQ 524
            C    + EA+    +M+E    PD IT +SLI    +     EA  + +  L+
Sbjct: 461 FCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLR 513

[Close]

BLAST of CsaV3_2G001150.1 vs. ExPASy Swiss-Prot
Match: Q9LSL9 (Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana OX=3702 GN=At5g65560 PE=2 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.4e-64
Identity = 144/399 (36.09%), Postives = 214/399 (53.63%), Query Frame = 0


Query: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEV 170
           TY+ ++   CK+G  + A      +   G+ PD      L+  Y +   LDSA    NE+
Sbjct: 220 TYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEM 279

Query: 171 HCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEI 230
              G + +   Y +L++ L     +DEA+ LF +  +    P V ++ +LI+ LC     
Sbjct: 280 PLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERK 339

Query: 231 DKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTS 290
            +A    + M   G  P+I +Y  LI+  C   +  K  +LL + ML KG+ P+VITY +
Sbjct: 340 SEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQ-MLEKGLMPNVITYNA 399

Query: 291 IISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLG 350
           +I+GYCK G ++ A ++ + M S  + PN  T+N LI G+ K  N+  AM +  KML   
Sbjct: 400 LINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERK 459

Query: 351 CLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREAR 410
            LPDVVT+ SLIDG CR G  +   +L   M  R L P+ +TY  +I++LCK  R+ EA 
Sbjct: 460 VLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEAC 519

Query: 411 NFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGN 470
           +    L+   V P   +Y  +IDG+CKAGKVDEA+ ++ +M  K C P+ +TF  LI G 
Sbjct: 520 DLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGL 579

Query: 471 CMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAG 510
           C  G++ EA     KM++I   P   T   LI  LLK G
Sbjct: 580 CADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDG 616

[Close]

BLAST of CsaV3_2G001150.1 vs. ExPASy Swiss-Prot
Match: Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 1.3e-62
Identity = 137/436 (31.42%), Postives = 231/436 (52.98%), Query Frame = 0


Query: 93  LKFFEFSRTHLS---INHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILEL 152
           LK  E S   +S   I    +T+++L++ LC+      A ++ + M S G++PD      
Sbjct: 170 LKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTT 229

Query: 153 LVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFRE-HLEP 212
           ++  Y   G LD A     ++  +G   S    N +++   K+  V++A+   +E   + 
Sbjct: 230 VMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQD 289

Query: 213 YFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKG 272
            F PD Y+FN L+ GLC+ G +  A E    M   G  PD+ +YN++I+G C++ E+ + 
Sbjct: 290 GFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEA 349

Query: 273 HDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLID 332
            ++L + M+ +  SP+ +TY ++IS  CK   ++ A+EL   + S GI P+  TFN LI 
Sbjct: 350 VEVL-DQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQ 409

Query: 333 GFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSP 392
           G     N R AM ++E+M   GC PD  T+  LID  C +G++++ L + ++M++   + 
Sbjct: 410 GLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCAR 469

Query: 393 NVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIV 452
           +V TY  LI+  CK N+ REA      ++   V      YN +IDG CK+ +V++A  ++
Sbjct: 470 SVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLM 529

Query: 453 AEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKA 512
            +M  +  +PDK T+  L+   C  G + +A      M    C PD +T  +LIS L KA
Sbjct: 530 DQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKA 589

Query: 513 GMPNEASQIKQAALQK 525
           G    AS++ ++   K
Sbjct: 590 GRVEVASKLLRSIQMK 604

[Close]

BLAST of CsaV3_2G001150.1 vs. ExPASy Swiss-Prot
Match: Q6NQ83 (Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22470 PE=1 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 7.9e-60
Identity = 121/392 (30.87%), Postives = 210/392 (53.57%), Query Frame = 0


Query: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEV 170
           T   L+  LC  G    A ++ D M   G  PD      +++   + G    A +   ++
Sbjct: 177 TVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKM 236

Query: 171 HCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEI 230
               IK S   Y+ +++ L K    D+A+ LF E        DV +++ LI GLC  G+ 
Sbjct: 237 EERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKW 296

Query: 231 DKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTS 290
           D   +  + M      PD+V+++ LI+ F +  ++ +  +L  E M+ +G++PD ITY S
Sbjct: 297 DDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNE-MITRGIAPDTITYNS 356

Query: 291 IISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLG 350
           +I G+CK   +  A+++FD MVS G +P+  T+++LI+ + K   +   M ++ ++   G
Sbjct: 357 LIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKG 416

Query: 351 CLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREAR 410
            +P+ +T+ +L+ G+C+ G++N   +L++EM  R + P+V TY +L++ LC    + +A 
Sbjct: 417 LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKAL 476

Query: 411 NFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGN 470
                ++ S +     IYN +I G C A KVD+A  +   + +K  +PD +T+ ++I G 
Sbjct: 477 EIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGL 536

Query: 471 CMKGRMVEAISTFYKMIEINCVPDEITINSLI 503
           C KG + EA   F KM E  C PD+ T N LI
Sbjct: 537 CKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567

[Close]

BLAST of CsaV3_2G001150.1 vs. ExPASy TrEMBL
Match: A0A1S3CB42 (pentatricopeptide repeat-containing protein At2g06000 OS=Cucumis melo OX=3656 GN=LOC103498823 PE=4 SV=1)

HSP 1 Score: 1058.9 bits (2737), Expect = 7.2e-306
Identity = 527/548 (96.17%), Postives = 534/548 (97.45%), Query Frame = 0


Query: 1   MTLLFFSSRAYRLRTSNFSIAQFYSLADSVSRARPFCDREIIRHSEAWLVKVVCTLFFRS 60
           MTLLFFSSRAYRLR SNFSI+QFYSLADSVSRARPFCDREIIR+SEAWLVKVVCTLF RS
Sbjct: 41  MTLLFFSSRAYRLRLSNFSISQFYSLADSVSRARPFCDREIIRNSEAWLVKVVCTLFSRS 100

Query: 61  HSLNACFGYLSRNLNPSIAFEVIKRFSDPLLGLKFFEFSRTHLSINHTFNTYDLLMRNLC 120
           HSLNACFGYLSRNLNPSIAFEVIKRF DPLLGLKFFEFSR HLSINHTFNTYDLLMRNLC
Sbjct: 101 HSLNACFGYLSRNLNPSIAFEVIKRFRDPLLGLKFFEFSRIHLSINHTFNTYDLLMRNLC 160

Query: 121 KVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPF 180
           KVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGK DSAKNFLNEVHCYGIKVSPF
Sbjct: 161 KVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKFDSAKNFLNEVHCYGIKVSPF 220

Query: 181 VYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNM 240
           VYNNLLNMLVKQNLVDEAV LFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNM
Sbjct: 221 VYNNLLNMLVKQNLVDEAVSLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNM 280

Query: 241 GNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGD 300
           GNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKE MLIKGVSPDVITYTSIISGYCKLGD
Sbjct: 281 GNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEVMLIKGVSPDVITYTSIISGYCKLGD 340

Query: 301 MKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTS 360
           MKAASELFDEMVSSGIKPN+FTFNVLIDGFGKVGNMRSAMVMYEKMLLLGC PDVVT TS
Sbjct: 341 MKAASELFDEMVSSGIKPNNFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCPPDVVTVTS 400

Query: 361 LIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSE 420
           LIDGYCREGEVNQGLKLWEEMK+RNLSPNVYTYAVLINALCKENRI+EARNFLRHLKSSE
Sbjct: 401 LIDGYCREGEVNQGLKLWEEMKLRNLSPNVYTYAVLINALCKENRIQEARNFLRHLKSSE 460

Query: 421 VVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAI 480
           VVPKPFIYNPVID FCKAG+VDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAI
Sbjct: 461 VVPKPFIYNPVIDRFCKAGQVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAI 520

Query: 481 STFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQKLNLGLSSLGSPLTRKS 540
           STFYKMIEINC+PDEITINSLISCLLKAGMPNEASQIKQAALQKLNLG  SLGS LTRKS
Sbjct: 521 STFYKMIEINCIPDEITINSLISCLLKAGMPNEASQIKQAALQKLNLGSLSLGSLLTRKS 580

Query: 541 SRVPVAVW 549
           S VPVAVW
Sbjct: 581 SSVPVAVW 588

[Close]

BLAST of CsaV3_2G001150.1 vs. ExPASy TrEMBL
Match: A0A5A7V6K1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G001250 PE=4 SV=1)

HSP 1 Score: 1058.1 bits (2735), Expect = 1.2e-305
Identity = 527/548 (96.17%), Postives = 534/548 (97.45%), Query Frame = 0


Query: 1   MTLLFFSSRAYRLRTSNFSIAQFYSLADSVSRARPFCDREIIRHSEAWLVKVVCTLFFRS 60
           MTLLFFSSRAYRLR SNFSI+QFYSLADSVSRARPFCDREIIR+SEAWLVKVVCTLF RS
Sbjct: 41  MTLLFFSSRAYRLRLSNFSISQFYSLADSVSRARPFCDREIIRNSEAWLVKVVCTLFSRS 100

Query: 61  HSLNACFGYLSRNLNPSIAFEVIKRFSDPLLGLKFFEFSRTHLSINHTFNTYDLLMRNLC 120
           HSLNACFGYLSRNLNPSIAFEVIKRF DPLLGLKFFEFSR HLSINHTFNTYDLLMRNLC
Sbjct: 101 HSLNACFGYLSRNLNPSIAFEVIKRFRDPLLGLKFFEFSRIHLSINHTFNTYDLLMRNLC 160

Query: 121 KVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPF 180
           KVGLNDSAKIVFDCMRSDGI PDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPF
Sbjct: 161 KVGLNDSAKIVFDCMRSDGISPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPF 220

Query: 181 VYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNM 240
           VYNNLLNMLVKQNLVDEAV LFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNM
Sbjct: 221 VYNNLLNMLVKQNLVDEAVSLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNM 280

Query: 241 GNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGD 300
           GNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKE MLIKGVSPDVITYTSIISGYCKLGD
Sbjct: 281 GNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEVMLIKGVSPDVITYTSIISGYCKLGD 340

Query: 301 MKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTS 360
           MKAASELFDEMVSSGIKPN+FTFNVLIDGFGKVGNMRSAMVMYEKMLLLGC PDVVT TS
Sbjct: 341 MKAASELFDEMVSSGIKPNNFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCPPDVVTVTS 400

Query: 361 LIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSE 420
           LIDGYCREGEVNQGLKLWEEMK+RNLSPNVYTYAVLINALCKENRI+EARNFLRHLKSSE
Sbjct: 401 LIDGYCREGEVNQGLKLWEEMKLRNLSPNVYTYAVLINALCKENRIQEARNFLRHLKSSE 460

Query: 421 VVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAI 480
           VVPKPFIYNPVID FCKAG+VDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAI
Sbjct: 461 VVPKPFIYNPVIDRFCKAGQVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAI 520

Query: 481 STFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQKLNLGLSSLGSPLTRKS 540
           STFYKMIEINC+PDEITINSLISCLLKAGMPNEASQIKQAALQKLNLG  SLGS LTRKS
Sbjct: 521 STFYKMIEINCIPDEITINSLISCLLKAGMPNEASQIKQAALQKLNLGSLSLGSLLTRKS 580

Query: 541 SRVPVAVW 549
           S VPVAVW
Sbjct: 581 SSVPVAVW 588

[Close]

BLAST of CsaV3_2G001150.1 vs. ExPASy TrEMBL
Match: A0A6J1G470 (pentatricopeptide repeat-containing protein At2g06000 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111450639 PE=4 SV=1)

HSP 1 Score: 992.6 bits (2565), Expect = 6.3e-286
Identity = 484/547 (88.48%), Postives = 512/547 (93.60%), Query Frame = 0


Query: 1   MTLLFFSSRAYRLRTSNFSIAQFYSLADSVSRARPFCDREIIRHSEAWLVKVVCTLFFRS 60
           MTLLFFSSRAYR R SNF IAQFYS+AD VSRARPFCDRE+IR+ EAWLVKVVCTLFFRS
Sbjct: 48  MTLLFFSSRAYRFRASNFFIAQFYSIADGVSRARPFCDREVIRNPEAWLVKVVCTLFFRS 107

Query: 61  HSLNACFGYLSRNLNPSIAFEVIKRFSDPLLGLKFFEFSRTHLSINHTFNTYDLLMRNLC 120
           HS+NACFGYLSRNLNPSIAFEVIKRF DPLLGLKFFEFSRTHLSINHTFNTYDLL+RNLC
Sbjct: 108 HSINACFGYLSRNLNPSIAFEVIKRFRDPLLGLKFFEFSRTHLSINHTFNTYDLLVRNLC 167

Query: 121 KVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPF 180
           ++GLNDSAK VFDCMR+DGILPDSSI+E+LVSSYAR+GKLD+AKNFL+E+HCYGIKVSPF
Sbjct: 168 QMGLNDSAKTVFDCMRTDGILPDSSIVEILVSSYARLGKLDAAKNFLDEIHCYGIKVSPF 227

Query: 181 VYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNM 240
           VYNN LNMLVKQN VDEAVLLFREHLEPYF PDVY+FNILIRGLCRIGE DKAFE+ QNM
Sbjct: 228 VYNNFLNMLVKQNQVDEAVLLFREHLEPYFTPDVYTFNILIRGLCRIGETDKAFEYLQNM 287

Query: 241 GNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGD 300
            NFGCFPDIVSYNTLINGFCRVNE+SKGH LLKE   IKGVSPDVITYTSIISGYCKLGD
Sbjct: 288 ENFGCFPDIVSYNTLINGFCRVNEVSKGHVLLKEVQSIKGVSPDVITYTSIISGYCKLGD 347

Query: 301 MKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTS 360
           MKAASELFDEMVSSGIKPNDFTFNVLIDGFGK G MR A+ MYEKMLLLGCLPDVVT TS
Sbjct: 348 MKAASELFDEMVSSGIKPNDFTFNVLIDGFGKAGEMRLALAMYEKMLLLGCLPDVVTVTS 407

Query: 361 LIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSE 420
           LIDGYCR GEVNQGLKLWEEMKVR+LSPNVYTYAVLINALCKENRI+EARNFLRHLKSSE
Sbjct: 408 LIDGYCRAGEVNQGLKLWEEMKVRDLSPNVYTYAVLINALCKENRIQEARNFLRHLKSSE 467

Query: 421 VVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAI 480
           +VPKPFIYNPVIDGFCKAGKVDEAN IVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAI
Sbjct: 468 IVPKPFIYNPVIDGFCKAGKVDEANVIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAI 527

Query: 481 STFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQKLNLGLSSLGSPLTRKS 540
           + FYKM+E  C+PDEITINSLISCLLKAG P+EASQIKQAA + LN  L SL +PLTRKS
Sbjct: 528 NIFYKMLETKCIPDEITINSLISCLLKAGRPDEASQIKQAAFENLNFDLLSLKNPLTRKS 587

Query: 541 SRVPVAV 548
           S VPVA+
Sbjct: 588 SCVPVAI 594

[Close]

BLAST of CsaV3_2G001150.1 vs. ExPASy TrEMBL
Match: A0A6J1KES2 (pentatricopeptide repeat-containing protein At2g06000 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493657 PE=4 SV=1)

HSP 1 Score: 984.9 bits (2545), Expect = 1.3e-283
Identity = 481/547 (87.93%), Postives = 511/547 (93.42%), Query Frame = 0


Query: 1   MTLLFFSSRAYRLRTSNFSIAQFYSLADSVSRARPFCDREIIRHSEAWLVKVVCTLFFRS 60
           MTLLFFSSRA R R SNF IAQFYS+AD VSRARPFCDRE+IR+ E+WLVKVVCTLFFRS
Sbjct: 48  MTLLFFSSRACRFRASNFFIAQFYSIADGVSRARPFCDREVIRNPESWLVKVVCTLFFRS 107

Query: 61  HSLNACFGYLSRNLNPSIAFEVIKRFSDPLLGLKFFEFSRTHLSINHTFNTYDLLMRNLC 120
           HSLNACFGYLSRNLNPSIAFEVIKRF DPLLGLKFFEFSRTHLSINHTFNTYDLL+RNLC
Sbjct: 108 HSLNACFGYLSRNLNPSIAFEVIKRFRDPLLGLKFFEFSRTHLSINHTFNTYDLLVRNLC 167

Query: 121 KVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPF 180
           ++GLNDSAK VFDCMR+DGILPDSSI+E+LVSSYA++GKLD+AKNFL+E+HCYGIKV PF
Sbjct: 168 QMGLNDSAKTVFDCMRTDGILPDSSIVEILVSSYAQLGKLDAAKNFLDEIHCYGIKVIPF 227

Query: 181 VYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNM 240
           VYNN LNMLVKQN VDEAVLLFREHLEPYF PDVY+FNILIRGLCRIGE DKAFE+ QNM
Sbjct: 228 VYNNFLNMLVKQNQVDEAVLLFREHLEPYFTPDVYTFNILIRGLCRIGETDKAFEYLQNM 287

Query: 241 GNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGD 300
            NFGCFPDIVSYNTLINGFCRVNE+SKGHDLLKE   IKGVSPDVITYTSIISGYCKLGD
Sbjct: 288 ENFGCFPDIVSYNTLINGFCRVNEVSKGHDLLKEVQSIKGVSPDVITYTSIISGYCKLGD 347

Query: 301 MKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTS 360
           MKAASELFDEMVSSGIKPNDFTFNVLIDGFGK G MR A+ MY+KMLLLGCLPDVVT TS
Sbjct: 348 MKAASELFDEMVSSGIKPNDFTFNVLIDGFGKAGEMRLALAMYDKMLLLGCLPDVVTVTS 407

Query: 361 LIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSE 420
           LIDGYCR GEVNQGLKLWEEMKVR+LSPNVYTYAVLINALCKENRI+EARNFLRHLK SE
Sbjct: 408 LIDGYCRAGEVNQGLKLWEEMKVRDLSPNVYTYAVLINALCKENRIQEARNFLRHLKLSE 467

Query: 421 VVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAI 480
           +VPKPFIYNPVIDGFCKAGKVDEAN IVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAI
Sbjct: 468 IVPKPFIYNPVIDGFCKAGKVDEANVIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAI 527

Query: 481 STFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQKLNLGLSSLGSPLTRKS 540
           + FYKM+E  C+PDEITINSLISCLLKAGMP+EASQIKQAAL+ LN  L SL +PLT KS
Sbjct: 528 NIFYKMLETKCIPDEITINSLISCLLKAGMPDEASQIKQAALEYLNFDLLSLKNPLTIKS 587

Query: 541 SRVPVAV 548
           S VPVA+
Sbjct: 588 SCVPVAI 594

[Close]

BLAST of CsaV3_2G001150.1 vs. ExPASy TrEMBL
Match: A0A6J1DMW0 (pentatricopeptide repeat-containing protein At2g06000 OS=Momordica charantia OX=3673 GN=LOC111021880 PE=4 SV=1)

HSP 1 Score: 958.4 bits (2476), Expect = 1.3e-275
Identity = 471/547 (86.11%), Postives = 501/547 (91.59%), Query Frame = 0


Query: 1   MTLLFFSSRAYRLRTSNFSIAQFYSLADSVSRARPFCDREIIRHSEAWLVKVVCTLFFRS 60
           MTLLFFSSRAYR R S+FSIAQF+S  D  SRAR F DRE+IR+ EAWL KVVCTLFFRS
Sbjct: 48  MTLLFFSSRAYRFRASSFSIAQFHSFTDGGSRARSFYDREVIRNPEAWLAKVVCTLFFRS 107

Query: 61  HSLNACFGYLSRNLNPSIAFEVIKRFSDPLLGLKFFEFSRTHLSINHTFNTYDLLMRNLC 120
           HSLN CFGYLSRNL PSIAFEVIKRF DP+LGLKFFEFSR HLSINH+FNTYDLLMRNLC
Sbjct: 108 HSLNGCFGYLSRNLTPSIAFEVIKRFKDPILGLKFFEFSRAHLSINHSFNTYDLLMRNLC 167

Query: 121 KVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPF 180
           ++GL+ SAK+VFDCMR DGILPDSS++ELLVSSYA+MGKLDSAK FLNEVHCYGIKVSPF
Sbjct: 168 QMGLHGSAKMVFDCMRCDGILPDSSVVELLVSSYAQMGKLDSAKIFLNEVHCYGIKVSPF 227

Query: 181 VYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNM 240
           VYNNLLN+LVKQN VDEAVLLFREHLEPYF+PD Y+FNI+IRGLCRIGEI KAFEFFQNM
Sbjct: 228 VYNNLLNLLVKQNQVDEAVLLFREHLEPYFIPDAYTFNIIIRGLCRIGEIHKAFEFFQNM 287

Query: 241 GNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGD 300
           GNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKE   +KGV+PDVITYTSIISGYCKLGD
Sbjct: 288 GNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEVQSVKGVAPDVITYTSIISGYCKLGD 347

Query: 301 MKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTS 360
           MKAAS L DEMV SGIKPNDFTFNVLI GFGKVG+M SA+ MYEKMLLLGC PDVVT TS
Sbjct: 348 MKAASGLLDEMVGSGIKPNDFTFNVLIHGFGKVGDMISALAMYEKMLLLGCPPDVVTLTS 407

Query: 361 LIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSE 420
           LIDGYCR GEVNQGLKLWEEMKVR LSPNVYTYAVLINALCKENRI+EAR FLRHLK SE
Sbjct: 408 LIDGYCRAGEVNQGLKLWEEMKVRGLSPNVYTYAVLINALCKENRIQEARFFLRHLKLSE 467

Query: 421 VVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAI 480
           VVPK FIYNPVIDGFCKAGKVDEAN IVAEM+EKKC PDKITFTILIIGNCM+GRMVEAI
Sbjct: 468 VVPKTFIYNPVIDGFCKAGKVDEANVIVAEMREKKCSPDKITFTILIIGNCMQGRMVEAI 527

Query: 481 STFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQKLNLGLSSLGSPLTRKS 540
           S FYKM+E NC+PDEITINSLISCLLKAGMPNEASQIKQAA++ LNLGL SL +PL RK 
Sbjct: 528 SIFYKMLETNCIPDEITINSLISCLLKAGMPNEASQIKQAAVENLNLGLLSLRNPLVRKP 587

Query: 541 SRVPVAV 548
           S VP+AV
Sbjct: 588 SCVPIAV 594

[Close]

BLAST of CsaV3_2G001150.1 vs. TAIR 10
Match: AT2G06000.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 560.8 bits (1444), Expect = 1.2e-159
Identity = 283/532 (53.20%), Postives = 379/532 (71.24%), Query Frame = 0


Query: 19  SIAQFYSLADSVSRARPFCD--REIIRHSEAWLVKVVCTLF-FRSHSLNACFGYLSRNLN 78
           +IA F++ +   ++ARP  +  RE+I   EAWLVK+V TLF +R    + CF YLS+NLN
Sbjct: 9   AIAHFHTHSHGGAQARPLQNNTREVIHCPEAWLVKIVSTLFVYRVPDSDLCFCYLSKNLN 68

Query: 79  PSIAFEVIKRF-SDPLLGLKFFEFSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDC 138
           P I+FEV+K+  ++P +G +F+EFSR  L+I H+F TY+LL R+LCK GL+D A  +F+C
Sbjct: 69  PFISFEVVKKLDNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFEC 128

Query: 139 MRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNL 198
           M+SDG+ P++ +L  LVSS+A  GKL  A   L  +  + ++    V N+LLN LVK + 
Sbjct: 129 MKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL--LQSFEVEGCCMVVNSLLNTLVKLDR 188

Query: 199 VDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNT 258
           V++A+ LF EHL      D  +FNILIRGLC +G+ +KA E    M  FGC PDIV+YNT
Sbjct: 189 VEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNT 248

Query: 259 LINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSS 318
           LI GFC+ NE++K  ++ K+       SPDV+TYTS+ISGYCK G M+ AS L D+M+  
Sbjct: 249 LIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRL 308

Query: 319 GIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQG 378
           GI P + TFNVL+DG+ K G M +A  +  KM+  GC PDVVTFTSLIDGYCR G+V+QG
Sbjct: 309 GIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQG 368

Query: 379 LKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDG 438
            +LWEEM  R + PN +TY++LINALC ENR+ +AR  L  L S +++P+PF+YNPVIDG
Sbjct: 369 FRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDG 428

Query: 439 FCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPD 498
           FCKAGKV+EAN IV EM++KKC+PDKITFTILIIG+CMKGRM EA+S F+KM+ I C PD
Sbjct: 429 FCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPD 488

Query: 499 EITINSLISCLLKAGMPNEASQIKQAALQKLNLGLSSLGSPLTRKSSRVPVA 547
           +IT++SL+SCLLKAGM  EA  + Q A +    G S+   PL  K++   +A
Sbjct: 489 KITVSSLLSCLLKAGMAKEAYHLNQIARK----GQSNNVVPLETKTANATLA 534

[Close]

BLAST of CsaV3_2G001150.1 vs. TAIR 10
Match: AT2G06000.2 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 560.8 bits (1444), Expect = 1.2e-159
Identity = 283/532 (53.20%), Postives = 379/532 (71.24%), Query Frame = 0


Query: 19  SIAQFYSLADSVSRARPFCD--REIIRHSEAWLVKVVCTLF-FRSHSLNACFGYLSRNLN 78
           +IA F++ +   ++ARP  +  RE+I   EAWLVK+V TLF +R    + CF YLS+NLN
Sbjct: 9   AIAHFHTHSHGGAQARPLQNNTREVIHCPEAWLVKIVSTLFVYRVPDSDLCFCYLSKNLN 68

Query: 79  PSIAFEVIKRF-SDPLLGLKFFEFSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDC 138
           P I+FEV+K+  ++P +G +F+EFSR  L+I H+F TY+LL R+LCK GL+D A  +F+C
Sbjct: 69  PFISFEVVKKLDNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFEC 128

Query: 139 MRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNL 198
           M+SDG+ P++ +L  LVSS+A  GKL  A   L  +  + ++    V N+LLN LVK + 
Sbjct: 129 MKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL--LQSFEVEGCCMVVNSLLNTLVKLDR 188

Query: 199 VDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNT 258
           V++A+ LF EHL      D  +FNILIRGLC +G+ +KA E    M  FGC PDIV+YNT
Sbjct: 189 VEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNT 248

Query: 259 LINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSS 318
           LI GFC+ NE++K  ++ K+       SPDV+TYTS+ISGYCK G M+ AS L D+M+  
Sbjct: 249 LIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRL 308

Query: 319 GIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQG 378
           GI P + TFNVL+DG+ K G M +A  +  KM+  GC PDVVTFTSLIDGYCR G+V+QG
Sbjct: 309 GIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQG 368

Query: 379 LKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDG 438
            +LWEEM  R + PN +TY++LINALC ENR+ +AR  L  L S +++P+PF+YNPVIDG
Sbjct: 369 FRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDG 428

Query: 439 FCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPD 498
           FCKAGKV+EAN IV EM++KKC+PDKITFTILIIG+CMKGRM EA+S F+KM+ I C PD
Sbjct: 429 FCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPD 488

Query: 499 EITINSLISCLLKAGMPNEASQIKQAALQKLNLGLSSLGSPLTRKSSRVPVA 547
           +IT++SL+SCLLKAGM  EA  + Q A +    G S+   PL  K++   +A
Sbjct: 489 KITVSSLLSCLLKAGMAKEAYHLNQIARK----GQSNNVVPLETKTANATLA 534

[Close]

BLAST of CsaV3_2G001150.1 vs. TAIR 10
Match: AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 269.2 bits (687), Expect = 7.1e-72
Identity = 152/474 (32.07%), Postives = 255/474 (53.80%), Query Frame = 0


Query: 69  YLSRNLNPSIAFE-VIKRFSDPLLGLKFFEFSRTH--------------LSINHTFNTYD 128
           +LS N  P  A   ++K  +D  L LKF  ++  H              L+    + T  
Sbjct: 41  HLSANFTPEAASNLLLKSQNDQALILKFLNWANPHQFFTLRCKCITLHILTKFKLYKTAQ 100

Query: 129 LLMRNLCKVGLNDS-AKIVFDCMRS--DGILPDSSILELLVSSYARMGKLDSAKNFLNEV 188
           +L  ++    L+D  A +VF  ++   D     SS+ +L+V SY+R+  +D A + ++  
Sbjct: 101 ILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLA 160

Query: 189 HCYGIKVSPFVYNNLLNMLVK-QNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGE 248
             +G       YN +L+  ++ +  +  A  +F+E LE    P+V+++NILIRG C  G 
Sbjct: 161 QAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGN 220

Query: 249 IDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYT 308
           ID A   F  M   GC P++V+YNTLI+G+C++ +I  G  LL+  M +KG+ P++I+Y 
Sbjct: 221 IDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLR-SMALKGLEPNLISYN 280

Query: 309 SIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLL 368
            +I+G C+ G MK  S +  EM   G   ++ T+N LI G+ K GN   A+VM+ +ML  
Sbjct: 281 VVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRH 340

Query: 369 GCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREA 428
           G  P V+T+TSLI   C+ G +N+ ++  ++M+VR L PN  TY  L++   ++  + EA
Sbjct: 341 GLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEA 400

Query: 429 RNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIG 488
              LR +  +   P    YN +I+G C  GK+++A  ++ +M+EK   PD ++++ ++ G
Sbjct: 401 YRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSG 460

Query: 489 NCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQ 524
            C    + EA+    +M+E    PD IT +SLI    +     EA  + +  L+
Sbjct: 461 FCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLR 513

[Close]

BLAST of CsaV3_2G001150.1 vs. TAIR 10
Match: AT5G65560.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 248.8 bits (634), Expect = 9.9e-66
Identity = 144/399 (36.09%), Postives = 214/399 (53.63%), Query Frame = 0


Query: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEV 170
           TY+ ++   CK+G  + A      +   G+ PD      L+  Y +   LDSA    NE+
Sbjct: 220 TYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEM 279

Query: 171 HCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEI 230
              G + +   Y +L++ L     +DEA+ LF +  +    P V ++ +LI+ LC     
Sbjct: 280 PLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERK 339

Query: 231 DKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTS 290
            +A    + M   G  P+I +Y  LI+  C   +  K  +LL + ML KG+ P+VITY +
Sbjct: 340 SEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQ-MLEKGLMPNVITYNA 399

Query: 291 IISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLG 350
           +I+GYCK G ++ A ++ + M S  + PN  T+N LI G+ K  N+  AM +  KML   
Sbjct: 400 LINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERK 459

Query: 351 CLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREAR 410
            LPDVVT+ SLIDG CR G  +   +L   M  R L P+ +TY  +I++LCK  R+ EA 
Sbjct: 460 VLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEAC 519

Query: 411 NFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGN 470
           +    L+   V P   +Y  +IDG+CKAGKVDEA+ ++ +M  K C P+ +TF  LI G 
Sbjct: 520 DLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGL 579

Query: 471 CMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAG 510
           C  G++ EA     KM++I   P   T   LI  LLK G
Sbjct: 580 CADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDG 616

[Close]

BLAST of CsaV3_2G001150.1 vs. TAIR 10
Match: AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 242.3 bits (617), Expect = 9.3e-64
Identity = 137/436 (31.42%), Postives = 231/436 (52.98%), Query Frame = 0


Query: 93  LKFFEFSRTHLS---INHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILEL 152
           LK  E S   +S   I    +T+++L++ LC+      A ++ + M S G++PD      
Sbjct: 170 LKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTT 229

Query: 153 LVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFRE-HLEP 212
           ++  Y   G LD A     ++  +G   S    N +++   K+  V++A+   +E   + 
Sbjct: 230 VMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQD 289

Query: 213 YFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKG 272
            F PD Y+FN L+ GLC+ G +  A E    M   G  PD+ +YN++I+G C++ E+ + 
Sbjct: 290 GFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEA 349

Query: 273 HDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLID 332
            ++L + M+ +  SP+ +TY ++IS  CK   ++ A+EL   + S GI P+  TFN LI 
Sbjct: 350 VEVL-DQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQ 409

Query: 333 GFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSP 392
           G     N R AM ++E+M   GC PD  T+  LID  C +G++++ L + ++M++   + 
Sbjct: 410 GLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCAR 469

Query: 393 NVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIV 452
           +V TY  LI+  CK N+ REA      ++   V      YN +IDG CK+ +V++A  ++
Sbjct: 470 SVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLM 529

Query: 453 AEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKA 512
            +M  +  +PDK T+  L+   C  G + +A      M    C PD +T  +LIS L KA
Sbjct: 530 DQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKA 589

Query: 513 GMPNEASQIKQAALQK 525
           G    AS++ ++   K
Sbjct: 590 GRVEVASKLLRSIQMK 604

The following BLAST results are available for this feature:

BLAST of CsaV3_2G001150.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8651488.1	0.0e+00	100.00	hypothetical protein Csa_019253 [Cucumis sativus]	[more]
XP_008459803.1	1.5e-305	96.17	PREDICTED: pentatricopeptide repeat-containing protein At2g06000 [Cucumis melo] ...	[more]
KAA0061465.1	2.5e-305	96.17	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK10809...	[more]
XP_038890050.1	5.3e-295	91.96	pentatricopeptide repeat-containing protein At2g06000 [Benincasa hispida]	[more]
XP_031736975.1	1.0e-293	93.98	pentatricopeptide repeat-containing protein At2g06000 [Cucumis sativus]	[more]

BLAST of CsaV3_2G001150.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZUE9	1.7e-158	53.20	Pentatricopeptide repeat-containing protein At2g06000 OS=Arabidopsis thaliana OX...	[more]
Q9FIX3	1.0e-70	32.07	Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX...	[more]
Q9LSL9	1.4e-64	36.09	Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana OX...	[more]
Q9LFF1	1.3e-62	31.42	Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop...	[more]
Q6NQ83	7.9e-60	30.87	Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidop...	[more]

BLAST of CsaV3_2G001150.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CB42	7.2e-306	96.17	pentatricopeptide repeat-containing protein At2g06000 OS=Cucumis melo OX=3656 GN...	[more]
A0A5A7V6K1	1.2e-305	96.17	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1G470	6.3e-286	88.48	pentatricopeptide repeat-containing protein At2g06000 isoform X1 OS=Cucurbita mo...	[more]
A0A6J1KES2	1.3e-283	87.93	pentatricopeptide repeat-containing protein At2g06000 isoform X1 OS=Cucurbita ma...	[more]
A0A6J1DMW0	1.3e-275	86.11	pentatricopeptide repeat-containing protein At2g06000 OS=Momordica charantia OX=...	[more]

BLAST of CsaV3_2G001150.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G06000.1	1.2e-159	53.20	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G06000.2	1.2e-159	53.20	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G39710.1	7.1e-72	32.07	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G65560.1	9.9e-66	36.09	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G53700.1	9.3e-64	31.42	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 391..423 e-value: 1.1E-5 score: 23.3 coord: 427..459 e-value: 6.7E-9 score: 33.4 coord: 250..285 e-value: 1.6E-7 score: 29.1 coord: 461..495 e-value: 0.001 score: 17.1 coord: 286..319 e-value: 5.4E-12 score: 43.1 coord: 356..390 e-value: 4.8E-10 score: 37.0 coord: 321..355 e-value: 3.5E-8 score: 31.1 coord: 215..249 e-value: 1.5E-9 score: 35.4
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 497..516 e-value: 0.15 score: 12.3 coord: 150..175 e-value: 0.41 score: 11.0 coord: 111..140 e-value: 0.013 score: 15.7 coord: 181..204 e-value: 0.015 score: 15.5
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 212..261 e-value: 5.3E-16 score: 58.6 coord: 353..402 e-value: 2.9E-20 score: 72.2 coord: 426..471 e-value: 7.8E-13 score: 48.4 coord: 283..331 e-value: 4.6E-19 score: 68.4
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 284..318 score: 14.699161
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 424..458 score: 12.024604
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 354..388 score: 13.493418
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 108..142 score: 9.909073
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 248..283 score: 11.783455
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 459..493 score: 9.744654
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 389..423 score: 11.509422
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 178..212 score: 8.889672
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 319..353 score: 11.465577
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 213..247 score: 13.054966
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 242..312 e-value: 9.0E-23 score: 82.8 coord: 174..241 e-value: 1.8E-16 score: 62.2 coord: 384..451 e-value: 1.4E-19 score: 72.4 coord: 63..173 e-value: 4.0E-9 score: 38.2 coord: 452..523 e-value: 1.1E-15 score: 59.6 coord: 313..383 e-value: 1.4E-21 score: 78.9
None	No IPR available	PANTHER	PTHR47941:SF1	OSJNBA0027P08.18 PROTEIN	coord: 15..547
None	No IPR available	PANTHER	PTHR47941	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 3, MITOCHONDRIAL	coord: 15..547
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 154..347

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsaV3_2G001150	CsaV3_2G001150	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_2G001150.1.exon3	CsaV3_2G001150.1.exon3	exon
CsaV3_2G001150.1.exon2	CsaV3_2G001150.1.exon2	exon
CsaV3_2G001150.1.exon1	CsaV3_2G001150.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_2G001150.1.cds2	CsaV3_2G001150.1.cds2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsaV3_2G001150.1	CsaV3_2G001150.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding