Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAATCAAAGGTCCTTAAAAAGGTGACCATAAACCTTCATGATAAACACACACCAACTTCACAATCTTCAAAAATCTCTCCTTATTAAACTTTCTTCTCCAAAAATCCTCTTCTTTTTTGTATTACAAATTCTCAAGAAGAAAAATAATTAAACCGATGTGGCGGTTGGCGGCGGCAGTTAGAAGAAACCTCCACAACATAAGGAAGAGCCCACGAGTGGCAGATGAAAGCATGTACGGCGGCGGAGTTGACGGTGGCGGAAGGGTGGGGGCGGTGGTGGACGGTGACCGAAGAGAAGGTAATTCATATGGGTTTTCTATGATTTACAGCCTTCTTCGAACCCCATTTTCGATTCTGTCTTGCTTTTCTCAACCACACGTTAATGGGGTCGACGGGATGTGGGTCTCCGGCGAGTTTCCAAGAATCTCGGAAGTTAATCATCTTATGGTAAGCGACAGCATGAGATATGCAATATTAATGTAAATAAAATAAATAAATGGGGTTTCTTCCTCCTCTGTAGTAATTTCGATTGGATCTGGTTTTCAAAAAGAGTCACAAATCGAATGCTATAGAATTATTAATTGGTATCATATACTTTGATCGGTTTTACTTTTTCTTTTTTCTTTTTTGTTTCCTTTTTGTGTTAGAATATTGTATAACAAATTGTGGGTGTGTAACGTTACAGTCAGTTATGCTTGAATTGACGGTTTAAAATTGACTTGAATTTTGAAATTTAGTGATCTTATATGTACGTATATGTTCTTGTATACAATAATGTATTAGTTCAAAAGTTAC
mRNA sequence
AAAAATCAAAGGTCCTTAAAAAGGTGACCATAAACCTTCATGATAAACACACACCAACTTCACAATCTTCAAAAATCTCTCCTTATTAAACTTTCTTCTCCAAAAATCCTCTTCTTTTTTGTATTACAAATTCTCAAGAAGAAAAATAATTAAACCGATGTGGCGGTTGGCGGCGGCAGTTAGAAGAAACCTCCACAACATAAGGAAGAGCCCACGAGTGGCAGATGAAAGCATGTACGGCGGCGGAGTTGACGGTGGCGGAAGGGTGGGGGCGGTGGTGGACGGTGACCGAAGAGAAGGTAATTCATATGGGTTTTCTATGATTTACAGCCTTCTTCGAACCCCATTTTCGATTCTGTCTTGCTTTTCTCAACCACACGTTAATGGGGTCGACGGGATGTGGGTCTCCGGCGAGTTTCCAAGAATCTCGGAAGTTAATCATCTTATGGTAAGCGACAGCATGAGATATGCAATATTAATGTAAATAAAATAAATAAATGGGGTTTCTTCCTCCTCTGTAGTAATTTCGATTGGATCTGGTTTTCAAAAAGAGTCACAAATCGAATGCTATAGAATTATTAATTGGTATCATATACTTTGATCGGTTTTACTTTTTCTTTTTTCTTTTTTGTTTCCTTTTTGTGTTAGAATATTGTATAACAAATTGTGGGTGTGTAACGTTACAGTCAGTTATGCTTGAATTGACGGTTTAAAATTGACTTGAATTTTGAAATTTAGTGATCTTATATGTACGTATATGTTCTTGTATACAATAATGTATTAGTTCAAAAGTTAC
Coding sequence (CDS)
ATGTGGCGGTTGGCGGCGGCAGTTAGAAGAAACCTCCACAACATAAGGAAGAGCCCACGAGTGGCAGATGAAAGCATGTACGGCGGCGGAGTTGACGGTGGCGGAAGGGTGGGGGCGGTGGTGGACGGTGACCGAAGAGAAGGTAATTCATATGGGTTTTCTATGATTTACAGCCTTCTTCGAACCCCATTTTCGATTCTGTCTTGCTTTTCTCAACCACACGTTAATGGGGTCGACGGGATGTGGGTCTCCGGCGAGTTTCCAAGAATCTCGGAAGTTAATCATCTTATGGTAAGCGACAGCATGAGATATGCAATATTAATGTAA
Protein sequence
MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRVGAVVDGDRREGNSYGFSMIYSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM*
Homology
BLAST of CsGy7G002655 vs. NCBI nr
Match:
XP_031744820.1 (uncharacterized protein LOC101211016 [Cucumis sativus] >KAE8645720.1 hypothetical protein Csa_020583 [Cucumis sativus])
HSP 1 Score: 223 bits (567), Expect = 2.68e-73
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0
Query: 1 MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRVGAVVDGDRREGNSYGFSMIYSLL 60
MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRVGAVVDGDRREGNSYGFSMIYSLL
Sbjct: 1 MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRVGAVVDGDRREGNSYGFSMIYSLL 60
Query: 61 RTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM 108
RTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM
Sbjct: 61 RTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM 108
BLAST of CsGy7G002655 vs. NCBI nr
Match:
KAA0059153.1 (uncharacterized protein E6C27_scaffold430G00710 [Cucumis melo var. makuwa] >TYK02535.1 uncharacterized protein E5676_scaffold201G00140 [Cucumis melo var. makuwa])
HSP 1 Score: 216 bits (549), Expect = 1.54e-70
Identity = 107/109 (98.17%), Postives = 107/109 (98.17%), Query Frame = 0
Query: 1 MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRVGAVV-DGDRREGNSYGFSMIYSL 60
MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRV AVV DGDRREGNSYGFSMIYSL
Sbjct: 1 MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRVAAVVVDGDRREGNSYGFSMIYSL 60
Query: 61 LRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM 108
LRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM
Sbjct: 61 LRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM 109
BLAST of CsGy7G002655 vs. NCBI nr
Match:
XP_038888385.1 (uncharacterized protein LOC120078235 [Benincasa hispida])
HSP 1 Score: 214 bits (546), Expect = 4.88e-70
Identity = 107/112 (95.54%), Postives = 107/112 (95.54%), Query Frame = 0
Query: 1 MWRLAAAVRRNLHNIRKSPRVADESMYGG----GVDGGGRVGAVVDGDRREGNSYGFSMI 60
MWRLAAAVRRNLHNIRKSPRVADESMYGG GVDGGGRV AVVDGDRREGNSYGFSMI
Sbjct: 1 MWRLAAAVRRNLHNIRKSPRVADESMYGGAGGGGVDGGGRVAAVVDGDRREGNSYGFSMI 60
Query: 61 YSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM 108
YSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM
Sbjct: 61 YSLLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM 112
BLAST of CsGy7G002655 vs. NCBI nr
Match:
KAG6572248.1 (hypothetical protein SDJN03_28976, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011878.1 hypothetical protein SDJN02_26785, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 200 bits (509), Expect = 1.83e-64
Identity = 99/110 (90.00%), Postives = 104/110 (94.55%), Query Frame = 0
Query: 1 MWRLAAAVRRNLHNIRKSPRVADESMY--GGGVDGGGRVGAVVDGDRREGNSYGFSMIYS 60
MWRLAAAVRRNLHNIRKSPRVADESMY GGG DGGGRV +DG+RR+GNSYGFSMIY+
Sbjct: 1 MWRLAAAVRRNLHNIRKSPRVADESMYSAGGGADGGGRV---IDGNRRDGNSYGFSMIYT 60
Query: 61 LLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM 108
LLRTPFS+LSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM
Sbjct: 61 LLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM 107
BLAST of CsGy7G002655 vs. NCBI nr
Match:
XP_022969305.1 (uncharacterized protein LOC111468352 [Cucurbita maxima])
HSP 1 Score: 197 bits (500), Expect = 4.33e-63
Identity = 98/110 (89.09%), Postives = 102/110 (92.73%), Query Frame = 0
Query: 1 MWRLAAAVRRNLHNIRKSPRVADESMY--GGGVDGGGRVGAVVDGDRREGNSYGFSMIYS 60
MWRLAAAVRRNLHNIRKSPRVADESMY GGG DGG V +DG+RREGNSYGFSMIY+
Sbjct: 1 MWRLAAAVRRNLHNIRKSPRVADESMYSAGGGADGGATV---IDGNRREGNSYGFSMIYT 60
Query: 61 LLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM 108
LLRTPFS+LSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM
Sbjct: 61 LLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM 107
BLAST of CsGy7G002655 vs. ExPASy TrEMBL
Match:
A0A5D3BTM8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold201G00140 PE=4 SV=1)
HSP 1 Score: 216 bits (549), Expect = 7.48e-71
Identity = 107/109 (98.17%), Postives = 107/109 (98.17%), Query Frame = 0
Query: 1 MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRVGAVV-DGDRREGNSYGFSMIYSL 60
MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRV AVV DGDRREGNSYGFSMIYSL
Sbjct: 1 MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRVAAVVVDGDRREGNSYGFSMIYSL 60
Query: 61 LRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM 108
LRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM
Sbjct: 61 LRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM 109
BLAST of CsGy7G002655 vs. ExPASy TrEMBL
Match:
A0A6J1HZK3 (uncharacterized protein LOC111468352 OS=Cucurbita maxima OX=3661 GN=LOC111468352 PE=4 SV=1)
HSP 1 Score: 197 bits (500), Expect = 2.09e-63
Identity = 98/110 (89.09%), Postives = 102/110 (92.73%), Query Frame = 0
Query: 1 MWRLAAAVRRNLHNIRKSPRVADESMY--GGGVDGGGRVGAVVDGDRREGNSYGFSMIYS 60
MWRLAAAVRRNLHNIRKSPRVADESMY GGG DGG V +DG+RREGNSYGFSMIY+
Sbjct: 1 MWRLAAAVRRNLHNIRKSPRVADESMYSAGGGADGGATV---IDGNRREGNSYGFSMIYT 60
Query: 61 LLRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM 108
LLRTPFS+LSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM
Sbjct: 61 LLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM 107
BLAST of CsGy7G002655 vs. ExPASy TrEMBL
Match:
A0A1S3C134 (uncharacterized protein LOC103495667 OS=Cucumis melo OX=3656 GN=LOC103495667 PE=4 SV=1)
HSP 1 Score: 197 bits (501), Expect = 8.75e-63
Identity = 98/104 (94.23%), Postives = 99/104 (95.19%), Query Frame = 0
Query: 1 MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRVGAVV-DGDRREGNSYGFSMIYSL 60
MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRV AVV DGDRREGNSYGFSMIYSL
Sbjct: 41 MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRVAAVVVDGDRREGNSYGFSMIYSL 100
Query: 61 LRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMR 103
LRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLM S+ R
Sbjct: 101 LRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMQSNLWR 144
BLAST of CsGy7G002655 vs. ExPASy TrEMBL
Match:
A0A6J1C6U0 (uncharacterized protein LOC111007908 OS=Momordica charantia OX=3673 GN=LOC111007908 PE=4 SV=1)
HSP 1 Score: 182 bits (463), Expect = 8.93e-58
Identity = 90/108 (83.33%), Postives = 95/108 (87.96%), Query Frame = 0
Query: 1 MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRVGAVVDGDRREGNSYGFSMIYSLL 60
MWRLAA +RRNLHNIRKSPRVADESMYGGG GG G V + DRR GNSYGFSMIYS+L
Sbjct: 1 MWRLAAELRRNLHNIRKSPRVADESMYGGGGGDGG--GIVAERDRRGGNSYGFSMIYSVL 60
Query: 61 RTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM 108
RTPFS+L CFSQPHVNG DG+WVSGEF RISEVNHLMVSDSMRYAILM
Sbjct: 61 RTPFSVLCCFSQPHVNGADGLWVSGEFARISEVNHLMVSDSMRYAILM 106
BLAST of CsGy7G002655 vs. ExPASy TrEMBL
Match:
A0A6J1ER34 (uncharacterized protein LOC111437033 OS=Cucurbita moschata OX=3662 GN=LOC111437033 PE=4 SV=1)
HSP 1 Score: 177 bits (448), Expect = 1.79e-55
Identity = 91/109 (83.49%), Postives = 96/109 (88.07%), Query Frame = 0
Query: 1 MWRLAAAVRRNLHNIRKSPRVADESMY-GGGVDGGGRVGAVVDGDRREGNSYGFSMIYSL 60
MWRLAAAVR LHNIRKSPRVADESM+ GGGVDGGGRV V G RRE NS+G S+IY++
Sbjct: 1 MWRLAAAVRSKLHNIRKSPRVADESMFSGGGVDGGGRV--VDGGRRRERNSHGVSIIYNV 60
Query: 61 LRTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM 108
LRTPFS LSCFS PHVNGVDGMWVSGEF RISEVNHLMVSDSMRYAILM
Sbjct: 61 LRTPFSFLSCFSHPHVNGVDGMWVSGEFARISEVNHLMVSDSMRYAILM 107
BLAST of CsGy7G002655 vs. TAIR 10
Match:
AT5G35732.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G04795.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )
HSP 1 Score: 110.5 bits (275), Expect = 8.4e-25
Identity = 59/108 (54.63%), Postives = 78/108 (72.22%), Query Frame = 0
Query: 1 MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRVGAVVDGDRREGNSYGFSMIYSLL 60
M ++ + +RRNL N+RKSPRVAD++ G G G V +G RR+ GF+ + ++
Sbjct: 1 MTQMLSVLRRNLQNLRKSPRVADDTELPSSTSGAG-PGVVANG-RRD----GFNSV--IM 60
Query: 61 RTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM 109
R PFSI+SCF+ P V+G DG+WVSG++ ISEVNHLMVSDSMRYAILM
Sbjct: 61 RFPFSIISCFAVPRVSGTDGLWVSGDYGSISEVNHLMVSDSMRYAILM 100
BLAST of CsGy7G002655 vs. TAIR 10
Match:
AT2G04795.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G35732.1); Has 18 Blast hits to 18 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 100.1 bits (248), Expect = 1.1e-21
Identity = 52/108 (48.15%), Postives = 68/108 (62.96%), Query Frame = 0
Query: 1 MWRLAAAVRRNLHNIRKSPRVADESMYGGGVDGGGRVGAVVDGDRREGNSYGFSMIYSLL 60
M ++ + +RRNL N+RKSPRVADES V+GD GN ++
Sbjct: 1 MLKMLSILRRNLQNLRKSPRVADES---------ALPSTTVNGDHGGGNGSN----GGIM 60
Query: 61 RTPFSILSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM 109
+ P SI+SCFS P V+ DG+WVSG++ R+SEVNHLMV D MRYA+LM
Sbjct: 61 KFPLSIMSCFSVPRVSRADGVWVSGDYGRVSEVNHLMVCDGMRYALLM 95
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| XP_031744820.1 | 2.68e-73 | 100.00 | uncharacterized protein LOC101211016 [Cucumis sativus] >KAE8645720.1 hypothetica... | [more] |
| KAA0059153.1 | 1.54e-70 | 98.17 | uncharacterized protein E6C27_scaffold430G00710 [Cucumis melo var. makuwa] >TYK0... | [more] |
| XP_038888385.1 | 4.88e-70 | 95.54 | uncharacterized protein LOC120078235 [Benincasa hispida] | [more] |
| KAG6572248.1 | 1.83e-64 | 90.00 | hypothetical protein SDJN03_28976, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| XP_022969305.1 | 4.33e-63 | 89.09 | uncharacterized protein LOC111468352 [Cucurbita maxima] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3BTM8 | 7.48e-71 | 98.17 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A6J1HZK3 | 2.09e-63 | 89.09 | uncharacterized protein LOC111468352 OS=Cucurbita maxima OX=3661 GN=LOC111468352... | [more] |
| A0A1S3C134 | 8.75e-63 | 94.23 | uncharacterized protein LOC103495667 OS=Cucumis melo OX=3656 GN=LOC103495667 PE=... | [more] |
| A0A6J1C6U0 | 8.93e-58 | 83.33 | uncharacterized protein LOC111007908 OS=Momordica charantia OX=3673 GN=LOC111007... | [more] |
| A0A6J1ER34 | 1.79e-55 | 83.49 | uncharacterized protein LOC111437033 OS=Cucurbita moschata OX=3662 GN=LOC1114370... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT5G35732.1 | 8.4e-25 | 54.63 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |
| AT2G04795.1 | 1.1e-21 | 48.15 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |
