CsGy6G017442 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATTTTCATTACTGCTGTGTTATAAATTATAGTTTTTTCTTTTCCTTCAATTTCTGTTCTCTTTTATGTATGTTTTCAATTTCTTCTTGACATCATTCATTAAGTTTCACTGTTTTGGATTGGATGTATATCAGATATGTAATTGGTGATCCATTTCAGTTTCGTTTGAATTCTTTCTTATATGTAAAAATCATGAGATTTTCTTTAAGAAACCGGTCCATAATAAGAGATTTTTTTTTATTCTTGCACGAGAAACAAAGGCTAAATTAAAATAAATCCATAAGTGCATCAGGACATTCCCAATTAAGTTGACACATTGGTATAAGCACTCTCACATCATACTTTAAATTCAATTGTAGATGAATTAATAACAAAGAAGCATACTTGAGAAAATAACATGTTCACTAATCCATTGTCAACATATAATAATTTTAAATATGATCTCGTGGCAAACCATTTTTGTTAGTTTAATTTGAACAGAGACTCAAAAAACGTTGTAGTAACTTACCCATAAATATGTTCGATTCATCTAGTCTCGATTTAGCGAATCACAAAGCATTTAGAAACTTTTCATAGTCTCCTTTTAAGGTTGTGTGAATAAGAATTAATTCTGAACCTCAAGATTTATTTTCAAATAAATATAAGAGAACAATGAATGTGGTGAGTGGTGGCTGTTTTTCTGCATCCACATCTCTTGACTTTACCCTCATTATTTATTTTATATATCCACTTGGTTCATATTCAAACAAAGCTGTTAATGCATGTGTAAGGAGGGTCCCAACTATATACCACACATTGCATTTTATTCCCTTTAACTAAAGTTGGTATTTTCATTGTAATATTCTTTAAATGTCACTAAATTATAAAGTGGAGTTCAACTTCGTTTAAATCAAGTTGAAATTTTTTCTAATGGTCTGGTTGGAAGCACTTAAATTTCCATCCAACCTTTAGTCTAATTCGATAATCATTTAAGTGATTCTGTTTTTCAATTTAAATGCCAATAGATTTAGTATATATGAAAAAACATCAGATATAAACTAGAGATACAATGTTGGTTCAAAAATTATAACAAGGAAATTAACAAAATGAAACAAGCAAAGAAAGAATTGAAGAGAAGTAACACAAGATCAAAATTGGTAATTTTCAATGCTTAACACATACATATGTGAGCTATGTCCGAATAAGGCTGTTCATTAGAGTAAATGAAAAGGATTGCACATTGACAATGTTATCAGTAATCTTGATAGATGACAAGATTAGACTAACCATCACTTAGACTATTCCTAAATAGTTGAAATTTGATTGACTCTCCTTAATATAATTAGCTCCTCTGAATTATTCACTCCATCGTTGTAGTTAAACTACAACGATCTCTTCTCATAAAATGTTGTTTAACACATGACAACCACCAACCTGTCTCACAAGATCAGATCAACGCTGCAAACTCTCCAAGATCAATTTTTATATAAACAGAATATAGCACACAAAGAAGAAGAAAAACTTAAGCAGTCATTCTCTCTGAATACAAACTAAACTTCTTAAATTTCCACCAAGGATGGCGCCCACCTTATTAAGCAAAATAATCTAATTAACCACTAAAGGTAATACAATTAACACACCATAATGTCATGTAATTCATTGATTAATACAAAAAGGAATTAGTTCAATAAGAAAAGAAAATAAATGTTGAAATTAAATTAATCTAAACTTAATACATGAAATTGCATTATTAAATGTGCATGGATAGTTGAGATACATGGAATAGTTAATCACTAAATATATTGATATATAAAGAGTCACATGTATTTATTATTGATGACTTTTAGCTTGCTTTTCTATTAGTATAAAATATGTGTAAGATTTCTCATTTGTAAATAAGAAAGAAAGTAAGAAATTCAAGTTTAAGAAATATTATTCAATTTGACCAATCTTCTTTTCTTTTTTCTTGATTTTGTATTGTGAGGACTTGTTACGTTTTCAACAAGAGATATGAGAGCTTCGGTTAGATATGACTTCAAAGGGTAACATGTTGCAATCCCAACTTCCAAGGTTTAGCGGGAAGAATTTTAGTCAATATAGTATTCAAATGAAAGTGTTATATGGCTCTCAAGAATTGTGGGTTATTGTTGAAAGAGGATACACTGAAGTTGAGAATCAGAGTGAGCTCACAAATCAACAACTTATTGAGTTAAGAGAAAATCGTAAGAAAGACAAGACGACTTTATTCTTCATTTATCAAGTTGTTGATGAATTTATTTTCGAGAGAATTTCAACAGCTACTTTTGCAAAGGCGACTTGGGATATTCTACAATCTACCTATCAAGGAGAAGATAAAGTAAAAATGATAAGGTTACAAGCTCTCATATCCGAATTTGATTGCATTAAAATGAAAGAAATTGAAACTATTGAAGAATTTTTCAATCGTATTCTTGTAATCGTCAGTAGTTTAAGATCAAATGGTGAAGAAGTGGGCGATCAAAGAGTTGTTGAAAAGAGTCTTAGAAGTATGCCAAGAAAATTTGAGCATATTGTCGTTGCAATTGAAGAATCGAAAAACTTATCTACGTTGTCTATAAATAGCTTGATGGGTTCTCTTCAATCCCATGAGCTAAGATTAAAACAATTTGATGTTAATTCCGAGGAAGCTTTTCAAATGCAAACTTCATTCAGAGGCGGATCAAGGGGAAGTCGTGGCGGTCATGGAAGACGAGGAGGTGGAAGAAACTATGATAATTGA ATGATTTTCATTACTGCTGTGTTACAAGCTCTCATATCCGAATTTGATTGCATTAAAATGAAAGAAATTGAAACTATTGAAGAATTTTTCAATCGTATTCTTGTAATCGTCAGTAGTTTAAGATCAAATGGTGAAGAAGTGGGCGATCAAAGAGTTGTTGAAAAGAGTCTTAGAAGTATGCCAAGAAAATTTGAGCATATTGTCGTTGCAATTGAAGAATCGAAAAACTTATCTACGTTGTCTATAAATAGCTTGATGGGTTCTCTTCAATCCCATGAGCTAAGATTAAAACAATTTGATGTTAATTCCGAGGAAGCTTTTCAAATGCAAACTTCATTCAGAGGCGGATCAAGGGGAAGTCGTGGCGGTCATGGAAGACGAGGAGGTGGAAGAAACTATGATAATTGA ATGATTTTCATTACTGCTGTGTTACAAGCTCTCATATCCGAATTTGATTGCATTAAAATGAAAGAAATTGAAACTATTGAAGAATTTTTCAATCGTATTCTTGTAATCGTCAGTAGTTTAAGATCAAATGGTGAAGAAGTGGGCGATCAAAGAGTTGTTGAAAAGAGTCTTAGAAGTATGCCAAGAAAATTTGAGCATATTGTCGTTGCAATTGAAGAATCGAAAAACTTATCTACGTTGTCTATAAATAGCTTGATGGGTTCTCTTCAATCCCATGAGCTAAGATTAAAACAATTTGATGTTAATTCCGAGGAAGCTTTTCAAATGCAAACTTCATTCAGAGGCGGATCAAGGGGAAGTCGTGGCGGTCATGGAAGACGAGGAGGTGGAAGAAACTATGATAATTGA MIFITAVLQALISEFDCIKMKEIETIEEFFNRILVIVSSLRSNGEEVGDQRVVEKSLRSMPRKFEHIVVAIEESKNLSTLSINSLMGSLQSHELRLKQFDVNSEEAFQMQTSFRGGSRGSRGGHGRRGGGRNYDN* Homology
BLAST of CsGy6G017442 vs. NCBI nr
Match: KAA0052790.1 (integrase [Cucumis melo var. makuwa]) HSP 1 Score: 227 bits (579), Expect = 7.99e-71 Identity = 120/128 (93.75%), Postives = 123/128 (96.09%), Query Frame = 0
BLAST of CsGy6G017442 vs. NCBI nr
Match: TYK07358.1 (integrase [Cucumis melo var. makuwa]) HSP 1 Score: 224 bits (571), Expect = 8.94e-71 Identity = 120/128 (93.75%), Postives = 121/128 (94.53%), Query Frame = 0
BLAST of CsGy6G017442 vs. NCBI nr
Match: XP_008462665.1 (PREDICTED: uncharacterized protein LOC103500968 [Cucumis melo]) HSP 1 Score: 224 bits (571), Expect = 1.01e-70 Identity = 120/128 (93.75%), Postives = 121/128 (94.53%), Query Frame = 0
BLAST of CsGy6G017442 vs. NCBI nr
Match: KAA0065484.1 (integrase [Cucumis melo var. makuwa]) HSP 1 Score: 220 bits (561), Expect = 8.81e-70 Identity = 118/128 (92.19%), Postives = 121/128 (94.53%), Query Frame = 0
BLAST of CsGy6G017442 vs. NCBI nr
Match: KAA0041660.1 (integrase [Cucumis melo var. makuwa]) HSP 1 Score: 223 bits (567), Expect = 2.54e-68 Identity = 119/128 (92.97%), Postives = 121/128 (94.53%), Query Frame = 0
BLAST of CsGy6G017442 vs. ExPASy TrEMBL
Match: A0A5A7UC82 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1614G00010 PE=4 SV=1) HSP 1 Score: 227 bits (579), Expect = 3.87e-71 Identity = 120/128 (93.75%), Postives = 123/128 (96.09%), Query Frame = 0
BLAST of CsGy6G017442 vs. ExPASy TrEMBL
Match: A0A5D3C874 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G00770 PE=4 SV=1) HSP 1 Score: 224 bits (571), Expect = 4.33e-71 Identity = 120/128 (93.75%), Postives = 121/128 (94.53%), Query Frame = 0
BLAST of CsGy6G017442 vs. ExPASy TrEMBL
Match: A0A1S3CHI3 (uncharacterized protein LOC103500968 OS=Cucumis melo OX=3656 GN=LOC103500968 PE=4 SV=1) HSP 1 Score: 224 bits (571), Expect = 4.89e-71 Identity = 120/128 (93.75%), Postives = 121/128 (94.53%), Query Frame = 0
BLAST of CsGy6G017442 vs. ExPASy TrEMBL
Match: A0A5A7VDX5 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G001870 PE=4 SV=1) HSP 1 Score: 220 bits (561), Expect = 4.27e-70 Identity = 118/128 (92.19%), Postives = 121/128 (94.53%), Query Frame = 0
BLAST of CsGy6G017442 vs. ExPASy TrEMBL
Match: A0A5A7TED4 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold93G001410 PE=4 SV=1) HSP 1 Score: 223 bits (567), Expect = 1.23e-68 Identity = 119/128 (92.97%), Postives = 121/128 (94.53%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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