CsGy6G017442.1 (mRNA) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G017442.1
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Integrase
Location	Gy14Chr6: 18177438 .. 18180176 (+)
Sequence length	408
RNA-Seq Expression	CsGy6G017442.1
Synteny	CsGy6G017442.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTTTCATTACTGCTGTGTTATAAATTATAGTTTTTTCTTTTCCTTCAATTTCTGTTCTCTTTTATGTATGTTTTCAATTTCTTCTTGACATCATTCATTAAGTTTCACTGTTTTGGATTGGATGTATATCAGATATGTAATTGGTGATCCATTTCAGTTTCGTTTGAATTCTTTCTTATATGTAAAAATCATGAGATTTTCTTTAAGAAACCGGTCCATAATAAGAGATTTTTTTTTATTCTTGCACGAGAAACAAAGGCTAAATTAAAATAAATCCATAAGTGCATCAGGACATTCCCAATTAAGTTGACACATTGGTATAAGCACTCTCACATCATACTTTAAATTCAATTGTAGATGAATTAATAACAAAGAAGCATACTTGAGAAAATAACATGTTCACTAATCCATTGTCAACATATAATAATTTTAAATATGATCTCGTGGCAAACCATTTTTGTTAGTTTAATTTGAACAGAGACTCAAAAAACGTTGTAGTAACTTACCCATAAATATGTTCGATTCATCTAGTCTCGATTTAGCGAATCACAAAGCATTTAGAAACTTTTCATAGTCTCCTTTTAAGGTTGTGTGAATAAGAATTAATTCTGAACCTCAAGATTTATTTTCAAATAAATATAAGAGAACAATGAATGTGGTGAGTGGTGGCTGTTTTTCTGCATCCACATCTCTTGACTTTACCCTCATTATTTATTTTATATATCCACTTGGTTCATATTCAAACAAAGCTGTTAATGCATGTGTAAGGAGGGTCCCAACTATATACCACACATTGCATTTTATTCCCTTTAACTAAAGTTGGTATTTTCATTGTAATATTCTTTAAATGTCACTAAATTATAAAGTGGAGTTCAACTTCGTTTAAATCAAGTTGAAATTTTTTCTAATGGTCTGGTTGGAAGCACTTAAATTTCCATCCAACCTTTAGTCTAATTCGATAATCATTTAAGTGATTCTGTTTTTCAATTTAAATGCCAATAGATTTAGTATATATGAAAAAACATCAGATATAAACTAGAGATACAATGTTGGTTCAAAAATTATAACAAGGAAATTAACAAAATGAAACAAGCAAAGAAAGAATTGAAGAGAAGTAACACAAGATCAAAATTGGTAATTTTCAATGCTTAACACATACATATGTGAGCTATGTCCGAATAAGGCTGTTCATTAGAGTAAATGAAAAGGATTGCACATTGACAATGTTATCAGTAATCTTGATAGATGACAAGATTAGACTAACCATCACTTAGACTATTCCTAAATAGTTGAAATTTGATTGACTCTCCTTAATATAATTAGCTCCTCTGAATTATTCACTCCATCGTTGTAGTTAAACTACAACGATCTCTTCTCATAAAATGTTGTTTAACACATGACAACCACCAACCTGTCTCACAAGATCAGATCAACGCTGCAAACTCTCCAAGATCAATTTTTATATAAACAGAATATAGCACACAAAGAAGAAGAAAAACTTAAGCAGTCATTCTCTCTGAATACAAACTAAACTTCTTAAATTTCCACCAAGGATGGCGCCCACCTTATTAAGCAAAATAATCTAATTAACCACTAAAGGTAATACAATTAACACACCATAATGTCATGTAATTCATTGATTAATACAAAAAGGAATTAGTTCAATAAGAAAAGAAAATAAATGTTGAAATTAAATTAATCTAAACTTAATACATGAAATTGCATTATTAAATGTGCATGGATAGTTGAGATACATGGAATAGTTAATCACTAAATATATTGATATATAAAGAGTCACATGTATTTATTATTGATGACTTTTAGCTTGCTTTTCTATTAGTATAAAATATGTGTAAGATTTCTCATTTGTAAATAAGAAAGAAAGTAAGAAATTCAAGTTTAAGAAATATTATTCAATTTGACCAATCTTCTTTTCTTTTTTCTTGATTTTGTATTGTGAGGACTTGTTACGTTTTCAACAAGAGATATGAGAGCTTCGGTTAGATATGACTTCAAAGGGTAACATGTTGCAATCCCAACTTCCAAGGTTTAGCGGGAAGAATTTTAGTCAATATAGTATTCAAATGAAAGTGTTATATGGCTCTCAAGAATTGTGGGTTATTGTTGAAAGAGGATACACTGAAGTTGAGAATCAGAGTGAGCTCACAAATCAACAACTTATTGAGTTAAGAGAAAATCGTAAGAAAGACAAGACGACTTTATTCTTCATTTATCAAGTTGTTGATGAATTTATTTTCGAGAGAATTTCAACAGCTACTTTTGCAAAGGCGACTTGGGATATTCTACAATCTACCTATCAAGGAGAAGATAAAGTAAAAATGATAAGGTTACAAGCTCTCATATCCGAATTTGATTGCATTAAAATGAAAGAAATTGAAACTATTGAAGAATTTTTCAATCGTATTCTTGTAATCGTCAGTAGTTTAAGATCAAATGGTGAAGAAGTGGGCGATCAAAGAGTTGTTGAAAAGAGTCTTAGAAGTATGCCAAGAAAATTTGAGCATATTGTCGTTGCAATTGAAGAATCGAAAAACTTATCTACGTTGTCTATAAATAGCTTGATGGGTTCTCTTCAATCCCATGAGCTAAGATTAAAACAATTTGATGTTAATTCCGAGGAAGCTTTTCAAATGCAAACTTCATTCAGAGGCGGATCAAGGGGAAGTCGTGGCGGTCATGGAAGACGAGGAGGTGGAAGAAACTATGATAATTGA

mRNA sequence

ATGATTTTCATTACTGCTGTGTTACAAGCTCTCATATCCGAATTTGATTGCATTAAAATGAAAGAAATTGAAACTATTGAAGAATTTTTCAATCGTATTCTTGTAATCGTCAGTAGTTTAAGATCAAATGGTGAAGAAGTGGGCGATCAAAGAGTTGTTGAAAAGAGTCTTAGAAGTATGCCAAGAAAATTTGAGCATATTGTCGTTGCAATTGAAGAATCGAAAAACTTATCTACGTTGTCTATAAATAGCTTGATGGGTTCTCTTCAATCCCATGAGCTAAGATTAAAACAATTTGATGTTAATTCCGAGGAAGCTTTTCAAATGCAAACTTCATTCAGAGGCGGATCAAGGGGAAGTCGTGGCGGTCATGGAAGACGAGGAGGTGGAAGAAACTATGATAATTGA

Coding sequence (CDS)

ATGATTTTCATTACTGCTGTGTTACAAGCTCTCATATCCGAATTTGATTGCATTAAAATGAAAGAAATTGAAACTATTGAAGAATTTTTCAATCGTATTCTTGTAATCGTCAGTAGTTTAAGATCAAATGGTGAAGAAGTGGGCGATCAAAGAGTTGTTGAAAAGAGTCTTAGAAGTATGCCAAGAAAATTTGAGCATATTGTCGTTGCAATTGAAGAATCGAAAAACTTATCTACGTTGTCTATAAATAGCTTGATGGGTTCTCTTCAATCCCATGAGCTAAGATTAAAACAATTTGATGTTAATTCCGAGGAAGCTTTTCAAATGCAAACTTCATTCAGAGGCGGATCAAGGGGAAGTCGTGGCGGTCATGGAAGACGAGGAGGTGGAAGAAACTATGATAATTGA

Protein sequence

MIFITAVLQALISEFDCIKMKEIETIEEFFNRILVIVSSLRSNGEEVGDQRVVEKSLRSMPRKFEHIVVAIEESKNLSTLSINSLMGSLQSHELRLKQFDVNSEEAFQMQTSFRGGSRGSRGGHGRRGGGRNYDN*

Homology

[Close]

BLAST of CsGy6G017442.1 vs. NCBI nr
Match: KAA0052790.1 (integrase [Cucumis melo var. makuwa])

HSP 1 Score: 227 bits (579), Expect = 7.99e-71
Identity = 120/128 (93.75%), Postives = 123/128 (96.09%), Query Frame = 0


Query: 8   LQALISEFDCIKMKEIETIEEFFNRILVIVSSLRSNGEEVGDQRVVEKSLRSMPRKFEHI 67
           LQAL SEFDCIKMKE ETIEEFFNRILVIV+SLRSNGEEVGDQRVVEK LRSMPRKFEHI
Sbjct: 87  LQALRSEFDCIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHI 146

Query: 68  VVAIEESKNLSTLSINSLMGSLQSHELRLKQFDVNSEEAFQMQTSFRGGSRGSRGGHGRR 127
           +VAIEESK+LSTLSINSLMGSLQSHELRLKQFDVN EEAFQMQTSFRGGSRG RGGHGRR
Sbjct: 147 IVAIEESKDLSTLSINSLMGSLQSHELRLKQFDVNPEEAFQMQTSFRGGSRGRRGGHGRR 206

Query: 128 GGGRNYDN 135
           GGGRNYDN
Sbjct: 207 GGGRNYDN 214

[Close]

BLAST of CsGy6G017442.1 vs. NCBI nr
Match: TYK07358.1 (integrase [Cucumis melo var. makuwa])

HSP 1 Score: 224 bits (571), Expect = 8.94e-71
Identity = 120/128 (93.75%), Postives = 121/128 (94.53%), Query Frame = 0


Query: 8   LQALISEFDCIKMKEIETIEEFFNRILVIVSSLRSNGEEVGDQRVVEKSLRSMPRKFEHI 67
           LQAL SEFDCIKMKE ETIEEFFNRILVIV+SLRSNGEEVGDQRVVEK LRSMPRKFEHI
Sbjct: 76  LQALRSEFDCIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHI 135

Query: 68  VVAIEESKNLSTLSINSLMGSLQSHELRLKQFDVNSEEAFQMQTSFRGGSRGSRGGHGRR 127
           VVAIEESKNLS LSINSLMGSLQSHELRLKQFDVN EEAFQMQTSFRGGSR  RGGHGRR
Sbjct: 136 VVAIEESKNLSMLSINSLMGSLQSHELRLKQFDVNPEEAFQMQTSFRGGSRERRGGHGRR 195

Query: 128 GGGRNYDN 135
           GGGRNYDN
Sbjct: 196 GGGRNYDN 203

[Close]

BLAST of CsGy6G017442.1 vs. NCBI nr
Match: XP_008462665.1 (PREDICTED: uncharacterized protein LOC103500968 [Cucumis melo])

HSP 1 Score: 224 bits (571), Expect = 1.01e-70
Identity = 120/128 (93.75%), Postives = 121/128 (94.53%), Query Frame = 0


Query: 8   LQALISEFDCIKMKEIETIEEFFNRILVIVSSLRSNGEEVGDQRVVEKSLRSMPRKFEHI 67
           LQAL SEFDCIKMKE ETIEEFFNRILVIV+SLRSNGEEVGDQRVVEK LRSMPRKFEHI
Sbjct: 76  LQALRSEFDCIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHI 135

Query: 68  VVAIEESKNLSTLSINSLMGSLQSHELRLKQFDVNSEEAFQMQTSFRGGSRGSRGGHGRR 127
           VVAIEESKNLS LSINSLMGSLQSHELRLKQFDVN EEAFQMQTSFRGGSR  RGGHGRR
Sbjct: 136 VVAIEESKNLSMLSINSLMGSLQSHELRLKQFDVNPEEAFQMQTSFRGGSRERRGGHGRR 195

Query: 128 GGGRNYDN 135
           GGGRNYDN
Sbjct: 196 GGGRNYDN 203

[Close]

BLAST of CsGy6G017442.1 vs. NCBI nr
Match: KAA0065484.1 (integrase [Cucumis melo var. makuwa])

HSP 1 Score: 220 bits (561), Expect = 8.81e-70
Identity = 118/128 (92.19%), Postives = 121/128 (94.53%), Query Frame = 0


Query: 8   LQALISEFDCIKMKEIETIEEFFNRILVIVSSLRSNGEEVGDQRVVEKSLRSMPRKFEHI 67
           LQA+ SEFDCIKMKE ETIEEFFNRILVIV+SLRSNGEEVGDQRVVEK LRSMPRKFEHI
Sbjct: 115 LQAVRSEFDCIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHI 174

Query: 68  VVAIEESKNLSTLSINSLMGSLQSHELRLKQFDVNSEEAFQMQTSFRGGSRGSRGGHGRR 127
           VVAIEESK+LSTLSINSLMGSLQSHELRLKQFDVN EEAFQMQTSFRGGSRG RGGH RR
Sbjct: 175 VVAIEESKDLSTLSINSLMGSLQSHELRLKQFDVNLEEAFQMQTSFRGGSRGRRGGHERR 234

Query: 128 GGGRNYDN 135
           G GRNYDN
Sbjct: 235 GDGRNYDN 242

[Close]

BLAST of CsGy6G017442.1 vs. NCBI nr
Match: KAA0041660.1 (integrase [Cucumis melo var. makuwa])

HSP 1 Score: 223 bits (567), Expect = 2.54e-68
Identity = 119/128 (92.97%), Postives = 121/128 (94.53%), Query Frame = 0


Query: 8   LQALISEFDCIKMKEIETIEEFFNRILVIVSSLRSNGEEVGDQRVVEKSLRSMPRKFEHI 67
           LQAL SEFDCIKMKE ETIEEFFNRILVIV+SLRSNGEEVGDQRVVEK LRSMPRKFEHI
Sbjct: 115 LQALRSEFDCIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHI 174

Query: 68  VVAIEESKNLSTLSINSLMGSLQSHELRLKQFDVNSEEAFQMQTSFRGGSRGSRGGHGRR 127
           VVAIEESK+LSTLSINSLMGSLQSHELRLKQFD N EEAFQMQTSFRGGSRG RGGHG R
Sbjct: 175 VVAIEESKDLSTLSINSLMGSLQSHELRLKQFDDNPEEAFQMQTSFRGGSRGRRGGHGTR 234

Query: 128 GGGRNYDN 135
           GGGRNYDN
Sbjct: 235 GGGRNYDN 242

[Close]

BLAST of CsGy6G017442.1 vs. ExPASy TrEMBL
Match: A0A5A7UC82 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1614G00010 PE=4 SV=1)

HSP 1 Score: 227 bits (579), Expect = 3.87e-71
Identity = 120/128 (93.75%), Postives = 123/128 (96.09%), Query Frame = 0


Query: 8   LQALISEFDCIKMKEIETIEEFFNRILVIVSSLRSNGEEVGDQRVVEKSLRSMPRKFEHI 67
           LQAL SEFDCIKMKE ETIEEFFNRILVIV+SLRSNGEEVGDQRVVEK LRSMPRKFEHI
Sbjct: 87  LQALRSEFDCIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHI 146

Query: 68  VVAIEESKNLSTLSINSLMGSLQSHELRLKQFDVNSEEAFQMQTSFRGGSRGSRGGHGRR 127
           +VAIEESK+LSTLSINSLMGSLQSHELRLKQFDVN EEAFQMQTSFRGGSRG RGGHGRR
Sbjct: 147 IVAIEESKDLSTLSINSLMGSLQSHELRLKQFDVNPEEAFQMQTSFRGGSRGRRGGHGRR 206

Query: 128 GGGRNYDN 135
           GGGRNYDN
Sbjct: 207 GGGRNYDN 214

[Close]

BLAST of CsGy6G017442.1 vs. ExPASy TrEMBL
Match: A0A5D3C874 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G00770 PE=4 SV=1)

HSP 1 Score: 224 bits (571), Expect = 4.33e-71
Identity = 120/128 (93.75%), Postives = 121/128 (94.53%), Query Frame = 0


Query: 8   LQALISEFDCIKMKEIETIEEFFNRILVIVSSLRSNGEEVGDQRVVEKSLRSMPRKFEHI 67
           LQAL SEFDCIKMKE ETIEEFFNRILVIV+SLRSNGEEVGDQRVVEK LRSMPRKFEHI
Sbjct: 76  LQALRSEFDCIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHI 135

Query: 68  VVAIEESKNLSTLSINSLMGSLQSHELRLKQFDVNSEEAFQMQTSFRGGSRGSRGGHGRR 127
           VVAIEESKNLS LSINSLMGSLQSHELRLKQFDVN EEAFQMQTSFRGGSR  RGGHGRR
Sbjct: 136 VVAIEESKNLSMLSINSLMGSLQSHELRLKQFDVNPEEAFQMQTSFRGGSRERRGGHGRR 195

Query: 128 GGGRNYDN 135
           GGGRNYDN
Sbjct: 196 GGGRNYDN 203

[Close]

BLAST of CsGy6G017442.1 vs. ExPASy TrEMBL
Match: A0A1S3CHI3 (uncharacterized protein LOC103500968 OS=Cucumis melo OX=3656 GN=LOC103500968 PE=4 SV=1)

HSP 1 Score: 224 bits (571), Expect = 4.89e-71
Identity = 120/128 (93.75%), Postives = 121/128 (94.53%), Query Frame = 0


Query: 8   LQALISEFDCIKMKEIETIEEFFNRILVIVSSLRSNGEEVGDQRVVEKSLRSMPRKFEHI 67
           LQAL SEFDCIKMKE ETIEEFFNRILVIV+SLRSNGEEVGDQRVVEK LRSMPRKFEHI
Sbjct: 76  LQALRSEFDCIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHI 135

Query: 68  VVAIEESKNLSTLSINSLMGSLQSHELRLKQFDVNSEEAFQMQTSFRGGSRGSRGGHGRR 127
           VVAIEESKNLS LSINSLMGSLQSHELRLKQFDVN EEAFQMQTSFRGGSR  RGGHGRR
Sbjct: 136 VVAIEESKNLSMLSINSLMGSLQSHELRLKQFDVNPEEAFQMQTSFRGGSRERRGGHGRR 195

Query: 128 GGGRNYDN 135
           GGGRNYDN
Sbjct: 196 GGGRNYDN 203

[Close]

BLAST of CsGy6G017442.1 vs. ExPASy TrEMBL
Match: A0A5A7VDX5 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G001870 PE=4 SV=1)

HSP 1 Score: 220 bits (561), Expect = 4.27e-70
Identity = 118/128 (92.19%), Postives = 121/128 (94.53%), Query Frame = 0


Query: 8   LQALISEFDCIKMKEIETIEEFFNRILVIVSSLRSNGEEVGDQRVVEKSLRSMPRKFEHI 67
           LQA+ SEFDCIKMKE ETIEEFFNRILVIV+SLRSNGEEVGDQRVVEK LRSMPRKFEHI
Sbjct: 115 LQAVRSEFDCIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHI 174

Query: 68  VVAIEESKNLSTLSINSLMGSLQSHELRLKQFDVNSEEAFQMQTSFRGGSRGSRGGHGRR 127
           VVAIEESK+LSTLSINSLMGSLQSHELRLKQFDVN EEAFQMQTSFRGGSRG RGGH RR
Sbjct: 175 VVAIEESKDLSTLSINSLMGSLQSHELRLKQFDVNLEEAFQMQTSFRGGSRGRRGGHERR 234

Query: 128 GGGRNYDN 135
           G GRNYDN
Sbjct: 235 GDGRNYDN 242

[Close]

BLAST of CsGy6G017442.1 vs. ExPASy TrEMBL
Match: A0A5A7TED4 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold93G001410 PE=4 SV=1)

HSP 1 Score: 223 bits (567), Expect = 1.23e-68
Identity = 119/128 (92.97%), Postives = 121/128 (94.53%), Query Frame = 0


Query: 8   LQALISEFDCIKMKEIETIEEFFNRILVIVSSLRSNGEEVGDQRVVEKSLRSMPRKFEHI 67
           LQAL SEFDCIKMKE ETIEEFFNRILVIV+SLRSNGEEVGDQRVVEK LRSMPRKFEHI
Sbjct: 115 LQALRSEFDCIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHI 174

Query: 68  VVAIEESKNLSTLSINSLMGSLQSHELRLKQFDVNSEEAFQMQTSFRGGSRGSRGGHGRR 127
           VVAIEESK+LSTLSINSLMGSLQSHELRLKQFD N EEAFQMQTSFRGGSRG RGGHG R
Sbjct: 175 VVAIEESKDLSTLSINSLMGSLQSHELRLKQFDDNPEEAFQMQTSFRGGSRGRRGGHGTR 234

Query: 128 GGGRNYDN 135
           GGGRNYDN
Sbjct: 235 GGGRNYDN 242

The following BLAST results are available for this feature:

BLAST of CsGy6G017442.1 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy6G017442.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0052790.1	7.99e-71	93.75	integrase [Cucumis melo var. makuwa]	[more]
TYK07358.1	8.94e-71	93.75	integrase [Cucumis melo var. makuwa]	[more]
XP_008462665.1	1.01e-70	93.75	PREDICTED: uncharacterized protein LOC103500968 [Cucumis melo]	[more]
KAA0065484.1	8.81e-70	92.19	integrase [Cucumis melo var. makuwa]	[more]
KAA0041660.1	2.54e-68	92.97	integrase [Cucumis melo var. makuwa]	[more]

BLAST of CsGy6G017442.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UC82	3.87e-71	93.75	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1614G00010 PE=...	[more]
A0A5D3C874	4.33e-71	93.75	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G00770 PE=4...	[more]
A0A1S3CHI3	4.89e-71	93.75	uncharacterized protein LOC103500968 OS=Cucumis melo OX=3656 GN=LOC103500968 PE=...	[more]
A0A5A7VDX5	4.27e-70	92.19	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G001870 PE=4...	[more]
A0A5A7TED4	1.23e-68	92.97	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold93G001410 PE=4...	[more]

BLAST of CsGy6G017442.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 10..98 e-value: 1.2E-13 score: 51.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 110..135
None	No IPR available	PANTHER	PTHR34222	FAMILY NOT NAMED	coord: 6..131
None	No IPR available	PANTHER	PTHR34222:SF30	SUBFAMILY NOT NAMED	coord: 6..131

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsGy6G017442	CsGy6G017442	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy6G017442.1.exon1	CsGy6G017442.1.exon1	exon
CsGy6G017442.1.exon2	CsGy6G017442.1.exon2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.CsGy6G017442.1	cds.CsGy6G017442.1	CDS
cds.CsGy6G017442.1	cds.CsGy6G017442.1_2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsGy6G017442.1	CsGy6G017442.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding