CsGy6G006610 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G006610
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Unknown protein
Location	Gy14Chr6: 5698450 .. 5699047 (-)
RNA-Seq Expression	CsGy6G006610
Synteny	CsGy6G006610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGATTTCTCCTTGATTGGGTCTTATAATTACCTTCTTTTCCTTTGGGCTCGAATGTGCCATTAAACAACAAAGGAATTAATTTATAAGCACTTAAAAGAGAGCTAGAAAAAATAGATTTTGTAAAGAGACCAGGGAAAGCCAGTACTGGAAAATTTGGAGGTGTAGTTCATGGGTCTGGGTTTGCGATTGAACCATTGGGGGATGAGCCTGGATCGTCGTTCGTCGGTGGTGTAGTGGGCAGAGTCGTCGATGATCGAATGGGGAAGGTGATCGAGATCAAGGGCAGGGAGGTGACCGAGAATTTGGGTGATGCTAATTTGTTTGGAGCAAAGAAATATGAAGATCAGAAGCAAACATATGACTTGAGTGACCTCTATGTTCCAGTACTCATGAGGGAGAAGACAGAAAACAAAGTTGTTATGAGGACAGTTTAGGATACGCAATAGCATATGCTCACAGGAACAAGTGATGGAGATCAATAGAACACACAACTAATTAGCTGAGCTGTGTGTTAGCTTTACTCTCCTTTTCATTTCCTTTTTCCTTACCCCTTTTTCTTCATTCTGTCAAGTTTTGTGTAATAAAGTTTTTTAAG

mRNA sequence

ATTGATTTCTCCTTGATTGGGTCTTATAATTACCTTCTTTTCCTTTGGGCTCGAATGTGCCATTAAACAACAAAGGAATTAATTTATAAGCACTTAAAAGAGAGCTAGAAAAAATAGATTTTGTAAAGAGACCAGGGAAAGCCAGTACTGGAAAATTTGGAGGTGTAGTTCATGGGTCTGGGTTTGCGATTGAACCATTGGGGGATGAGCCTGGATCGTCGTTCGTCGGTGGTGTAGTGGGCAGAGTCGTCGATGATCGAATGGGGAAGGTGATCGAGATCAAGGGCAGGGAGGTGACCGAGAATTTGGGTGATGCTAATTTGTTTGGAGCAAAGAAATATGAAGATCAGAAGCAAACATATGACTTGAGTGACCTCTATGTTCCAGTACTCATGAGGGAGAAGACAGAAAACAAAGTTGTTATGAGGACAGTTTAGGATACGCAATAGCATATGCTCACAGGAACAAGTGATGGAGATCAATAGAACACACAACTAATTAGCTGAGCTGTGTGTTAGCTTTACTCTCCTTTTCATTTCCTTTTTCCTTACCCCTTTTTCTTCATTCTGTCAAGTTTTGTGTAATAAAGTTTTTTAAG

Coding sequence (CDS)

ATGGGGAAGGTGATCGAGATCAAGGGCAGGGAGGTGACCGAGAATTTGGGTGATGCTAATTTGTTTGGAGCAAAGAAATATGAAGATCAGAAGCAAACATATGACTTGAGTGACCTCTATGTTCCAGTACTCATGAGGGAGAAGACAGAAAACAAAGTTGTTATGAGGACAGTTTAG

Protein sequence

MGKVIEIKGREVTENLGDANLFGAKKYEDQKQTYDLSDLYVPVLMREKTENKVVMRTV*

Homology

[Close]

BLAST of CsGy6G006610 vs. NCBI nr
Match: KGN46325.1 (hypothetical protein Csa_005279 [Cucumis sativus])

HSP 1 Score: 117 bits (292), Expect = 7.03e-33
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0


Query: 1  MGKVIEIKGREVTENLGDANLFGAKKYEDQKQTYDLSDLYVPVLMREKTENKVVMRTV 58
          MGKVIEIKGREVTENLGDANLFGAKKYEDQKQTYDLSDLYVPVLMREKTENKVVMRTV
Sbjct: 1  MGKVIEIKGREVTENLGDANLFGAKKYEDQKQTYDLSDLYVPVLMREKTENKVVMRTV 58

[Close]

BLAST of CsGy6G006610 vs. ExPASy TrEMBL
Match: A0A0A0K980 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G084590 PE=4 SV=1)

HSP 1 Score: 117 bits (292), Expect = 3.40e-33
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0


Query: 1  MGKVIEIKGREVTENLGDANLFGAKKYEDQKQTYDLSDLYVPVLMREKTENKVVMRTV 58
          MGKVIEIKGREVTENLGDANLFGAKKYEDQKQTYDLSDLYVPVLMREKTENKVVMRTV
Sbjct: 1  MGKVIEIKGREVTENLGDANLFGAKKYEDQKQTYDLSDLYVPVLMREKTENKVVMRTV 58

The following BLAST results are available for this feature:

BLAST of CsGy6G006610 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy6G006610 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN46325.1	7.03e-33	100.00	hypothetical protein Csa_005279 [Cucumis sativus]	[more]

BLAST of CsGy6G006610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K980	3.40e-33	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G084590 PE=4 SV=1	[more]

BLAST of CsGy6G006610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G006610.2	CsGy6G006610.2	mRNA