Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. ATTGATTTCTCCTTGATTGGGTCTTATAATTACCTTCTTTTCCTTTGGGCTCGAATGTGCCATTAAACAACAAAGGAATTAATTTATAAGCACTTAAAAGAGAGCTAGAAAAAATAGATTTTGTAAAGAGACCAGGGAAAGCCAGTACTGGAAAATTTGGAGGTGTAGTTCATGGGTCTGGGTTTGCGATTGAACCATTGGGGGATGAGCCTGGATCGTCGTTCGTCGGTGGTGTAGTGGGCAGAGTCGTCGATGATCGAATGGGGAAGGTGATCGAGATCAAGGGCAGGGAGGTGACCGAGAATTTGGGTGATGCTAATTTGTTTGGAGCAAAGAAATATGAAGATCAGAAGCAAACATATGACTTGAGTGACCTCTATGTTCCAGTACTCATGAGGGAGAAGACAGAAAACAAAGTTGTTATGAGGACAGTTTAGGATACGCAATAGCATATGCTCACAGGAACAAGTGATGGAGATCAATAGAACACACAACTAATTAGCTGAGCTGTGTGTTAGCTTTACTCTCCTTTTCATTTCCTTTTTCCTTACCCCTTTTTCTTCATTCTGTCAAGTTTTGTGTAATAAAGTTTTTTAAG mRNA sequence ATTGATTTCTCCTTGATTGGGTCTTATAATTACCTTCTTTTCCTTTGGGCTCGAATGTGCCATTAAACAACAAAGGAATTAATTTATAAGCACTTAAAAGAGAGCTAGAAAAAATAGATTTTGTAAAGAGACCAGGGAAAGCCAGTACTGGAAAATTTGGAGGTGTAGTTCATGGGTCTGGGTTTGCGATTGAACCATTGGGGGATGAGCCTGGATCGTCGTTCGTCGGTGGTGTAGTGGGCAGAGTCGTCGATGATCGAATGGGGAAGGTGATCGAGATCAAGGGCAGGGAGGTGACCGAGAATTTGGGTGATGCTAATTTGTTTGGAGCAAAGAAATATGAAGATCAGAAGCAAACATATGACTTGAGTGACCTCTATGTTCCAGTACTCATGAGGGAGAAGACAGAAAACAAAGTTGTTATGAGGACAGTTTAGGATACGCAATAGCATATGCTCACAGGAACAAGTGATGGAGATCAATAGAACACACAACTAATTAGCTGAGCTGTGTGTTAGCTTTACTCTCCTTTTCATTTCCTTTTTCCTTACCCCTTTTTCTTCATTCTGTCAAGTTTTGTGTAATAAAGTTTTTTAAG Coding sequence (CDS) ATGGGGAAGGTGATCGAGATCAAGGGCAGGGAGGTGACCGAGAATTTGGGTGATGCTAATTTGTTTGGAGCAAAGAAATATGAAGATCAGAAGCAAACATATGACTTGAGTGACCTCTATGTTCCAGTACTCATGAGGGAGAAGACAGAAAACAAAGTTGTTATGAGGACAGTTTAG Protein sequence MGKVIEIKGREVTENLGDANLFGAKKYEDQKQTYDLSDLYVPVLMREKTENKVVMRTV*
Homology
BLAST of CsGy6G006610.2 vs. NCBI nr
Match: KGN46325.1 (hypothetical protein Csa_005279 [Cucumis sativus]) HSP 1 Score: 117 bits (292), Expect = 7.03e-33 Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0
Query: 1 MGKVIEIKGREVTENLGDANLFGAKKYEDQKQTYDLSDLYVPVLMREKTENKVVMRTV 58
MGKVIEIKGREVTENLGDANLFGAKKYEDQKQTYDLSDLYVPVLMREKTENKVVMRTV
Sbjct: 1 MGKVIEIKGREVTENLGDANLFGAKKYEDQKQTYDLSDLYVPVLMREKTENKVVMRTV 58
BLAST of CsGy6G006610.2 vs. ExPASy TrEMBL
Match: A0A0A0K980 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G084590 PE=4 SV=1) HSP 1 Score: 117 bits (292), Expect = 3.40e-33 Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0
Query: 1 MGKVIEIKGREVTENLGDANLFGAKKYEDQKQTYDLSDLYVPVLMREKTENKVVMRTV 58
MGKVIEIKGREVTENLGDANLFGAKKYEDQKQTYDLSDLYVPVLMREKTENKVVMRTV
Sbjct: 1 MGKVIEIKGREVTENLGDANLFGAKKYEDQKQTYDLSDLYVPVLMREKTENKVVMRTV 58
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| KGN46325.1 | 7.03e-33 | 100.00 | hypothetical protein Csa_005279 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0K980 | 3.40e-33 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G084590 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CsGy6G006610.2.exon1 | CsGy6G006610.2.exon1 | exon |
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CsGy6G006610.2.utr3p1 | CsGy6G006610.2.utr3p1 | three_prime_UTR |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| cds.CsGy6G006610.2 | cds.CsGy6G006610.2 | CDS |
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CsGy6G006610.2.utr5p1 | CsGy6G006610.2.utr5p1 | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CsGy6G006610.2 | CsGy6G006610.2-protein | polypeptide |
|
