Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCGGGCAACTGGTCGGATCAGGAATGGGACCGATTCCTCGGGGGGAGGGTTTCTTAAGGCCACTTTCAGATTCTTGAAGATGGCGGAGTTTGAGATCCTTTTCGTTCTCTTCTTCATCGTAGCTTTTATTGTCTTCAAAGATCTTGTAAGTCTCTCCCTTATTCGTTTCTTCTTTTTCTCCCTCTGTCATAAAGCTTATTTATTGCCTCAATTGGATTGGATCCGGCGGTGTAGATCGGAATGACAGTTGTAGGGAAACCCGTTTGATCTTTTTTTCGTTGTTTGGTGATCTTGTTATCACAAGTTATCACCCTCCTCGATGAATCTAGTTACTGGTTTGGACAACTTATGAAAACATTAGGAATCTTCGCTAGTTTTGGAAGTCAAATACATATTCTTTGGGAGCTTCTGTCTTTTTAGTTTCCAGAATTTGGCTAACTAGAAGGTAAAAAATGTTTTTGAAAGTAGATTAGAAAACTAGGAAGAAATTTATGTCAGTATGATTTCAAAATTAAATGAAAGAAAGAATTAGAGAATAGCCCCTGCTTCAATCACCAATCGACCTAAAAGGGTGAAGCTAGTGAGTGAAGGTAAATTTAATATAATGTCTAACACTCCCTCACTTGTAGACTTGAATTACGAAGAAAGACCCAATAAGTGAGAATCTATGTTAAATGAGGAGGAAACAACATTGTAAGGGCTTGAACCGAGGATATCCTGAAGTAAACTGCTAATACCATTTTAAATCACCGATCAACCCAAAAGTTTAAGCAAGTGGGTAAAGAAAAAATTAATTATATATCATCTAACACCCTTGGATATTCCACTAAAGAAACGTTGTGCCATTTTACAAGCCATTTATCAAGGGTACAGAGAAGTTGAAAAGATTTGTGGGTGTAATGGTTGATTTGGCTACTAACGTTGGCTTATCATCTTTCCTAATCGGATCATTGAACGTTTAAGAATGCCCCTTGGTACCAACCTTTACATTTGTGATGGCAAAAATTGCAAATTGAGCTTTCTGAAATGGCAGAACTTGCAGTTGTTGCTATCTCGCTTTAGTCAAGTTGATGGTTGCTAGTGTTCCTGCCTATGTTCTTCTGATGTTTAGAATTCTTCCCATTGTGATTGAGAACATGGAGAAGTCCTATTAGAAAATTTGCACAGAAAGCAATCGATTGCAATTATGATCGCTACTACTGCATTAGATGGAAAATTGTTGTTTCTAATTGTGGAGAAAGGTCTCATATCAGGCACATTAGAAAGCAGATTAAAGCTAGCCAATGGATTTACCATTTTAAAAAATAAAACCATTCCAAGCAAGTGCATAAAGATCCTTGGGGCTGGAAAATAGGTGGGTTTTTGCTATAGTCATTGTAAAATACTGGTTTTCTCATTGAAGGTTGTCAGTCAAGTGAATAGAAGGGCTTTGGTTAAATTTTTAGAAGATCTCTGTATGGGTTGGGAATATCACTCAAGTTTATCCTTCCCTAGGCAATAGGCTTTATTTCAGTGTAGAGAATGAACTGTTAAATACTGGTATGGGGGAATTTAGCAAGAGATAAAGGGAGGGGGCCAAAGATAGGAATGATATCTCTATTCAGCTATGGTACAAGTATGAATATCCAAGTATTCACAATATAGAAGGAACTAAAGTAATATTTTTGATGGGTAAGAAGGTCAGTCCATAACTGGTGATCTGTAATAGTAATTAGTAACTACACAAAGGAAACTGGGCGACATAAATGGCTTAAGTAAACAAATTATATTTTTGACACTTTCCAGCAAGCTGAGCTATAGATGTTGATTGACCCGTCCTGCTTTTTGTTGATTCACGTCACCATGTGATTAGGATTTTTCATACACATAGTATCATGTGATAGATCTTTGAACAATTGTTGGTCTACCCATCTGCATCCAGTATACATCCAAATGTTGTTGGGAAAATAGTGAAGATTATACTGTTGCAGTGAAATTGTAGGATAGTTTAAAAAGGAGTTCGGAAACTTATTGTCCTCAGGAGCATTCAGCTAATTCCTTTTATTTGGACTTTGGAATATGGTGTAGTTTCATGGGAGATTTGCTCAATGAAATCAGAGAAGAACCTCAAACGCCTAAAGGTGATTATTGAAGAGACCGCCAATTAAAAACTAAAAATGATAAACTATAATGATTGAAAGGGGGCTTTGTTTATTGCTTCCTCCAACTTTGAGGTTGGTTTTCGTTTTGTAATTATGAGTATGGATTCTTGAAGAAGGGTATGTTTTGATACTTTTTAGAAAAAGATGAAGGGAGTGAGAGTGATTTTTTAAAGAGAAATGATTTTGTAATCATGGTTTCAATTGGGTAAAGAATATGAGCCTAAATATACTAAGTATTCACAATACAGAAGGAAAAGATTTGTGACCAAGGAAATAAAATATGTTTAATGAATATGAGAGGTTCCCTGTCTTTTGTTGTTCCAATGGCAATTACATAAAGGAGAACGGTCCAATTTTTAATTGTAACGTGGAACTTTATTTTTGTAAGAATTTCATGGGTTTAGAGTGAAGATTGAATTGTTCTGAAAAGATCTTGGAATTCTTCTCTCTTCTTCAATGTAAGATCAAAGGGTATTGCTCACCCGTGTCATTCCCTTTCTTTAGAATCACTATTCATAAGATATTGTTGTGAATACCATCACTCATTTCTTTTCAAGGTCATTTGGAAAGTGAGGTGTCCTTCAAGTAACACTTCATCGTAGCACCAATGCTAACTGAAAAGCATTTTTTGTCACCTCGTTTGGATAGTGTTTGGCCATAGGTTGATGTCCTATCCTATCTCTTTCTTTTTAGCAGTGATGAAACTTTCTGTTCTTGATAAAAGGAAAATTAAAAATGACAATGATAATAATAATAATAATTAGGCAAAATTAATTTGGTGAAGCGAAATATCTATATACTGCATTTAGAAATAGTACACTTGAGTCTTTTGCTTGTCAAGACCAGAAAGGCCATTGCTGAGGTGTAGTCAGTTTGAGACAGGATACATGCATTTAATGGACAAAATCTTCCTATCTTGGATTTTCTTGGATAAGAACTGTTGGAAATTCTTATGTTGCTCGCCACGTAGGCATCAACATTGTAGATTAATTTCATCGTTTACTTGTCTTGTAAAATCATTCTTCTTTTTCAATAACAATCCTTAGATAGATTCAGTGTTTATTATCCATTTTTTGGTGCCGAAGTTAGTTATGATGTCTGACTGATATTCATGAGCATGGCGTTATTTATTCCAAAGCAAAGTAGCAATAAATCGTATTTGGGACAATGGACATAAATGACATCGGTTTGAAAGGACTTTTTATAATTATTCTCTTAGTCTTATCATTTGGGATTAAAGCCTGCCCGATTACATCTTGTTAAGGTGTTAGGTTCTGTTTTGGACTTTGCTTTCTTGCATTCCACTTTTGTATTCTTTTTATCTCACTTGCATTAACAGCCATGTCATGGAATTAGCATATGACTCCACACTGAATACAATACTTTTTAGGTCATCTAGATTTTATTTTTAGTTCCACACTTTTAATCCTTTTATATATTTTAATTGGTTACTTTTGAATTAAAAAAAATGATCTTGGGGCCTCATGCCCAAGCTTCGGTCATGGTCATGGCCTTGTCATGTCCACGAGTGTACAGGAACTAATCTTTGTAATAAATTATTCATGTAATATCTATTCTAGCACGAACACATCTTTTGTTGCTTGCTTGCGTATCATTAGATCATGAACATTCTCATCTATCTTTTTCTGATTATTCTCCCTCTATTGATGTGCAAATACTACGGGCTTATGGCCTTGTATGTGCAAATAGCATGGGCTTATTGGCTTGTTTGGTAGGGAATCTCAAAACAAAAATTAAAATACAAGAGATTTCATGTTTTCGAATATTTGTTTTTAGCCGATTCCGAAATTGAATTCTAATCTAAACAATGGTTTAAAATTTTTGATAATATAGTTAAAAATCATTATTTAAACTAGTTATAGTTAACCCACTATTAGTTGACAATGATTTGTTATTGATTTCTTTAGAAACATGCTTTATGTTAAAAAAAAATTACAATTATTATTAATTTATTATACATTACATAATACATATTTTAATCTTTTTAGAAAATATGAATTTGAACTTACAACATGACATACGGTATCTAGAAAATCTAAATGTGTTTATCTTTTTTTAATATAACTATGCATTTTAAAATTTAAAATTCAAAATCTGGATAAAATAAGAATACAATTATGTTATTTTTAGAATTTGCACACATAAACTTTCTAAGAAACAGTTTTCAAAAATAGATTTTGAATTATCTGTTAAACATTTGATAAACTCTAAAAGGATAAAGCAGAATTTGTATCGTAAGCTATACATGTCCTAAGCGATTCTAATAACGTGGGAATCAATTGTGCAGACATCAAGACCAGAGTACAACCAAATTCTTGTAAAGAAGCCTGAGGGATTTGATATGTGGCCATTCCAGTAAATTCTCGACTTCCCATTCATGTGATCCGATTCAATACTCACTCTCAAACTTTCTAAGTTTGTATCTTTTTATGTTGATGTGCAGGATGATGTAA
mRNA sequence
ATGGCTCGGGCAACTGGTCGGATCAGGAATGGGACCGATTCCTCGGGGGGAGGGTTTCTTAAGGCCACTTTCAGATTCTTGAAGATGGCGGAGTTTGAGATCCTTTTCGTTCTCTTCTTCATCGTAGCTTTTATTGTCTTCAAAGATCTTACATCAAGACCAGAGTACAACCAAATTCTTGTAAAGAAGCCTGAGGGATTTGATATGTGGCCATTCCAGATGATGTAA
Coding sequence (CDS)
ATGGCTCGGGCAACTGGTCGGATCAGGAATGGGACCGATTCCTCGGGGGGAGGGTTTCTTAAGGCCACTTTCAGATTCTTGAAGATGGCGGAGTTTGAGATCCTTTTCGTTCTCTTCTTCATCGTAGCTTTTATTGTCTTCAAAGATCTTACATCAAGACCAGAGTACAACCAAATTCTTGTAAAGAAGCCTGAGGGATTTGATATGTGGCCATTCCAGATGATGTAA
Protein sequence
MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQMM*
Homology
BLAST of CsGy5G013360 vs. NCBI nr
Match:
XP_011655131.2 (uncharacterized protein LOC101207856 [Cucumis sativus] >KGN50894.1 hypothetical protein Csa_023128 [Cucumis sativus])
HSP 1 Score: 151 bits (381), Expect = 5.95e-46
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0
Query: 1 MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60
MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL
Sbjct: 1 MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60
Query: 61 VKKPEGFDMWPFQMM 75
VKKPEGFDMWPFQMM
Sbjct: 61 VKKPEGFDMWPFQMM 75
BLAST of CsGy5G013360 vs. NCBI nr
Match:
XP_008463128.1 (PREDICTED: uncharacterized protein LOC103501353 [Cucumis melo])
HSP 1 Score: 142 bits (357), Expect = 2.59e-42
Identity = 70/73 (95.89%), Postives = 72/73 (98.63%), Query Frame = 0
Query: 1 MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60
MARA+GR RNG+DSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL
Sbjct: 1 MARASGRSRNGSDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60
Query: 61 VKKPEGFDMWPFQ 73
VKKPEGFDMWPFQ
Sbjct: 61 VKKPEGFDMWPFQ 73
BLAST of CsGy5G013360 vs. NCBI nr
Match:
KAG6579058.1 (hypothetical protein SDJN03_23506, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 130 bits (328), Expect = 1.56e-37
Identity = 65/73 (89.04%), Postives = 67/73 (91.78%), Query Frame = 0
Query: 1 MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60
MARA GR R+G + SGGGFLKA FR LKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL
Sbjct: 29 MARAGGRSRSGNEPSGGGFLKAVFRLLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 88
Query: 61 VKKPEGFDMWPFQ 73
VKKPEGFDMWPFQ
Sbjct: 89 VKKPEGFDMWPFQ 101
BLAST of CsGy5G013360 vs. NCBI nr
Match:
XP_022938472.1 (uncharacterized protein LOC111444698 [Cucurbita moschata] >KAG7016589.1 hypothetical protein SDJN02_21699 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 129 bits (324), Expect = 2.81e-37
Identity = 64/73 (87.67%), Postives = 66/73 (90.41%), Query Frame = 0
Query: 1 MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60
MARA GR R+G + SGGGFLKA FR LKM EFEILFVLFFIVAFIVFKDLTSRPEYNQIL
Sbjct: 1 MARAGGRSRSGNEPSGGGFLKAVFRLLKMVEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60
Query: 61 VKKPEGFDMWPFQ 73
VKKPEGFDMWPFQ
Sbjct: 61 VKKPEGFDMWPFQ 73
BLAST of CsGy5G013360 vs. NCBI nr
Match:
XP_023549700.1 (uncharacterized protein LOC111808120 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 129 bits (324), Expect = 2.81e-37
Identity = 65/73 (89.04%), Postives = 67/73 (91.78%), Query Frame = 0
Query: 1 MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60
MARA GR R+ + SGGGFLKA FRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL
Sbjct: 1 MARAGGRSRSVNELSGGGFLKAVFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60
Query: 61 VKKPEGFDMWPFQ 73
VKKPEGFDMWPFQ
Sbjct: 61 VKKPEGFDMWPFQ 73
BLAST of CsGy5G013360 vs. ExPASy TrEMBL
Match:
A0A0A0KPT8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G315390 PE=4 SV=1)
HSP 1 Score: 151 bits (381), Expect = 2.88e-46
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0
Query: 1 MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60
MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL
Sbjct: 1 MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60
Query: 61 VKKPEGFDMWPFQMM 75
VKKPEGFDMWPFQMM
Sbjct: 61 VKKPEGFDMWPFQMM 75
BLAST of CsGy5G013360 vs. ExPASy TrEMBL
Match:
A0A1S3CK24 (uncharacterized protein LOC103501353 OS=Cucumis melo OX=3656 GN=LOC103501353 PE=4 SV=1)
HSP 1 Score: 142 bits (357), Expect = 1.25e-42
Identity = 70/73 (95.89%), Postives = 72/73 (98.63%), Query Frame = 0
Query: 1 MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60
MARA+GR RNG+DSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL
Sbjct: 1 MARASGRSRNGSDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60
Query: 61 VKKPEGFDMWPFQ 73
VKKPEGFDMWPFQ
Sbjct: 61 VKKPEGFDMWPFQ 73
BLAST of CsGy5G013360 vs. ExPASy TrEMBL
Match:
A0A6J1FE48 (uncharacterized protein LOC111444698 OS=Cucurbita moschata OX=3662 GN=LOC111444698 PE=4 SV=1)
HSP 1 Score: 129 bits (324), Expect = 1.36e-37
Identity = 64/73 (87.67%), Postives = 66/73 (90.41%), Query Frame = 0
Query: 1 MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60
MARA GR R+G + SGGGFLKA FR LKM EFEILFVLFFIVAFIVFKDLTSRPEYNQIL
Sbjct: 1 MARAGGRSRSGNEPSGGGFLKAVFRLLKMVEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60
Query: 61 VKKPEGFDMWPFQ 73
VKKPEGFDMWPFQ
Sbjct: 61 VKKPEGFDMWPFQ 73
BLAST of CsGy5G013360 vs. ExPASy TrEMBL
Match:
A0A6J1K0Z3 (uncharacterized protein LOC111489659 OS=Cucurbita maxima OX=3661 GN=LOC111489659 PE=4 SV=1)
HSP 1 Score: 129 bits (323), Expect = 1.93e-37
Identity = 64/73 (87.67%), Postives = 66/73 (90.41%), Query Frame = 0
Query: 1 MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60
MA A GR R+G + SGGGFLK FRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL
Sbjct: 1 MALAGGRSRSGNEPSGGGFLKTVFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60
Query: 61 VKKPEGFDMWPFQ 73
VKKPEGFDMWPFQ
Sbjct: 61 VKKPEGFDMWPFQ 73
BLAST of CsGy5G013360 vs. ExPASy TrEMBL
Match:
A0A6J1CIZ9 (uncharacterized protein LOC111011789 OS=Momordica charantia OX=3673 GN=LOC111011789 PE=4 SV=1)
HSP 1 Score: 124 bits (312), Expect = 9.76e-36
Identity = 61/73 (83.56%), Postives = 65/73 (89.04%), Query Frame = 0
Query: 1 MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60
MAR GR RNG DS+ GFLKA RFLKMAEFEILF+LFF+VAFI+FKDLTSRPEYNQIL
Sbjct: 1 MARTGGRSRNGNDSAVVGFLKAVLRFLKMAEFEILFILFFVVAFILFKDLTSRPEYNQIL 60
Query: 61 VKKPEGFDMWPFQ 73
VKKPEGFDMWPFQ
Sbjct: 61 VKKPEGFDMWPFQ 73
BLAST of CsGy5G013360 vs. TAIR 10
Match:
AT3G14430.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 16 Blast hits to 16 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 80.1 bits (196), Expect = 8.5e-16
Identity = 34/54 (62.96%), Postives = 46/54 (85.19%), Query Frame = 0
Query: 19 FLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPF 73
F+ + F F ++AEFEILFVLF ++ +++FKDLTSRPEYN+ILV+KP G D+WPF
Sbjct: 23 FVDSVFYFFRLAEFEILFVLFMLITYVIFKDLTSRPEYNRILVEKPGGSDIWPF 76
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| XP_011655131.2 | 5.95e-46 | 100.00 | uncharacterized protein LOC101207856 [Cucumis sativus] >KGN50894.1 hypothetical ... | [more] |
| XP_008463128.1 | 2.59e-42 | 95.89 | PREDICTED: uncharacterized protein LOC103501353 [Cucumis melo] | [more] |
| KAG6579058.1 | 1.56e-37 | 89.04 | hypothetical protein SDJN03_23506, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| XP_022938472.1 | 2.81e-37 | 87.67 | uncharacterized protein LOC111444698 [Cucurbita moschata] >KAG7016589.1 hypothet... | [more] |
| XP_023549700.1 | 2.81e-37 | 89.04 | uncharacterized protein LOC111808120 [Cucurbita pepo subsp. pepo] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0KPT8 | 2.88e-46 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G315390 PE=4 SV=1 | [more] |
| A0A1S3CK24 | 1.25e-42 | 95.89 | uncharacterized protein LOC103501353 OS=Cucumis melo OX=3656 GN=LOC103501353 PE=... | [more] |
| A0A6J1FE48 | 1.36e-37 | 87.67 | uncharacterized protein LOC111444698 OS=Cucurbita moschata OX=3662 GN=LOC1114446... | [more] |
| A0A6J1K0Z3 | 1.93e-37 | 87.67 | uncharacterized protein LOC111489659 OS=Cucurbita maxima OX=3661 GN=LOC111489659... | [more] |
| A0A6J1CIZ9 | 9.76e-36 | 83.56 | uncharacterized protein LOC111011789 OS=Momordica charantia OX=3673 GN=LOC111011... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT3G14430.1 | 8.5e-16 | 62.96 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response... | [more] |
