CsGy5G013360.2 (mRNA) Cucumber (Gy14) v2.1

Overview


Name	CsGy5G013360.2
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	GRIP/coiled-coil protein
Location	Gy14Chr5: 17184930 .. 17189549 (-)
Sequence length	228
RNA-Seq Expression	CsGy5G013360.2
Synteny	CsGy5G013360.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCGGGCAACTGGTCGGATCAGGAATGGGACCGATTCCTCGGGGGGAGGGTTTCTTAAGGCCACTTTCAGATTCTTGAAGATGGCGGAGTTTGAGATCCTTTTCGTTCTCTTCTTCATCGTAGCTTTTATTGTCTTCAAAGATCTTGTAAGTCTCTCCCTTATTCGTTTCTTCTTTTTCTCCCTCTGTCATAAAGCTTATTTATTGCCTCAATTGGATTGGATCCGGCGGTGTAGATCGGAATGACAGTTGTAGGGAAACCCGTTTGATCTTTTTTTCGTTGTTTGGTGATCTTGTTATCACAAGTTATCACCCTCCTCGATGAATCTAGTTACTGGTTTGGACAACTTATGAAAACATTAGGAATCTTCGCTAGTTTTGGAAGTCAAATACATATTCTTTGGGAGCTTCTGTCTTTTTAGTTTCCAGAATTTGGCTAACTAGAAGGTAAAAAATGTTTTTGAAAGTAGATTAGAAAACTAGGAAGAAATTTATGTCAGTATGATTTCAAAATTAAATGAAAGAAAGAATTAGAGAATAGCCCCTGCTTCAATCACCAATCGACCTAAAAGGGTGAAGCTAGTGAGTGAAGGTAAATTTAATATAATGTCTAACACTCCCTCACTTGTAGACTTGAATTACGAAGAAAGACCCAATAAGTGAGAATCTATGTTAAATGAGGAGGAAACAACATTGTAAGGGCTTGAACCGAGGATATCCTGAAGTAAACTGCTAATACCATTTTAAATCACCGATCAACCCAAAAGTTTAAGCAAGTGGGTAAAGAAAAAATTAATTATATATCATCTAACACCCTTGGATATTCCACTAAAGAAACGTTGTGCCATTTTACAAGCCATTTATCAAGGGTACAGAGAAGTTGAAAAGATTTGTGGGTGTAATGGTTGATTTGGCTACTAACGTTGGCTTATCATCTTTCCTAATCGGATCATTGAACGTTTAAGAATGCCCCTTGGTACCAACCTTTACATTTGTGATGGCAAAAATTGCAAATTGAGCTTTCTGAAATGGCAGAACTTGCAGTTGTTGCTATCTCGCTTTAGTCAAGTTGATGGTTGCTAGTGTTCCTGCCTATGTTCTTCTGATGTTTAGAATTCTTCCCATTGTGATTGAGAACATGGAGAAGTCCTATTAGAAAATTTGCACAGAAAGCAATCGATTGCAATTATGATCGCTACTACTGCATTAGATGGAAAATTGTTGTTTCTAATTGTGGAGAAAGGTCTCATATCAGGCACATTAGAAAGCAGATTAAAGCTAGCCAATGGATTTACCATTTTAAAAAATAAAACCATTCCAAGCAAGTGCATAAAGATCCTTGGGGCTGGAAAATAGGTGGGTTTTTGCTATAGTCATTGTAAAATACTGGTTTTCTCATTGAAGGTTGTCAGTCAAGTGAATAGAAGGGCTTTGGTTAAATTTTTAGAAGATCTCTGTATGGGTTGGGAATATCACTCAAGTTTATCCTTCCCTAGGCAATAGGCTTTATTTCAGTGTAGAGAATGAACTGTTAAATACTGGTATGGGGGAATTTAGCAAGAGATAAAGGGAGGGGGCCAAAGATAGGAATGATATCTCTATTCAGCTATGGTACAAGTATGAATATCCAAGTATTCACAATATAGAAGGAACTAAAGTAATATTTTTGATGGGTAAGAAGGTCAGTCCATAACTGGTGATCTGTAATAGTAATTAGTAACTACACAAAGGAAACTGGGCGACATAAATGGCTTAAGTAAACAAATTATATTTTTGACACTTTCCAGCAAGCTGAGCTATAGATGTTGATTGACCCGTCCTGCTTTTTGTTGATTCACGTCACCATGTGATTAGGATTTTTCATACACATAGTATCATGTGATAGATCTTTGAACAATTGTTGGTCTACCCATCTGCATCCAGTATACATCCAAATGTTGTTGGGAAAATAGTGAAGATTATACTGTTGCAGTGAAATTGTAGGATAGTTTAAAAAGGAGTTCGGAAACTTATTGTCCTCAGGAGCATTCAGCTAATTCCTTTTATTTGGACTTTGGAATATGGTGTAGTTTCATGGGAGATTTGCTCAATGAAATCAGAGAAGAACCTCAAACGCCTAAAGGTGATTATTGAAGAGACCGCCAATTAAAAACTAAAAATGATAAACTATAATGATTGAAAGGGGGCTTTGTTTATTGCTTCCTCCAACTTTGAGGTTGGTTTTCGTTTTGTAATTATGAGTATGGATTCTTGAAGAAGGGTATGTTTTGATACTTTTTAGAAAAAGATGAAGGGAGTGAGAGTGATTTTTTAAAGAGAAATGATTTTGTAATCATGGTTTCAATTGGGTAAAGAATATGAGCCTAAATATACTAAGTATTCACAATACAGAAGGAAAAGATTTGTGACCAAGGAAATAAAATATGTTTAATGAATATGAGAGGTTCCCTGTCTTTTGTTGTTCCAATGGCAATTACATAAAGGAGAACGGTCCAATTTTTAATTGTAACGTGGAACTTTATTTTTGTAAGAATTTCATGGGTTTAGAGTGAAGATTGAATTGTTCTGAAAAGATCTTGGAATTCTTCTCTCTTCTTCAATGTAAGATCAAAGGGTATTGCTCACCCGTGTCATTCCCTTTCTTTAGAATCACTATTCATAAGATATTGTTGTGAATACCATCACTCATTTCTTTTCAAGGTCATTTGGAAAGTGAGGTGTCCTTCAAGTAACACTTCATCGTAGCACCAATGCTAACTGAAAAGCATTTTTTGTCACCTCGTTTGGATAGTGTTTGGCCATAGGTTGATGTCCTATCCTATCTCTTTCTTTTTAGCAGTGATGAAACTTTCTGTTCTTGATAAAAGGAAAATTAAAAATGACAATGATAATAATAATAATAATTAGGCAAAATTAATTTGGTGAAGCGAAATATCTATATACTGCATTTAGAAATAGTACACTTGAGTCTTTTGCTTGTCAAGACCAGAAAGGCCATTGCTGAGGTGTAGTCAGTTTGAGACAGGATACATGCATTTAATGGACAAAATCTTCCTATCTTGGATTTTCTTGGATAAGAACTGTTGGAAATTCTTATGTTGCTCGCCACGTAGGCATCAACATTGTAGATTAATTTCATCGTTTACTTGTCTTGTAAAATCATTCTTCTTTTTCAATAACAATCCTTAGATAGATTCAGTGTTTATTATCCATTTTTTGGTGCCGAAGTTAGTTATGATGTCTGACTGATATTCATGAGCATGGCGTTATTTATTCCAAAGCAAAGTAGCAATAAATCGTATTTGGGACAATGGACATAAATGACATCGGTTTGAAAGGACTTTTTATAATTATTCTCTTAGTCTTATCATTTGGGATTAAAGCCTGCCCGATTACATCTTGTTAAGGTGTTAGGTTCTGTTTTGGACTTTGCTTTCTTGCATTCCACTTTTGTATTCTTTTTATCTCACTTGCATTAACAGCCATGTCATGGAATTAGCATATGACTCCACACTGAATACAATACTTTTTAGGTCATCTAGATTTTATTTTTAGTTCCACACTTTTAATCCTTTTATATATTTTAATTGGTTACTTTTGAATTAAAAAAAATGATCTTGGGGCCTCATGCCCAAGCTTCGGTCATGGTCATGGCCTTGTCATGTCCACGAGTGTACAGGAACTAATCTTTGTAATAAATTATTCATGTAATATCTATTCTAGCACGAACACATCTTTTGTTGCTTGCTTGCGTATCATTAGATCATGAACATTCTCATCTATCTTTTTCTGATTATTCTCCCTCTATTGATGTGCAAATACTACGGGCTTATGGCCTTGTATGTGCAAATAGCATGGGCTTATTGGCTTGTTTGGTAGGGAATCTCAAAACAAAAATTAAAATACAAGAGATTTCATGTTTTCGAATATTTGTTTTTAGCCGATTCCGAAATTGAATTCTAATCTAAACAATGGTTTAAAATTTTTGATAATATAGTTAAAAATCATTATTTAAACTAGTTATAGTTAACCCACTATTAGTTGACAATGATTTGTTATTGATTTCTTTAGAAACATGCTTTATGTTAAAAAAAAATTACAATTATTATTAATTTATTATACATTACATAATACATATTTTAATCTTTTTAGAAAATATGAATTTGAACTTACAACATGACATACGGTATCTAGAAAATCTAAATGTGTTTATCTTTTTTTAATATAACTATGCATTTTAAAATTTAAAATTCAAAATCTGGATAAAATAAGAATACAATTATGTTATTTTTAGAATTTGCACACATAAACTTTCTAAGAAACAGTTTTCAAAAATAGATTTTGAATTATCTGTTAAACATTTGATAAACTCTAAAAGGATAAAGCAGAATTTGTATCGTAAGCTATACATGTCCTAAGCGATTCTAATAACGTGGGAATCAATTGTGCAGACATCAAGACCAGAGTACAACCAAATTCTTGTAAAGAAGCCTGAGGGATTTGATATGTGGCCATTCCAGTAAATTCTCGACTTCCCATTCATGTGATCCGATTCAATACTCACTCTCAAACTTTCTAAGTTTGTATCTTTTTATGTTGATGTGCAGGATGATGTAA

mRNA sequence

ATGGCTCGGGCAACTGGTCGGATCAGGAATGGGACCGATTCCTCGGGGGGAGGGTTTCTTAAGGCCACTTTCAGATTCTTGAAGATGGCGGAGTTTGAGATCCTTTTCGTTCTCTTCTTCATCGTAGCTTTTATTGTCTTCAAAGATCTTACATCAAGACCAGAGTACAACCAAATTCTTGTAAAGAAGCCTGAGGGATTTGATATGTGGCCATTCCAGATGATGTAA

Coding sequence (CDS)

ATGGCTCGGGCAACTGGTCGGATCAGGAATGGGACCGATTCCTCGGGGGGAGGGTTTCTTAAGGCCACTTTCAGATTCTTGAAGATGGCGGAGTTTGAGATCCTTTTCGTTCTCTTCTTCATCGTAGCTTTTATTGTCTTCAAAGATCTTACATCAAGACCAGAGTACAACCAAATTCTTGTAAAGAAGCCTGAGGGATTTGATATGTGGCCATTCCAGATGATGTAA

Protein sequence

MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQMM*

Homology

[Close]

BLAST of CsGy5G013360.2 vs. NCBI nr
Match: XP_011655131.2 (uncharacterized protein LOC101207856 [Cucumis sativus] >KGN50894.1 hypothetical protein Csa_023128 [Cucumis sativus])

HSP 1 Score: 151 bits (381), Expect = 5.95e-46
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0


Query: 1  MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60
          MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL
Sbjct: 1  MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60

Query: 61 VKKPEGFDMWPFQMM 75
          VKKPEGFDMWPFQMM
Sbjct: 61 VKKPEGFDMWPFQMM 75

[Close]

BLAST of CsGy5G013360.2 vs. NCBI nr
Match: XP_008463128.1 (PREDICTED: uncharacterized protein LOC103501353 [Cucumis melo])

HSP 1 Score: 142 bits (357), Expect = 2.59e-42
Identity = 70/73 (95.89%), Postives = 72/73 (98.63%), Query Frame = 0


Query: 1  MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60
          MARA+GR RNG+DSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL
Sbjct: 1  MARASGRSRNGSDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60

Query: 61 VKKPEGFDMWPFQ 73
          VKKPEGFDMWPFQ
Sbjct: 61 VKKPEGFDMWPFQ 73

[Close]

BLAST of CsGy5G013360.2 vs. NCBI nr
Match: KAG6579058.1 (hypothetical protein SDJN03_23506, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 130 bits (328), Expect = 1.56e-37
Identity = 65/73 (89.04%), Postives = 67/73 (91.78%), Query Frame = 0


Query: 1   MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60
           MARA GR R+G + SGGGFLKA FR LKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL
Sbjct: 29  MARAGGRSRSGNEPSGGGFLKAVFRLLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 88

Query: 61  VKKPEGFDMWPFQ 73
           VKKPEGFDMWPFQ
Sbjct: 89  VKKPEGFDMWPFQ 101

[Close]

BLAST of CsGy5G013360.2 vs. NCBI nr
Match: XP_022938472.1 (uncharacterized protein LOC111444698 [Cucurbita moschata] >KAG7016589.1 hypothetical protein SDJN02_21699 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 129 bits (324), Expect = 2.81e-37
Identity = 64/73 (87.67%), Postives = 66/73 (90.41%), Query Frame = 0


Query: 1  MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60
          MARA GR R+G + SGGGFLKA FR LKM EFEILFVLFFIVAFIVFKDLTSRPEYNQIL
Sbjct: 1  MARAGGRSRSGNEPSGGGFLKAVFRLLKMVEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60

Query: 61 VKKPEGFDMWPFQ 73
          VKKPEGFDMWPFQ
Sbjct: 61 VKKPEGFDMWPFQ 73

[Close]

BLAST of CsGy5G013360.2 vs. NCBI nr
Match: XP_023549700.1 (uncharacterized protein LOC111808120 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 129 bits (324), Expect = 2.81e-37
Identity = 65/73 (89.04%), Postives = 67/73 (91.78%), Query Frame = 0


Query: 1  MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60
          MARA GR R+  + SGGGFLKA FRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL
Sbjct: 1  MARAGGRSRSVNELSGGGFLKAVFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60

Query: 61 VKKPEGFDMWPFQ 73
          VKKPEGFDMWPFQ
Sbjct: 61 VKKPEGFDMWPFQ 73

[Close]

BLAST of CsGy5G013360.2 vs. ExPASy TrEMBL
Match: A0A0A0KPT8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G315390 PE=4 SV=1)

HSP 1 Score: 151 bits (381), Expect = 2.88e-46
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0


Query: 1  MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60
          MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL
Sbjct: 1  MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60

Query: 61 VKKPEGFDMWPFQMM 75
          VKKPEGFDMWPFQMM
Sbjct: 61 VKKPEGFDMWPFQMM 75

[Close]

BLAST of CsGy5G013360.2 vs. ExPASy TrEMBL
Match: A0A1S3CK24 (uncharacterized protein LOC103501353 OS=Cucumis melo OX=3656 GN=LOC103501353 PE=4 SV=1)

HSP 1 Score: 142 bits (357), Expect = 1.25e-42
Identity = 70/73 (95.89%), Postives = 72/73 (98.63%), Query Frame = 0


Query: 1  MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60
          MARA+GR RNG+DSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL
Sbjct: 1  MARASGRSRNGSDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60

Query: 61 VKKPEGFDMWPFQ 73
          VKKPEGFDMWPFQ
Sbjct: 61 VKKPEGFDMWPFQ 73

[Close]

BLAST of CsGy5G013360.2 vs. ExPASy TrEMBL
Match: A0A6J1FE48 (uncharacterized protein LOC111444698 OS=Cucurbita moschata OX=3662 GN=LOC111444698 PE=4 SV=1)

HSP 1 Score: 129 bits (324), Expect = 1.36e-37
Identity = 64/73 (87.67%), Postives = 66/73 (90.41%), Query Frame = 0


Query: 1  MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60
          MARA GR R+G + SGGGFLKA FR LKM EFEILFVLFFIVAFIVFKDLTSRPEYNQIL
Sbjct: 1  MARAGGRSRSGNEPSGGGFLKAVFRLLKMVEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60

Query: 61 VKKPEGFDMWPFQ 73
          VKKPEGFDMWPFQ
Sbjct: 61 VKKPEGFDMWPFQ 73

[Close]

BLAST of CsGy5G013360.2 vs. ExPASy TrEMBL
Match: A0A6J1K0Z3 (uncharacterized protein LOC111489659 OS=Cucurbita maxima OX=3661 GN=LOC111489659 PE=4 SV=1)

HSP 1 Score: 129 bits (323), Expect = 1.93e-37
Identity = 64/73 (87.67%), Postives = 66/73 (90.41%), Query Frame = 0


Query: 1  MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60
          MA A GR R+G + SGGGFLK  FRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL
Sbjct: 1  MALAGGRSRSGNEPSGGGFLKTVFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60

Query: 61 VKKPEGFDMWPFQ 73
          VKKPEGFDMWPFQ
Sbjct: 61 VKKPEGFDMWPFQ 73

[Close]

BLAST of CsGy5G013360.2 vs. ExPASy TrEMBL
Match: A0A6J1CIZ9 (uncharacterized protein LOC111011789 OS=Momordica charantia OX=3673 GN=LOC111011789 PE=4 SV=1)

HSP 1 Score: 124 bits (312), Expect = 9.76e-36
Identity = 61/73 (83.56%), Postives = 65/73 (89.04%), Query Frame = 0


Query: 1  MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60
          MAR  GR RNG DS+  GFLKA  RFLKMAEFEILF+LFF+VAFI+FKDLTSRPEYNQIL
Sbjct: 1  MARTGGRSRNGNDSAVVGFLKAVLRFLKMAEFEILFILFFVVAFILFKDLTSRPEYNQIL 60

Query: 61 VKKPEGFDMWPFQ 73
          VKKPEGFDMWPFQ
Sbjct: 61 VKKPEGFDMWPFQ 73

[Close]

BLAST of CsGy5G013360.2 vs. TAIR 10
Match: AT3G14430.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 16 Blast hits to 16 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 80.1 bits (196), Expect = 8.5e-16
Identity = 34/54 (62.96%), Postives = 46/54 (85.19%), Query Frame = 0


Query: 19 FLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPF 73
          F+ + F F ++AEFEILFVLF ++ +++FKDLTSRPEYN+ILV+KP G D+WPF
Sbjct: 23 FVDSVFYFFRLAEFEILFVLFMLITYVIFKDLTSRPEYNRILVEKPGGSDIWPF 76

The following BLAST results are available for this feature:

BLAST of CsGy5G013360.2 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy5G013360.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011655131.2	5.95e-46	100.00	uncharacterized protein LOC101207856 [Cucumis sativus] >KGN50894.1 hypothetical ...	[more]
XP_008463128.1	2.59e-42	95.89	PREDICTED: uncharacterized protein LOC103501353 [Cucumis melo]	[more]
KAG6579058.1	1.56e-37	89.04	hypothetical protein SDJN03_23506, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022938472.1	2.81e-37	87.67	uncharacterized protein LOC111444698 [Cucurbita moschata] >KAG7016589.1 hypothet...	[more]
XP_023549700.1	2.81e-37	89.04	uncharacterized protein LOC111808120 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy5G013360.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPT8	2.88e-46	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G315390 PE=4 SV=1	[more]
A0A1S3CK24	1.25e-42	95.89	uncharacterized protein LOC103501353 OS=Cucumis melo OX=3656 GN=LOC103501353 PE=...	[more]
A0A6J1FE48	1.36e-37	87.67	uncharacterized protein LOC111444698 OS=Cucurbita moschata OX=3662 GN=LOC1114446...	[more]
A0A6J1K0Z3	1.93e-37	87.67	uncharacterized protein LOC111489659 OS=Cucurbita maxima OX=3661 GN=LOC111489659...	[more]
A0A6J1CIZ9	9.76e-36	83.56	uncharacterized protein LOC111011789 OS=Momordica charantia OX=3673 GN=LOC111011...	[more]

BLAST of CsGy5G013360.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G14430.1	8.5e-16	62.96	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37223	OS08G0528601 PROTEIN	coord: 1..72

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsGy5G013360	CsGy5G013360	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy5G013360.2.exon3	CsGy5G013360.2.exon3	exon
CsGy5G013360.2.exon2	CsGy5G013360.2.exon2	exon
CsGy5G013360.2.exon1	CsGy5G013360.2.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.CsGy5G013360.2	cds.CsGy5G013360.2_3	CDS
cds.CsGy5G013360.2	cds.CsGy5G013360.2_2	CDS
cds.CsGy5G013360.2	cds.CsGy5G013360.2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsGy5G013360.2	CsGy5G013360.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006979	response to oxidative stress
cellular_component	GO:0016021	integral component of membrane