Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTACCAACCGGCAAAGCTCCGATCGGCGGTGACGGCGGCTGCGAGCGGCTGGAGCAGGCTCTCCGAGATTGCCACAAGCGACTACCAGAAGGTCCGGCGCGGCGGTCGGGCTGCGGGCACCTGAACCGATCTTTTGCGGAGTGCTTGGTGGCGACGGTGTGCCCTAACGAAGCGGAGGCGGTGCGAACACTCTGCTCTAGCGGCGGAACCGCTCTGAAGAGATCGCAATGCGAACAAGCTAAGTTTTCGTTCTCTTTATGTCTCTCTTCTCTCCAATTGTGA
mRNA sequence
ATGGTACCAACCGGCAAAGCTCCGATCGGCGGTGACGGCGGCTGCGAGCGGCTGGAGCAGGCTCTCCGAGATTGCCACAAGCGACTACCAGAAGGTCCGGCGCGGCGGTCGGGCTGCGGGCACCTGAACCGATCTTTTGCGGAGTGCTTGGTGGCGACGGTGTGCCCTAACGAAGCGGAGGCGGTGCGAACACTCTGCTCTAGCGGCGGAACCGCTCTGAAGAGATCGCAATGCGAACAAGCTAAGTTTTCGTTCTCTTTATGTCTCTCTTCTCTCCAATTGTGA
Coding sequence (CDS)
ATGGTACCAACCGGCAAAGCTCCGATCGGCGGTGACGGCGGCTGCGAGCGGCTGGAGCAGGCTCTCCGAGATTGCCACAAGCGACTACCAGAAGGTCCGGCGCGGCGGTCGGGCTGCGGGCACCTGAACCGATCTTTTGCGGAGTGCTTGGTGGCGACGGTGTGCCCTAACGAAGCGGAGGCGGTGCGAACACTCTGCTCTAGCGGCGGAACCGCTCTGAAGAGATCGCAATGCGAACAAGCTAAGTTTTCGTTCTCTTTATGTCTCTCTTCTCTCCAATTGTGA
Protein sequence
MVPTGKAPIGGDGGCERLEQALRDCHKRLPEGPARRSGCGHLNRSFAECLVATVCPNEAEAVRTLCSSGGTALKRSQCEQAKFSFSLCLSSLQL
Homology
BLAST of Cp4.1LG09g06840 vs. NCBI nr
Match:
XP_023542217.1 (uncharacterized protein LOC111802182 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 196 bits (499), Expect = 2.19e-63
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0
Query: 1 MVPTGKAPIGGDGGCERLEQALRDCHKRLPEGPARRSGCGHLNRSFAECLVATVCPNEAE 60
MVPTGKAPIGGDGGCERLEQALRDCHKRLPEGPARRSGCGHLNRSFAECLVATVCPNEAE
Sbjct: 1 MVPTGKAPIGGDGGCERLEQALRDCHKRLPEGPARRSGCGHLNRSFAECLVATVCPNEAE 60
Query: 61 AVRTLCSSGGTALKRSQCEQAKFSFSLCLSSLQL 94
AVRTLCSSGGTALKRSQCEQAKFSFSLCLSSLQL
Sbjct: 61 AVRTLCSSGGTALKRSQCEQAKFSFSLCLSSLQL 94
BLAST of Cp4.1LG09g06840 vs. NCBI nr
Match:
XP_022994930.1 (uncharacterized protein LOC111490507 [Cucurbita maxima])
HSP 1 Score: 193 bits (491), Expect = 3.64e-62
Identity = 93/94 (98.94%), Postives = 93/94 (98.94%), Query Frame = 0
Query: 1 MVPTGKAPIGGDGGCERLEQALRDCHKRLPEGPARRSGCGHLNRSFAECLVATVCPNEAE 60
MVPTGKAPIGGDGGCERLEQALRDCHKRLPEGPARRSGC HLNRSFAECLVATVCPNEAE
Sbjct: 1 MVPTGKAPIGGDGGCERLEQALRDCHKRLPEGPARRSGCWHLNRSFAECLVATVCPNEAE 60
Query: 61 AVRTLCSSGGTALKRSQCEQAKFSFSLCLSSLQL 94
AVRTLCSSGGTALKRSQCEQAKFSFSLCLSSLQL
Sbjct: 61 AVRTLCSSGGTALKRSQCEQAKFSFSLCLSSLQL 94
BLAST of Cp4.1LG09g06840 vs. NCBI nr
Match:
XP_022955041.1 (uncharacterized protein LOC111457119 [Cucurbita moschata])
HSP 1 Score: 192 bits (488), Expect = 1.05e-61
Identity = 92/94 (97.87%), Postives = 93/94 (98.94%), Query Frame = 0
Query: 1 MVPTGKAPIGGDGGCERLEQALRDCHKRLPEGPARRSGCGHLNRSFAECLVATVCPNEAE 60
MVPTGKAPIGGDGGCERLEQALRDCHKRLPEGPARRSGC HLNRSFAECLVATVCPNEAE
Sbjct: 1 MVPTGKAPIGGDGGCERLEQALRDCHKRLPEGPARRSGCWHLNRSFAECLVATVCPNEAE 60
Query: 61 AVRTLCSSGGTALKRSQCEQAKFSFSLCLSSLQL 94
AVRTLCSSGGTALKRSQCE+AKFSFSLCLSSLQL
Sbjct: 61 AVRTLCSSGGTALKRSQCEEAKFSFSLCLSSLQL 94
BLAST of Cp4.1LG09g06840 vs. NCBI nr
Match:
KAG6573459.1 (hypothetical protein SDJN03_27346, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012607.1 hypothetical protein SDJN02_25359, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 191 bits (484), Expect = 4.26e-61
Identity = 91/94 (96.81%), Postives = 93/94 (98.94%), Query Frame = 0
Query: 1 MVPTGKAPIGGDGGCERLEQALRDCHKRLPEGPARRSGCGHLNRSFAECLVATVCPNEAE 60
MVPTGKAPIGGDGGCERLE+ALRDCHKRLPEGPARRSGC HLNRSFAECLVATVCPNEAE
Sbjct: 1 MVPTGKAPIGGDGGCERLEKALRDCHKRLPEGPARRSGCWHLNRSFAECLVATVCPNEAE 60
Query: 61 AVRTLCSSGGTALKRSQCEQAKFSFSLCLSSLQL 94
AVRTLCSSGGTALKRSQCE+AKFSFSLCLSSLQL
Sbjct: 61 AVRTLCSSGGTALKRSQCEEAKFSFSLCLSSLQL 94
BLAST of Cp4.1LG09g06840 vs. NCBI nr
Match:
XP_004145445.1 (uncharacterized protein LOC101219184 [Cucumis sativus])
HSP 1 Score: 169 bits (428), Expect = 1.49e-52
Identity = 78/93 (83.87%), Postives = 86/93 (92.47%), Query Frame = 0
Query: 1 MVPTGKAPIGGDGGCERLEQALRDCHKRLPEGPARRSGCGHLNRSFAECLVATVCPNEAE 60
M+P G++P+GGDGGC+RLEQALR+CHKR+PEGPARRS C HLNRS AECLVAT CP+EAE
Sbjct: 1 MLPMGESPLGGDGGCDRLEQALRECHKRVPEGPARRSACRHLNRSLAECLVATACPSEAE 60
Query: 61 AVRTLCSSGGTALKRSQCEQAKFSFSLCLSSLQ 93
AVRTLCSSGGTALKRSQCEQAKFS S CLSSLQ
Sbjct: 61 AVRTLCSSGGTALKRSQCEQAKFSLSFCLSSLQ 93
BLAST of Cp4.1LG09g06840 vs. ExPASy TrEMBL
Match:
A0A6J1K2P5 (uncharacterized protein LOC111490507 OS=Cucurbita maxima OX=3661 GN=LOC111490507 PE=4 SV=1)
HSP 1 Score: 193 bits (491), Expect = 1.76e-62
Identity = 93/94 (98.94%), Postives = 93/94 (98.94%), Query Frame = 0
Query: 1 MVPTGKAPIGGDGGCERLEQALRDCHKRLPEGPARRSGCGHLNRSFAECLVATVCPNEAE 60
MVPTGKAPIGGDGGCERLEQALRDCHKRLPEGPARRSGC HLNRSFAECLVATVCPNEAE
Sbjct: 1 MVPTGKAPIGGDGGCERLEQALRDCHKRLPEGPARRSGCWHLNRSFAECLVATVCPNEAE 60
Query: 61 AVRTLCSSGGTALKRSQCEQAKFSFSLCLSSLQL 94
AVRTLCSSGGTALKRSQCEQAKFSFSLCLSSLQL
Sbjct: 61 AVRTLCSSGGTALKRSQCEQAKFSFSLCLSSLQL 94
BLAST of Cp4.1LG09g06840 vs. ExPASy TrEMBL
Match:
A0A6J1GSM0 (uncharacterized protein LOC111457119 OS=Cucurbita moschata OX=3662 GN=LOC111457119 PE=4 SV=1)
HSP 1 Score: 192 bits (488), Expect = 5.06e-62
Identity = 92/94 (97.87%), Postives = 93/94 (98.94%), Query Frame = 0
Query: 1 MVPTGKAPIGGDGGCERLEQALRDCHKRLPEGPARRSGCGHLNRSFAECLVATVCPNEAE 60
MVPTGKAPIGGDGGCERLEQALRDCHKRLPEGPARRSGC HLNRSFAECLVATVCPNEAE
Sbjct: 1 MVPTGKAPIGGDGGCERLEQALRDCHKRLPEGPARRSGCWHLNRSFAECLVATVCPNEAE 60
Query: 61 AVRTLCSSGGTALKRSQCEQAKFSFSLCLSSLQL 94
AVRTLCSSGGTALKRSQCE+AKFSFSLCLSSLQL
Sbjct: 61 AVRTLCSSGGTALKRSQCEEAKFSFSLCLSSLQL 94
BLAST of Cp4.1LG09g06840 vs. ExPASy TrEMBL
Match:
A0A0A0LYC1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G702000 PE=4 SV=1)
HSP 1 Score: 169 bits (428), Expect = 7.23e-53
Identity = 78/93 (83.87%), Postives = 86/93 (92.47%), Query Frame = 0
Query: 1 MVPTGKAPIGGDGGCERLEQALRDCHKRLPEGPARRSGCGHLNRSFAECLVATVCPNEAE 60
M+P G++P+GGDGGC+RLEQALR+CHKR+PEGPARRS C HLNRS AECLVAT CP+EAE
Sbjct: 1 MLPMGESPLGGDGGCDRLEQALRECHKRVPEGPARRSACRHLNRSLAECLVATACPSEAE 60
Query: 61 AVRTLCSSGGTALKRSQCEQAKFSFSLCLSSLQ 93
AVRTLCSSGGTALKRSQCEQAKFS S CLSSLQ
Sbjct: 61 AVRTLCSSGGTALKRSQCEQAKFSLSFCLSSLQ 93
BLAST of Cp4.1LG09g06840 vs. ExPASy TrEMBL
Match:
A0A6J1CN74 (uncharacterized protein LOC111012670 OS=Momordica charantia OX=3673 GN=LOC111012670 PE=4 SV=1)
HSP 1 Score: 164 bits (415), Expect = 1.11e-50
Identity = 79/96 (82.29%), Postives = 86/96 (89.58%), Query Frame = 0
Query: 1 MVPTGKAPI--GGDGGCERLEQALRDCHKRLPEGPARRSGCGHLNRSFAECLVATVCPNE 60
M+PTG+API GG GGCERLEQALRDCH+R+P+GPARRS C HLNRS AECLVAT CPNE
Sbjct: 14 MLPTGEAPISGGGVGGCERLEQALRDCHRRVPDGPARRSACRHLNRSLAECLVATACPNE 73
Query: 61 AEAVRTLCSSGGTALKRSQCEQAKFSFSLCLSSLQL 94
AEAVRTLCS+ GTALKRSQC+QAKFS S CLSSLQL
Sbjct: 74 AEAVRTLCSTAGTALKRSQCQQAKFSLSFCLSSLQL 109
BLAST of Cp4.1LG09g06840 vs. ExPASy TrEMBL
Match:
A0A5D3CLT3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G00190 PE=4 SV=1)
HSP 1 Score: 162 bits (410), Expect = 4.03e-50
Identity = 76/93 (81.72%), Postives = 83/93 (89.25%), Query Frame = 0
Query: 1 MVPTGKAPIGGDGGCERLEQALRDCHKRLPEGPARRSGCGHLNRSFAECLVATVCPNEAE 60
M+P G++P+ GD GCERLEQALR+CHKR+PEGPARRS C HLNRS AECLVAT CP+E E
Sbjct: 1 MLPIGESPMCGDDGCERLEQALRECHKRVPEGPARRSACRHLNRSLAECLVATACPSEVE 60
Query: 61 AVRTLCSSGGTALKRSQCEQAKFSFSLCLSSLQ 93
AVRTLCSSGGTALKRSQCEQAKFS S CLSSLQ
Sbjct: 61 AVRTLCSSGGTALKRSQCEQAKFSLSFCLSSLQ 93
BLAST of Cp4.1LG09g06840 vs. TAIR 10
Match:
AT1G31175.1 (unknown protein; Has 20 Blast hits to 20 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 124.8 bits (312), Expect = 3.7e-29
Identity = 56/79 (70.89%), Postives = 67/79 (84.81%), Query Frame = 0
Query: 15 CERLEQALRDCHKRLPEGPARRSGCGHLNRSFAECLVATVCPNEAEAVRTLCSSGGTALK 74
C+RLE+AL CH+R+PEGPARRSGC HLN++FAEC+VA CP E+EAVR+LCSSGGT+LK
Sbjct: 34 CDRLEEALLQCHRRMPEGPARRSGCRHLNKAFAECVVAEACPEESEAVRSLCSSGGTSLK 93
Query: 75 RSQCEQAKFSFSLCLSSLQ 94
R QCE A+ S SLCLS Q
Sbjct: 94 RKQCEYAQLSLSLCLSRHQ 112
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| XP_023542217.1 | 2.19e-63 | 100.00 | uncharacterized protein LOC111802182 [Cucurbita pepo subsp. pepo] | [more] |
| XP_022994930.1 | 3.64e-62 | 98.94 | uncharacterized protein LOC111490507 [Cucurbita maxima] | [more] |
| XP_022955041.1 | 1.05e-61 | 97.87 | uncharacterized protein LOC111457119 [Cucurbita moschata] | [more] |
| KAG6573459.1 | 4.26e-61 | 96.81 | hypothetical protein SDJN03_27346, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| XP_004145445.1 | 1.49e-52 | 83.87 | uncharacterized protein LOC101219184 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1K2P5 | 1.76e-62 | 98.94 | uncharacterized protein LOC111490507 OS=Cucurbita maxima OX=3661 GN=LOC111490507... | [more] |
| A0A6J1GSM0 | 5.06e-62 | 97.87 | uncharacterized protein LOC111457119 OS=Cucurbita moschata OX=3662 GN=LOC1114571... | [more] |
| A0A0A0LYC1 | 7.23e-53 | 83.87 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G702000 PE=4 SV=1 | [more] |
| A0A6J1CN74 | 1.11e-50 | 82.29 | uncharacterized protein LOC111012670 OS=Momordica charantia OX=3673 GN=LOC111012... | [more] |
| A0A5D3CLT3 | 4.03e-50 | 81.72 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT1G31175.1 | 3.7e-29 | 70.89 | unknown protein; Has 20 Blast hits to 20 proteins in 10 species: Archae - 0; Bac... | [more] |
