Cp4.1LG09g06540 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Position :
0
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AGTGGGCTCATGGATCCTGGCAAGCTTTTTATTGGGGGTATTTCGTGGGACACAGATGAAGATCGACTTAAACAGTATTTTCAAACCTATGGAGAAGTGGTGGAGGTGATGATCATGAGGGATCGGAACACTGGCCGTGCTCGTGGCTTCGGTTTCGTCGTGTTTTCTGACCCTGTTGTTGCAGCTAGAGTTGTATTGGAGAAGCATGTTATTGATGGAAGAACTGTTGAAGCAAAGAAGGCTGTTCCTCGAGACGATCAGAACATTTTGAGCAGGAACAATACCGGTATCCTTGGGTCACCTGGCCCGACTCGCACAAAGAAGATATTTGTAGGGGGTTTGGCATCAACGGTTACGGAGAGTGACTTCAAAAAATATTTTGATCAGTTTGGAACGATCACAGATGCCGTGGTGATGTATGATCACAATACTCAGAGACCGAGAGGCTTTGGATTTATCACGTACGAGTCGGAGGAATCGGTGGAGAAAGTGTTATACAAAACATTTCATGAACTCAATGGTAAAATGGTTGAGGTTAAGAGAGCTGTTCCAAAAGAATTATCACCAGTGCCAAATCGAAATCAATTAGGTGCATACCCTTACAGTTTTGGTAGAGTTGGTAGCTATTTAAGTGGTTATAATCAAGGATATAACACAACCTCAGTTGGGGGATATGGACTGAGATCTGATGGTAGGTTTAGTCCTGTTACGGTCGGTCGGGGTGGGCTGTCTCCAATTAGTCCTGGTTATGGAATAGGTCTAAATCTCGACGCAGGGTTGAACCTGAACTATGGGACCGGTCCCAATGGCAGTTCTAACCTCATTTACGGACGGGTAATGAGTTCTTCCTATGGTGGAAATTTAAATAGGTATGGTAGTCCAAGCCCCATGGTATATGGCGGAGGCAGTGGAGGTAATGGTTCTATTTTAAGCTCGTCGGTTCAGAATCTGTGGGGAAATGTCGGTAACTCGGCTGGTACGAATGCCTCGCACCTGAGGACGTTTCCTGGCTCTGGTGGTGTGCATACGGGAACGAGTTCATTGAACGGTATTGGAGGGCTTTGGGGTGTAGGTCATGGCGAAAACGCAGGTTCTTCTCCATTCAATGGTGCTGGTAATGTCGAGTTTGGAAACGGAGGAAGCGTTGTAGGTTATGGTAGAAGCATTAGAAGCAATGTTTCTTCAGCTTCTTTGTACTCTGCACCAAATATTTATGATGAAGTTCATGGGAATAATGAAGAAGGAAACTCATTTTATGGGCATTCAAGTTGGCAGTCATTGCCCACAGAGCTTGAGGATTCTTCCTCAATTGGGTTTGGGCTTGGCAATGCTGCTTCAGATGTTATTAGTAGAAACAATGCTTCTGGTTATACTGTTGGATATGGGTGCATTGCCTTTATCTAA200400600800100012001400Expect = 2.8E-22 / Score = 90.0Expect = 4.1E-24 / Score = 96.1Expect = 1.5E-15 / Score = 56.8Expect = 2.4E-16 / Score = 59.3Score = 17.676954Score = 17.728121Expect = 1.8E-26 / Score = 94.2Expect = 2.1E-26 / Score = 93.9Score = Score = Expect = 2.62384E-48 / Score = 158.683Score = Score = SequenceSM00360PF00076PS50102PS50102G3DSA:3.30.70.330G3DSA:3.30.70.330PTHR48032:SF1PTHR48032cd12327SSF54928SSF54928
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 8..79
e-value: 2.8E-22
score: 90.0
coord: 108..180
e-value: 4.1E-24
score: 96.1
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 9..74
e-value: 1.5E-15
score: 56.8
coord: 109..167
e-value: 2.4E-16
score: 59.3
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 107..184
score: 17.676954
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 7..83
score: 17.728121
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 6..89
e-value: 1.8E-26
score: 94.2
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 104..190
e-value: 2.1E-26
score: 93.9
NoneNo IPR availablePANTHERPTHR48032:SF1HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 1-LIKEcoord: 4..462
NoneNo IPR availablePANTHERPTHR48032RNA-BINDING PROTEIN MUSASHI HOMOLOG RBP6coord: 4..462
IPR034131DAZ-associated protein 1, RNA recognition motif 2CDDcd12327RRM2_DAZAP1coord: 105..184
e-value: 2.62384E-48
score: 158.683
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 5..102
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 103..205