CmoCh08G000040 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh08G000040
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Unknown protein
Location	Cmo_Chr08: 28313 .. 31332 (-)
RNA-Seq Expression	CmoCh08G000040
Synteny	CmoCh08G000040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGTTTCTTGGTCGGAGACGGAGACGCCAGCAGCGTGGAGGGCGGAGGCCGGGATAGTACCGGAGCCAGTAGCGGCGATGATGGACGGCTCGGCCTGCTGTAGAAGCCACTGAATGGTCTCCCCATCGGTTTTATGGCCTAATTCGCGAGTCAATTGAAAGACGCGGGCGGCGCAGAGGGCAGGCATGCGGATCCTGCGGCCACGGCCATCGACTTTCTTGTGACGATCTTTGTTGGAGGTGCGTTTAGGAGCCAATTGTTGGTGGTGTTTGTTTTCATCTTTGGATGCAATTATGATATTGAAGTCTTTGATATCTGCTGATGGTGGTGGTGGTGGAGTTATTGTTGTTGGAGTTGATGCTGGTGGTGATGGCTTCTTCTTGTTGTGCTCTGCCATGTCTGCTAATGGGTGTGGGGATGGGGGGGCGGGGGGAGGACCCAAACAAAGGTGGGTTCCTCTGTGTGGACTAATGGGGTTTATGGGAGGAGGAGAGGAGAAAGAGAGAGATAGTCAGAAAAGAAAATGGGTCCTCCTCCTCCATGATTGAGTTGTTTGAAGAAGCTGACTTGGCTCACTCTTTTCTTTTTATTTTTTGACTCAAAATGGGGATTTCGAGCTTCCACTGTGTGCTTTTAAATGCATTACAGCTTGCTTCACCTCTCATCTTGTCATAAAGTCCAAACCAAAAGTGGATGAAATTTTAGTGTTTCTGGTGTTGCCTATTCATTCATATTACAATTAACTGTAATCTGAATTTAACTGCTCGCAGGGTTATGAACTGCGTTTATTTACTCCTTCTCCTTCTCCAGCATGTTTATCACATCTTACAACTATTTACTCCTTCTCCTTCTCCTTCATGTTTATCACATCTTACAACTATTTACTCCTTCTCCTTCTCCTTCATGTTTTATCACATCTTACAACACTTCCTCACTTCTCTAATCATCCACAAATTTATATGGTGGGTCAACTCAAATTAATATCAAATCGGTACAAATTTGGACTTTTCTTTTTCATTTTTGTTTAGTTTATGATCAGCCTCCTTTTATGGTTGAAATTAAATTTGGAAATATAAGTTTTTTTTTTTTTTTTTTGGGTGCAATAACTTTTTTAGGGCATGAAATGTTTTGGCTAATCGAAAAATGTGTGGAATTGGTGATTCTGATAAGCTATAGTAGCAATTATTAGTTGACATGTTGGATCATTATGATACCAGCTCTTACCAAACCAAATCTCCTTGCCAATCATATTGTTTCCTAGTTTTTAAAACCCTTACTCATTTTGTGCCACTAACTCACTGAATTGCTGAGCTTTTTCCCCCTTTCCCCCCTTTCCCCCCTTCATATATATATATATATGATTCCTTCAAAAACTTCTGTTCATGCTCAGCATCAACTTCAACAATTCAAATTTCATACTCCACTACTCCACCTACCATGTCAATTACCCCCAACATGTCTTCATTTTCGCAATTTAAATTCTCAATAATTATTGTGATGGAAGAATAAAAACGTTAGCAATTTTTAAAATAGTTTTGTGTTTCGTATGTTTTCCTTGTTTTTAAGATAAATTATGCAAGATCTCATGTCGATTGGAGAGAAAAACGAAACATTTTGTGCTAATTGATATTGTCAATCTCACGATTTTAAAATGTATCTATTAGGGATGATGAGAGTGAGTTCACATGTTGAGGTAGATAAGGTTTTAGAAGAATTTTGGTGGTTTTTTTTTTTTTTTTTTTTTTGTTAAGATGAATTTGAATTCTACCCATGATATCATTATTTATTAATTAAAGTATTAATGTTTTAATAAAAGTGCTCTAACGTTGGGTTTCTTTCTTTTCCTTGGAATTTTGATGGTGATTGGTAATGCGACAAAACACATTACAAAGAAATGTCAGCTTATTTGGGCAACAAATTTCCACTACACTTTTCTTGCTTTCATACTTGAAAATTGGAAATTTTAGGGGAAAATTTTCATTTGGAAAGAAAAAAAGAAAAAAAGGAGACGATAATAATGGGTAGGTGGCTAACATTTGTCCTTTTCTTCCATGGTTTCACATCCTGTGTTGGCCACCGAGGGAACACCTATGGGTCCCTTCTCTTAAAAACTTTGCCATTGACATATCACCCACCCTTTTCCAACATTTCCTTTTTCTTTTTTATTTTTTAAAACAATAAAATTATTGTTGAATTGGTTTTCAAAGGCGGTGTTTTTATTACATCACGAGTCTGAGGAGGAGGCTTTGTTTCATGAAATAATTGTCCTTTCCTATTGGGAATCAAAATTACATTCTTTCTCTGTCTTCTTTGTTTCCAAGTAGTTTCTAAGTCTGTTCCAGCTTGAATTTCATGCATCATTATAATGTCTTTTTTGGTATTAAGTCTTCTCTTGCAATGAAGGCCTGTGGTGGTTTCCTTCTCCTTTTCACTCCCATCCGCACGGTTGAGACGCCCTCCAGGGTGCCCACCTCTTCCGCTTCTTTCTTTTTCTTGCTCTTCCTTTTCTTCCTCCTTTTCCTCAATCAATACCCTCATACTTTCATGACCAACATGATTTTGCAGCACCCAGCTTTTGTTCTCCCACGACGCGGATGACAATGACACTGACGAGGAACAACAAACATCTTGGGGTGAGGTGAAGACCCAAAGCATAGCCGGAGGGAATGGATTAGATTGGGAAGATAGCTAATGCTAAAGATGAAGATGATGAGAGTGAAGACTGAGATTGTTTTCCTTATGAGTTTATAAGATGGAAGCCTTCAATCTTTTATCATTATCATTATGACACCAGAACTAGAAGGAAAAAGACAAATAAAAAAAATAAAACCAAAGCCGGAGTTGTTAGTTGGGACTCATTAATTGTGCAATAAAGATTGGTGTTTTGAATTCTGGAAATTTTGGGTTCCTTGTGCACAAAGTAGCCAAATAAGATATTTTGGTGGTGGGATTCAAACAATGCTACACTTTAATAATTGTGTGGTAACTTTTTGAAAAGTTAAAGAAGCATAGAGAA

mRNA sequence

ATGGAGGTTTCTTGGTCGGAGACGGAGACGCCAGCAGCGTGGAGGGCGGAGGCCGGGATAGTACCGGAGCCAGTAGCGGCGATGATGGACGGCTCGGCCTGCTACGCGGGCGGCGCAGAGGGCAGGCATGCGGATCCTGCGGCCACGGCCATCGACTTTCTTGTGACGATCTTTGTTGGAGGTGCGTTTAGGAGCCAATTGTTGGTGTCTTTGATATCTGCTGATGGTGGTGGTGGTGGAGTTATTGTTGTTGGAGTTGATGCTGGTGGTGATGGCTTCTTCTTGTTGTGCTCTGCCATGTCTGCTAATGGGTGTGGGGATGGGGGGGCGGGGGGAGGACCCAAACAAAGCACCCAGCTTTTGTTCTCCCACGACGCGGATGACAATGACACTGACGAGGAACAACAAACATCTTGGGGTGAGGTGAAGACCCAAAGCATAGCCGGAGGGAATGGATTAGATTGGGAAGATAGCTAATGCTAAAGATGAAGATGATGAGAGTGAAGACTGAGATTGTTTTCCTTATGAGTTTATAAGATGGAAGCCTTCAATCTTTTATCATTATCATTATGACACCAGAACTAGAAGGAAAAAGACAAATAAAAAAAATAAAACCAAAGCCGGAGTTGTTAGTTGGGACTCATTAATTGTGCAATAAAGATTGGTGTTTTGAATTCTGGAAATTTTGGGTTCCTTGTGCACAAAGTAGCCAAATAAGATATTTTGGTGGTGGGATTCAAACAATGCTACACTTTAATAATTGTGTGGTAACTTTTTGAAAAGTTAAAGAAGCATAGAGAA

Coding sequence (CDS)

ATGGAGGTTTCTTGGTCGGAGACGGAGACGCCAGCAGCGTGGAGGGCGGAGGCCGGGATAGTACCGGAGCCAGTAGCGGCGATGATGGACGGCTCGGCCTGCTACGCGGGCGGCGCAGAGGGCAGGCATGCGGATCCTGCGGCCACGGCCATCGACTTTCTTGTGACGATCTTTGTTGGAGGTGCGTTTAGGAGCCAATTGTTGGTGTCTTTGATATCTGCTGATGGTGGTGGTGGTGGAGTTATTGTTGTTGGAGTTGATGCTGGTGGTGATGGCTTCTTCTTGTTGTGCTCTGCCATGTCTGCTAATGGGTGTGGGGATGGGGGGGCGGGGGGAGGACCCAAACAAAGCACCCAGCTTTTGTTCTCCCACGACGCGGATGACAATGACACTGACGAGGAACAACAAACATCTTGGGGTGAGGTGAAGACCCAAAGCATAGCCGGAGGGAATGGATTAGATTGGGAAGATAGCTAA

Protein sequence

MEVSWSETETPAAWRAEAGIVPEPVAAMMDGSACYAGGAEGRHADPAATAIDFLVTIFVGGAFRSQLLVSLISADGGGGGVIVVGVDAGGDGFFLLCSAMSANGCGDGGAGGGPKQSTQLLFSHDADDNDTDEEQQTSWGEVKTQSIAGGNGLDWEDS

Homology

The following BLAST results are available for this feature:

BLAST of CmoCh08G000040 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh08G000040 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh08G000040 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh08G000040 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 108..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh08G000040.1	CmoCh08G000040.1	mRNA