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Cmc07g0191461 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGTCAAGACAGCCTTTTTAAATGGAAATCTTGAGAAGAGTATCTATCTGGTTCAACCAGAGGGGTTTATACAAAAGGGTCAAGAACAAAGGGTTTGTAAGCTTCAAAAATCCATATATGGATTAAAACTAGCATCTAAATTCTGGAATATAAGATTTGATACTACGATCAAATCTTATGGTTTTGAACAAAATGTTGCTGAACCTTGTGTTTACAAAAGAATCATCAAATCTACTGTAGTATTCTTAGTTCTGTATGTAGATAACATTCTACTCATTGGGAATGATGTAGGTAATCTAACTGATATTAAGAAATGGCTAGCTACGCAATTCCAAATGAAAGATTTGGGAAATGCACAATATGTTCTTGGTATCCAAATAGTTCGAAACCGAAAGAACAAAACACTAGTCATGTCTCAAACATCTTATATAGACAAAATGTTGTGA ATGGATGTCAAGACAGCCTTTTTAAATGGAAATCTTGAGAAGAGTATCTATCTGGTTCAACCAGAGGGGTTTATACAAAAGGGTCAAGAACAAAGGGTTTGTAAGCTTCAAAAATCCATATATGGATTAAAACTAGCATCTAAATTCTGGAATATAAGATTTGATACTACGATCAAATCTTATGGTTTTGAACAAAATGTTGCTGAACCTTGTGTTTACAAAAGAATCATCAAATCTACTGTAGTATTCTTAGTTCTGTATGTAGATAACATTCTACTCATTGGGAATGATGTAGGTAATCTAACTGATATTAAGAAATGGCTAGCTACGCAATTCCAAATGAAAGATTTGGGAAATGCACAATATGTTCTTGGTATCCAAATAGTTCGAAACCGAAAGAACAAAACACTAGTCATGTCTCAAACATCTTATATAGACAAAATGTTGTGA ATGGATGTCAAGACAGCCTTTTTAAATGGAAATCTTGAGAAGAGTATCTATCTGGTTCAACCAGAGGGGTTTATACAAAAGGGTCAAGAACAAAGGGTTTGTAAGCTTCAAAAATCCATATATGGATTAAAACTAGCATCTAAATTCTGGAATATAAGATTTGATACTACGATCAAATCTTATGGTTTTGAACAAAATGTTGCTGAACCTTGTGTTTACAAAAGAATCATCAAATCTACTGTAGTATTCTTAGTTCTGTATGTAGATAACATTCTACTCATTGGGAATGATGTAGGTAATCTAACTGATATTAAGAAATGGCTAGCTACGCAATTCCAAATGAAAGATTTGGGAAATGCACAATATGTTCTTGGTATCCAAATAGTTCGAAACCGAAAGAACAAAACACTAGTCATGTCTCAAACATCTTATATAGACAAAATGTTGTGA MDVKTAFLNGNLEKSIYLVQPEGFIQKGQEQRVCKLQKSIYGLKLASKFWNIRFDTTIKSYGFEQNVAEPCVYKRIIKSTVVFLVLYVDNILLIGNDVGNLTDIKKWLATQFQMKDLGNAQYVLGIQIVRNRKNKTLVMSQTSYIDKML Homology
BLAST of Cmc07g0191461 vs. NCBI nr
Match: KAA0045356.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 263.5 bits (672), Expect = 1.1e-66 Identity = 130/149 (87.25%), Postives = 140/149 (93.96%), Query Frame = 0
BLAST of Cmc07g0191461 vs. NCBI nr
Match: KAA0063026.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 255.8 bits (652), Expect = 2.4e-64 Identity = 126/148 (85.14%), Postives = 132/148 (89.19%), Query Frame = 0
BLAST of Cmc07g0191461 vs. NCBI nr
Match: TYK03644.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 255.4 bits (651), Expect = 3.1e-64 Identity = 126/149 (84.56%), Postives = 135/149 (90.60%), Query Frame = 0
BLAST of Cmc07g0191461 vs. NCBI nr
Match: TYK09500.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 253.8 bits (647), Expect = 9.0e-64 Identity = 120/149 (80.54%), Postives = 136/149 (91.28%), Query Frame = 0
BLAST of Cmc07g0191461 vs. NCBI nr
Match: ADJ18449.1 (gag/pol protein, partial [Bryonia dioica]) HSP 1 Score: 252.3 bits (643), Expect = 2.6e-63 Identity = 122/149 (81.88%), Postives = 134/149 (89.93%), Query Frame = 0
BLAST of Cmc07g0191461 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 1.2e-34 Identity = 71/150 (47.33%), Postives = 108/150 (72.00%), Query Frame = 0
BLAST of Cmc07g0191461 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3) HSP 1 Score: 99.4 bits (246), Expect = 3.7e-20 Identity = 53/152 (34.87%), Postives = 91/152 (59.87%), Query Frame = 0
BLAST of Cmc07g0191461 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 3.1e-19 Identity = 53/149 (35.57%), Postives = 84/149 (56.38%), Query Frame = 0
BLAST of Cmc07g0191461 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 9.2e-19 Identity = 48/144 (33.33%), Postives = 83/144 (57.64%), Query Frame = 0
BLAST of Cmc07g0191461 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2) HSP 1 Score: 89.0 bits (219), Expect = 5.0e-17 Identity = 49/147 (33.33%), Postives = 75/147 (51.02%), Query Frame = 0
BLAST of Cmc07g0191461 vs. ExPASy TrEMBL
Match: A0A5A7TTA2 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G001350 PE=4 SV=1) HSP 1 Score: 263.5 bits (672), Expect = 5.5e-67 Identity = 130/149 (87.25%), Postives = 140/149 (93.96%), Query Frame = 0
BLAST of Cmc07g0191461 vs. ExPASy TrEMBL
Match: A0A5A7V9B0 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G001330 PE=4 SV=1) HSP 1 Score: 255.8 bits (652), Expect = 1.1e-64 Identity = 126/148 (85.14%), Postives = 132/148 (89.19%), Query Frame = 0
BLAST of Cmc07g0191461 vs. ExPASy TrEMBL
Match: A0A5D3BX45 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1369G00740 PE=4 SV=1) HSP 1 Score: 255.4 bits (651), Expect = 1.5e-64 Identity = 126/149 (84.56%), Postives = 135/149 (90.60%), Query Frame = 0
BLAST of Cmc07g0191461 vs. ExPASy TrEMBL
Match: A0A5D3CDT9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold499G001020 PE=4 SV=1) HSP 1 Score: 253.8 bits (647), Expect = 4.4e-64 Identity = 120/149 (80.54%), Postives = 136/149 (91.28%), Query Frame = 0
BLAST of Cmc07g0191461 vs. ExPASy TrEMBL
Match: E2GK51 (Gag/pol protein (Fragment) OS=Bryonia dioica OX=3652 PE=4 SV=1) HSP 1 Score: 252.3 bits (643), Expect = 1.3e-63 Identity = 122/149 (81.88%), Postives = 134/149 (89.93%), Query Frame = 0
BLAST of Cmc07g0191461 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 ) HSP 1 Score: 98.2 bits (243), Expect = 5.9e-21 Identity = 46/135 (34.07%), Postives = 86/135 (63.70%), Query Frame = 0
BLAST of Cmc07g0191461 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein ) HSP 1 Score: 47.8 bits (112), Expect = 9.1e-06 Identity = 29/68 (42.65%), Postives = 42/68 (61.76%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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