Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTCAAGAAATGGCTCGAGTTATGATACATCCCAAAAATTTACCTCTGCATTTTTGGGCAGAAGCTGTTAACACAACGTGTCACATTCACAACAGGATTACTACTCGATCTGGAACGACTGTCACGTTATATGAACTTTGGAATGGAAGAAAGTTGAACGTAAAGTATTTTCATGTTTTTGGAAATACTTGTTATATTCTAGCTAATAGAGAATATCATCGAAAGTGGGATGTGAAATTAGAACAAGGAATCTTTCTTGAATATTCTCATAATAGTCGTGCTTATAGAGTCTTTAATATTAAATCTGGTATAGTTATGGAAACGATCAATGTTGTGGTAAATGATTTTGAATCAACTGACAATCAAATTAATGATGAGGATGATGAGACTGTAAATATACCTGTGGATAATTCACTGTGTTCTGTGGAGGTACCTAAAGCTGATGCTTTAATAGATGGTTCTGGTATAAACTCAGAAAAGATATCTAAGGAAGTTATAGCTGATAATCTTGAGTTTGTTCCTTTTGCACATGTGAAGAAGAATCATCCATCAAGTTCTATAATAGGTGATCCTCCAGCTGGAATTATCACTCAAAAGAAAGAGAAAGTAGATTACTTGAAGATGATTGCTGACTTATGTTATACATTTGCCATCAAACCCTCAACTATTGACGTTGCTCTTAAAGATGAATATTGGATTAACGTAATGCAAGAAGAACTACTCCAATTCATGAGAAACAATGTCTAG
mRNA sequence
ATGCTTCAAGAAATGGCTCGAGTTATGATACATCCCAAAAATTTACCTCTGCATTTTTGGGCAGAAGCTGTTAACACAACGTGTCACATTCACAACAGGATTACTACTCGATCTGGAACGACTGTCACGTTATATGAACTTTGGAATGGAAGAAAGTTGAACGTAAAGTATTTTCATGTTTTTGGAAATACTTGTTATATTCTAGCTAATAGAGAATATCATCGAAAGTGGGATGTGAAATTAGAACAAGGAATCTTTCTTGAATATTCTCATAATAGTCGTGCTTATAGAGTCTTTAATATTAAATCTGGTATAGTTATGGAAACGATCAATGTTGTGGTAAATGATTTTGAATCAACTGACAATCAAATTAATGATGAGGATGATGAGACTGTAAATATACCTGTGGATAATTCACTGTGTTCTGTGGAGGTACCTAAAGCTGATGCTTTAATAGATGGTTCTGGTATAAACTCAGAAAAGATATCTAAGGAAGTTATAGCTGATAATCTTGAGTTTGTTCCTTTTGCACATGTGAAGAAGAATCATCCATCAAGTTCTATAATAGGTGATCCTCCAGCTGGAATTATCACTCAAAAGAAAGAGAAAGTAGATTACTTGAAGATGATTGCTGACTTATGTTATACATTTGCCATCAAACCCTCAACTATTGACGTTGCTCTTAAAGATGAATATTGGATTAACGTAATGCAAGAAGAACTACTCCAATTCATGAGAAACAATGTCTAG
Coding sequence (CDS)
ATGCTTCAAGAAATGGCTCGAGTTATGATACATCCCAAAAATTTACCTCTGCATTTTTGGGCAGAAGCTGTTAACACAACGTGTCACATTCACAACAGGATTACTACTCGATCTGGAACGACTGTCACGTTATATGAACTTTGGAATGGAAGAAAGTTGAACGTAAAGTATTTTCATGTTTTTGGAAATACTTGTTATATTCTAGCTAATAGAGAATATCATCGAAAGTGGGATGTGAAATTAGAACAAGGAATCTTTCTTGAATATTCTCATAATAGTCGTGCTTATAGAGTCTTTAATATTAAATCTGGTATAGTTATGGAAACGATCAATGTTGTGGTAAATGATTTTGAATCAACTGACAATCAAATTAATGATGAGGATGATGAGACTGTAAATATACCTGTGGATAATTCACTGTGTTCTGTGGAGGTACCTAAAGCTGATGCTTTAATAGATGGTTCTGGTATAAACTCAGAAAAGATATCTAAGGAAGTTATAGCTGATAATCTTGAGTTTGTTCCTTTTGCACATGTGAAGAAGAATCATCCATCAAGTTCTATAATAGGTGATCCTCCAGCTGGAATTATCACTCAAAAGAAAGAGAAAGTAGATTACTTGAAGATGATTGCTGACTTATGTTATACATTTGCCATCAAACCCTCAACTATTGACGTTGCTCTTAAAGATGAATATTGGATTAACGTAATGCAAGAAGAACTACTCCAATTCATGAGAAACAATGTCTAG
Protein sequence
MLQEMARVMIHPKNLPLHFWAEAVNTTCHIHNRITTRSGTTVTLYELWNGRKLNVKYFHVFGNTCYILANREYHRKWDVKLEQGIFLEYSHNSRAYRVFNIKSGIVMETINVVVNDFESTDNQINDEDDETVNIPVDNSLCSVEVPKADALIDGSGINSEKISKEVIADNLEFVPFAHVKKNHPSSSIIGDPPAGIITQKKEKVDYLKMIADLCYTFAIKPSTIDVALKDEYWINVMQEELLQFMRNNV
Homology
BLAST of Cmc07g0190801 vs. NCBI nr
Match:
KAA0064117.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYK28621.1 gag-pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 482.3 bits (1240), Expect = 2.6e-132
Identity = 239/248 (96.37%), Postives = 241/248 (97.18%), Query Frame = 0
Query: 2 LQEMARVMIHPKNLPLHFWAEAVNTTCHIHNRITTRSGTTVTLYELWNGRKLNVKYFHVF 61
LQEMARVMIHPKNLPLHF AEA+NT CHIHNRITTRSG TVTLYELWNGRKLNVKYFHVF
Sbjct: 222 LQEMARVMIHPKNLPLHFLAEAINTACHIHNRITTRSGMTVTLYELWNGRKLNVKYFHVF 281
Query: 62 GNTCYILANREYHRKWDVKLEQGIFLEYSHNSRAYRVFNIKSGIVMETINVVVNDFESTD 121
GNTCYILA+REYHRKWDVKLEQGIFLEYSHNS AYRVFNIKSGIVMETINVVVNDFESTD
Sbjct: 282 GNTCYILADREYHRKWDVKLEQGIFLEYSHNSCAYRVFNIKSGIVMETINVVVNDFESTD 341
Query: 122 NQINDEDDETVNIPVDNSLCSVEVPKADALIDGSGINSEKISKEVIADNLEFVPFAHVKK 181
NQINDEDDETVNIPVDNSLCSVEVPKADALIDGSGINSEKISKEVIADNLEFVP HVKK
Sbjct: 342 NQINDEDDETVNIPVDNSLCSVEVPKADALIDGSGINSEKISKEVIADNLEFVPSTHVKK 401
Query: 182 NHPSSSIIGDPPAGIITQKKEKVDYLKMIADLCYTFAIKPSTIDVALKDEYWINVMQEEL 241
NHPSSSIIGDPPA IITQKKEKVDYLKMIADLCYTFAIKPSTIDVALKDEYWINVMQEEL
Sbjct: 402 NHPSSSIIGDPPAKIITQKKEKVDYLKMIADLCYTFAIKPSTIDVALKDEYWINVMQEEL 461
Query: 242 LQFMRNNV 250
LQFMRNNV
Sbjct: 462 LQFMRNNV 469
BLAST of Cmc07g0190801 vs. NCBI nr
Match:
TYK11800.1 (gag-pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 372.9 bits (956), Expect = 2.2e-99
Identity = 190/248 (76.61%), Postives = 206/248 (83.06%), Query Frame = 0
Query: 2 LQEMARVMIHPKNLPLHFWAEAVNTTCHIHNRITTRSGTTVTLYELWNGRKLNVKYFHVF 61
LQEMARVMIH K+LPL+FWAEAVNT CHIH+RITTRSGT VTLYELWNGRKLNVKYFHVF
Sbjct: 13 LQEMARVMIHAKHLPLNFWAEAVNTVCHIHDRITTRSGTGVTLYELWNGRKLNVKYFHVF 72
Query: 62 GNTCYILANREYHRKWDVKLEQGIFLEYSHNSRAYRVFNIKSGIVMETINVVVNDFESTD 121
G+TCYILANREYHRKWDVK +QGIFL YS NSRAYRVFN SG VMETIN +VNDFES
Sbjct: 73 GSTCYILANREYHRKWDVKSKQGIFLGYSQNSRAYRVFNSISGTVMETINGLVNDFESAA 132
Query: 122 NQINDEDDETVNIPVDNSLCSVEVPKADALIDGSGINSEKISKEVIADNLEFVPFAHVKK 181
Q DEDDET+NI +D+ S +V KAD DG+ INS SKEVIADN E V AH++K
Sbjct: 133 TQTYDEDDETLNIRLDS---STKVLKADPQADGTSINSNTTSKEVIADNSELVSSAHMRK 192
Query: 182 NHPSSSIIGDPPAGIITQKKEKVDYLKMIADLCYTFAIKPSTIDVALKDEYWINVMQEEL 241
NHP SSIIGDP A I T+KKEKVDY KMIADLCYT I+PST+ VALKDEYWIN MQEEL
Sbjct: 193 NHPPSSIIGDPSAAITTRKKEKVDYSKMIADLCYTSTIEPSTVIVALKDEYWINAMQEEL 252
Query: 242 LQFMRNNV 250
LQF RNNV
Sbjct: 253 LQFRRNNV 257
BLAST of Cmc07g0190801 vs. NCBI nr
Match:
KAA0039208.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYK18475.1 gag-pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 354.0 bits (907), Expect = 1.1e-93
Identity = 180/249 (72.29%), Postives = 193/249 (77.51%), Query Frame = 0
Query: 1 MLQEMARVMIHPKNLPLHFWAEAVNTTCHIHNRITTRSGTTVTLYELWNGRKLNVKYFHV 60
MLQEMARVMIH KNL LHFWA+A+NT CHIHNRI TRSGTT LYELW GRK NVKYFHV
Sbjct: 1 MLQEMARVMIHAKNLALHFWAKAINTACHIHNRIATRSGTTFALYELWKGRKPNVKYFHV 60
Query: 61 FGNTCYILANREYHRKWDVKLEQGIFLEYSHNSRAYRVFNIKSGIVMETINVVVNDFEST 120
F +TCYILA+REYHRKWDVK +QGIFL SHNSRAYR+FNIKSG VME INVVVNDFEST
Sbjct: 61 FASTCYILADREYHRKWDVKSKQGIFLGCSHNSRAYRIFNIKSGTVMEMINVVVNDFEST 120
Query: 121 DNQINDEDDETVNIPVDNSLCSVEVPKADALIDGSGINSEKISKEVIADNLEFVPFAHVK 180
DNQINDEDDETVNIPVDNSLC VEVPKADALIDG+
Sbjct: 121 DNQINDEDDETVNIPVDNSLCPVEVPKADALIDGA------------------------- 180
Query: 181 KNHPSSSIIGDPPAGIITQKKEKVDYLKMIADLCYTFAIKPSTIDVALKDEYWINVMQEE 240
GDP AGIITQKKE+VDYLKMIA+LCYT I+PST+D+A KDE WIN MQEE
Sbjct: 181 ---------GDPSAGIITQKKEEVDYLKMIANLCYTSTIEPSTVDIAFKDENWINAMQEE 215
Query: 241 LLQFMRNNV 250
LL+F RNNV
Sbjct: 241 LLRFRRNNV 215
BLAST of Cmc07g0190801 vs. NCBI nr
Match:
KAA0060126.1 (gag-pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 331.3 bits (848), Expect = 7.4e-87
Identity = 167/241 (69.29%), Postives = 193/241 (80.08%), Query Frame = 0
Query: 2 LQEMARVMIHPKNLPLHFWAEAVNTTCHIHNRITTRSGTTVTLYELWNGRKLNVKYFHVF 61
LQEMARVMIH KNLPL+FWAEAVNT CHIH+R+TTRSGTTVTLYELW GRK N+KYFH+F
Sbjct: 597 LQEMARVMIHAKNLPLNFWAEAVNTACHIHDRVTTRSGTTVTLYELWKGRKPNIKYFHIF 656
Query: 62 GNTCYILANREYHRKWDVKLEQGIFLEYSHNSRAYRVFNIKSGIVMETINVVVNDFESTD 121
G+ CYILA+R+YHRKWDVK +Q IFL YS NSRAYRVFNIKSG VMETINVVVNDFES
Sbjct: 657 GSICYILADRKYHRKWDVKSDQEIFLGYSQNSRAYRVFNIKSGTVMETINVVVNDFESNI 716
Query: 122 NQINDEDDETVNIPVDNSLCSVEVPKADALIDGSGINSEKISKEVIADNLEFVPFAHVKK 181
NQ N E+DET P S E+ K ++ +D + S I+ EVI + VP AHVKK
Sbjct: 717 NQFNIENDETHVTPEVTSTPLDEMSKGESQLDSAKTYS-SITDEVINNETVLVPSAHVKK 776
Query: 182 NHPSSSIIGDPPAGIITQKKEKVDYLKMIADLCYTFAIKPSTIDVALKDEYWINVMQEEL 241
NHP SS+IGDP AGI T++KEKVDY KMIADLCY AI+P++++ ALKDEYWIN MQ+EL
Sbjct: 777 NHPLSSLIGDPSAGITTRRKEKVDYTKMIADLCYVSAIEPTSVENALKDEYWINAMQKEL 836
Query: 242 L 243
L
Sbjct: 837 L 836
BLAST of Cmc07g0190801 vs. NCBI nr
Match:
KAA0042995.1 (gag-pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 330.9 bits (847), Expect = 9.7e-87
Identity = 161/248 (64.92%), Postives = 196/248 (79.03%), Query Frame = 0
Query: 2 LQEMARVMIHPKNLPLHFWAEAVNTTCHIHNRITTRSGTTVTLYELWNGRKLNVKYFHVF 61
LQEMARVMIH KNLPL F+AEAVNT CHIHNR+T R+GTT+TLYE W RKLNVKYFHVF
Sbjct: 726 LQEMARVMIHAKNLPLCFFAEAVNTACHIHNRVTIRTGTTITLYEHWKERKLNVKYFHVF 785
Query: 62 GNTCYILANREYHRKWDVKLEQGIFLEYSHNSRAYRVFNIKSGIVMETINVVVNDFESTD 121
G+TCYILA+REYH+KWD + EQGIFL YS SRAYRV+N +S VMETIN +ND +S
Sbjct: 786 GSTCYILADREYHKKWDARSEQGIFLRYSQISRAYRVYNNRSDSVMETINEFINDLDSAI 845
Query: 122 NQINDEDDETVNIPVDNSLCSVEVPKADALIDGSGINSEKISKEVIADNLEFVPFAHVKK 181
+NDE+DET N+ + +VE KAD DG G + +K S+E+I LE +P AHV+K
Sbjct: 846 KLMNDEEDETPNMSEVRTTSTVEESKADNSSDGPGKSLKKSSEEIINKKLELIPSAHVEK 905
Query: 182 NHPSSSIIGDPPAGIITQKKEKVDYLKMIADLCYTFAIKPSTIDVALKDEYWINVMQEEL 241
NHP+ SIIGDP AG+ T++K+K+DYLKM+A+LCY I+PST+D ALK+EYW+N MQEEL
Sbjct: 906 NHPARSIIGDPSAGMQTRRKDKIDYLKMVANLCYISTIEPSTVDSALKNEYWLNAMQEEL 965
Query: 242 LQFMRNNV 250
LQF RNNV
Sbjct: 966 LQFKRNNV 973
BLAST of Cmc07g0190801 vs. ExPASy TrEMBL
Match:
A0A5A7VAS8 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2030G00390 PE=4 SV=1)
HSP 1 Score: 482.3 bits (1240), Expect = 1.3e-132
Identity = 239/248 (96.37%), Postives = 241/248 (97.18%), Query Frame = 0
Query: 2 LQEMARVMIHPKNLPLHFWAEAVNTTCHIHNRITTRSGTTVTLYELWNGRKLNVKYFHVF 61
LQEMARVMIHPKNLPLHF AEA+NT CHIHNRITTRSG TVTLYELWNGRKLNVKYFHVF
Sbjct: 222 LQEMARVMIHPKNLPLHFLAEAINTACHIHNRITTRSGMTVTLYELWNGRKLNVKYFHVF 281
Query: 62 GNTCYILANREYHRKWDVKLEQGIFLEYSHNSRAYRVFNIKSGIVMETINVVVNDFESTD 121
GNTCYILA+REYHRKWDVKLEQGIFLEYSHNS AYRVFNIKSGIVMETINVVVNDFESTD
Sbjct: 282 GNTCYILADREYHRKWDVKLEQGIFLEYSHNSCAYRVFNIKSGIVMETINVVVNDFESTD 341
Query: 122 NQINDEDDETVNIPVDNSLCSVEVPKADALIDGSGINSEKISKEVIADNLEFVPFAHVKK 181
NQINDEDDETVNIPVDNSLCSVEVPKADALIDGSGINSEKISKEVIADNLEFVP HVKK
Sbjct: 342 NQINDEDDETVNIPVDNSLCSVEVPKADALIDGSGINSEKISKEVIADNLEFVPSTHVKK 401
Query: 182 NHPSSSIIGDPPAGIITQKKEKVDYLKMIADLCYTFAIKPSTIDVALKDEYWINVMQEEL 241
NHPSSSIIGDPPA IITQKKEKVDYLKMIADLCYTFAIKPSTIDVALKDEYWINVMQEEL
Sbjct: 402 NHPSSSIIGDPPAKIITQKKEKVDYLKMIADLCYTFAIKPSTIDVALKDEYWINVMQEEL 461
Query: 242 LQFMRNNV 250
LQFMRNNV
Sbjct: 462 LQFMRNNV 469
BLAST of Cmc07g0190801 vs. ExPASy TrEMBL
Match:
A0A5D3CK56 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold152G00110 PE=4 SV=1)
HSP 1 Score: 372.9 bits (956), Expect = 1.1e-99
Identity = 190/248 (76.61%), Postives = 206/248 (83.06%), Query Frame = 0
Query: 2 LQEMARVMIHPKNLPLHFWAEAVNTTCHIHNRITTRSGTTVTLYELWNGRKLNVKYFHVF 61
LQEMARVMIH K+LPL+FWAEAVNT CHIH+RITTRSGT VTLYELWNGRKLNVKYFHVF
Sbjct: 13 LQEMARVMIHAKHLPLNFWAEAVNTVCHIHDRITTRSGTGVTLYELWNGRKLNVKYFHVF 72
Query: 62 GNTCYILANREYHRKWDVKLEQGIFLEYSHNSRAYRVFNIKSGIVMETINVVVNDFESTD 121
G+TCYILANREYHRKWDVK +QGIFL YS NSRAYRVFN SG VMETIN +VNDFES
Sbjct: 73 GSTCYILANREYHRKWDVKSKQGIFLGYSQNSRAYRVFNSISGTVMETINGLVNDFESAA 132
Query: 122 NQINDEDDETVNIPVDNSLCSVEVPKADALIDGSGINSEKISKEVIADNLEFVPFAHVKK 181
Q DEDDET+NI +D+ S +V KAD DG+ INS SKEVIADN E V AH++K
Sbjct: 133 TQTYDEDDETLNIRLDS---STKVLKADPQADGTSINSNTTSKEVIADNSELVSSAHMRK 192
Query: 182 NHPSSSIIGDPPAGIITQKKEKVDYLKMIADLCYTFAIKPSTIDVALKDEYWINVMQEEL 241
NHP SSIIGDP A I T+KKEKVDY KMIADLCYT I+PST+ VALKDEYWIN MQEEL
Sbjct: 193 NHPPSSIIGDPSAAITTRKKEKVDYSKMIADLCYTSTIEPSTVIVALKDEYWINAMQEEL 252
Query: 242 LQFMRNNV 250
LQF RNNV
Sbjct: 253 LQFRRNNV 257
BLAST of Cmc07g0190801 vs. ExPASy TrEMBL
Match:
A0A5D3D4K0 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold607G00460 PE=4 SV=1)
HSP 1 Score: 354.0 bits (907), Expect = 5.2e-94
Identity = 180/249 (72.29%), Postives = 193/249 (77.51%), Query Frame = 0
Query: 1 MLQEMARVMIHPKNLPLHFWAEAVNTTCHIHNRITTRSGTTVTLYELWNGRKLNVKYFHV 60
MLQEMARVMIH KNL LHFWA+A+NT CHIHNRI TRSGTT LYELW GRK NVKYFHV
Sbjct: 1 MLQEMARVMIHAKNLALHFWAKAINTACHIHNRIATRSGTTFALYELWKGRKPNVKYFHV 60
Query: 61 FGNTCYILANREYHRKWDVKLEQGIFLEYSHNSRAYRVFNIKSGIVMETINVVVNDFEST 120
F +TCYILA+REYHRKWDVK +QGIFL SHNSRAYR+FNIKSG VME INVVVNDFEST
Sbjct: 61 FASTCYILADREYHRKWDVKSKQGIFLGCSHNSRAYRIFNIKSGTVMEMINVVVNDFEST 120
Query: 121 DNQINDEDDETVNIPVDNSLCSVEVPKADALIDGSGINSEKISKEVIADNLEFVPFAHVK 180
DNQINDEDDETVNIPVDNSLC VEVPKADALIDG+
Sbjct: 121 DNQINDEDDETVNIPVDNSLCPVEVPKADALIDGA------------------------- 180
Query: 181 KNHPSSSIIGDPPAGIITQKKEKVDYLKMIADLCYTFAIKPSTIDVALKDEYWINVMQEE 240
GDP AGIITQKKE+VDYLKMIA+LCYT I+PST+D+A KDE WIN MQEE
Sbjct: 181 ---------GDPSAGIITQKKEEVDYLKMIANLCYTSTIEPSTVDIAFKDENWINAMQEE 215
Query: 241 LLQFMRNNV 250
LL+F RNNV
Sbjct: 241 LLRFRRNNV 215
BLAST of Cmc07g0190801 vs. ExPASy TrEMBL
Match:
A0A5A7V0X1 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold39G00460 PE=4 SV=1)
HSP 1 Score: 331.3 bits (848), Expect = 3.6e-87
Identity = 167/241 (69.29%), Postives = 193/241 (80.08%), Query Frame = 0
Query: 2 LQEMARVMIHPKNLPLHFWAEAVNTTCHIHNRITTRSGTTVTLYELWNGRKLNVKYFHVF 61
LQEMARVMIH KNLPL+FWAEAVNT CHIH+R+TTRSGTTVTLYELW GRK N+KYFH+F
Sbjct: 597 LQEMARVMIHAKNLPLNFWAEAVNTACHIHDRVTTRSGTTVTLYELWKGRKPNIKYFHIF 656
Query: 62 GNTCYILANREYHRKWDVKLEQGIFLEYSHNSRAYRVFNIKSGIVMETINVVVNDFESTD 121
G+ CYILA+R+YHRKWDVK +Q IFL YS NSRAYRVFNIKSG VMETINVVVNDFES
Sbjct: 657 GSICYILADRKYHRKWDVKSDQEIFLGYSQNSRAYRVFNIKSGTVMETINVVVNDFESNI 716
Query: 122 NQINDEDDETVNIPVDNSLCSVEVPKADALIDGSGINSEKISKEVIADNLEFVPFAHVKK 181
NQ N E+DET P S E+ K ++ +D + S I+ EVI + VP AHVKK
Sbjct: 717 NQFNIENDETHVTPEVTSTPLDEMSKGESQLDSAKTYS-SITDEVINNETVLVPSAHVKK 776
Query: 182 NHPSSSIIGDPPAGIITQKKEKVDYLKMIADLCYTFAIKPSTIDVALKDEYWINVMQEEL 241
NHP SS+IGDP AGI T++KEKVDY KMIADLCY AI+P++++ ALKDEYWIN MQ+EL
Sbjct: 777 NHPLSSLIGDPSAGITTRRKEKVDYTKMIADLCYVSAIEPTSVENALKDEYWINAMQKEL 836
Query: 242 L 243
L
Sbjct: 837 L 836
BLAST of Cmc07g0190801 vs. ExPASy TrEMBL
Match:
A0A5A7TNK7 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold75G00690 PE=4 SV=1)
HSP 1 Score: 330.9 bits (847), Expect = 4.7e-87
Identity = 161/248 (64.92%), Postives = 196/248 (79.03%), Query Frame = 0
Query: 2 LQEMARVMIHPKNLPLHFWAEAVNTTCHIHNRITTRSGTTVTLYELWNGRKLNVKYFHVF 61
LQEMARVMIH KNLPL F+AEAVNT CHIHNR+T R+GTT+TLYE W RKLNVKYFHVF
Sbjct: 726 LQEMARVMIHAKNLPLCFFAEAVNTACHIHNRVTIRTGTTITLYEHWKERKLNVKYFHVF 785
Query: 62 GNTCYILANREYHRKWDVKLEQGIFLEYSHNSRAYRVFNIKSGIVMETINVVVNDFESTD 121
G+TCYILA+REYH+KWD + EQGIFL YS SRAYRV+N +S VMETIN +ND +S
Sbjct: 786 GSTCYILADREYHKKWDARSEQGIFLRYSQISRAYRVYNNRSDSVMETINEFINDLDSAI 845
Query: 122 NQINDEDDETVNIPVDNSLCSVEVPKADALIDGSGINSEKISKEVIADNLEFVPFAHVKK 181
+NDE+DET N+ + +VE KAD DG G + +K S+E+I LE +P AHV+K
Sbjct: 846 KLMNDEEDETPNMSEVRTTSTVEESKADNSSDGPGKSLKKSSEEIINKKLELIPSAHVEK 905
Query: 182 NHPSSSIIGDPPAGIITQKKEKVDYLKMIADLCYTFAIKPSTIDVALKDEYWINVMQEEL 241
NHP+ SIIGDP AG+ T++K+K+DYLKM+A+LCY I+PST+D ALK+EYW+N MQEEL
Sbjct: 906 NHPARSIIGDPSAGMQTRRKDKIDYLKMVANLCYISTIEPSTVDSALKNEYWLNAMQEEL 965
Query: 242 LQFMRNNV 250
LQF RNNV
Sbjct: 966 LQFKRNNV 973
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAA0064117.1 | 2.6e-132 | 96.37 | gag-pol polyprotein [Cucumis melo var. makuwa] >TYK28621.1 gag-pol polyprotein [... | [more] |
| TYK11800.1 | 2.2e-99 | 76.61 | gag-pol polyprotein [Cucumis melo var. makuwa] | [more] |
| KAA0039208.1 | 1.1e-93 | 72.29 | gag-pol polyprotein [Cucumis melo var. makuwa] >TYK18475.1 gag-pol polyprotein [... | [more] |
| KAA0060126.1 | 7.4e-87 | 69.29 | gag-pol polyprotein [Cucumis melo var. makuwa] | [more] |
| KAA0042995.1 | 9.7e-87 | 64.92 | gag-pol polyprotein [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7VAS8 | 1.3e-132 | 96.37 | Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2030... | [more] |
| A0A5D3CK56 | 1.1e-99 | 76.61 | Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold152G... | [more] |
| A0A5D3D4K0 | 5.2e-94 | 72.29 | Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold607G... | [more] |
| A0A5A7V0X1 | 3.6e-87 | 69.29 | Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold39G0... | [more] |
| A0A5A7TNK7 | 4.7e-87 | 64.92 | Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold75G0... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
