Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGGCCTAATTCCCTTCGTTTACAGAGCGATTGTTCATTACAAGAACGACAAACAAGTCCCGCCGATCCGATCTTGGCTTAGCGATTCGCCGTCGGCGTCGTATATCAGACTTCCGAGCGGCGATTCCGGCCGATTCCTTTTCCAATCAGAGGGTTCATATACGGCCACCTCACCTTCGAAATCCGCCTCTTCCACTGCCACCCAGATTCTCGTTGCTACCGGAGTTCAGTCGCCGCTCCGCCCGCTGGCCCCTCGTCGAGTCGCCGCCTGA
mRNA sequence
ATGGAAGGCCTAATTCCCTTCGTTTACAGAGCGATTGTTCATTACAAGAACGACAAACAAGTCCCGCCGATCCGATCTTGGCTTAGCGATTCGCCGTCGGCGTCGTATATCAGACTTCCGAGCGGCGATTCCGGCCGATTCCTTTTCCAATCAGAGGGTTCATATACGGCCACCTCACCTTCGAAATCCGCCTCTTCCACTGCCACCCAGATTCTCGTTGCTACCGGAGTTCAGTCGCCGCTCCGCCCGCTGGCCCCTCGTCGAGTCGCCGCCTGA
Coding sequence (CDS)
ATGGAAGGCCTAATTCCCTTCGTTTACAGAGCGATTGTTCATTACAAGAACGACAAACAAGTCCCGCCGATCCGATCTTGGCTTAGCGATTCGCCGTCGGCGTCGTATATCAGACTTCCGAGCGGCGATTCCGGCCGATTCCTTTTCCAATCAGAGGGTTCATATACGGCCACCTCACCTTCGAAATCCGCCTCTTCCACTGCCACCCAGATTCTCGTTGCTACCGGAGTTCAGTCGCCGCTCCGCCCGCTGGCCCCTCGTCGAGTCGCCGCCTGA
Protein sequence
MEGLIPFVYRAIVHYKNDKQVPPIRSWLSDSPSASYIRLPSGDSGRFLFQSEGSYTATSPSKSASSTATQILVATGVQSPLRPLAPRRVAA
Homology
BLAST of CmaCh06G002780 vs. ExPASy TrEMBL
Match:
A0A5D3DNC7 (Legume-specific protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001410 PE=4 SV=1)
HSP 1 Score: 129.4 bits (324), Expect = 7.6e-27
Identity = 69/91 (75.82%), Postives = 78/91 (85.71%), Query Frame = 0
Query: 1 MEGLIPFVYRAIVHYKNDKQVPPIRSWLSDSPSASYIRLPSGDSGRFLFQSEGSYTATSP 60
MEGLIPFVY+AIV YKN+KQVP IRSWL DSPS SYIRLPSGDSGRF FQS+ S ++ SP
Sbjct: 1 MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSP 60
Query: 61 SKSASSTATQILVATGVQSPLRPLAPRRVAA 92
++S+TATQILV+TGVQSPLR L RRVAA
Sbjct: 61 --TSSTTATQILVSTGVQSPLRHLTTRRVAA 89
BLAST of CmaCh06G002780 vs. ExPASy TrEMBL
Match:
A0A0A0LD26 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G733930 PE=4 SV=1)
HSP 1 Score: 128.6 bits (322), Expect = 1.3e-26
Identity = 69/91 (75.82%), Postives = 76/91 (83.52%), Query Frame = 0
Query: 1 MEGLIPFVYRAIVHYKNDKQVPPIRSWLSDSPSASYIRLPSGDSGRFLFQSEGSYTATSP 60
MEGLIPFVY+AIV YKN+KQVP IRSWL DSPS SYIRLPSGDSGRF FQS+ S ++ SP
Sbjct: 1 MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSP 60
Query: 61 SKSASSTATQILVATGVQSPLRPLAPRRVAA 92
+ SST TQILV+TGVQSPLR L RRVAA
Sbjct: 61 T---SSTTTQILVSTGVQSPLRHLTTRRVAA 88
BLAST of CmaCh06G002780 vs. ExPASy TrEMBL
Match:
K7MT87 (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_18G187300 PE=4 SV=1)
HSP 1 Score: 102.1 bits (253), Expect = 1.3e-18
Identity = 57/94 (60.64%), Postives = 72/94 (76.60%), Query Frame = 0
Query: 1 MEGLIPFVYRAIVHYKNDKQVPPIRSWLSDSPSASYIRLPSGDSGRFLFQS-EGSYTATS 60
MEGLIPFVY+AI+ YK DK PI SWL +SPS SY+RLP+GDSGRF Q+ S++A S
Sbjct: 1 MEGLIPFVYKAIMQYKGDKDGHPIGSWLCESPSYSYMRLPAGDSGRFQIQAPASSFSAAS 60
Query: 61 PSKS--ASSTATQILVATGVQSPLRPLAPRRVAA 92
PS + SS+ATQI+V++GVQSP + L RR+AA
Sbjct: 61 PSSTNPNSSSATQIIVSSGVQSPHQCLTHRRIAA 94
BLAST of CmaCh06G002780 vs. ExPASy TrEMBL
Match:
A0A6J1AT90 (uncharacterized protein LOC110420657 OS=Herrania umbratica OX=108875 GN=LOC110420657 PE=4 SV=1)
HSP 1 Score: 100.1 bits (248), Expect = 4.9e-18
Identity = 56/98 (57.14%), Postives = 75/98 (76.53%), Query Frame = 0
Query: 1 MEGLIPFVYRAIVHYKNDKQVPPIRSWLSDSPSASYIRLPSGDSGRF------LFQSE-G 60
MEGLIPFVYRAIV YKN ++ + +W S+SPSASY+RLP+GDSGRF +FQS+ G
Sbjct: 1 MEGLIPFVYRAIVQYKNGRE-GVLATWFSESPSASYMRLPTGDSGRFQVSDKQVFQSDYG 60
Query: 61 SYTATSPSKSASSTATQILVATGVQSPLRPLAPRRVAA 92
++A+SPS A+S+ T+I+++TGVQSP+ L RRV A
Sbjct: 61 DFSASSPSSMATSSTTKIILSTGVQSPVCRLTSRRVVA 97
BLAST of CmaCh06G002780 vs. ExPASy TrEMBL
Match:
A0A061EYS9 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_021870 PE=4 SV=1)
HSP 1 Score: 99.8 bits (247), Expect = 6.4e-18
Identity = 56/98 (57.14%), Postives = 75/98 (76.53%), Query Frame = 0
Query: 1 MEGLIPFVYRAIVHYKNDKQVPPIRSWLSDSPSASYIRLPSGDSGRF------LFQSE-G 60
MEGLIPFVYRAIV +KN ++ + +W S+SPSASY+RLP+GDSGRF +FQS+ G
Sbjct: 1 MEGLIPFVYRAIVQHKNGRE-GVLATWFSESPSASYMRLPTGDSGRFQVSDKQVFQSDYG 60
Query: 61 SYTATSPSKSASSTATQILVATGVQSPLRPLAPRRVAA 92
++A+SPS A+S+ TQI+++TGVQSP+ L RRV A
Sbjct: 61 DFSASSPSSMAASSTTQIILSTGVQSPVCRLTSRRVVA 97
BLAST of CmaCh06G002780 vs. NCBI nr
Match:
KAG6596392.1 (hypothetical protein SDJN03_09572, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 168.3 bits (425), Expect = 3.0e-38
Identity = 86/91 (94.51%), Postives = 88/91 (96.70%), Query Frame = 0
Query: 1 MEGLIPFVYRAIVHYKNDKQVPPIRSWLSDSPSASYIRLPSGDSGRFLFQSEGSYTATSP 60
MEGLIPFVYRAIVHYKNDKQVPPIRSWL+DSPSASYIRLPSGDSGRFLFQS+GSYTATSP
Sbjct: 1 MEGLIPFVYRAIVHYKNDKQVPPIRSWLTDSPSASYIRLPSGDSGRFLFQSDGSYTATSP 60
Query: 61 SKSASSTATQILVATGVQSPLRPLAPRRVAA 92
SKS SSTATQILVATGVQSPLR LAP RVAA
Sbjct: 61 SKSVSSTATQILVATGVQSPLRQLAPSRVAA 91
BLAST of CmaCh06G002780 vs. NCBI nr
Match:
KAG7027938.1 (hypothetical protein SDJN02_09117, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 166.8 bits (421), Expect = 8.8e-38
Identity = 86/91 (94.51%), Postives = 87/91 (95.60%), Query Frame = 0
Query: 1 MEGLIPFVYRAIVHYKNDKQVPPIRSWLSDSPSASYIRLPSGDSGRFLFQSEGSYTATSP 60
MEGLIPFVYRAIVHYKNDKQVPPIRSWL+DSPSASYIRLPSGDSGRFLFQS GSYTATSP
Sbjct: 1 MEGLIPFVYRAIVHYKNDKQVPPIRSWLTDSPSASYIRLPSGDSGRFLFQSGGSYTATSP 60
Query: 61 SKSASSTATQILVATGVQSPLRPLAPRRVAA 92
SKS SSTATQILVATGVQSPLR LAP RVAA
Sbjct: 61 SKSVSSTATQILVATGVQSPLRQLAPSRVAA 91
BLAST of CmaCh06G002780 vs. NCBI nr
Match:
KAG7017269.1 (hypothetical protein SDJN02_19132, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 134.0 bits (336), Expect = 6.3e-28
Identity = 72/92 (78.26%), Postives = 79/92 (85.87%), Query Frame = 0
Query: 1 MEGLIPFVYRAIVHYKNDKQVPPIRSWLSDSPSASYIRLPSGDSGRFLFQSEGSYTATSP 60
MEG+IPFVY+AIV YKN+KQVP IRSWL DSPS SYIRLPSGDSGRF +GSY+A SP
Sbjct: 1 MEGIIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRF---QDGSYSAASP 60
Query: 61 -SKSASSTATQILVATGVQSPLRPLAPRRVAA 92
SKSASST TQIL++TGVQSPLR L PRRVAA
Sbjct: 61 SSKSASSTTTQILISTGVQSPLRHLTPRRVAA 89
BLAST of CmaCh06G002780 vs. NCBI nr
Match:
KAG6580521.1 (hypothetical protein SDJN03_20523, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 132.5 bits (332), Expect = 1.8e-27
Identity = 71/92 (77.17%), Postives = 78/92 (84.78%), Query Frame = 0
Query: 1 MEGLIPFVYRAIVHYKNDKQVPPIRSWLSDSPSASYIRLPSGDSGRFLFQSEGSYTATSP 60
MEG+IPFVY+AIV YKN+KQVP IRSWL DSPS SYIRLPSGDSGRF +GSY+A SP
Sbjct: 1 MEGIIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRF---QDGSYSAASP 60
Query: 61 -SKSASSTATQILVATGVQSPLRPLAPRRVAA 92
SKSASST TQIL++TGVQSPLR L PRRV A
Sbjct: 61 SSKSASSTTTQILISTGVQSPLRHLTPRRVVA 89
BLAST of CmaCh06G002780 vs. NCBI nr
Match:
KAA0044116.1 (legume-specific protein [Cucumis melo var. makuwa] >TYK25022.1 legume-specific protein [Cucumis melo var. makuwa])
HSP 1 Score: 129.4 bits (324), Expect = 1.6e-26
Identity = 69/91 (75.82%), Postives = 78/91 (85.71%), Query Frame = 0
Query: 1 MEGLIPFVYRAIVHYKNDKQVPPIRSWLSDSPSASYIRLPSGDSGRFLFQSEGSYTATSP 60
MEGLIPFVY+AIV YKN+KQVP IRSWL DSPS SYIRLPSGDSGRF FQS+ S ++ SP
Sbjct: 1 MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSP 60
Query: 61 SKSASSTATQILVATGVQSPLRPLAPRRVAA 92
++S+TATQILV+TGVQSPLR L RRVAA
Sbjct: 61 --TSSTTATQILVSTGVQSPLRHLTTRRVAA 89
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3DNC7 | 7.6e-27 | 75.82 | Legume-specific protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A0A0LD26 | 1.3e-26 | 75.82 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G733930 PE=4 SV=1 | [more] |
K7MT87 | 1.3e-18 | 60.64 | Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_18G187300 PE=4 SV=1 | [more] |
A0A6J1AT90 | 4.9e-18 | 57.14 | uncharacterized protein LOC110420657 OS=Herrania umbratica OX=108875 GN=LOC11042... | [more] |
A0A061EYS9 | 6.4e-18 | 57.14 | Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_021870 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
KAG6596392.1 | 3.0e-38 | 94.51 | hypothetical protein SDJN03_09572, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG7027938.1 | 8.8e-38 | 94.51 | hypothetical protein SDJN02_09117, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
KAG7017269.1 | 6.3e-28 | 78.26 | hypothetical protein SDJN02_19132, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
KAG6580521.1 | 1.8e-27 | 77.17 | hypothetical protein SDJN03_20523, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAA0044116.1 | 1.6e-26 | 75.82 | legume-specific protein [Cucumis melo var. makuwa] >TYK25022.1 legume-specific p... | [more] |
Match Name | E-value | Identity | Description | |