CmaCh01G013170 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh01G013170
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Unknown protein
Location	Cma_Chr01: 9398013 .. 9401902 (-)
RNA-Seq Expression	CmaCh01G013170
Synteny	CmaCh01G013170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCGAACCTCTGAACAAGGTATTCTTCGCCAGGTCTTAACCATTCCCTACAAAACCAAGCACAAAACATTCAATAAAATGTCATTTACATTTGGCTCTTAAAATCATTAAGAACTTTTATCTTCATCTTTCACGATCTCCCCCTATTCATCCTCTTTTTGCATTTTTATCTATATCTACGACCACTTTTTTTCTAGCTCCCAATACATTTTCTCTTTTAACTTCTTTACCCTTCTCCCATTAGTATCGTGCCAAATACTAAGCTACTTAAGACATACTCTCGATCAAGAAGTTAGACAATCGAATCTTACTTAGAATTCTTATTTCCATCATAGATTTTTACTTGTAATCGTTTAAACCGAACCCTTGTTCTTAAAGTTGGTGAAATTACTAATCACAAGGCAAGAGAAGAATCAAGGAAGATCCTTTTACTTGTTTGTATATGTATTTAAAGCCATACAACTATTATCGTGAGTACTGGTTCTTTTGGCTTGAGTTGAATACATTTATCTACTTTATTTTGTCAAGGTTAAGCCTTCTATGATTTGATTTTGAATGCTTGGTTAGTACAATTTCAGGTGATTCCAGAACAAATCTTTAGCTCTAAATAGGTACTGATTTCACTAAGTATCCAAATCTAGATTAATTAATCCCTTAAACAGGTTATATGTATAGAGACAAAAAAGTTCTGTGAACAATAGATATTTAATTTTTCATTGTGAAGGGGAGAGCGCAAAAATAACACTAAGTCAAAGCACTTACTCCACAGAATGATCAGCAAACTCAAAACGACCAACAAGGCCAGGTCCTCCAACTCTTGGATGCTGAAATATCATAAGGTTGCAAAGGTAAATGTCAATCAGATAAATTAGATTGTTCAAAGTGAGTGAATGCAGAAAGAGCAGCAAAGCTGTGGTGCCAAGGTTAATGGGATAGGAAGGAAGCAATAATCATGTGCTATCTAACCTGTGGTGCCAAGGTTAAGAACTTGTACGTATCCAAAGCATATCGTACCAAAGCTTCATTCTCACCGGGGTTTATCGTACAGCTGGCAGTGTAAAAGTATTACACAAAAACTTCAGTTGAATATACTGACAACAAAATTCAGAATAATTTGATCTAAAAAAAATAAAAAATAAAAAAGTAAACTAGAAGCAGAAAATTTTGGGGTGTGAGCAAAGCCTCGCGAGGAGTATTAGTGGGGTGGATCACAGTATAACGTAATGGGAAGGACCAAACAACCCGTTTATTAAAACAGTTGCCACAAAATTACAAGAGCTCCTGAGTTGATAGCATAATTTAGGGGGAAAATGGATAGCGAGTTTGGCCCAAGTAAAAACATTGAAACGATTAATTTCCCGAACCTCCTCTACGTCGTTATTCCTATCTTAGAAGATCCTATCATCCCTTCCCATTTATTAACTAATAAAATATAGCCATGACTGCGAGATCTCAAAGAATGTTCTTTGAAGGGTGGCAACTATTTTAGTTCAAAAGCAGACGTTCTATCCAAATTGCATTAACTTGTGGCACACAACAAACAAGAAAAAGTATAGTGCTGCATACTCACGTTGAATATACAATGACTCCACCCGGCCGGACTAATTGGACAGCCTGATCAAACATGCGCCTCTGATACTTTGCATGGTGCTTCAACGACGCAAGGGTTTCCTGGCAAAGACAATATATCAATCTCAAGTTTCCAATCATCGAGGCTTTAGTGAATGAATTACACACCAGCATAATTTTGAAAAGAAATTAGATGGTACAAAGCCATTTCTCAACCAAACATTACAGATACACACATAAACATGCATTCAGTTAATCATTGAAGTGATTCTACCTCCCCAGCAAATAGTCGAGGTCTTAAACCGAGGGCCGAGCAAGGAGCGTCAAGAAGGACTCTGTCAAAGCTGTTGGGAGCAAAACCTTTCGAGTTTTCAGCTCTACCGCCCATGCATTGATTTCTTCCTGGACCATTTCGTGGTCTCTTACCATTGTTCCTCCCTTCAGCTTCATTAACAAAAGTTCTCTCATTCAGTTTTCCCACAGTCGATTAAAAAAAATATGAAACTGAATTTGCAATCACAGATAGAGAAACACACATATGATGCAGTCAAAGAGGTGAAACTAGAAAGAACAGAACTTTGGAAAATAACAGTTGTACAGATCTCAATCCAAGCTTGCTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTAAGAAACCGTGTTTTCATTGTGACAATTAAAAGAATATTGGGACACAAAAAAAACAAGCCCAAACAAATGTGTAACGAAACTAATTATAGGTCTTCAAGCTAAAGAACAAGACCAAGCTCATTATTACAATGTATATATATATATATATATTAAATCCTAGTCACCAAAGCCCAAAGGGAAGCATTCTTCAGAGNTCAATGTAAGTAATTTTTACGAAGGAAAAGTATAAAAAAGAGTCCAAAAAATAATATTCCTATACCCCAAAAAAAAAAAAAGAATCAAACTACACATTTCCAAACTTGGATAGTCAAGGACTTTCCAAAAGCAATCCTGATGTCAAAGTCTACCTATTTCATTCCACACTTAGAATATAGAATAAGCACGTGTGGAAGATGAATGCTGCATTTTATTCCTTGGATCCCAAGTTCAAACTCCTAGATCTGTAAGAAACTATTCCACAAGGCAGGATTCTATATGTATATATACATAAAACTATAAGTTTTTTAATATGAAACATTGACCAAAAGGGATGGGGAGGAAAGCTAAGAAACTATTAGCCCAGTAGTTTCTAAAAGTTATAAGAATAAAGATAACCTACCATTTTGCTTCCTAATCTTATCAACTTCCAATATTTCGGTAATTGAGGATGGTTTTTCATTGTCAAGATTCATTGAACTGGAACTATCATTCACAACACTGTCGTTGGCATCAACACAAACTGAATCAGAGCTTTTGCAGGAATCAGTCCTTCGATTGACAGATTTCAGAGCATCAAGCTTATAGGTTTTTATACAGCTCAACCCCATTTCAGCAGCCAGTTTCTGAATATTCATCACCTGAACGTGGGTTTGAGAAAGGTTAACAAAGCAAGCAGACCATTGAACTTAATCTACACTTTGGAAGAATAGTTTGCACAGTTTAAATCCAGGATATGAGAAACAGAACGGAATAATTGAAAACATCTTTGTCATATCTCCAAGTTCATAATTCTACCTTATTATGGGACCTATCAGCAGCAATGATCTCCCCTTCATCCTTCATAAGGATGGCAATTGCAGTTGTTTTTCCCCCAGGTGCCGCACACATGTCTAATATGCGTTCACCTTTTTGTGGATCTAAGGTGAAAAATCCAAAAAAGATATCCATTAGGAGGAAATCAAACCATCCATAGTTAGCAAAAGGAAAAACCAAAACAAAACAATGATCAATGTGAACAAAATAAATAGACATAATGGTGACAGTGAGAAAATGACGAGCTGGGAAAATTATATTAATTGTTAAAAAATCCTCATTATAAGTTTTAATCTGCTCAATTGATTTTAACCTCAAAATCGAGTGTCCTTCATGCAAGTACAGGAGATGAGCAATGAGAAACACAAAGCTCAAGACTTGTCTGATACTGGACTGAATGGAAGGAAGACCACCCGGATAGGAAGGTTGATAGCAAAACAGAAACTTTAA

mRNA sequence

ATGGATCGAACCTCTGAACAAGGTATTCTTCGCCAGGTCTTAACCATTCCCTACAAAACCAAGCACAAAACATTCAATAAAATGGGAGAGCGCAAAAATAACACTAAGTCAAAGCACTTACTCCACAGAATGATCAGCAAACTCAAAACGACCAACAAGGCCAGGTCCTCCAACTCTTGGATGCTGAAATATCATAAGGTTGCAAAGAAAGAGCAGCAAAGCTGTGGTGCCAAGGAGATGAGCAATGAGAAACACAAAGCTCAAGACTTGTCTGATACTGGACTGAATGGAAGGAAGACCACCCGGATAGGAAGGTTGATAGCAAAACAGAAACTTTAA

Coding sequence (CDS)

ATGGATCGAACCTCTGAACAAGGTATTCTTCGCCAGGTCTTAACCATTCCCTACAAAACCAAGCACAAAACATTCAATAAAATGGGAGAGCGCAAAAATAACACTAAGTCAAAGCACTTACTCCACAGAATGATCAGCAAACTCAAAACGACCAACAAGGCCAGGTCCTCCAACTCTTGGATGCTGAAATATCATAAGGTTGCAAAGAAAGAGCAGCAAAGCTGTGGTGCCAAGGAGATGAGCAATGAGAAACACAAAGCTCAAGACTTGTCTGATACTGGACTGAATGGAAGGAAGACCACCCGGATAGGAAGGTTGATAGCAAAACAGAAACTTTAA

Protein sequence

MDRTSEQGILRQVLTIPYKTKHKTFNKMGERKNNTKSKHLLHRMISKLKTTNKARSSNSWMLKYHKVAKKEQQSCGAKEMSNEKHKAQDLSDTGLNGRKTTRIGRLIAKQKL

Homology

The following BLAST results are available for this feature:

BLAST of CmaCh01G013170 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh01G013170 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh01G013170 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh01G013170 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..92
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..97

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh01G013170.1	CmaCh01G013170.1	mRNA