CmaCh01G013170 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh01G013170
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr01: 9398013 .. 9401902 (-)
RNA-Seq ExpressionCmaCh01G013170
SyntenyCmaCh01G013170
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCGAACCTCTGAACAAGGTATTCTTCGCCAGGTCTTAACCATTCCCTACAAAACCAAGCACAAAACATTCAATAAAATGTCATTTACATTTGGCTCTTAAAATCATTAAGAACTTTTATCTTCATCTTTCACGATCTCCCCCTATTCATCCTCTTTTTGCATTTTTATCTATATCTACGACCACTTTTTTTCTAGCTCCCAATACATTTTCTCTTTTAACTTCTTTACCCTTCTCCCATTAGTATCGTGCCAAATACTAAGCTACTTAAGACATACTCTCGATCAAGAAGTTAGACAATCGAATCTTACTTAGAATTCTTATTTCCATCATAGATTTTTACTTGTAATCGTTTAAACCGAACCCTTGTTCTTAAAGTTGGTGAAATTACTAATCACAAGGCAAGAGAAGAATCAAGGAAGATCCTTTTACTTGTTTGTATATGTATTTAAAGCCATACAACTATTATCGTGAGTACTGGTTCTTTTGGCTTGAGTTGAATACATTTATCTACTTTATTTTGTCAAGGTTAAGCCTTCTATGATTTGATTTTGAATGCTTGGTTAGTACAATTTCAGGTGATTCCAGAACAAATCTTTAGCTCTAAATAGGTACTGATTTCACTAAGTATCCAAATCTAGATTAATTAATCCCTTAAACAGGTTATATGTATAGAGACAAAAAAGTTCTGTGAACAATAGATATTTAATTTTTCATTGTGAAGGGGAGAGCGCAAAAATAACACTAAGTCAAAGCACTTACTCCACAGAATGATCAGCAAACTCAAAACGACCAACAAGGCCAGGTCCTCCAACTCTTGGATGCTGAAATATCATAAGGTTGCAAAGGTAAATGTCAATCAGATAAATTAGATTGTTCAAAGTGAGTGAATGCAGAAAGAGCAGCAAAGCTGTGGTGCCAAGGTTAATGGGATAGGAAGGAAGCAATAATCATGTGCTATCTAACCTGTGGTGCCAAGGTTAAGAACTTGTACGTATCCAAAGCATATCGTACCAAAGCTTCATTCTCACCGGGGTTTATCGTACAGCTGGCAGTGTAAAAGTATTACACAAAAACTTCAGTTGAATATACTGACAACAAAATTCAGAATAATTTGATCTAAAAAAAATAAAAAATAAAAAAGTAAACTAGAAGCAGAAAATTTTGGGGTGTGAGCAAAGCCTCGCGAGGAGTATTAGTGGGGTGGATCACAGTATAACGTAATGGGAAGGACCAAACAACCCGTTTATTAAAACAGTTGCCACAAAATTACAAGAGCTCCTGAGTTGATAGCATAATTTAGGGGGAAAATGGATAGCGAGTTTGGCCCAAGTAAAAACATTGAAACGATTAATTTCCCGAACCTCCTCTACGTCGTTATTCCTATCTTAGAAGATCCTATCATCCCTTCCCATTTATTAACTAATAAAATATAGCCATGACTGCGAGATCTCAAAGAATGTTCTTTGAAGGGTGGCAACTATTTTAGTTCAAAAGCAGACGTTCTATCCAAATTGCATTAACTTGTGGCACACAACAAACAAGAAAAAGTATAGTGCTGCATACTCACGTTGAATATACAATGACTCCACCCGGCCGGACTAATTGGACAGCCTGATCAAACATGCGCCTCTGATACTTTGCATGGTGCTTCAACGACGCAAGGGTTTCCTGGCAAAGACAATATATCAATCTCAAGTTTCCAATCATCGAGGCTTTAGTGAATGAATTACACACCAGCATAATTTTGAAAAGAAATTAGATGGTACAAAGCCATTTCTCAACCAAACATTACAGATACACACATAAACATGCATTCAGTTAATCATTGAAGTGATTCTACCTCCCCAGCAAATAGTCGAGGTCTTAAACCGAGGGCCGAGCAAGGAGCGTCAAGAAGGACTCTGTCAAAGCTGTTGGGAGCAAAACCTTTCGAGTTTTCAGCTCTACCGCCCATGCATTGATTTCTTCCTGGACCATTTCGTGGTCTCTTACCATTGTTCCTCCCTTCAGCTTCATTAACAAAAGTTCTCTCATTCAGTTTTCCCACAGTCGATTAAAAAAAATATGAAACTGAATTTGCAATCACAGATAGAGAAACACACATATGATGCAGTCAAAGAGGTGAAACTAGAAAGAACAGAACTTTGGAAAATAACAGTTGTACAGATCTCAATCCAAGCTTGCTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTAAGAAACCGTGTTTTCATTGTGACAATTAAAAGAATATTGGGACACAAAAAAAACAAGCCCAAACAAATGTGTAACGAAACTAATTATAGGTCTTCAAGCTAAAGAACAAGACCAAGCTCATTATTACAATGTATATATATATATATATATTAAATCCTAGTCACCAAAGCCCAAAGGGAAGCATTCTTCAGAGNTCAATGTAAGTAATTTTTACGAAGGAAAAGTATAAAAAAGAGTCCAAAAAATAATATTCCTATACCCCAAAAAAAAAAAAAGAATCAAACTACACATTTCCAAACTTGGATAGTCAAGGACTTTCCAAAAGCAATCCTGATGTCAAAGTCTACCTATTTCATTCCACACTTAGAATATAGAATAAGCACGTGTGGAAGATGAATGCTGCATTTTATTCCTTGGATCCCAAGTTCAAACTCCTAGATCTGTAAGAAACTATTCCACAAGGCAGGATTCTATATGTATATATACATAAAACTATAAGTTTTTTAATATGAAACATTGACCAAAAGGGATGGGGAGGAAAGCTAAGAAACTATTAGCCCAGTAGTTTCTAAAAGTTATAAGAATAAAGATAACCTACCATTTTGCTTCCTAATCTTATCAACTTCCAATATTTCGGTAATTGAGGATGGTTTTTCATTGTCAAGATTCATTGAACTGGAACTATCATTCACAACACTGTCGTTGGCATCAACACAAACTGAATCAGAGCTTTTGCAGGAATCAGTCCTTCGATTGACAGATTTCAGAGCATCAAGCTTATAGGTTTTTATACAGCTCAACCCCATTTCAGCAGCCAGTTTCTGAATATTCATCACCTGAACGTGGGTTTGAGAAAGGTTAACAAAGCAAGCAGACCATTGAACTTAATCTACACTTTGGAAGAATAGTTTGCACAGTTTAAATCCAGGATATGAGAAACAGAACGGAATAATTGAAAACATCTTTGTCATATCTCCAAGTTCATAATTCTACCTTATTATGGGACCTATCAGCAGCAATGATCTCCCCTTCATCCTTCATAAGGATGGCAATTGCAGTTGTTTTTCCCCCAGGTGCCGCACACATGTCTAATATGCGTTCACCTTTTTGTGGATCTAAGGTGAAAAATCCAAAAAAGATATCCATTAGGAGGAAATCAAACCATCCATAGTTAGCAAAAGGAAAAACCAAAACAAAACAATGATCAATGTGAACAAAATAAATAGACATAATGGTGACAGTGAGAAAATGACGAGCTGGGAAAATTATATTAATTGTTAAAAAATCCTCATTATAAGTTTTAATCTGCTCAATTGATTTTAACCTCAAAATCGAGTGTCCTTCATGCAAGTACAGGAGATGAGCAATGAGAAACACAAAGCTCAAGACTTGTCTGATACTGGACTGAATGGAAGGAAGACCACCCGGATAGGAAGGTTGATAGCAAAACAGAAACTTTAA

mRNA sequence

ATGGATCGAACCTCTGAACAAGGTATTCTTCGCCAGGTCTTAACCATTCCCTACAAAACCAAGCACAAAACATTCAATAAAATGGGAGAGCGCAAAAATAACACTAAGTCAAAGCACTTACTCCACAGAATGATCAGCAAACTCAAAACGACCAACAAGGCCAGGTCCTCCAACTCTTGGATGCTGAAATATCATAAGGTTGCAAAGAAAGAGCAGCAAAGCTGTGGTGCCAAGGAGATGAGCAATGAGAAACACAAAGCTCAAGACTTGTCTGATACTGGACTGAATGGAAGGAAGACCACCCGGATAGGAAGGTTGATAGCAAAACAGAAACTTTAA

Coding sequence (CDS)

ATGGATCGAACCTCTGAACAAGGTATTCTTCGCCAGGTCTTAACCATTCCCTACAAAACCAAGCACAAAACATTCAATAAAATGGGAGAGCGCAAAAATAACACTAAGTCAAAGCACTTACTCCACAGAATGATCAGCAAACTCAAAACGACCAACAAGGCCAGGTCCTCCAACTCTTGGATGCTGAAATATCATAAGGTTGCAAAGAAAGAGCAGCAAAGCTGTGGTGCCAAGGAGATGAGCAATGAGAAACACAAAGCTCAAGACTTGTCTGATACTGGACTGAATGGAAGGAAGACCACCCGGATAGGAAGGTTGATAGCAAAACAGAAACTTTAA

Protein sequence

MDRTSEQGILRQVLTIPYKTKHKTFNKMGERKNNTKSKHLLHRMISKLKTTNKARSSNSWMLKYHKVAKKEQQSCGAKEMSNEKHKAQDLSDTGLNGRKTTRIGRLIAKQKL
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 76..92
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 76..97

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh01G013170.1CmaCh01G013170.1mRNA