Clc08G01950 (gene) Watermelon (cordophanus) v2

InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Position :
0
Zoom :
x 1
ATGGCATCGGTTCTAATACAACCCCATTTGAACCAATTGGTTCTAGCGGCGCTTGAAAAATGCAGTCATCTCAATCACCTTAAGCAACTTCAAGGCTTTCTTATTTCTCTTGGTCACTCACAAACACAGTTCTTCGCCTTCAAGCTTGTTCGCTTCTGTAATCTTACTCTTGCTGACTTATGTTACGCTCGCTTCATTTTTGATAATCTAACTTCCCCAAATGTTTATCTCTATACTGCAATGATCACGGCTTATGCTTCACAGCCCGACCCTAAAGCCGCGTTTCTTTTGTATCGTAACATGGTCCGCCGTGGAGATCCTCGACCCAGCCATTTTATCTACCCCCATGTTCTAAAATCTTGCCCTGAGGTTCTGGAGTCCAACGGCACGAAAATGGTTCATACCCAGGTCCTGAAATCTGGATTTGCTGGATACCCAGTTGTCCAAACGGCCATTGTTGATTCCTATTCGAGGTTTTGTTCGGATATTGGGAATGCAAGACAGATGTTCGACGAAATGCTTGAGAGAAGTGTAGTGTCTTGGACAGCCATGATTTCGGGGTATGCAAAGCTTGGGAACGTTGAGAGTGCAATGGAGTTGTTTGAAAGTATGCCGGAGAGGGATGTCCCTGCTTGGAATGCTCTTATTGCTGGTTGTGCTCAAAATGGATTCTTCTGTGAATCAATTTGGTTGTTCAAAAGAATGGTCTCACTGGCGCTGGAGGGTAATAATAAGGAGCGTGAAAATAAGCCGAATAAGATCACAGTTGCATCTGCACTTTCAGCGTGTGGACATACTGGGATGCTTCATCTCGGTAAGTGGATTCATGGTTATGTTTTCAAAACTTATCTTGGTCAGGATTCATTTATCTCAAGTGCTTTGCTAGATATGTATGCGAAATGTGGCAATTTGAAAGTTGCGAGGAGAGTTTTTGACATGATTACTTTAAAAAGCTTGACATCATGGAATTCCTTGATAAATTGTCTTGCACTCCATGGCCACAGTGGAACTGCAATTGATTTGTTTGCAGAGTTGGTTCAATGTGGGGATGGCGTAAAGCCAGATGCGGTTACCTTTGTGGGTGTGTTGAATGCTTGTACTCATGGAGGATTAGTTGAAAAAGGTTACTCATACTTCGAAATGATGAGGCGGGATTACGACATCGAGCCTCAGATCGAACACTTTGGCTGCTTGATAGACCTTCTTGGCCGTGCAGGGCGGTTTGAGGAAGCAATGGAAGTTGTGAGAGGCATGAATATTGAACCAGATGAGGTTGTATGGGGTTCTTTACTAAATGGATGCAAAATCCATGGTCGTCCAGATTTAGCTGAATACTCAGTCAAAAAGTTGATCGAGATGGATCCAGAAAATGGCGGTTATAGAATTATGCTAGCAAATATATATGCCGAGCTCAAAAAGTGGGATGAGGTTCGCAAGGTTCGAAAACTTTTGAAGGAGCAAAATGCTTATAAAACACCAGGCTGCAGTTGGATTGAGGTTGATAATCAGGTTTATCAGTTCTATTCTTTTGACATGACACATCCCAGTGCAGAACAAATATACAAAACCTTAGAAAGCGAGAAAGTCGAACCACGAGAGGATTGTCATGCTCTTCCAAGCCCTTCTCTCCTTCCAATGGCAGTCTTCTTTAAGTATAGTTCAACTGCTGCTGATGATAAAATGGCCAACAGAGAAGTTTCTTTGGAGATGAGATATGTGAACAAATCAAGGACTGTGTGCTGTTTGTATGAAGTTCAAAGATATGTGAATGTTGTAGTTATGTGTACCAAGTTGCTCAAGGACATCTATTAG20040060080010001200140016001800Expect = 8.0E-8 / Score = 33.8Expect = 1.2E-23 / Score = 86.1Expect = 1.2E-40 / Score = 141.8Score = Expect = 3.3E-8 / Score = 31.2Expect = 0.0013 / Score = 16.8Expect = 0.0017 / Score = 16.4Expect = 0.059 / Score = 13.7Expect = 1.6E-9 / Score = 37.3Expect = 6.8E-4 / Score = 19.7Expect = 0.45 / Score = 10.9Expect = 6.7E-4 / Score = 19.7Expect = 0.048 / Score = 13.9Score = 12.232868Score = 8.966401Score = Score = SequenceG3DSA:1.25.40.10G3DSA:1.25.40.10G3DSA:1.25.40.10SSF48452TIGR00756PF01535PS51375PS51375PTHR47924:SF11PTHR47924
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 5..154
e-value: 8.0E-8
score: 33.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 155..284
e-value: 1.2E-23
score: 86.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 293..533
e-value: 1.2E-40
score: 141.8
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 69..480
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 395..418
e-value: 7.3E-4
score: 17.5
coord: 179..209
e-value: 3.3E-8
score: 31.2
coord: 321..349
e-value: 0.0013
score: 16.8
coord: 357..390
e-value: 0.0017
score: 16.4
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 321..349
e-value: 6.7E-4
score: 19.7
coord: 179..208
e-value: 1.6E-9
score: 37.3
coord: 395..418
e-value: 0.0084
score: 16.3
coord: 211..237
e-value: 6.8E-4
score: 19.7
coord: 357..385
e-value: 0.048
score: 13.9
coord: 77..105
e-value: 0.059
score: 13.7
coord: 292..314
e-value: 0.45
score: 10.9
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 177..211
score: 12.232868
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 74..108
score: 8.966401
NoneNo IPR availablePANTHERPTHR47924:SF11SUBFAMILY NOT NAMEDcoord: 2..526
NoneNo IPR availablePANTHERPTHR47924PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 2..526