Clc08G01950.2 (mRNA) Watermelon (cordophanus) v2

Overview


Name	Clc08G01950.2
Type	mRNA
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Pentatricopeptide repeat-containing protein
Location	ClcChr08: 3724695 .. 3726825 (-)
Sequence length	1812
RNA-Seq Expression	Clc08G01950.2
Synteny	Clc08G01950.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATCGGTTCTAATACAACCCCATTTGAACCAATTGGTTCTAGCGGCGCTTGAAAAATGCAGTCATCTCAATCACCTTAAGCAACTTCAAGGCTTTCTTATTTCTCTTGGTCACTCACAAACACAGTTCTTCGCCTTCAAGCTTGTTCGCTTCTGTAATCTTACTCTTGCTGACTTATGTTACGCTCGCTTCATTTTTGATAATCTAACTTCCCCAAATGTTTATCTCTATACTGCAATGATCACGGCTTATGCTTCACAGCCCGACCCTAAAGCCGCGTTTCTTTTGTATCGTAACATGGTCCGCCGTGGAGATCCTCGACCCAGCCATTTTATCTACCCCCATGTTCTAAAATCTTGCCCTGAGGTTCTGGAGTCCAACGGCACGAAAATGGTTCATACCCAGGTCCTGAAATCTGGATTTGCTGGATACCCAGTTGTCCAAACGGCCATTGTTGATTCCTATTCGAGGTTTTGTTCGGATATTGGGAATGCAAGACAGATGTTCGACGAAATGCTTGAGAGAAGTGTAGTGTCTTGGACAGCCATGATTTCGGGGTATGCAAAGCTTGGGAACGTTGAGAGTGCAATGGAGTTGTTTGAAAGTATGCCGGAGAGGGATGTCCCTGCTTGGAATGCTCTTATTGCTGGTTGTGCTCAAAATGGATTCTTCTGTGAATCAATTTGGTTGTTCAAAAGAATGGTCTCACTGGCGCTGGAGGGTAATAATAAGGAGCGTGAAAATAAGCCGAATAAGATCACAGTTGCATCTGCACTTTCAGCGTGTGGACATACTGGGATGCTTCATCTCGGTAAGTGGATTCATGGTTATGTTTTCAAAACTTATCTTGGTCAGGATTCATTTATCTCAAGTGCTTTGCTAGATATGTATGCGAAATGTGGCAATTTGAAAGTTGCGAGGAGAGTTTTTGACATGATTACTTTAAAAAGCTTGACATCATGGAATTCCTTGATAAATTGTCTTGCACTCCATGGCCACAGTGGAACTGCAATTGATTTGTTTGCAGAGTTGGTTCAATGTGGGGATGGCGTAAAGCCAGATGCGGTTACCTTTGTGGGTGTGTTGAATGCTTGTACTCATGGAGGATTAGTTGAAAAAGGTTACTCATACTTCGAAATGATGAGGCGGGATTACGACATCGAGCCTCAGATCGAACACTTTGGCTGCTTGATAGACCTTCTTGGCCGTGCAGGGCGGTTTGAGGAAGCAATGGAAGTTGTGAGAGGCATGAATATTGAACCAGATGAGGTTGTATGGGGTTCTTTACTAAATGGATGCAAAATCCATGGTCGTCCAGATTTAGCTGAATACTCAGTCAAAAAGTTGATCGAGATGGATCCAGAAAATGGCGGTTATAGAATTATGCTAGCAAATATATATGCCGAGCTCAAAAAGTGGGATGAGGTTCGCAAGGTTCGAAAACTTTTGAAGGAGCAAAATGCTTATAAAACACCAGGCTGCAGTTGGATTGAGGTTGATAATCAGGTTTATCAGTTCTATTCTTTTGACATGACACATCCCAGTGCAGAACAAATATACAAAACCTTAGAAAGTATGATCAGTTTTATGTAAAAAGCAAATAAAGATTTGACACCAGATTGGAGCATATTCTACATTCCGTGCTAATGCTCTCCATAGTCGTGATTTATAAGGCGAGAAAGTCGAACCACGAGAGGATTGTCATGCTCTTCCAAGCCCTTCTCTCCTTCCAATGGCAGTCTTCTTTAAGGTCAATTGAAAAAAAAAAAAAAAGAACTTCATGAAAGAAGTCTTCTCTATTCTAAGCTTGGTCTGAGCTATTGCTTCCAAGTACAGCACAATTGACAACAGGAGCCAAACAGAAGGACAGCAGGCTATTGAGTTATAGGCTTAGAGATCAATGCAAGCAACTTTGAATTAATTGTATCCCCTTTATATGCTTGTGTTAACCTTTACAAAACATTAGTAGTATAGTTCAACTGCTGCTGATGATAAAATGGCCAACAGAGAAGTTTCTTTGGAGATGAGATATGTGAACAAATCAAGGACTGTGTGCTGTTTGTATGAAGTTCAAAGATATGTGAATGTTGTAGTTATGTGTACCAAGTTGCTCAAGGACATCTATTAG

mRNA sequence

ATGGCATCGGTTCTAATACAACCCCATTTGAACCAATTGGTTCTAGCGGCGCTTGAAAAATGCAGTCATCTCAATCACCTTAAGCAACTTCAAGGCTTTCTTATTTCTCTTGGTCACTCACAAACACAGTTCTTCGCCTTCAAGCTTGTTCGCTTCTGTAATCTTACTCTTGCTGACTTATGTTACGCTCGCTTCATTTTTGATAATCTAACTTCCCCAAATGTTTATCTCTATACTGCAATGATCACGGCTTATGCTTCACAGCCCGACCCTAAAGCCGCGTTTCTTTTGTATCGTAACATGGTCCGCCGTGGAGATCCTCGACCCAGCCATTTTATCTACCCCCATGTTCTAAAATCTTGCCCTGAGGTTCTGGAGTCCAACGGCACGAAAATGGTTCATACCCAGGTCCTGAAATCTGGATTTGCTGGATACCCAGTTGTCCAAACGGCCATTGTTGATTCCTATTCGAGGTTTTGTTCGGATATTGGGAATGCAAGACAGATGTTCGACGAAATGCTTGAGAGAAGTGTAGTGTCTTGGACAGCCATGATTTCGGGGTATGCAAAGCTTGGGAACGTTGAGAGTGCAATGGAGTTGTTTGAAAGTATGCCGGAGAGGGATGTCCCTGCTTGGAATGCTCTTATTGCTGGTTGTGCTCAAAATGGATTCTTCTGTGAATCAATTTGGTTGTTCAAAAGAATGGTCTCACTGGCGCTGGAGGGTAATAATAAGGAGCGTGAAAATAAGCCGAATAAGATCACAGTTGCATCTGCACTTTCAGCGTGTGGACATACTGGGATGCTTCATCTCGGTAAGTGGATTCATGGTTATGTTTTCAAAACTTATCTTGGTCAGGATTCATTTATCTCAAGTGCTTTGCTAGATATGTATGCGAAATGTGGCAATTTGAAAGTTGCGAGGAGAGTTTTTGACATGATTACTTTAAAAAGCTTGACATCATGGAATTCCTTGATAAATTGTCTTGCACTCCATGGCCACAGTGGAACTGCAATTGATTTGTTTGCAGAGTTGGTTCAATGTGGGGATGGCGTAAAGCCAGATGCGGTTACCTTTGTGGGTGTGTTGAATGCTTGTACTCATGGAGGATTAGTTGAAAAAGGTTACTCATACTTCGAAATGATGAGGCGGGATTACGACATCGAGCCTCAGATCGAACACTTTGGCTGCTTGATAGACCTTCTTGGCCGTGCAGGGCGGTTTGAGGAAGCAATGGAAGTTGTGAGAGGCATGAATATTGAACCAGATGAGGTTGTATGGGGTTCTTTACTAAATGGATGCAAAATCCATGGTCGTCCAGATTTAGCTGAATACTCAGTCAAAAAGTTGATCGAGATGGATCCAGAAAATGGCGGTTATAGAATTATGCTAGCAAATATATATGCCGAGCTCAAAAAGTGGGATGAGGTTCGCAAGGTTCGAAAACTTTTGAAGGAGCAAAATGCTTATAAAACACCAGGCTGCAGTTGGATTGAGGTTGATAATCAGGTTTATCAGTTCTATTCTTTTGACATGACACATCCCAGTGCAGAACAAATATACAAAACCTTAGAAAGCGAGAAAGTCGAACCACGAGAGGATTGTCATGCTCTTCCAAGCCCTTCTCTCCTTCCAATGGCAGTCTTCTTTAAGTATAGTTCAACTGCTGCTGATGATAAAATGGCCAACAGAGAAGTTTCTTTGGAGATGAGATATGTGAACAAATCAAGGACTGTGTGCTGTTTGTATGAAGTTCAAAGATATGTGAATGTTGTAGTTATGTGTACCAAGTTGCTCAAGGACATCTATTAG

Coding sequence (CDS)

ATGGCATCGGTTCTAATACAACCCCATTTGAACCAATTGGTTCTAGCGGCGCTTGAAAAATGCAGTCATCTCAATCACCTTAAGCAACTTCAAGGCTTTCTTATTTCTCTTGGTCACTCACAAACACAGTTCTTCGCCTTCAAGCTTGTTCGCTTCTGTAATCTTACTCTTGCTGACTTATGTTACGCTCGCTTCATTTTTGATAATCTAACTTCCCCAAATGTTTATCTCTATACTGCAATGATCACGGCTTATGCTTCACAGCCCGACCCTAAAGCCGCGTTTCTTTTGTATCGTAACATGGTCCGCCGTGGAGATCCTCGACCCAGCCATTTTATCTACCCCCATGTTCTAAAATCTTGCCCTGAGGTTCTGGAGTCCAACGGCACGAAAATGGTTCATACCCAGGTCCTGAAATCTGGATTTGCTGGATACCCAGTTGTCCAAACGGCCATTGTTGATTCCTATTCGAGGTTTTGTTCGGATATTGGGAATGCAAGACAGATGTTCGACGAAATGCTTGAGAGAAGTGTAGTGTCTTGGACAGCCATGATTTCGGGGTATGCAAAGCTTGGGAACGTTGAGAGTGCAATGGAGTTGTTTGAAAGTATGCCGGAGAGGGATGTCCCTGCTTGGAATGCTCTTATTGCTGGTTGTGCTCAAAATGGATTCTTCTGTGAATCAATTTGGTTGTTCAAAAGAATGGTCTCACTGGCGCTGGAGGGTAATAATAAGGAGCGTGAAAATAAGCCGAATAAGATCACAGTTGCATCTGCACTTTCAGCGTGTGGACATACTGGGATGCTTCATCTCGGTAAGTGGATTCATGGTTATGTTTTCAAAACTTATCTTGGTCAGGATTCATTTATCTCAAGTGCTTTGCTAGATATGTATGCGAAATGTGGCAATTTGAAAGTTGCGAGGAGAGTTTTTGACATGATTACTTTAAAAAGCTTGACATCATGGAATTCCTTGATAAATTGTCTTGCACTCCATGGCCACAGTGGAACTGCAATTGATTTGTTTGCAGAGTTGGTTCAATGTGGGGATGGCGTAAAGCCAGATGCGGTTACCTTTGTGGGTGTGTTGAATGCTTGTACTCATGGAGGATTAGTTGAAAAAGGTTACTCATACTTCGAAATGATGAGGCGGGATTACGACATCGAGCCTCAGATCGAACACTTTGGCTGCTTGATAGACCTTCTTGGCCGTGCAGGGCGGTTTGAGGAAGCAATGGAAGTTGTGAGAGGCATGAATATTGAACCAGATGAGGTTGTATGGGGTTCTTTACTAAATGGATGCAAAATCCATGGTCGTCCAGATTTAGCTGAATACTCAGTCAAAAAGTTGATCGAGATGGATCCAGAAAATGGCGGTTATAGAATTATGCTAGCAAATATATATGCCGAGCTCAAAAAGTGGGATGAGGTTCGCAAGGTTCGAAAACTTTTGAAGGAGCAAAATGCTTATAAAACACCAGGCTGCAGTTGGATTGAGGTTGATAATCAGGTTTATCAGTTCTATTCTTTTGACATGACACATCCCAGTGCAGAACAAATATACAAAACCTTAGAAAGCGAGAAAGTCGAACCACGAGAGGATTGTCATGCTCTTCCAAGCCCTTCTCTCCTTCCAATGGCAGTCTTCTTTAAGTATAGTTCAACTGCTGCTGATGATAAAATGGCCAACAGAGAAGTTTCTTTGGAGATGAGATATGTGAACAAATCAAGGACTGTGTGCTGTTTGTATGAAGTTCAAAGATATGTGAATGTTGTAGTTATGTGTACCAAGTTGCTCAAGGACATCTATTAG

Protein sequence

MASVLIQPHLNQLVLAALEKCSHLNHLKQLQGFLISLGHSQTQFFAFKLVRFCNLTLADLCYARFIFDNLTSPNVYLYTAMITAYASQPDPKAAFLLYRNMVRRGDPRPSHFIYPHVLKSCPEVLESNGTKMVHTQVLKSGFAGYPVVQTAIVDSYSRFCSDIGNARQMFDEMLERSVVSWTAMISGYAKLGNVESAMELFESMPERDVPAWNALIAGCAQNGFFCESIWLFKRMVSLALEGNNKERENKPNKITVASALSACGHTGMLHLGKWIHGYVFKTYLGQDSFISSALLDMYAKCGNLKVARRVFDMITLKSLTSWNSLINCLALHGHSGTAIDLFAELVQCGDGVKPDAVTFVGVLNACTHGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNGCKIHGRPDLAEYSVKKLIEMDPENGGYRIMLANIYAELKKWDEVRKVRKLLKEQNAYKTPGCSWIEVDNQVYQFYSFDMTHPSAEQIYKTLESEKVEPREDCHALPSPSLLPMAVFFKYSSTAADDKMANREVSLEMRYVNKSRTVCCLYEVQRYVNVVVMCTKLLKDIY

Homology

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BLAST of Clc08G01950.2 vs. NCBI nr
Match: XP_038889416.1 (pentatricopeptide repeat-containing protein At1g33350-like [Benincasa hispida])

HSP 1 Score: 1041.2 bits (2691), Expect = 3.5e-300
Identity = 500/526 (95.06%), Postives = 514/526 (97.72%), Query Frame = 0


Query: 1   MASVLIQPHLNQLVLAALEKCSHLNHLKQLQGFLISLGHSQTQFFAFKLVRFCNLTLADL 60
           M+SV IQPHLNQLVLAALEKCS LNHLKQLQGFLISLGHS+TQFFAFKLVRFCNLTLADL
Sbjct: 1   MSSVPIQPHLNQLVLAALEKCSQLNHLKQLQGFLISLGHSRTQFFAFKLVRFCNLTLADL 60

Query: 61  CYARFIFDNLTSPNVYLYTAMITAYASQPDPKAAFLLYRNMVRRGDPRPSHFIYPHVLKS 120
           CYARFIFD+LTSPNVYLYTAMITAYASQPDPKAAFLLYRNMVR G PRP+HFIYPHVLKS
Sbjct: 61  CYARFIFDHLTSPNVYLYTAMITAYASQPDPKAAFLLYRNMVRHGAPRPNHFIYPHVLKS 120

Query: 121 CPEVLESNGTKMVHTQVLKSGFAGYPVVQTAIVDSYSRFCSDIGNARQMFDEMLERSVVS 180
           CPEVLESNGTKMVHTQVLKSGF  YPVVQTAIVDSYSRFCSD+GNARQMFDEMLERSVVS
Sbjct: 121 CPEVLESNGTKMVHTQVLKSGFGQYPVVQTAIVDSYSRFCSDLGNARQMFDEMLERSVVS 180

Query: 181 WTAMISGYAKLGNVESAMELFESMPERDVPAWNALIAGCAQNGFFCESIWLFKRMVSLAL 240
           WTAMISGYA+LGNV+SA+ELFESMPERDVPAWNALIAGCAQNGFFCE+IWLFKRMVSLAL
Sbjct: 181 WTAMISGYARLGNVDSAIELFESMPERDVPAWNALIAGCAQNGFFCEAIWLFKRMVSLAL 240

Query: 241 EGNNKERENKPNKITVASALSACGHTGMLHLGKWIHGYVFKTYLGQDSFISSALLDMYAK 300
           EGNN ERENKPNKITVASALSACGHTGMLHLGKWIHGYVFK Y GQDSFIS+ALLDMY K
Sbjct: 241 EGNNNERENKPNKITVASALSACGHTGMLHLGKWIHGYVFKNYFGQDSFISNALLDMYGK 300

Query: 301 CGNLKVARRVFDMITLKSLTSWNSLINCLALHGHSGTAIDLFAELVQCGDGVKPDAVTFV 360
           CGNLKVARRVFDMI+LKSLTSWNSLINCLALHGHSG+AIDLF ELVQCGDGVKPD VTFV
Sbjct: 301 CGNLKVARRVFDMISLKSLTSWNSLINCLALHGHSGSAIDLFVELVQCGDGVKPDGVTFV 360

Query: 361 GVLNACTHGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNI 420
           GVLNACTHGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNI
Sbjct: 361 GVLNACTHGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNI 420

Query: 421 EPDEVVWGSLLNGCKIHGRPDLAEYSVKKLIEMDPENGGYRIMLANIYAELKKWDEVRKV 480
           EPDEVVWGSLLNGCKIHGRPDLAEYSVKKLIEMDPENGGYRIMLANIYAEL+KWDEVRKV
Sbjct: 421 EPDEVVWGSLLNGCKIHGRPDLAEYSVKKLIEMDPENGGYRIMLANIYAELEKWDEVRKV 480

Query: 481 RKLLKEQNAYKTPGCSWIEVDNQVYQFYSFDMTHPSAEQIYKTLES 527
           RKLLKEQNAYKTPGCSWIEVDNQ+YQFYSFDMTHPSAEQIYKTLES
Sbjct: 481 RKLLKEQNAYKTPGCSWIEVDNQIYQFYSFDMTHPSAEQIYKTLES 526

[Close]

BLAST of Clc08G01950.2 vs. NCBI nr
Match: XP_008459497.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g33350 [Cucumis melo])

HSP 1 Score: 997.3 bits (2577), Expect = 5.8e-287
Identity = 482/526 (91.63%), Postives = 502/526 (95.44%), Query Frame = 0


Query: 1   MASVLIQPHLNQLVLAALEKCSHLNHLKQLQGFLISLGHSQTQFFAFKLVRFCNLTLADL 60
           M+SV IQPHL QLV+AALEKCS+LNHLKQLQGFLIS GHSQTQFFAFKLVRFCNLTL DL
Sbjct: 26  MSSVSIQPHLYQLVVAALEKCSNLNHLKQLQGFLISHGHSQTQFFAFKLVRFCNLTLTDL 85

Query: 61  CYARFIFDNLTSPNVYLYTAMITAYASQPDPKAAFLLYRNMVRRGDPRPSHFIYPHVLKS 120
           CYAR+IFDNLTSPNVYLYTAMITAYA+ PDPKAAFLLYRNMVR G  RP+HFIYPHVLKS
Sbjct: 86  CYARYIFDNLTSPNVYLYTAMITAYAAYPDPKAAFLLYRNMVRHGAIRPNHFIYPHVLKS 145

Query: 121 CPEVLESNGTKMVHTQVLKSGFAGYPVVQTAIVDSYSRFCSDIGNARQMFDEMLERSVVS 180
           CP+VL SN TKMVHTQVLKSGF  YPVVQTAIVDSYSRF S IGNARQMFDEM+ERSVVS
Sbjct: 146 CPDVLGSNATKMVHTQVLKSGFGRYPVVQTAIVDSYSRFSSVIGNARQMFDEMVERSVVS 205

Query: 181 WTAMISGYAKLGNVESAMELFESMPERDVPAWNALIAGCAQNGFFCESIWLFKRMVSLAL 240
           WTAMISGYA+LGN +SA+ELFESMPERDVPAWNALIAGCAQNGFFCE+IWLFK+MVSLAL
Sbjct: 206 WTAMISGYARLGNFDSAIELFESMPERDVPAWNALIAGCAQNGFFCEAIWLFKKMVSLAL 265

Query: 241 EGNNKERENKPNKITVASALSACGHTGMLHLGKWIHGYVFKTYLGQDSFISSALLDMYAK 300
           EGNN +RENKPNK T+ASALSACG+TGMLHLGKWIHGYVFKTY GQDSFIS+ALLDMY K
Sbjct: 266 EGNNNDRENKPNKTTLASALSACGNTGMLHLGKWIHGYVFKTYPGQDSFISNALLDMYGK 325

Query: 301 CGNLKVARRVFDMITLKSLTSWNSLINCLALHGHSGTAIDLFAELVQCGDGVKPDAVTFV 360
           CGNLKVARRVFDMITLKSLTSWNSLINCLALHGHSG+AIDLFAELVQCGDGVKPD VTFV
Sbjct: 326 CGNLKVARRVFDMITLKSLTSWNSLINCLALHGHSGSAIDLFAELVQCGDGVKPDEVTFV 385

Query: 361 GVLNACTHGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNI 420
           GVLNACTHGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNI
Sbjct: 386 GVLNACTHGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNI 445

Query: 421 EPDEVVWGSLLNGCKIHGRPDLAEYSVKKLIEMDPENGGYRIMLANIYAELKKWDEVRKV 480
           EPDEVVWGSLLN CKIHGR DLAEYSVKKLIEMDP+NGGYRIMLANIYAEL KWDEVRKV
Sbjct: 446 EPDEVVWGSLLNACKIHGRSDLAEYSVKKLIEMDPKNGGYRIMLANIYAELGKWDEVRKV 505

Query: 481 RKLLKEQNAYKTPGCSWIEVDNQVYQFYSFDMTHPSAEQIYKTLES 527
           RKLLKE+NAYKTPGCSWIEVDNQVYQFYSFDMTHPS EQIYKTLES
Sbjct: 506 RKLLKEKNAYKTPGCSWIEVDNQVYQFYSFDMTHPSVEQIYKTLES 551

[Close]

BLAST of Clc08G01950.2 vs. NCBI nr
Match: XP_004141609.3 (pentatricopeptide repeat-containing protein At1g33350 [Cucumis sativus])

HSP 1 Score: 989.6 bits (2557), Expect = 1.2e-284
Identity = 474/526 (90.11%), Postives = 501/526 (95.25%), Query Frame = 0


Query: 1   MASVLIQPHLNQLVLAALEKCSHLNHLKQLQGFLISLGHSQTQFFAFKLVRFCNLTLADL 60
           M+SV I PHLNQL +AALEKCS+LNHLKQLQGFLIS GHSQTQFFAFKLVRFCNLTLADL
Sbjct: 33  MSSVSIHPHLNQLFVAALEKCSNLNHLKQLQGFLISHGHSQTQFFAFKLVRFCNLTLADL 92

Query: 61  CYARFIFDNLTSPNVYLYTAMITAYASQPDPKAAFLLYRNMVRRGDPRPSHFIYPHVLKS 120
           CYAR+IFDNLTSPNV+LYTAMITAYAS PDPKAAFLLYRNMVRRG  RP++FIYPHVL+S
Sbjct: 93  CYARYIFDNLTSPNVFLYTAMITAYASYPDPKAAFLLYRNMVRRGAIRPNNFIYPHVLRS 152

Query: 121 CPEVLESNGTKMVHTQVLKSGFAGYPVVQTAIVDSYSRFCSDIGNARQMFDEMLERSVVS 180
           CP+VL SN TKMVHTQVLKSGF GYPVVQTAIVDSYSRF SDIG+ARQMFDEMLER+VVS
Sbjct: 153 CPDVLGSNATKMVHTQVLKSGFGGYPVVQTAIVDSYSRFSSDIGSARQMFDEMLERTVVS 212

Query: 181 WTAMISGYAKLGNVESAMELFESMPERDVPAWNALIAGCAQNGFFCESIWLFKRMVSLAL 240
           WTAMISGYA+LGN +SA+ELFESMPERDVPAWNALIAGCAQNGFFCE+IWLFKRMV LAL
Sbjct: 213 WTAMISGYARLGNFDSAIELFESMPERDVPAWNALIAGCAQNGFFCEAIWLFKRMVLLAL 272

Query: 241 EGNNKERENKPNKITVASALSACGHTGMLHLGKWIHGYVFKTYLGQDSFISSALLDMYAK 300
           EGNN +RENKPNK T+ SALSACGHTGMLHLGKWIHGYVFKTY GQDSFIS+ALLDMY K
Sbjct: 273 EGNNNDRENKPNKTTLGSALSACGHTGMLHLGKWIHGYVFKTYPGQDSFISNALLDMYGK 332

Query: 301 CGNLKVARRVFDMITLKSLTSWNSLINCLALHGHSGTAIDLFAELVQCGDGVKPDAVTFV 360
           CGNLKVARRVFDMITLK+LTSWNSLINCLALHGHSG+AIDLFAEL+ CGDGVKP+ VTFV
Sbjct: 333 CGNLKVARRVFDMITLKNLTSWNSLINCLALHGHSGSAIDLFAELIHCGDGVKPNEVTFV 392

Query: 361 GVLNACTHGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNI 420
           GVLNACTHGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNI
Sbjct: 393 GVLNACTHGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNI 452

Query: 421 EPDEVVWGSLLNGCKIHGRPDLAEYSVKKLIEMDPENGGYRIMLANIYAELKKWDEVRKV 480
           EPDEVVWGSLLN CKIHGR DLAEYSVKKLIEMDP+NGGYRIMLANIYAE  KWDEVRKV
Sbjct: 453 EPDEVVWGSLLNACKIHGRSDLAEYSVKKLIEMDPKNGGYRIMLANIYAEFGKWDEVRKV 512

Query: 481 RKLLKEQNAYKTPGCSWIEVDNQVYQFYSFDMTHPSAEQIYKTLES 527
           R+LLKE+NAYKTPGCSWIEVDNQVYQFYSFDM+HPS E+IYKTLES
Sbjct: 513 RRLLKEKNAYKTPGCSWIEVDNQVYQFYSFDMSHPSVEEIYKTLES 558

[Close]

BLAST of Clc08G01950.2 vs. NCBI nr
Match: XP_022974048.1 (pentatricopeptide repeat-containing protein At1g33350 [Cucurbita maxima])

HSP 1 Score: 989.6 bits (2557), Expect = 1.2e-284
Identity = 477/526 (90.68%), Postives = 505/526 (96.01%), Query Frame = 0


Query: 1   MASVLIQPHLNQLVLAALEKCSHLNHLKQLQGFLISLGHSQTQFFAFKLVRFCNLTLADL 60
           MASV +QPHLNQLVL+ LEKCSHLNHLKQLQGFLISLGHSQTQF+AFKLVRFCNLTL DL
Sbjct: 1   MASVPMQPHLNQLVLSVLEKCSHLNHLKQLQGFLISLGHSQTQFYAFKLVRFCNLTLTDL 60

Query: 61  CYARFIFDNLTSPNVYLYTAMITAYASQPDPKAAFLLYRNMVRRGDPRPSHFIYPHVLKS 120
           CY+RFIFD+L+SPNVYLYTAMITAYAS+PD KAAFLLYRNMVRRG P P+HFIYPHVLKS
Sbjct: 61  CYSRFIFDHLSSPNVYLYTAMITAYASEPDSKAAFLLYRNMVRRGAPLPNHFIYPHVLKS 120

Query: 121 CPEVLESNGTKMVHTQVLKSGFAGYPVVQTAIVDSYSRFCSDIGNARQMFDEMLERSVVS 180
           CPE+LESNGTKMVH QVLKSGF GYPVVQTAIVD+YSRF +DIG ARQ+FDEMLERSVVS
Sbjct: 121 CPELLESNGTKMVHAQVLKSGFGGYPVVQTAIVDAYSRFRTDIGIARQVFDEMLERSVVS 180

Query: 181 WTAMISGYAKLGNVESAMELFESMPERDVPAWNALIAGCAQNGFFCESIWLFKRMVSLAL 240
           WTAMISGYA+LG++++AM LFESMPERD+PAWNALIAGCAQNGFFCE+I LFKRMVSLAL
Sbjct: 181 WTAMISGYARLGDIDNAMALFESMPERDIPAWNALIAGCAQNGFFCEAIGLFKRMVSLAL 240

Query: 241 EGNNKERENKPNKITVASALSACGHTGMLHLGKWIHGYVFKTYLGQDSFISSALLDMYAK 300
           EG NKERE KPNKITVASALS+CGHTGMLHLGKWIHGYVFKTYLGQDSFIS+ALLDMY K
Sbjct: 241 EG-NKERETKPNKITVASALSSCGHTGMLHLGKWIHGYVFKTYLGQDSFISNALLDMYGK 300

Query: 301 CGNLKVARRVFDMITLKSLTSWNSLINCLALHGHSGTAIDLFAELVQCGDGVKPDAVTFV 360
           CGNLKVARRVFDMITLKSLTSWNSLINCLALHGHSG+AIDLF ELVQC DGV+PDAVTFV
Sbjct: 301 CGNLKVARRVFDMITLKSLTSWNSLINCLALHGHSGSAIDLFLELVQCRDGVQPDAVTFV 360

Query: 361 GVLNACTHGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNI 420
           GVLNACTHGGLVEKGYSYF+MMR+DYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNI
Sbjct: 361 GVLNACTHGGLVEKGYSYFKMMRQDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNI 420

Query: 421 EPDEVVWGSLLNGCKIHGRPDLAEYSVKKLIEMDPENGGYRIMLANIYAELKKWDEVRKV 480
           EPDEVVWGSLLNGCKIHGR DLAEYSVKKLIEMDPENGGYRIMLANIYAEL+ WDEVRKV
Sbjct: 421 EPDEVVWGSLLNGCKIHGRLDLAEYSVKKLIEMDPENGGYRIMLANIYAELENWDEVRKV 480

Query: 481 RKLLKEQNAYKTPGCSWIEVDNQVYQFYSFDMTHPSAEQIYKTLES 527
           RKLLKEQNAYK PGCSWIEVDN VYQFYSFDM+HP+AEQIYKTLES
Sbjct: 481 RKLLKEQNAYKIPGCSWIEVDNHVYQFYSFDMSHPNAEQIYKTLES 525

[Close]

BLAST of Clc08G01950.2 vs. NCBI nr
Match: XP_022930176.1 (pentatricopeptide repeat-containing protein At1g33350 [Cucurbita moschata])

HSP 1 Score: 987.6 bits (2552), Expect = 4.6e-284
Identity = 475/526 (90.30%), Postives = 505/526 (96.01%), Query Frame = 0


Query: 1   MASVLIQPHLNQLVLAALEKCSHLNHLKQLQGFLISLGHSQTQFFAFKLVRFCNLTLADL 60
           MAS+ IQPHLNQLVL+ LEKCSHLNHLKQLQGFLISLG SQTQF+AFKLVRFCNLTL DL
Sbjct: 1   MASLPIQPHLNQLVLSVLEKCSHLNHLKQLQGFLISLGQSQTQFYAFKLVRFCNLTLTDL 60

Query: 61  CYARFIFDNLTSPNVYLYTAMITAYASQPDPKAAFLLYRNMVRRGDPRPSHFIYPHVLKS 120
           CY+RFIFD+L+SPNVYLYTAMITAYAS+ D KAAFLLYRNMVRRGDP P+HFIYPHVLKS
Sbjct: 61  CYSRFIFDHLSSPNVYLYTAMITAYASELDSKAAFLLYRNMVRRGDPLPNHFIYPHVLKS 120

Query: 121 CPEVLESNGTKMVHTQVLKSGFAGYPVVQTAIVDSYSRFCSDIGNARQMFDEMLERSVVS 180
           CPE+LESNGTKMVH QVLKSGF GYPVVQTAIVD+YSRF ++IG ARQ+FDEMLERSVVS
Sbjct: 121 CPELLESNGTKMVHAQVLKSGFGGYPVVQTAIVDAYSRFRTEIGIARQVFDEMLERSVVS 180

Query: 181 WTAMISGYAKLGNVESAMELFESMPERDVPAWNALIAGCAQNGFFCESIWLFKRMVSLAL 240
           WTAM+SGYA+LG++++AM LFESMPERD+PAWNALIAGCAQNGFFCE+I LFKRMVSLAL
Sbjct: 181 WTAMVSGYARLGDIDNAMALFESMPERDIPAWNALIAGCAQNGFFCEAIGLFKRMVSLAL 240

Query: 241 EGNNKERENKPNKITVASALSACGHTGMLHLGKWIHGYVFKTYLGQDSFISSALLDMYAK 300
           EG NKERE KPNKITVASALSACGHTGMLHLGKWIHGYVFKTYLGQDSFIS+ALLDMY K
Sbjct: 241 EG-NKERETKPNKITVASALSACGHTGMLHLGKWIHGYVFKTYLGQDSFISNALLDMYGK 300

Query: 301 CGNLKVARRVFDMITLKSLTSWNSLINCLALHGHSGTAIDLFAELVQCGDGVKPDAVTFV 360
           CGNLKVARRVFDMITLKSLTSWNSLINCLALHGHSG+AIDLF ELVQCGDGVKPD VTFV
Sbjct: 301 CGNLKVARRVFDMITLKSLTSWNSLINCLALHGHSGSAIDLFLELVQCGDGVKPDGVTFV 360

Query: 361 GVLNACTHGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNI 420
           GVLNACTHGGLVEKGYSYF+MMR+DYDIEPQIEHFGCLIDLLGRAGRFEEAMEVV+GMNI
Sbjct: 361 GVLNACTHGGLVEKGYSYFKMMRQDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVKGMNI 420

Query: 421 EPDEVVWGSLLNGCKIHGRPDLAEYSVKKLIEMDPENGGYRIMLANIYAELKKWDEVRKV 480
           EPDEVVWGSLLNGCKIHGR DLAEYSVKKLIEMDPENGGYRIMLANIYAEL+ WDEVR+V
Sbjct: 421 EPDEVVWGSLLNGCKIHGRLDLAEYSVKKLIEMDPENGGYRIMLANIYAELENWDEVRRV 480

Query: 481 RKLLKEQNAYKTPGCSWIEVDNQVYQFYSFDMTHPSAEQIYKTLES 527
           RKLLKEQNAYK PGCSWIEVDNQVYQFYSFDM+HP+AEQIYKTLES
Sbjct: 481 RKLLKEQNAYKIPGCSWIEVDNQVYQFYSFDMSHPNAEQIYKTLES 525

[Close]

BLAST of Clc08G01950.2 vs. ExPASy Swiss-Prot
Match: Q9C501 (Pentatricopeptide repeat-containing protein At1g33350 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E57 PE=2 SV=1)

HSP 1 Score: 595.5 bits (1534), Expect = 6.7e-169
Identity = 284/528 (53.79%), Postives = 377/528 (71.40%), Query Frame = 0


Query: 2   ASVLIQPHLNQLVLAALEKCSHLNHLKQLQGFLISLGHSQTQFFAFKLVRFCNLTLADLC 61
           +S + +  LNQ + A + K  HLNHLKQ+Q F+I  G S + F  FKL+RFC L L +L 
Sbjct: 15  SSHMAEQLLNQFISAVISKSRHLNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLS 74

Query: 62  YARFIFDNLTSPNVYLYTAMITAYASQ--PDPKAAFLLYRNMVRRGDPRPSHFIYPHVLK 121
           YARFIFD  + PN +LY A++TAY+S       +AF  +R MV R  PRP+HFIYP VLK
Sbjct: 75  YARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLK 134

Query: 122 SCPEVLESNGTKMVHTQVLKSGFAGYPVVQTAIVDSYSRFCSDIGNARQMFDEMLERSVV 181
           S P +  +  T +VHT + KSGF  Y VVQTA++ SY+   S I  ARQ+FDEM ER+VV
Sbjct: 135 STPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVV 194

Query: 182 SWTAMISGYAKLGNVESAMELFESMPERDVPAWNALIAGCAQNGFFCESIWLFKRMVSLA 241
           SWTAM+SGYA+ G++ +A+ LFE MPERDVP+WNA++A C QNG F E++ LF+RM++  
Sbjct: 195 SWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMIN-- 254

Query: 242 LEGNNKERENKPNKITVASALSACGHTGMLHLGKWIHGYVFKTYLGQDSFISSALLDMYA 301
                 E   +PN++TV   LSAC  TG L L K IH + ++  L  D F+S++L+D+Y 
Sbjct: 255 ------EPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYG 314

Query: 302 KCGNLKVARRVFDMITLKSLTSWNSLINCLALHGHSGTAIDLFAELVQCG-DGVKPDAVT 361
           KCGNL+ A  VF M + KSLT+WNS+INC ALHG S  AI +F E+++   + +KPD +T
Sbjct: 315 KCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHIT 374

Query: 362 FVGVLNACTHGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGM 421
           F+G+LNACTHGGLV KG  YF++M   + IEP+IEH+GCLIDLLGRAGRF+EA+EV+  M
Sbjct: 375 FIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTM 434

Query: 422 NIEPDEVVWGSLLNGCKIHGRPDLAEYSVKKLIEMDPENGGYRIMLANIYAELKKWDEVR 481
            ++ DE +WGSLLN CKIHG  DLAE +VK L+ ++P NGGY  M+AN+Y E+  W+E R
Sbjct: 435 KMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEAR 494

Query: 482 KVRKLLKEQNAYKTPGCSWIEVDNQVYQFYSFDMTHPSAEQIYKTLES 527
           + RK++K QNAYK PG S IE+DN+V+QFYS D +HP  E+IY  L+S
Sbjct: 495 RARKMIKHQNAYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMILDS 534

[Close]

BLAST of Clc08G01950.2 vs. ExPASy Swiss-Prot
Match: Q9SIL5 (Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E78 PE=2 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 1.5e-104
Identity = 189/508 (37.20%), Postives = 316/508 (62.20%), Query Frame = 0


Query: 18  LEKCSHLNHLKQLQGFLISLGHSQTQFFAFKLVRFCNLTLADLCYARFIFDNLTSPNVYL 77
           L++    N  K++   +I  G SQ+ F   K+V FC+  + D+ YA  +F+ +++PNV+L
Sbjct: 17  LQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCD-KIEDMDYATRLFNQVSNPNVFL 76

Query: 78  YTAMITAYASQPDPKAAFLLYRNMVRRGDPRPSHFIYPHVLKSCPEVLESNGTKMVHTQV 137
           Y ++I AY           +Y+ ++R+    P  F +P + KSC  +      K VH  +
Sbjct: 77  YNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHL 136

Query: 138 LKSGFAGYPVVQTAIVDSYSRFCSDIGNARQMFDEMLERSVVSWTAMISGYAKLGNVESA 197
            K G   + V + A++D Y +F  D+ +A ++FDEM ER V+SW +++SGYA+LG ++ A
Sbjct: 137 CKFGPRFHVVTENALIDMYMKF-DDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKA 196

Query: 198 MELFESMPERDVPAWNALIAGCAQNGFFCESIWLFKRMVSLALEGNNKERENKPNKITVA 257
             LF  M ++ + +W A+I+G    G + E++  F+ M    +E         P++I++ 
Sbjct: 197 KGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIE---------PDEISLI 256

Query: 258 SALSACGHTGMLHLGKWIHGYVFKTYLGQDSFISSALLDMYAKCGNLKVARRVFDMITLK 317
           S L +C   G L LGKWIH Y  +    + + + +AL++MY+KCG +  A ++F  +  K
Sbjct: 257 SVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGK 316

Query: 318 SLTSWNSLINCLALHGHSGTAIDLFAELVQCGDGVKPDAVTFVGVLNACTHGGLVEKGYS 377
            + SW+++I+  A HG++  AI+ F E+ +    VKP+ +TF+G+L+AC+H G+ ++G  
Sbjct: 317 DVISWSTMISGYAYHGNAHGAIETFNEMQRA--KVKPNGITFLGLLSACSHVGMWQEGLR 376

Query: 378 YFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNGCKIH 437
           YF+MMR+DY IEP+IEH+GCLID+L RAG+ E A+E+ + M ++PD  +WGSLL+ C+  
Sbjct: 377 YFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTP 436

Query: 438 GRPDLAEYSVKKLIEMDPENGGYRIMLANIYAELKKWDEVRKVRKLLKEQNAYKTPGCSW 497
           G  D+A  ++  L+E++PE+ G  ++LANIYA+L KW++V ++RK+++ +N  KTPG S 
Sbjct: 437 GNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSL 496

Query: 498 IEVDNQVYQFYSFDMTHPSAEQIYKTLE 526
           IEV+N V +F S D + P   +I   L+
Sbjct: 497 IEVNNIVQEFVSGDNSKPFWTEISIVLQ 511

[Close]

BLAST of Clc08G01950.2 vs. ExPASy Swiss-Prot
Match: Q9FIF7 (Putative pentatricopeptide repeat-containing protein At5g59200, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-E41 PE=3 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 4.9e-103
Identity = 191/513 (37.23%), Postives = 306/513 (59.65%), Query Frame = 0


Query: 14  VLAALEKCSHLNHLKQLQGFLISLGHSQTQFFAFKLVRFCNLTLADLCYARFIFDNLTSP 73
           +++ L  C ++ H+  +   +I   H Q  F  F+L+R C+ TL  + YA  +F  +++P
Sbjct: 32  LISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCS-TLDSVDYAYDVFSYVSNP 91

Query: 74  NVYLYTAMITAYASQPDPKAAFLLYRNMVRRGDPRPSHFIYPHVLKSCPEVLESNGTKMV 133
           NVYLYTAMI  + S         LY  M+      P +++   VLK+C    +    + +
Sbjct: 92  NVYLYTAMIDGFVSSGRSADGVSLYHRMI-HNSVLPDNYVITSVLKAC----DLKVCREI 151

Query: 134 HTQVLKSGFAGYPVVQTAIVDSYSRFCSDIGNARQMFDEMLERSVVSWTAMISGYAKLGN 193
           H QVLK GF     V   +++ Y +   ++ NA++MFDEM +R  V+ T MI+ Y++ G 
Sbjct: 152 HAQVLKLGFGSSRSVGLKMMEIYGK-SGELVNAKKMFDEMPDRDHVAATVMINCYSECGF 211

Query: 194 VESAMELFESMPERDVPAWNALIAGCAQNGFFCESIWLFKRMVSLALEGNNKEREN-KPN 253
           ++ A+ELF+ +  +D   W A+I G  +N    +++ LF+ M          + EN   N
Sbjct: 212 IKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREM----------QMENVSAN 271

Query: 254 KITVASALSACGHTGMLHLGKWIHGYVFKTYLGQDSFISSALLDMYAKCGNLKVARRVFD 313
           + T    LSAC   G L LG+W+H +V    +   +F+ +AL++MY++CG++  ARRVF 
Sbjct: 272 EFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFR 331

Query: 314 MITLKSLTSWNSLINCLALHGHSGTAIDLFAELVQCGDGVKPDAVTFVGVLNACTHGGLV 373
           ++  K + S+N++I+ LA+HG S  AI+ F ++V    G +P+ VT V +LNAC+HGGL+
Sbjct: 332 VMRDKDVISYNTMISGLAMHGASVEAINEFRDMV--NRGFRPNQVTLVALLNACSHGGLL 391

Query: 374 EKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLN 433
           + G   F  M+R +++EPQIEH+GC++DLLGR GR EEA   +  + IEPD ++ G+LL+
Sbjct: 392 DIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLS 451

Query: 434 GCKIHGRPDLAEYSVKKLIEMDPENGGYRIMLANIYAELKKWDEVRKVRKLLKEQNAYKT 493
            CKIHG  +L E   K+L E +  + G  ++L+N+YA   KW E  ++R+ +++    K 
Sbjct: 452 ACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKE 511

Query: 494 PGCSWIEVDNQVYQFYSFDMTHPSAEQIYKTLE 526
           PGCS IEVDNQ+++F   D+ HP  E IY+ L+
Sbjct: 512 PGCSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQ 525

[Close]

BLAST of Clc08G01950.2 vs. ExPASy Swiss-Prot
Match: Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 7.8e-101
Identity = 186/508 (36.61%), Postives = 295/508 (58.07%), Query Frame = 0


Query: 15  LAALEKCSHLNHLKQLQGFLISLGHSQTQFFAFKLVRFC-NLTLAD-LCYARFIFDNLTS 74
           ++ L++CS    LKQ+   ++  G  Q  +   K + FC + T +D L YA+ +FD    
Sbjct: 18  MSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDR 77

Query: 75  PNVYLYTAMITAYASQPDPKAAFLLYRNMVRRGDPRPSHFIYPHVLKSCPEVLESNGTKM 134
           P+ +L+  MI  ++   +P+ + LLY+ M+    P  + + +P +LK+C  +     T  
Sbjct: 78  PDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPH-NAYTFPSLLKACSNLSAFEETTQ 137

Query: 135 VHTQVLKSGFAGYPVVQTAIVDSYSRFCSDIGNARQMFDEMLERSVVSWTAMISGYAKLG 194
           +H Q+ K G+        ++++SY+    +   A  +FD + E   VSW ++I GY K G
Sbjct: 138 IHAQITKLGYENDVYAVNSLINSYA-VTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAG 197

Query: 195 NVESAMELFESMPERDVPAWNALIAGCAQNGFFCESIWLFKRMVSLALEGNNKERENKPN 254
            ++ A+ LF  M E++  +W  +I+G  Q     E++ LF  M +  +E         P+
Sbjct: 198 KMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVE---------PD 257

Query: 255 KITVASALSACGHTGMLHLGKWIHGYVFKTYLGQDSFISSALLDMYAKCGNLKVARRVFD 314
            +++A+ALSAC   G L  GKWIH Y+ KT +  DS +   L+DMYAKCG ++ A  VF 
Sbjct: 258 NVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFK 317

Query: 315 MITLKSLTSWNSLINCLALHGHSGTAIDLFAELVQCGDGVKPDAVTFVGVLNACTHGGLV 374
            I  KS+ +W +LI+  A HGH   AI  F E+ +   G+KP+ +TF  VL AC++ GLV
Sbjct: 318 NIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKM--GIKPNVITFTAVLTACSYTGLV 377

Query: 375 EKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLN 434
           E+G   F  M RDY+++P IEH+GC++DLLGRAG  +EA   ++ M ++P+ V+WG+LL 
Sbjct: 378 EEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLK 437

Query: 435 GCKIHGRPDLAEYSVKKLIEMDPENGGYRIMLANIYAELKKWDEVRKVRKLLKEQNAYKT 494
            C+IH   +L E   + LI +DP +GG  +  ANI+A  KKWD+  + R+L+KEQ   K 
Sbjct: 438 ACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKV 497

Query: 495 PGCSWIEVDNQVYQFYSFDMTHPSAEQI 521
           PGCS I ++   ++F + D +HP  E+I
Sbjct: 498 PGCSTISLEGTTHEFLAGDRSHPEIEKI 512

[Close]

BLAST of Clc08G01950.2 vs. ExPASy Swiss-Prot
Match: Q9FNN7 (Pentatricopeptide repeat-containing protein At5g08510 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E20 PE=2 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 1.0e-100
Identity = 187/504 (37.10%), Postives = 309/504 (61.31%), Query Frame = 0


Query: 24  LNHLKQLQGFLISLGHSQTQFFAFKLVRFCNLTLADLCYARFIFDNLTSPNVYLYTAMIT 83
           +N +KQL    +  G  +T+    +L     L + +L YAR +FD+  +   +LY  +I 
Sbjct: 1   MNGIKQLHAHCLRTGVDETKDLLQRL-----LLIPNLVYARKLFDHHQNSCTFLYNKLIQ 60

Query: 84  AYASQPDPKAAFLLYRNMVRRGDPRPSHFIYPHVLKSCPEVLESNGTKMVHTQVLKSGFA 143
           AY     P  + +LY N++     RPSH  +  +  +      +   +++H+Q  +SGF 
Sbjct: 61  AYYVHHQPHESIVLY-NLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFE 120

Query: 144 GYPVVQTAIVDSYSRFCSDIGNARQMFDEMLERSVVSWTAMISGYAKLGNVESAMELFES 203
                 T ++ +Y++    +  AR++FDEM +R V  W AMI+GY + G++++AMELF+S
Sbjct: 121 SDSFCCTTLITAYAKL-GALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDS 180

Query: 204 MPERDVPAWNALIAGCAQNGFFCESIWLFKRMVSLALEGNNKERENKPNKITVASALSAC 263
           MP ++V +W  +I+G +QNG + E++ +F  M         K++  KPN ITV S L AC
Sbjct: 181 MPRKNVTSWTTVISGFSQNGNYSEALKMFLCM--------EKDKSVKPNHITVVSVLPAC 240

Query: 264 GHTGMLHLGKWIHGYVFKTYLGQDSFISSALLDMYAKCGNLKVARRVFDMI-TLKSLTSW 323
            + G L +G+ + GY  +     + ++ +A ++MY+KCG + VA+R+F+ +   ++L SW
Sbjct: 241 ANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSW 300

Query: 324 NSLINCLALHGHSGTAIDLFAELVQCGDGVKPDAVTFVGVLNACTHGGLVEKGYSYFEMM 383
           NS+I  LA HG    A+ LFA++++  +G KPDAVTFVG+L AC HGG+V KG   F+ M
Sbjct: 301 NSMIGSLATHGKHDEALTLFAQMLR--EGEKPDAVTFVGLLLACVHGGMVVKGQELFKSM 360

Query: 384 RRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNGCKIHGRPDL 443
              + I P++EH+GC+IDLLGR G+ +EA ++++ M ++PD VVWG+LL  C  HG  ++
Sbjct: 361 EEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEI 420

Query: 444 AEYSVKKLIEMDPENGGYRIMLANIYAELKKWDEVRKVRKLLKEQNAYKTPGCSW-IEVD 503
           AE + + L +++P N G  ++++NIYA  +KWD V ++RKL+K++   K  G S+ +EV 
Sbjct: 421 AEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVG 480

Query: 504 NQVYQFYSFDMTHPSAEQIYKTLE 526
             V++F   D +HP + +IY+ LE
Sbjct: 481 VDVHKFTVEDKSHPRSYEIYQVLE 487

[Close]

BLAST of Clc08G01950.2 vs. ExPASy TrEMBL
Match: A0A1S3CAA7 (pentatricopeptide repeat-containing protein At1g33350 OS=Cucumis melo OX=3656 GN=LOC103498615 PE=4 SV=1)

HSP 1 Score: 997.3 bits (2577), Expect = 2.8e-287
Identity = 482/526 (91.63%), Postives = 502/526 (95.44%), Query Frame = 0


Query: 1   MASVLIQPHLNQLVLAALEKCSHLNHLKQLQGFLISLGHSQTQFFAFKLVRFCNLTLADL 60
           M+SV IQPHL QLV+AALEKCS+LNHLKQLQGFLIS GHSQTQFFAFKLVRFCNLTL DL
Sbjct: 26  MSSVSIQPHLYQLVVAALEKCSNLNHLKQLQGFLISHGHSQTQFFAFKLVRFCNLTLTDL 85

Query: 61  CYARFIFDNLTSPNVYLYTAMITAYASQPDPKAAFLLYRNMVRRGDPRPSHFIYPHVLKS 120
           CYAR+IFDNLTSPNVYLYTAMITAYA+ PDPKAAFLLYRNMVR G  RP+HFIYPHVLKS
Sbjct: 86  CYARYIFDNLTSPNVYLYTAMITAYAAYPDPKAAFLLYRNMVRHGAIRPNHFIYPHVLKS 145

Query: 121 CPEVLESNGTKMVHTQVLKSGFAGYPVVQTAIVDSYSRFCSDIGNARQMFDEMLERSVVS 180
           CP+VL SN TKMVHTQVLKSGF  YPVVQTAIVDSYSRF S IGNARQMFDEM+ERSVVS
Sbjct: 146 CPDVLGSNATKMVHTQVLKSGFGRYPVVQTAIVDSYSRFSSVIGNARQMFDEMVERSVVS 205

Query: 181 WTAMISGYAKLGNVESAMELFESMPERDVPAWNALIAGCAQNGFFCESIWLFKRMVSLAL 240
           WTAMISGYA+LGN +SA+ELFESMPERDVPAWNALIAGCAQNGFFCE+IWLFK+MVSLAL
Sbjct: 206 WTAMISGYARLGNFDSAIELFESMPERDVPAWNALIAGCAQNGFFCEAIWLFKKMVSLAL 265

Query: 241 EGNNKERENKPNKITVASALSACGHTGMLHLGKWIHGYVFKTYLGQDSFISSALLDMYAK 300
           EGNN +RENKPNK T+ASALSACG+TGMLHLGKWIHGYVFKTY GQDSFIS+ALLDMY K
Sbjct: 266 EGNNNDRENKPNKTTLASALSACGNTGMLHLGKWIHGYVFKTYPGQDSFISNALLDMYGK 325

Query: 301 CGNLKVARRVFDMITLKSLTSWNSLINCLALHGHSGTAIDLFAELVQCGDGVKPDAVTFV 360
           CGNLKVARRVFDMITLKSLTSWNSLINCLALHGHSG+AIDLFAELVQCGDGVKPD VTFV
Sbjct: 326 CGNLKVARRVFDMITLKSLTSWNSLINCLALHGHSGSAIDLFAELVQCGDGVKPDEVTFV 385

Query: 361 GVLNACTHGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNI 420
           GVLNACTHGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNI
Sbjct: 386 GVLNACTHGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNI 445

Query: 421 EPDEVVWGSLLNGCKIHGRPDLAEYSVKKLIEMDPENGGYRIMLANIYAELKKWDEVRKV 480
           EPDEVVWGSLLN CKIHGR DLAEYSVKKLIEMDP+NGGYRIMLANIYAEL KWDEVRKV
Sbjct: 446 EPDEVVWGSLLNACKIHGRSDLAEYSVKKLIEMDPKNGGYRIMLANIYAELGKWDEVRKV 505

Query: 481 RKLLKEQNAYKTPGCSWIEVDNQVYQFYSFDMTHPSAEQIYKTLES 527
           RKLLKE+NAYKTPGCSWIEVDNQVYQFYSFDMTHPS EQIYKTLES
Sbjct: 506 RKLLKEKNAYKTPGCSWIEVDNQVYQFYSFDMTHPSVEQIYKTLES 551

[Close]

BLAST of Clc08G01950.2 vs. ExPASy TrEMBL
Match: A0A6J1IF22 (pentatricopeptide repeat-containing protein At1g33350 OS=Cucurbita maxima OX=3661 GN=LOC111472677 PE=4 SV=1)

HSP 1 Score: 989.6 bits (2557), Expect = 5.9e-285
Identity = 477/526 (90.68%), Postives = 505/526 (96.01%), Query Frame = 0


Query: 1   MASVLIQPHLNQLVLAALEKCSHLNHLKQLQGFLISLGHSQTQFFAFKLVRFCNLTLADL 60
           MASV +QPHLNQLVL+ LEKCSHLNHLKQLQGFLISLGHSQTQF+AFKLVRFCNLTL DL
Sbjct: 1   MASVPMQPHLNQLVLSVLEKCSHLNHLKQLQGFLISLGHSQTQFYAFKLVRFCNLTLTDL 60

Query: 61  CYARFIFDNLTSPNVYLYTAMITAYASQPDPKAAFLLYRNMVRRGDPRPSHFIYPHVLKS 120
           CY+RFIFD+L+SPNVYLYTAMITAYAS+PD KAAFLLYRNMVRRG P P+HFIYPHVLKS
Sbjct: 61  CYSRFIFDHLSSPNVYLYTAMITAYASEPDSKAAFLLYRNMVRRGAPLPNHFIYPHVLKS 120

Query: 121 CPEVLESNGTKMVHTQVLKSGFAGYPVVQTAIVDSYSRFCSDIGNARQMFDEMLERSVVS 180
           CPE+LESNGTKMVH QVLKSGF GYPVVQTAIVD+YSRF +DIG ARQ+FDEMLERSVVS
Sbjct: 121 CPELLESNGTKMVHAQVLKSGFGGYPVVQTAIVDAYSRFRTDIGIARQVFDEMLERSVVS 180

Query: 181 WTAMISGYAKLGNVESAMELFESMPERDVPAWNALIAGCAQNGFFCESIWLFKRMVSLAL 240
           WTAMISGYA+LG++++AM LFESMPERD+PAWNALIAGCAQNGFFCE+I LFKRMVSLAL
Sbjct: 181 WTAMISGYARLGDIDNAMALFESMPERDIPAWNALIAGCAQNGFFCEAIGLFKRMVSLAL 240

Query: 241 EGNNKERENKPNKITVASALSACGHTGMLHLGKWIHGYVFKTYLGQDSFISSALLDMYAK 300
           EG NKERE KPNKITVASALS+CGHTGMLHLGKWIHGYVFKTYLGQDSFIS+ALLDMY K
Sbjct: 241 EG-NKERETKPNKITVASALSSCGHTGMLHLGKWIHGYVFKTYLGQDSFISNALLDMYGK 300

Query: 301 CGNLKVARRVFDMITLKSLTSWNSLINCLALHGHSGTAIDLFAELVQCGDGVKPDAVTFV 360
           CGNLKVARRVFDMITLKSLTSWNSLINCLALHGHSG+AIDLF ELVQC DGV+PDAVTFV
Sbjct: 301 CGNLKVARRVFDMITLKSLTSWNSLINCLALHGHSGSAIDLFLELVQCRDGVQPDAVTFV 360

Query: 361 GVLNACTHGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNI 420
           GVLNACTHGGLVEKGYSYF+MMR+DYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNI
Sbjct: 361 GVLNACTHGGLVEKGYSYFKMMRQDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNI 420

Query: 421 EPDEVVWGSLLNGCKIHGRPDLAEYSVKKLIEMDPENGGYRIMLANIYAELKKWDEVRKV 480
           EPDEVVWGSLLNGCKIHGR DLAEYSVKKLIEMDPENGGYRIMLANIYAEL+ WDEVRKV
Sbjct: 421 EPDEVVWGSLLNGCKIHGRLDLAEYSVKKLIEMDPENGGYRIMLANIYAELENWDEVRKV 480

Query: 481 RKLLKEQNAYKTPGCSWIEVDNQVYQFYSFDMTHPSAEQIYKTLES 527
           RKLLKEQNAYK PGCSWIEVDN VYQFYSFDM+HP+AEQIYKTLES
Sbjct: 481 RKLLKEQNAYKIPGCSWIEVDNHVYQFYSFDMSHPNAEQIYKTLES 525

[Close]

BLAST of Clc08G01950.2 vs. ExPASy TrEMBL
Match: A0A6J1EQ76 (pentatricopeptide repeat-containing protein At1g33350 OS=Cucurbita moschata OX=3662 GN=LOC111436680 PE=4 SV=1)

HSP 1 Score: 987.6 bits (2552), Expect = 2.2e-284
Identity = 475/526 (90.30%), Postives = 505/526 (96.01%), Query Frame = 0


Query: 1   MASVLIQPHLNQLVLAALEKCSHLNHLKQLQGFLISLGHSQTQFFAFKLVRFCNLTLADL 60
           MAS+ IQPHLNQLVL+ LEKCSHLNHLKQLQGFLISLG SQTQF+AFKLVRFCNLTL DL
Sbjct: 1   MASLPIQPHLNQLVLSVLEKCSHLNHLKQLQGFLISLGQSQTQFYAFKLVRFCNLTLTDL 60

Query: 61  CYARFIFDNLTSPNVYLYTAMITAYASQPDPKAAFLLYRNMVRRGDPRPSHFIYPHVLKS 120
           CY+RFIFD+L+SPNVYLYTAMITAYAS+ D KAAFLLYRNMVRRGDP P+HFIYPHVLKS
Sbjct: 61  CYSRFIFDHLSSPNVYLYTAMITAYASELDSKAAFLLYRNMVRRGDPLPNHFIYPHVLKS 120

Query: 121 CPEVLESNGTKMVHTQVLKSGFAGYPVVQTAIVDSYSRFCSDIGNARQMFDEMLERSVVS 180
           CPE+LESNGTKMVH QVLKSGF GYPVVQTAIVD+YSRF ++IG ARQ+FDEMLERSVVS
Sbjct: 121 CPELLESNGTKMVHAQVLKSGFGGYPVVQTAIVDAYSRFRTEIGIARQVFDEMLERSVVS 180

Query: 181 WTAMISGYAKLGNVESAMELFESMPERDVPAWNALIAGCAQNGFFCESIWLFKRMVSLAL 240
           WTAM+SGYA+LG++++AM LFESMPERD+PAWNALIAGCAQNGFFCE+I LFKRMVSLAL
Sbjct: 181 WTAMVSGYARLGDIDNAMALFESMPERDIPAWNALIAGCAQNGFFCEAIGLFKRMVSLAL 240

Query: 241 EGNNKERENKPNKITVASALSACGHTGMLHLGKWIHGYVFKTYLGQDSFISSALLDMYAK 300
           EG NKERE KPNKITVASALSACGHTGMLHLGKWIHGYVFKTYLGQDSFIS+ALLDMY K
Sbjct: 241 EG-NKERETKPNKITVASALSACGHTGMLHLGKWIHGYVFKTYLGQDSFISNALLDMYGK 300

Query: 301 CGNLKVARRVFDMITLKSLTSWNSLINCLALHGHSGTAIDLFAELVQCGDGVKPDAVTFV 360
           CGNLKVARRVFDMITLKSLTSWNSLINCLALHGHSG+AIDLF ELVQCGDGVKPD VTFV
Sbjct: 301 CGNLKVARRVFDMITLKSLTSWNSLINCLALHGHSGSAIDLFLELVQCGDGVKPDGVTFV 360

Query: 361 GVLNACTHGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNI 420
           GVLNACTHGGLVEKGYSYF+MMR+DYDIEPQIEHFGCLIDLLGRAGRFEEAMEVV+GMNI
Sbjct: 361 GVLNACTHGGLVEKGYSYFKMMRQDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVKGMNI 420

Query: 421 EPDEVVWGSLLNGCKIHGRPDLAEYSVKKLIEMDPENGGYRIMLANIYAELKKWDEVRKV 480
           EPDEVVWGSLLNGCKIHGR DLAEYSVKKLIEMDPENGGYRIMLANIYAEL+ WDEVR+V
Sbjct: 421 EPDEVVWGSLLNGCKIHGRLDLAEYSVKKLIEMDPENGGYRIMLANIYAELENWDEVRRV 480

Query: 481 RKLLKEQNAYKTPGCSWIEVDNQVYQFYSFDMTHPSAEQIYKTLES 527
           RKLLKEQNAYK PGCSWIEVDNQVYQFYSFDM+HP+AEQIYKTLES
Sbjct: 481 RKLLKEQNAYKIPGCSWIEVDNQVYQFYSFDMSHPNAEQIYKTLES 525

[Close]

BLAST of Clc08G01950.2 vs. ExPASy TrEMBL
Match: A0A6J1DQX1 (pentatricopeptide repeat-containing protein At1g33350 OS=Momordica charantia OX=3673 GN=LOC111022983 PE=4 SV=1)

HSP 1 Score: 976.9 bits (2524), Expect = 3.9e-281
Identity = 471/526 (89.54%), Postives = 501/526 (95.25%), Query Frame = 0


Query: 1   MASVLIQPHLNQLVLAALEKCSHLNHLKQLQGFLISLGHSQTQFFAFKLVRFCNLTLADL 60
           MASV IQPHLNQLVL+ LEKCSHLNHLKQ+QGFLISLGHSQTQFFAFKLVRFCNLTLA+L
Sbjct: 1   MASVPIQPHLNQLVLSVLEKCSHLNHLKQIQGFLISLGHSQTQFFAFKLVRFCNLTLANL 60

Query: 61  CYARFIFDNLTSPNVYLYTAMITAYASQPDPKAAFLLYRNMVRRGDPRPSHFIYPHVLKS 120
            YARFIFD L SPNVYLYTAMITAYASQPD KAAF+LYR+MVRRG PRP+HFIYPHVLKS
Sbjct: 61  SYARFIFDQLNSPNVYLYTAMITAYASQPDSKAAFVLYRDMVRRGTPRPNHFIYPHVLKS 120

Query: 121 CPEVLESNGTKMVHTQVLKSGFAGYPVVQTAIVDSYSRFCSDIGNARQMFDEMLERSVVS 180
           CPEV ESN T+MVH Q+LKSGF  YPVVQTAIVDSYS+FCSDIG ARQMFDEM+ERSVVS
Sbjct: 121 CPEVXESNATQMVHAQILKSGFGRYPVVQTAIVDSYSKFCSDIGIARQMFDEMIERSVVS 180

Query: 181 WTAMISGYAKLGNVESAMELFESMPERDVPAWNALIAGCAQNGFFCESIWLFKRMVSLAL 240
           WTAMISGYA+LGN++ A+ LFESMPERDVPAWNA+IAG AQNGFFCE+IWLF+RMVSLA+
Sbjct: 181 WTAMISGYARLGNIDDAVALFESMPERDVPAWNAIIAGFAQNGFFCEAIWLFRRMVSLAM 240

Query: 241 EGNNKERENKPNKITVASALSACGHTGMLHLGKWIHGYVFKTYLGQDSFISSALLDMYAK 300
           E +++ERENKPNKITVASALSACGHTGMLHLGKWIHGYVFK+ L QDSFIS+ALLDMY K
Sbjct: 241 E-DDEERENKPNKITVASALSACGHTGMLHLGKWIHGYVFKS-LSQDSFISNALLDMYGK 300

Query: 301 CGNLKVARRVFDMITLKSLTSWNSLINCLALHGHSGTAIDLFAELVQCGDGVKPDAVTFV 360
           CGNLK+A+RVFDMITLKSLTSWNSLINCLALHGHS +AIDLF +LV+CGDGVKPD VTFV
Sbjct: 301 CGNLKIAKRVFDMITLKSLTSWNSLINCLALHGHSESAIDLFVKLVECGDGVKPDGVTFV 360

Query: 361 GVLNACTHGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNI 420
           GVLNACTHGGLVEKGYSYFEMMR+DY IEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNI
Sbjct: 361 GVLNACTHGGLVEKGYSYFEMMRQDYGIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNI 420

Query: 421 EPDEVVWGSLLNGCKIHGRPDLAEYSVKKLIEMDPENGGYRIMLANIYAELKKWDEVRKV 480
           EPDEVVWGSLLNGCKIHGR DLAEYSVKKLIEMDPENGGYRIMLANIYAEL+KWDEVRKV
Sbjct: 421 EPDEVVWGSLLNGCKIHGRSDLAEYSVKKLIEMDPENGGYRIMLANIYAELEKWDEVRKV 480

Query: 481 RKLLKEQNAYKTPGCSWIEVDNQVYQFYSFDMTHPSAEQIYKTLES 527
           RKLLKEQNAYKTPGCSWIEVDNQVYQFYSFDMTHPSAEQIYKTLES
Sbjct: 481 RKLLKEQNAYKTPGCSWIEVDNQVYQFYSFDMTHPSAEQIYKTLES 524

[Close]

BLAST of Clc08G01950.2 vs. ExPASy TrEMBL
Match: A0A5A7T7Y7 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001540 PE=4 SV=1)

HSP 1 Score: 954.1 bits (2465), Expect = 2.7e-274
Identity = 464/532 (87.22%), Postives = 491/532 (92.29%), Query Frame = 0


Query: 1   MASVLIQPHLNQLVLAALEKCSHLNHLKQLQGFLISLGHSQTQFFAFKLVRFCNLTLADL 60
           M+SV IQPHL QLV+AALEKCS+LNHLKQLQGFLIS GHSQTQFFAFKLVRFCNLTL DL
Sbjct: 1   MSSVSIQPHLYQLVVAALEKCSNLNHLKQLQGFLISHGHSQTQFFAFKLVRFCNLTLTDL 60

Query: 61  CYARFIFDNLTSPNVYLYTAMITAYASQPDPKAAFLLYRNMVRRGDPRPSHFIYPHVLKS 120
           CYAR+IFDNLTSPNVYLYTAMITAYA+ PDPKAAFLLYRNMVR G  RP+HFIYPHVLKS
Sbjct: 61  CYARYIFDNLTSPNVYLYTAMITAYAAYPDPKAAFLLYRNMVRHGAIRPNHFIYPHVLKS 120

Query: 121 CPEVLESNGTKMVHTQVLKSGFAGYPVVQTAIVDSYSRFCSDIGNARQMFDEMLERSVVS 180
           CP+VL SN TKMVHTQVLKSGF  YPVVQTAIVDSYSRF S IGNARQMFDEM+ERSVVS
Sbjct: 121 CPDVLGSNATKMVHTQVLKSGFGRYPVVQTAIVDSYSRFSSVIGNARQMFDEMVERSVVS 180

Query: 181 WTAMISGYAKLGNVESAMELFESMPERDVPAWNALIAGCAQNGFFCESIWLFKRMVSLAL 240
           WTAMISGYA+LGN +SA+ELFESMPERDVPAWNALIAGCAQNGFFCE+IWLFK+MVSLAL
Sbjct: 181 WTAMISGYARLGNFDSAIELFESMPERDVPAWNALIAGCAQNGFFCEAIWLFKKMVSLAL 240

Query: 241 EGNNKERENKPNKITVASALSACGHTGMLHLGKWIHGYVFKTYLGQDSFISSALLDMYAK 300
           EGNN +RENKPNK T+ASALSACG+TGMLHLGKWIHGYVFKTY GQDSFIS+ALLDMY K
Sbjct: 241 EGNNNDRENKPNKTTLASALSACGNTGMLHLGKWIHGYVFKTYPGQDSFISNALLDMYGK 300

Query: 301 CGNLKVARRVFDMITLKSLTSWNSLINCLALHGHSGTAIDLFAELVQCGDGVKPDAVTFV 360
           CGNLKVARRVFDMITLKSLTSWNSLINCLALHGHSG+AIDLFAELVQCGDGVKPD VTFV
Sbjct: 301 CGNLKVARRVFDMITLKSLTSWNSLINCLALHGHSGSAIDLFAELVQCGDGVKPDEVTFV 360

Query: 361 GVLNACTHGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNI 420
           GVLNACTHGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNI
Sbjct: 361 GVLNACTHGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNI 420

Query: 421 EPDEVVWGSLLNGCKIHGRPDLAEYSVKKLIEMDPENGGYRIMLANIYAELKKWDEVRKV 480
           EPDEVVWGSLLN CKIHGR DLAEYSVKKLIEMDP+NGGYRIMLANIYAEL KWDEVRKV
Sbjct: 421 EPDEVVWGSLLNACKIHGRSDLAEYSVKKLIEMDPKNGGYRIMLANIYAELGKWDEVRKV 480

Query: 481 RKLLKEQNAYKTPGCSWIEVDNQ----VYQFYSFDMTHPSAEQIYKTLESEK 529
           RKLLKE+NAYKTPGCSWIEVDNQ    ++Q  +F   H   +++    +  K
Sbjct: 481 RKLLKEKNAYKTPGCSWIEVDNQENEDLHQIGAFSTFHAIGDRLIAIYQMRK 532

[Close]

BLAST of Clc08G01950.2 vs. TAIR 10
Match: AT1G33350.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 595.5 bits (1534), Expect = 4.7e-170
Identity = 284/528 (53.79%), Postives = 377/528 (71.40%), Query Frame = 0


Query: 2   ASVLIQPHLNQLVLAALEKCSHLNHLKQLQGFLISLGHSQTQFFAFKLVRFCNLTLADLC 61
           +S + +  LNQ + A + K  HLNHLKQ+Q F+I  G S + F  FKL+RFC L L +L 
Sbjct: 15  SSHMAEQLLNQFISAVISKSRHLNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLS 74

Query: 62  YARFIFDNLTSPNVYLYTAMITAYASQ--PDPKAAFLLYRNMVRRGDPRPSHFIYPHVLK 121
           YARFIFD  + PN +LY A++TAY+S       +AF  +R MV R  PRP+HFIYP VLK
Sbjct: 75  YARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLK 134

Query: 122 SCPEVLESNGTKMVHTQVLKSGFAGYPVVQTAIVDSYSRFCSDIGNARQMFDEMLERSVV 181
           S P +  +  T +VHT + KSGF  Y VVQTA++ SY+   S I  ARQ+FDEM ER+VV
Sbjct: 135 STPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVV 194

Query: 182 SWTAMISGYAKLGNVESAMELFESMPERDVPAWNALIAGCAQNGFFCESIWLFKRMVSLA 241
           SWTAM+SGYA+ G++ +A+ LFE MPERDVP+WNA++A C QNG F E++ LF+RM++  
Sbjct: 195 SWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMIN-- 254

Query: 242 LEGNNKERENKPNKITVASALSACGHTGMLHLGKWIHGYVFKTYLGQDSFISSALLDMYA 301
                 E   +PN++TV   LSAC  TG L L K IH + ++  L  D F+S++L+D+Y 
Sbjct: 255 ------EPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYG 314

Query: 302 KCGNLKVARRVFDMITLKSLTSWNSLINCLALHGHSGTAIDLFAELVQCG-DGVKPDAVT 361
           KCGNL+ A  VF M + KSLT+WNS+INC ALHG S  AI +F E+++   + +KPD +T
Sbjct: 315 KCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHIT 374

Query: 362 FVGVLNACTHGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGM 421
           F+G+LNACTHGGLV KG  YF++M   + IEP+IEH+GCLIDLLGRAGRF+EA+EV+  M
Sbjct: 375 FIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTM 434

Query: 422 NIEPDEVVWGSLLNGCKIHGRPDLAEYSVKKLIEMDPENGGYRIMLANIYAELKKWDEVR 481
            ++ DE +WGSLLN CKIHG  DLAE +VK L+ ++P NGGY  M+AN+Y E+  W+E R
Sbjct: 435 KMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEAR 494

Query: 482 KVRKLLKEQNAYKTPGCSWIEVDNQVYQFYSFDMTHPSAEQIYKTLES 527
           + RK++K QNAYK PG S IE+DN+V+QFYS D +HP  E+IY  L+S
Sbjct: 495 RARKMIKHQNAYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMILDS 534

[Close]

BLAST of Clc08G01950.2 vs. TAIR 10
Match: AT2G20540.1 (mitochondrial editing factor 21 )

HSP 1 Score: 381.7 bits (979), Expect = 1.1e-105
Identity = 189/508 (37.20%), Postives = 316/508 (62.20%), Query Frame = 0


Query: 18  LEKCSHLNHLKQLQGFLISLGHSQTQFFAFKLVRFCNLTLADLCYARFIFDNLTSPNVYL 77
           L++    N  K++   +I  G SQ+ F   K+V FC+  + D+ YA  +F+ +++PNV+L
Sbjct: 17  LQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCD-KIEDMDYATRLFNQVSNPNVFL 76

Query: 78  YTAMITAYASQPDPKAAFLLYRNMVRRGDPRPSHFIYPHVLKSCPEVLESNGTKMVHTQV 137
           Y ++I AY           +Y+ ++R+    P  F +P + KSC  +      K VH  +
Sbjct: 77  YNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHL 136

Query: 138 LKSGFAGYPVVQTAIVDSYSRFCSDIGNARQMFDEMLERSVVSWTAMISGYAKLGNVESA 197
            K G   + V + A++D Y +F  D+ +A ++FDEM ER V+SW +++SGYA+LG ++ A
Sbjct: 137 CKFGPRFHVVTENALIDMYMKF-DDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKA 196

Query: 198 MELFESMPERDVPAWNALIAGCAQNGFFCESIWLFKRMVSLALEGNNKERENKPNKITVA 257
             LF  M ++ + +W A+I+G    G + E++  F+ M    +E         P++I++ 
Sbjct: 197 KGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIE---------PDEISLI 256

Query: 258 SALSACGHTGMLHLGKWIHGYVFKTYLGQDSFISSALLDMYAKCGNLKVARRVFDMITLK 317
           S L +C   G L LGKWIH Y  +    + + + +AL++MY+KCG +  A ++F  +  K
Sbjct: 257 SVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGK 316

Query: 318 SLTSWNSLINCLALHGHSGTAIDLFAELVQCGDGVKPDAVTFVGVLNACTHGGLVEKGYS 377
            + SW+++I+  A HG++  AI+ F E+ +    VKP+ +TF+G+L+AC+H G+ ++G  
Sbjct: 317 DVISWSTMISGYAYHGNAHGAIETFNEMQRA--KVKPNGITFLGLLSACSHVGMWQEGLR 376

Query: 378 YFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNGCKIH 437
           YF+MMR+DY IEP+IEH+GCLID+L RAG+ E A+E+ + M ++PD  +WGSLL+ C+  
Sbjct: 377 YFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTP 436

Query: 438 GRPDLAEYSVKKLIEMDPENGGYRIMLANIYAELKKWDEVRKVRKLLKEQNAYKTPGCSW 497
           G  D+A  ++  L+E++PE+ G  ++LANIYA+L KW++V ++RK+++ +N  KTPG S 
Sbjct: 437 GNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSL 496

Query: 498 IEVDNQVYQFYSFDMTHPSAEQIYKTLE 526
           IEV+N V +F S D + P   +I   L+
Sbjct: 497 IEVNNIVQEFVSGDNSKPFWTEISIVLQ 511

[Close]

BLAST of Clc08G01950.2 vs. TAIR 10
Match: AT5G59200.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 376.7 bits (966), Expect = 3.5e-104
Identity = 191/513 (37.23%), Postives = 306/513 (59.65%), Query Frame = 0


Query: 14  VLAALEKCSHLNHLKQLQGFLISLGHSQTQFFAFKLVRFCNLTLADLCYARFIFDNLTSP 73
           +++ L  C ++ H+  +   +I   H Q  F  F+L+R C+ TL  + YA  +F  +++P
Sbjct: 32  LISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCS-TLDSVDYAYDVFSYVSNP 91

Query: 74  NVYLYTAMITAYASQPDPKAAFLLYRNMVRRGDPRPSHFIYPHVLKSCPEVLESNGTKMV 133
           NVYLYTAMI  + S         LY  M+      P +++   VLK+C    +    + +
Sbjct: 92  NVYLYTAMIDGFVSSGRSADGVSLYHRMI-HNSVLPDNYVITSVLKAC----DLKVCREI 151

Query: 134 HTQVLKSGFAGYPVVQTAIVDSYSRFCSDIGNARQMFDEMLERSVVSWTAMISGYAKLGN 193
           H QVLK GF     V   +++ Y +   ++ NA++MFDEM +R  V+ T MI+ Y++ G 
Sbjct: 152 HAQVLKLGFGSSRSVGLKMMEIYGK-SGELVNAKKMFDEMPDRDHVAATVMINCYSECGF 211

Query: 194 VESAMELFESMPERDVPAWNALIAGCAQNGFFCESIWLFKRMVSLALEGNNKEREN-KPN 253
           ++ A+ELF+ +  +D   W A+I G  +N    +++ LF+ M          + EN   N
Sbjct: 212 IKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREM----------QMENVSAN 271

Query: 254 KITVASALSACGHTGMLHLGKWIHGYVFKTYLGQDSFISSALLDMYAKCGNLKVARRVFD 313
           + T    LSAC   G L LG+W+H +V    +   +F+ +AL++MY++CG++  ARRVF 
Sbjct: 272 EFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFR 331

Query: 314 MITLKSLTSWNSLINCLALHGHSGTAIDLFAELVQCGDGVKPDAVTFVGVLNACTHGGLV 373
           ++  K + S+N++I+ LA+HG S  AI+ F ++V    G +P+ VT V +LNAC+HGGL+
Sbjct: 332 VMRDKDVISYNTMISGLAMHGASVEAINEFRDMV--NRGFRPNQVTLVALLNACSHGGLL 391

Query: 374 EKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLN 433
           + G   F  M+R +++EPQIEH+GC++DLLGR GR EEA   +  + IEPD ++ G+LL+
Sbjct: 392 DIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLS 451

Query: 434 GCKIHGRPDLAEYSVKKLIEMDPENGGYRIMLANIYAELKKWDEVRKVRKLLKEQNAYKT 493
            CKIHG  +L E   K+L E +  + G  ++L+N+YA   KW E  ++R+ +++    K 
Sbjct: 452 ACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKE 511

Query: 494 PGCSWIEVDNQVYQFYSFDMTHPSAEQIYKTLE 526
           PGCS IEVDNQ+++F   D+ HP  E IY+ L+
Sbjct: 512 PGCSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQ 525

[Close]

BLAST of Clc08G01950.2 vs. TAIR 10
Match: AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 369.4 bits (947), Expect = 5.5e-102
Identity = 186/508 (36.61%), Postives = 295/508 (58.07%), Query Frame = 0


Query: 15  LAALEKCSHLNHLKQLQGFLISLGHSQTQFFAFKLVRFC-NLTLAD-LCYARFIFDNLTS 74
           ++ L++CS    LKQ+   ++  G  Q  +   K + FC + T +D L YA+ +FD    
Sbjct: 18  MSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDR 77

Query: 75  PNVYLYTAMITAYASQPDPKAAFLLYRNMVRRGDPRPSHFIYPHVLKSCPEVLESNGTKM 134
           P+ +L+  MI  ++   +P+ + LLY+ M+    P  + + +P +LK+C  +     T  
Sbjct: 78  PDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPH-NAYTFPSLLKACSNLSAFEETTQ 137

Query: 135 VHTQVLKSGFAGYPVVQTAIVDSYSRFCSDIGNARQMFDEMLERSVVSWTAMISGYAKLG 194
           +H Q+ K G+        ++++SY+    +   A  +FD + E   VSW ++I GY K G
Sbjct: 138 IHAQITKLGYENDVYAVNSLINSYA-VTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAG 197

Query: 195 NVESAMELFESMPERDVPAWNALIAGCAQNGFFCESIWLFKRMVSLALEGNNKERENKPN 254
            ++ A+ LF  M E++  +W  +I+G  Q     E++ LF  M +  +E         P+
Sbjct: 198 KMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVE---------PD 257

Query: 255 KITVASALSACGHTGMLHLGKWIHGYVFKTYLGQDSFISSALLDMYAKCGNLKVARRVFD 314
            +++A+ALSAC   G L  GKWIH Y+ KT +  DS +   L+DMYAKCG ++ A  VF 
Sbjct: 258 NVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFK 317

Query: 315 MITLKSLTSWNSLINCLALHGHSGTAIDLFAELVQCGDGVKPDAVTFVGVLNACTHGGLV 374
            I  KS+ +W +LI+  A HGH   AI  F E+ +   G+KP+ +TF  VL AC++ GLV
Sbjct: 318 NIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKM--GIKPNVITFTAVLTACSYTGLV 377

Query: 375 EKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLN 434
           E+G   F  M RDY+++P IEH+GC++DLLGRAG  +EA   ++ M ++P+ V+WG+LL 
Sbjct: 378 EEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLK 437

Query: 435 GCKIHGRPDLAEYSVKKLIEMDPENGGYRIMLANIYAELKKWDEVRKVRKLLKEQNAYKT 494
            C+IH   +L E   + LI +DP +GG  +  ANI+A  KKWD+  + R+L+KEQ   K 
Sbjct: 438 ACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKV 497

Query: 495 PGCSWIEVDNQVYQFYSFDMTHPSAEQI 521
           PGCS I ++   ++F + D +HP  E+I
Sbjct: 498 PGCSTISLEGTTHEFLAGDRSHPEIEKI 512

[Close]

BLAST of Clc08G01950.2 vs. TAIR 10
Match: AT5G08510.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 369.0 bits (946), Expect = 7.2e-102
Identity = 187/504 (37.10%), Postives = 309/504 (61.31%), Query Frame = 0


Query: 24  LNHLKQLQGFLISLGHSQTQFFAFKLVRFCNLTLADLCYARFIFDNLTSPNVYLYTAMIT 83
           +N +KQL    +  G  +T+    +L     L + +L YAR +FD+  +   +LY  +I 
Sbjct: 1   MNGIKQLHAHCLRTGVDETKDLLQRL-----LLIPNLVYARKLFDHHQNSCTFLYNKLIQ 60

Query: 84  AYASQPDPKAAFLLYRNMVRRGDPRPSHFIYPHVLKSCPEVLESNGTKMVHTQVLKSGFA 143
           AY     P  + +LY N++     RPSH  +  +  +      +   +++H+Q  +SGF 
Sbjct: 61  AYYVHHQPHESIVLY-NLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFE 120

Query: 144 GYPVVQTAIVDSYSRFCSDIGNARQMFDEMLERSVVSWTAMISGYAKLGNVESAMELFES 203
                 T ++ +Y++    +  AR++FDEM +R V  W AMI+GY + G++++AMELF+S
Sbjct: 121 SDSFCCTTLITAYAKL-GALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDS 180

Query: 204 MPERDVPAWNALIAGCAQNGFFCESIWLFKRMVSLALEGNNKERENKPNKITVASALSAC 263
           MP ++V +W  +I+G +QNG + E++ +F  M         K++  KPN ITV S L AC
Sbjct: 181 MPRKNVTSWTTVISGFSQNGNYSEALKMFLCM--------EKDKSVKPNHITVVSVLPAC 240

Query: 264 GHTGMLHLGKWIHGYVFKTYLGQDSFISSALLDMYAKCGNLKVARRVFDMI-TLKSLTSW 323
            + G L +G+ + GY  +     + ++ +A ++MY+KCG + VA+R+F+ +   ++L SW
Sbjct: 241 ANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSW 300

Query: 324 NSLINCLALHGHSGTAIDLFAELVQCGDGVKPDAVTFVGVLNACTHGGLVEKGYSYFEMM 383
           NS+I  LA HG    A+ LFA++++  +G KPDAVTFVG+L AC HGG+V KG   F+ M
Sbjct: 301 NSMIGSLATHGKHDEALTLFAQMLR--EGEKPDAVTFVGLLLACVHGGMVVKGQELFKSM 360

Query: 384 RRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNGCKIHGRPDL 443
              + I P++EH+GC+IDLLGR G+ +EA ++++ M ++PD VVWG+LL  C  HG  ++
Sbjct: 361 EEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEI 420

Query: 444 AEYSVKKLIEMDPENGGYRIMLANIYAELKKWDEVRKVRKLLKEQNAYKTPGCSW-IEVD 503
           AE + + L +++P N G  ++++NIYA  +KWD V ++RKL+K++   K  G S+ +EV 
Sbjct: 421 AEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVG 480

Query: 504 NQVYQFYSFDMTHPSAEQIYKTLE 526
             V++F   D +HP + +IY+ LE
Sbjct: 481 VDVHKFTVEDKSHPRSYEIYQVLE 487

The following BLAST results are available for this feature:

BLAST of Clc08G01950.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889416.1	3.5e-300	95.06	pentatricopeptide repeat-containing protein At1g33350-like [Benincasa hispida]	[more]
XP_008459497.1	5.8e-287	91.63	PREDICTED: pentatricopeptide repeat-containing protein At1g33350 [Cucumis melo]	[more]
XP_004141609.3	1.2e-284	90.11	pentatricopeptide repeat-containing protein At1g33350 [Cucumis sativus]	[more]
XP_022974048.1	1.2e-284	90.68	pentatricopeptide repeat-containing protein At1g33350 [Cucurbita maxima]	[more]
XP_022930176.1	4.6e-284	90.30	pentatricopeptide repeat-containing protein At1g33350 [Cucurbita moschata]	[more]

BLAST of Clc08G01950.2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C501	6.7e-169	53.79	Pentatricopeptide repeat-containing protein At1g33350 OS=Arabidopsis thaliana OX...	[more]
Q9SIL5	1.5e-104	37.20	Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX...	[more]
Q9FIF7	4.9e-103	37.23	Putative pentatricopeptide repeat-containing protein At5g59200, chloroplastic OS...	[more]
Q9FJY7	7.8e-101	36.61	Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX...	[more]
Q9FNN7	1.0e-100	37.10	Pentatricopeptide repeat-containing protein At5g08510 OS=Arabidopsis thaliana OX...	[more]

BLAST of Clc08G01950.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CAA7	2.8e-287	91.63	pentatricopeptide repeat-containing protein At1g33350 OS=Cucumis melo OX=3656 GN...	[more]
A0A6J1IF22	5.9e-285	90.68	pentatricopeptide repeat-containing protein At1g33350 OS=Cucurbita maxima OX=366...	[more]
A0A6J1EQ76	2.2e-284	90.30	pentatricopeptide repeat-containing protein At1g33350 OS=Cucurbita moschata OX=3...	[more]
A0A6J1DQX1	3.9e-281	89.54	pentatricopeptide repeat-containing protein At1g33350 OS=Momordica charantia OX=...	[more]
A0A5A7T7Y7	2.7e-274	87.22	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of Clc08G01950.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G33350.1	4.7e-170	53.79	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G20540.1	1.1e-105	37.20	mitochondrial editing factor 21	[more]
AT5G59200.1	3.5e-104	37.23	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G66520.1	5.5e-102	36.61	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G08510.1	7.2e-102	37.10	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 5..154 e-value: 8.0E-8 score: 33.8
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 155..284 e-value: 1.2E-23 score: 86.1
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 293..533 e-value: 1.2E-40 score: 141.8
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 69..480
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 395..418 e-value: 7.3E-4 score: 17.5 coord: 179..209 e-value: 3.3E-8 score: 31.2 coord: 321..349 e-value: 0.0013 score: 16.8 coord: 357..390 e-value: 0.0017 score: 16.4
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 321..349 e-value: 6.7E-4 score: 19.7 coord: 179..208 e-value: 1.6E-9 score: 37.3 coord: 395..418 e-value: 0.0084 score: 16.3 coord: 211..237 e-value: 6.8E-4 score: 19.7 coord: 357..385 e-value: 0.048 score: 13.9 coord: 77..105 e-value: 0.059 score: 13.7 coord: 292..314 e-value: 0.45 score: 10.9
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 177..211 score: 12.232868
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 74..108 score: 8.966401
None	No IPR available	PANTHER	PTHR47924:SF11	SUBFAMILY NOT NAMED	coord: 2..526
None	No IPR available	PANTHER	PTHR47924	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 2..526

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Clc08G01950	Clc08G01950	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Clc08G01950.2-exon	Clc08G01950.2-exon-ClcChr08:3724695..3724853	exon
Clc08G01950.2-exon	Clc08G01950.2-exon-ClcChr08:3725073..3725149	exon
Clc08G01950.2-exon	Clc08G01950.2-exon-ClcChr08:3725250..3726825	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Clc08G01950.2-cds	Clc08G01950.2-cds-ClcChr08:3724695..3724853	CDS
Clc08G01950.2-cds	Clc08G01950.2-cds-ClcChr08:3725073..3725149	CDS
Clc08G01950.2-cds	Clc08G01950.2-cds-ClcChr08:3725250..3726825	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Clc08G01950.2	Clc08G01950.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding