Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAAAGTAGAAGCGGAATCCAAAGACGAAGCAATGAGATCCAAAACCGCCGTTCGTTGTGCAAAAGCAGCTTTTCTTCTTTCTTCGCTCAAATCCTCCCAAAATCGCCACCTCAAAGCCACTGTCGATCAACAAGCCAAGGTTCTCAATTACAATTTACGATCACTATCTGCCCTAGCTTGTGGATAGCGTTCTGGTTTATATGATTCGCGATTTTGAAAAATTAAAACGTCAATTACCTTTCAGGAGAAAGAGATGCTGAGGAAAGCTGTGGGAGATTTGAAGATCGAGTTGGTTAGGGAGCGTCTGAGGAATAAGAGGATCAAACTCTGTGGTTTCATGGAATTTGTTCTTCAGCTCCTGATGGTTATCTCTCTTTCGAGCTTCTTCCTTTTTGTTGCCTTCAAATTTGTCTGA
mRNA sequence
ATGGCGAAAGTAGAAGCGGAATCCAAAGACGAAGCAATGAGATCCAAAACCGCCGTTCGTTGTGCAAAAGCAGCTTTTCTTCTTTCTTCGCTCAAATCCTCCCAAAATCGCCACCTCAAAGCCACTGTCGATCAACAAGCCAAGGAGAAAGAGATGCTGAGGAAAGCTGTGGGAGATTTGAAGATCGAGTTGGTTAGGGAGCGTCTGAGGAATAAGAGGATCAAACTCTGTGGTTTCATGGAATTTGTTCTTCAGCTCCTGATGGTTATCTCTCTTTCGAGCTTCTTCCTTTTTGTTGCCTTCAAATTTGTCTGA
Coding sequence (CDS)
ATGGCGAAAGTAGAAGCGGAATCCAAAGACGAAGCAATGAGATCCAAAACCGCCGTTCGTTGTGCAAAAGCAGCTTTTCTTCTTTCTTCGCTCAAATCCTCCCAAAATCGCCACCTCAAAGCCACTGTCGATCAACAAGCCAAGGAGAAAGAGATGCTGAGGAAAGCTGTGGGAGATTTGAAGATCGAGTTGGTTAGGGAGCGTCTGAGGAATAAGAGGATCAAACTCTGTGGTTTCATGGAATTTGTTCTTCAGCTCCTGATGGTTATCTCTCTTTCGAGCTTCTTCCTTTTTGTTGCCTTCAAATTTGTCTGA
Protein sequence
MAKVEAESKDEAMRSKTAVRCAKAAFLLSSLKSSQNRHLKATVDQQAKEKEMLRKAVGDLKIELVRERLRNKRIKLCGFMEFVLQLLMVISLSSFFLFVAFKFV
Homology
BLAST of Cla97C11G221310 vs. NCBI nr
Match:
KAA0038606.1 (putative Retrotransposon-derived protein PEG10 [Cucumis melo var. makuwa] >TYK31205.1 putative Retrotransposon-derived protein PEG10 [Cucumis melo var. makuwa])
HSP 1 Score: 148.3 bits (373), Expect = 3.7e-32
Identity = 87/105 (82.86%), Postives = 94/105 (89.52%), Query Frame = 0
Query: 1 MAKVEAESKDEAMR-SKTAVRCAKAAFLLSSLKSSQNRHLKATVDQQAKEKEMLRKAVGD 60
M VEAESKDEAMR SKTA+RCAKAAFLLSSLKSSQNR L+AT +QAKE++MLRK VGD
Sbjct: 1 MENVEAESKDEAMRGSKTAIRCAKAAFLLSSLKSSQNRQLRATAHEQAKERKMLRKTVGD 60
Query: 61 LKIELVRERLRNKRIKLCGFMEFVLQLLMVISLSSFFLFVAFKFV 105
LKI+L RERLRNKRIKLCG MEFVLQLL+VISLSS LFVAFKFV
Sbjct: 61 LKIQLARERLRNKRIKLCGLMEFVLQLLLVISLSSLSLFVAFKFV 105
BLAST of Cla97C11G221310 vs. NCBI nr
Match:
XP_022940284.1 (uncharacterized protein LOC111445952 [Cucurbita moschata] >XP_023524781.1 uncharacterized protein LOC111788615 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 146.4 bits (368), Expect = 1.4e-31
Identity = 83/104 (79.81%), Postives = 92/104 (88.46%), Query Frame = 0
Query: 1 MAKVEAESKDEAMRSKTAVRCAKAAFLLSSLKSSQNRHLKATVDQQAKEKEMLRKAVGDL 60
M VEAES+DEAMRSKTA RCAKAAFL+SS KS QNR+L+A+VD+QAKEKE LRK VGDL
Sbjct: 1 MEGVEAESRDEAMRSKTAFRCAKAAFLISSFKSFQNRNLRASVDEQAKEKERLRKVVGDL 60
Query: 61 KIELVRERLRNKRIKLCGFMEFVLQLLMVISLSSFFLFVAFKFV 105
KIEL ER RNKRIKLCG MEFVLQLL+VISLSSFFLF+AFK +
Sbjct: 61 KIELAMERRRNKRIKLCGLMEFVLQLLLVISLSSFFLFIAFKSI 104
BLAST of Cla97C11G221310 vs. NCBI nr
Match:
KAG7031715.1 (hypothetical protein SDJN02_05756, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 144.1 bits (362), Expect = 7.0e-31
Identity = 81/104 (77.88%), Postives = 92/104 (88.46%), Query Frame = 0
Query: 1 MAKVEAESKDEAMRSKTAVRCAKAAFLLSSLKSSQNRHLKATVDQQAKEKEMLRKAVGDL 60
M VEAES+DEAMRSKTA RCAKAAFL+SS KS QNR+L+A+VD++AKEKE LRK VGDL
Sbjct: 1 MEGVEAESRDEAMRSKTAFRCAKAAFLISSFKSLQNRNLRASVDEEAKEKERLRKVVGDL 60
Query: 61 KIELVRERLRNKRIKLCGFMEFVLQLLMVISLSSFFLFVAFKFV 105
KIEL ER RN+RIKLCG MEFVLQLL+VISLSSFFLF+AFK +
Sbjct: 61 KIELAMERRRNRRIKLCGLMEFVLQLLLVISLSSFFLFIAFKSI 104
BLAST of Cla97C11G221310 vs. NCBI nr
Match:
XP_022138206.1 (uncharacterized protein LOC111009432 [Momordica charantia])
HSP 1 Score: 143.7 bits (361), Expect = 9.1e-31
Identity = 79/102 (77.45%), Postives = 91/102 (89.22%), Query Frame = 0
Query: 1 MAKVEAESKDEAMRSKTAVRCAKAAFLLSSLKSSQNRHLKATVDQQAKEKEMLRKAVGDL 60
M KVEAES+DEAMRS+TA RCAKAAF+LSSLKSSQN +L+ATV + KEKE LRK +GDL
Sbjct: 1 MEKVEAESRDEAMRSRTAFRCAKAAFVLSSLKSSQNHYLRATVYEIVKEKEKLRKTLGDL 60
Query: 61 KIELVRERLRNKRIKLCGFMEFVLQLLMVISLSSFFLFVAFK 103
K+EL RERLRNKRIKLCG MEFVLQ+L+VI+LSSFF F+AFK
Sbjct: 61 KVELARERLRNKRIKLCGLMEFVLQILLVITLSSFFFFIAFK 102
BLAST of Cla97C11G221310 vs. NCBI nr
Match:
XP_011652624.1 (uncharacterized protein LOC105435036 [Cucumis sativus] >KGN60336.1 hypothetical protein Csa_001987 [Cucumis sativus])
HSP 1 Score: 139.4 bits (350), Expect = 1.7e-29
Identity = 81/102 (79.41%), Postives = 91/102 (89.22%), Query Frame = 0
Query: 1 MAKVEAESKDEAMR-SKTAVRCAKAAFLLSSLKSSQNRHLKATVDQQAKEKEMLRKAVGD 60
M VEAE+K+EAMR SKTA+RCAKAAFLLSSLKSSQNR L+ATV +QAKEK+ML K VGD
Sbjct: 1 MEDVEAETKNEAMRGSKTAIRCAKAAFLLSSLKSSQNRQLRATVHEQAKEKKMLGKTVGD 60
Query: 61 LKIELVRERLRNKRIKLCGFMEFVLQLLMVISLSSFFLFVAF 102
LKI+L RER+RNKRIKLCG MEFVLQLL+V+SLSS FLF AF
Sbjct: 61 LKIQLARERVRNKRIKLCGLMEFVLQLLLVLSLSSLFLFAAF 102
BLAST of Cla97C11G221310 vs. ExPASy TrEMBL
Match:
A0A5D3E7E0 (Putative Retrotransposon-derived protein PEG10 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004900 PE=4 SV=1)
HSP 1 Score: 148.3 bits (373), Expect = 1.8e-32
Identity = 87/105 (82.86%), Postives = 94/105 (89.52%), Query Frame = 0
Query: 1 MAKVEAESKDEAMR-SKTAVRCAKAAFLLSSLKSSQNRHLKATVDQQAKEKEMLRKAVGD 60
M VEAESKDEAMR SKTA+RCAKAAFLLSSLKSSQNR L+AT +QAKE++MLRK VGD
Sbjct: 1 MENVEAESKDEAMRGSKTAIRCAKAAFLLSSLKSSQNRQLRATAHEQAKERKMLRKTVGD 60
Query: 61 LKIELVRERLRNKRIKLCGFMEFVLQLLMVISLSSFFLFVAFKFV 105
LKI+L RERLRNKRIKLCG MEFVLQLL+VISLSS LFVAFKFV
Sbjct: 61 LKIQLARERLRNKRIKLCGLMEFVLQLLLVISLSSLSLFVAFKFV 105
BLAST of Cla97C11G221310 vs. ExPASy TrEMBL
Match:
A0A6J1FJM5 (uncharacterized protein LOC111445952 OS=Cucurbita moschata OX=3662 GN=LOC111445952 PE=4 SV=1)
HSP 1 Score: 146.4 bits (368), Expect = 6.8e-32
Identity = 83/104 (79.81%), Postives = 92/104 (88.46%), Query Frame = 0
Query: 1 MAKVEAESKDEAMRSKTAVRCAKAAFLLSSLKSSQNRHLKATVDQQAKEKEMLRKAVGDL 60
M VEAES+DEAMRSKTA RCAKAAFL+SS KS QNR+L+A+VD+QAKEKE LRK VGDL
Sbjct: 1 MEGVEAESRDEAMRSKTAFRCAKAAFLISSFKSFQNRNLRASVDEQAKEKERLRKVVGDL 60
Query: 61 KIELVRERLRNKRIKLCGFMEFVLQLLMVISLSSFFLFVAFKFV 105
KIEL ER RNKRIKLCG MEFVLQLL+VISLSSFFLF+AFK +
Sbjct: 61 KIELAMERRRNKRIKLCGLMEFVLQLLLVISLSSFFLFIAFKSI 104
BLAST of Cla97C11G221310 vs. ExPASy TrEMBL
Match:
A0A6J1C920 (uncharacterized protein LOC111009432 OS=Momordica charantia OX=3673 GN=LOC111009432 PE=4 SV=1)
HSP 1 Score: 143.7 bits (361), Expect = 4.4e-31
Identity = 79/102 (77.45%), Postives = 91/102 (89.22%), Query Frame = 0
Query: 1 MAKVEAESKDEAMRSKTAVRCAKAAFLLSSLKSSQNRHLKATVDQQAKEKEMLRKAVGDL 60
M KVEAES+DEAMRS+TA RCAKAAF+LSSLKSSQN +L+ATV + KEKE LRK +GDL
Sbjct: 1 MEKVEAESRDEAMRSRTAFRCAKAAFVLSSLKSSQNHYLRATVYEIVKEKEKLRKTLGDL 60
Query: 61 KIELVRERLRNKRIKLCGFMEFVLQLLMVISLSSFFLFVAFK 103
K+EL RERLRNKRIKLCG MEFVLQ+L+VI+LSSFF F+AFK
Sbjct: 61 KVELARERLRNKRIKLCGLMEFVLQILLVITLSSFFFFIAFK 102
BLAST of Cla97C11G221310 vs. ExPASy TrEMBL
Match:
A0A0A0LJY1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G895820 PE=4 SV=1)
HSP 1 Score: 139.4 bits (350), Expect = 8.3e-30
Identity = 81/102 (79.41%), Postives = 91/102 (89.22%), Query Frame = 0
Query: 1 MAKVEAESKDEAMR-SKTAVRCAKAAFLLSSLKSSQNRHLKATVDQQAKEKEMLRKAVGD 60
M VEAE+K+EAMR SKTA+RCAKAAFLLSSLKSSQNR L+ATV +QAKEK+ML K VGD
Sbjct: 1 MEDVEAETKNEAMRGSKTAIRCAKAAFLLSSLKSSQNRQLRATVHEQAKEKKMLGKTVGD 60
Query: 61 LKIELVRERLRNKRIKLCGFMEFVLQLLMVISLSSFFLFVAF 102
LKI+L RER+RNKRIKLCG MEFVLQLL+V+SLSS FLF AF
Sbjct: 61 LKIQLARERVRNKRIKLCGLMEFVLQLLLVLSLSSLFLFAAF 102
BLAST of Cla97C11G221310 vs. ExPASy TrEMBL
Match:
A0A6N2LGP1 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS226933 PE=4 SV=1)
HSP 1 Score: 105.1 bits (261), Expect = 1.7e-19
Identity = 58/97 (59.79%), Postives = 76/97 (78.35%), Query Frame = 0
Query: 7 ESKDEAMRSKTAVRCAKAAFLLSSLKSSQNRHLKATVDQQAKEKEMLRKA----VGDLKI 66
ESKDE ++++ A+RCAKAA LLS LKS NRHL ++D Q +EKEML K +GDLK+
Sbjct: 8 ESKDERLKAQVAIRCAKAAILLSKLKSFPNRHLTTSIDDQGEEKEMLIKTMVREIGDLKM 67
Query: 67 ELVRERLRNKRIKLCGFMEFVLQLLMVISLSSFFLFV 100
ELVRERL+NKRIKLCG ME +LQ++ V+S+S+F L +
Sbjct: 68 ELVRERLKNKRIKLCGLMEVILQVVTVLSISTFLLVI 104
BLAST of Cla97C11G221310 vs. TAIR 10
Match:
AT1G78172.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )
HSP 1 Score: 59.3 bits (142), Expect = 2.1e-09
Identity = 40/92 (43.48%), Postives = 58/92 (63.04%), Query Frame = 0
Query: 8 SKDEAMRSKTAVRCAKAAFLLSSLKSSQNRHLKATVDQ--QAKEKEMLRKAVGDLKIELV 67
SKDE R TA+RCA+A LL SL SS+ T+D + +EK R+ + DL+ +L
Sbjct: 3 SKDEFSRDLTAIRCARATMLLYSLASSR------TIDSAGEKQEKGETRREIEDLRRKLT 62
Query: 68 RERLRNKRIKLCGFMEFVLQLLMVISLSSFFL 98
+++ RIKLCG ME +L + +V+ LS+FFL
Sbjct: 63 MVKIKMNRIKLCGLMELLLLVFLVLLLSTFFL 88
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0038606.1 | 3.7e-32 | 82.86 | putative Retrotransposon-derived protein PEG10 [Cucumis melo var. makuwa] >TYK31... | [more] |
XP_022940284.1 | 1.4e-31 | 79.81 | uncharacterized protein LOC111445952 [Cucurbita moschata] >XP_023524781.1 unchar... | [more] |
KAG7031715.1 | 7.0e-31 | 77.88 | hypothetical protein SDJN02_05756, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_022138206.1 | 9.1e-31 | 77.45 | uncharacterized protein LOC111009432 [Momordica charantia] | [more] |
XP_011652624.1 | 1.7e-29 | 79.41 | uncharacterized protein LOC105435036 [Cucumis sativus] >KGN60336.1 hypothetical ... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3E7E0 | 1.8e-32 | 82.86 | Putative Retrotransposon-derived protein PEG10 OS=Cucumis melo var. makuwa OX=11... | [more] |
A0A6J1FJM5 | 6.8e-32 | 79.81 | uncharacterized protein LOC111445952 OS=Cucurbita moschata OX=3662 GN=LOC1114459... | [more] |
A0A6J1C920 | 4.4e-31 | 77.45 | uncharacterized protein LOC111009432 OS=Momordica charantia OX=3673 GN=LOC111009... | [more] |
A0A0A0LJY1 | 8.3e-30 | 79.41 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G895820 PE=4 SV=1 | [more] |
A0A6N2LGP1 | 1.7e-19 | 59.79 | Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS226933 PE=4 SV=... | [more] |
Match Name | E-value | Identity | Description | |
AT1G78172.1 | 2.1e-09 | 43.48 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |